Clone Name | FLbaf96b03 |
---|---|
Clone Library Name | barley_pub |
>Q255P5:LPXB_CHLFF Lipid-A-disaccharide synthase - Chlamydophila felis (strain| Fe/C-56) Length = 625 Score = 35.4 bits (80), Expect = 0.44 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 20/74 (27%) Frame = +3 Query: 258 MTGCVVLFPVAFTFFITW---------------WFVQFVDGFFSPLY-----AKIGVDIF 377 + GC+ LF + FFI W W V F+ GF + LY + + + Sbjct: 142 IAGCIGLFTFSSRFFIQWCHLEINNRSTLPALFWLVSFIGGFLAFLYFIRTGDPVNIISY 201 Query: 378 GLGFLTSLAFIFLV 419 G G L SLA + ++ Sbjct: 202 GCGLLPSLANLLII 215
>P27780:CUP8_DROME Pupal cuticle protein Edg-84A precursor - Drosophila melanogaster| (Fruit fly) Length = 188 Score = 34.7 bits (78), Expect = 0.76 Identities = 23/74 (31%), Positives = 31/74 (41%) Frame = -3 Query: 1087 TSCTPAVHRS*HFGPVSKHREKQHVPYNSIPGHRYDASVQLVHHVPVSNLDILHVTNEQQ 908 + + VHRS F PV H HV +++ P H + + HHVPV + H Sbjct: 131 SQASAVVHRS--FAPVVHHAPVTHVVHHAAPAHSF-----VSHHVPVLKTTVHH------ 177 Query: 907 WSPIHSFAIHPHVI 866 A HPH I Sbjct: 178 -------AHHPHAI 184
>Q5NVB9:ZDH13_PONPY Probable palmitoyltransferase ZDHHC13 - Pongo pygmaeus (Orangutan)| Length = 622 Score = 33.5 bits (75), Expect = 1.7 Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Frame = +3 Query: 276 LFPVAFTFFITWWFVQFVDGFFSPLYAKIGVDIFGLGFLTSLAFIFLVG-----IFVSSW 440 LF + IT W V ++ F S + G + L FLTSL FLVG +++ Sbjct: 292 LFLLLMLSVITMWAVGYILDFNSDSWLLKGCLLVTLFFLTSLFPRFLVGYKNLVYLPTAF 351 Query: 441 VGSTVFWV-GEWFIKKMP 491 + S+VFW+ WFI P Sbjct: 352 LLSSVFWIFMTWFILFFP 369
>Q49409:Y277_MYCGE Uncharacterized protein MG277 - Mycoplasma genitalium| Length = 970 Score = 33.5 bits (75), Expect = 1.7 Identities = 20/94 (21%), Positives = 43/94 (45%), Gaps = 4/94 (4%) Frame = +3 Query: 243 VSRKFMTGCVVLFPVAFTFFITWWFVQFVDGFFSPLYAKIGVDIFGLGFLTSLAFIFLVG 422 VS ++ C++ + VA+ F+ G F+ +Y + + + F++L Sbjct: 772 VSLLYLAYCLIRYGVAYCLSYLVSFILLCSGLFAVMYLTNYLFSIDQSTIQLITFVYLFW 831 Query: 423 IFVSSWVGSTVFWV-GEWF---IKKMPFVKHIYS 512 +F ++ V T W WF +K F+K++++ Sbjct: 832 LFFAAKVSQTTTWTYFYWFKRSLKDKVFIKNLFN 865
>Q4R690:ZDH13_MACFA Probable palmitoyltransferase ZDHHC13 - Macaca fascicularis (Crab| eating macaque) (Cynomolgus monkey) Length = 622 Score = 33.1 bits (74), Expect = 2.2 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Frame = +3 Query: 276 LFPVAFTFFITWWFVQFVDGFFSPLYAKIGVDIFGLGFLTSLAFIFLVG-----IFVSSW 440 LF + IT W V ++ F S + G + L FLTSL FLVG +++ Sbjct: 292 LFLLLMLSVITMWAVGYILDFNSDSWLLKGCLLVTLFFLTSLFPRFLVGYKNLIYLPTAF 351 Query: 441 VGSTVFWV-GEWFIKKMP 491 + S++FW+ WFI P Sbjct: 352 LLSSIFWIFMTWFILFFP 369
>Q8IUH4:ZDH13_HUMAN Probable palmitoyltransferase ZDHHC13 - Homo sapiens (Human)| Length = 622 Score = 33.1 bits (74), Expect = 2.2 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Frame = +3 Query: 276 LFPVAFTFFITWWFVQFVDGFFSPLYAKIGVDIFGLGFLTSLAFIFLVG-----IFVSSW 440 LF + IT W + ++ F S + G + L FLTSL FLVG +++ Sbjct: 292 LFLLLMLSVITMWAIGYILDFNSDSWLLKGCLLVTLFFLTSLFPRFLVGYKNLVYLPTAF 351 Query: 441 VGSTVFWV-GEWFIKKMP 491 + S+VFW+ WFI P Sbjct: 352 LLSSVFWIFMTWFILFFP 369
>Q9CWU2:ZDH13_MOUSE Probable palmitoyltransferase ZDHHC13 - Mus musculus (Mouse)| Length = 622 Score = 32.7 bits (73), Expect = 2.9 Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 6/78 (7%) Frame = +3 Query: 276 LFPVAFTFFITWWFVQFVDGFFSPLYAKIGVDIFGLGFLTSLAFIFLVG-----IFVSSW 440 LF + IT W V ++ F S + G + L FLTSL FLVG + + Sbjct: 292 LFLLLILSMITLWAVGYILDFNSDSWLLKGCLLVALFFLTSLFPRFLVGYKNLVYLPTVF 351 Query: 441 VGSTVFWV-GEWFIKKMP 491 + S++FW+ WFI P Sbjct: 352 LLSSIFWIFMTWFILFFP 369
>P79920:NDF4_XENLA Neurogenic differentiation factor 4 - Xenopus laevis (African clawed| frog) Length = 315 Score = 32.7 bits (73), Expect = 2.9 Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = -3 Query: 1042 VSKHREKQHVPYNSIPGHRYDASVQLVHHVPVSNLDILHV-TNEQQWSPIHSFAIHPHVI 866 + KH EK H+ +S+ GH Y+ + P N+D+ H+ + P+ ++ H + Sbjct: 174 LDKHEEKSHICDSSLTGHTYNYQSPGLPSPPYGNIDVHHLHLKPSSFKPVMDPSVVTHTL 233
>Q3ECH0:FB75_ARATH F-box protein At1g67130 - Arabidopsis thaliana (Mouse-ear cress)| Length = 155 Score = 31.6 bits (70), Expect = 6.4 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 1/92 (1%) Frame = +3 Query: 465 GEWFIKKMPFVKHIYSASKQVSTAISPDQNTTAFKEVAIIRHPRVG-EYAFGFITSTVVL 641 GEW P K+ Y S S ++ D + K I +H G YAFG I V Sbjct: 68 GEWSFYSSPQPKNPYEKS---SLEVAADFH---MKLSEIKQHQHHGTSYAFGLIYLRTVW 121 Query: 642 QTDKGDEELCSVYVPTNHLYIGDIFLLNSEEI 737 + +G+ E+C + P+ Y+ L E + Sbjct: 122 MSKEGNYEVCVICKPSTGQYMRSYHLNRQESL 153 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 180,101,737 Number of extensions: 4053415 Number of successful extensions: 11305 Number of sequences better than 10.0: 9 Number of HSP's gapped: 11275 Number of HSP's successfully gapped: 9 Length of query: 382 Length of database: 100,686,439 Length adjustment: 115 Effective length of query: 267 Effective length of database: 69,142,514 Effective search space: 18461051238 Effective search space used: 18461051238 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)