ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf96a19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK101400:Os02g0606000 | 370 | e-102 | 2 | AK060085:Os02g0606000 | 370 | e-102 | 3 | AK058232:Os02g0606000 | 370 | e-102 | 4 | AK064114:Os04g0493300 | 270 | 1e-72 | 5 | AK062853:Os04g0493300 | 270 | 1e-72 | 6 | AK058218:Os02g0662100 | 31 | 1.5 | 7 | Os04g0311300:Os04g0311300 | 30 | 2.5 | 8 | AK120734:Os11g0682500 | 30 | 2.5 | 9 | AK069463:Os10g0429700 | 30 | 2.5 | 10 | AF145726:Os06g0140700 | 30 | 4.2 | 11 | AY206864:Os06g0140700 | 30 | 4.2 | 12 | AK105150:Os06g0140700 | 30 | 4.2 | 13 | AK072370:Os11g0656500 | 29 | 5.5 | 14 | AK119334:Os04g0480500 | 28 | 9.4 |
|---|
>AK101400:Os02g0606000 | Length = 250 Score = 370 bits (950), Expect = e-102 Identities = 183/253 (72%), Positives = 207/253 (81%) Frame = +1 Query: 190 MSYFQATTCKPHTGLIVDRPITGLGKTCRLLPVPQYSIRSHPLGFRKLDKHIYPRLVLVA 369 MSYF TCKP++GLIVDRP+ GLG+T RLL PQYS+ +H + F KL K +YPRLVLVA Sbjct: 1 MSYF---TCKPNSGLIVDRPVAGLGRTGRLLSHPQYSLTTHSVRFPKLQKQVYPRLVLVA 57 Query: 370 ASHTRLTPVCASSGKGNPELDNDPFMDHLKKAMADAKKPRPIQDVLKEKFSKLREQAXXX 549 AS +L P+CASSGK NPE +NDPFM+ LKKAM DAKKPRPIQD+LKE+ +KLREQ Sbjct: 58 ASQKKLPPLCASSGKVNPEAENDPFMESLKKAMDDAKKPRPIQDLLKEQIAKLREQGSGG 117 Query: 550 XXXXXXXXXXXXXXXXPEDESFKESLDEVVQVILATVAFILVYIHIIRGEELYRLARDYT 729 PEDESFKESLDE+VQVILATVAFILVYIHIIRGEELYRLARDYT Sbjct: 118 GGGNRNRRGGSGDSGGPEDESFKESLDELVQVILATVAFILVYIHIIRGEELYRLARDYT 177 Query: 730 RYLVTGKRTARLKRSMQQWRSFSEKFTQNEGSQEERYERPTTSEPMWWQQPQKFVHLMEE 909 RYLVTGKRTARLKR+MQ+WR+FSE F Q+EGSQE++YER TS+P WWQQPQKFVHLMEE Sbjct: 178 RYLVTGKRTARLKRAMQKWRNFSESFMQSEGSQEDQYERAATSKPTWWQQPQKFVHLMEE 237 Query: 910 LCRGNWRPHAQKS 948 LCRGNWRPHAQ+S Sbjct: 238 LCRGNWRPHAQES 250
>AK060085:Os02g0606000 | Length = 250 Score = 370 bits (950), Expect = e-102 Identities = 183/253 (72%), Positives = 207/253 (81%) Frame = +1 Query: 190 MSYFQATTCKPHTGLIVDRPITGLGKTCRLLPVPQYSIRSHPLGFRKLDKHIYPRLVLVA 369 MSYF TCKP++GLIVDRP+ GLG+T RLL PQYS+ +H + F KL K +YPRLVLVA Sbjct: 1 MSYF---TCKPNSGLIVDRPVAGLGRTGRLLSHPQYSLTTHSVRFPKLQKQVYPRLVLVA 57 Query: 370 ASHTRLTPVCASSGKGNPELDNDPFMDHLKKAMADAKKPRPIQDVLKEKFSKLREQAXXX 549 AS +L P+CASSGK NPE +NDPFM+ LKKAM DAKKPRPIQD+LKE+ +KLREQ Sbjct: 58 ASQKKLPPLCASSGKVNPEAENDPFMESLKKAMDDAKKPRPIQDLLKEQIAKLREQGSGG 117 Query: 550 XXXXXXXXXXXXXXXXPEDESFKESLDEVVQVILATVAFILVYIHIIRGEELYRLARDYT 729 PEDESFKESLDE+VQVILATVAFILVYIHIIRGEELYRLARDYT Sbjct: 118 GGGNRNRRGGSGDSGGPEDESFKESLDELVQVILATVAFILVYIHIIRGEELYRLARDYT 177 Query: 730 RYLVTGKRTARLKRSMQQWRSFSEKFTQNEGSQEERYERPTTSEPMWWQQPQKFVHLMEE 909 RYLVTGKRTARLKR+MQ+WR+FSE F Q+EGSQE++YER TS+P WWQQPQKFVHLMEE Sbjct: 178 RYLVTGKRTARLKRAMQKWRNFSESFMQSEGSQEDQYERAATSKPTWWQQPQKFVHLMEE 237 Query: 910 LCRGNWRPHAQKS 948 LCRGNWRPHAQ+S Sbjct: 238 LCRGNWRPHAQES 250
>AK058232:Os02g0606000 | Length = 250 Score = 370 bits (950), Expect = e-102 Identities = 183/253 (72%), Positives = 207/253 (81%) Frame = +1 Query: 190 MSYFQATTCKPHTGLIVDRPITGLGKTCRLLPVPQYSIRSHPLGFRKLDKHIYPRLVLVA 369 MSYF TCKP++GLIVDRP+ GLG+T RLL PQYS+ +H + F KL K +YPRLVLVA Sbjct: 1 MSYF---TCKPNSGLIVDRPVAGLGRTGRLLSHPQYSLTTHSVRFPKLQKQVYPRLVLVA 57 Query: 370 ASHTRLTPVCASSGKGNPELDNDPFMDHLKKAMADAKKPRPIQDVLKEKFSKLREQAXXX 549 AS +L P+CASSGK NPE +NDPFM+ LKKAM DAKKPRPIQD+LKE+ +KLREQ Sbjct: 58 ASQKKLPPLCASSGKVNPEAENDPFMESLKKAMDDAKKPRPIQDLLKEQIAKLREQGSGG 117 Query: 550 XXXXXXXXXXXXXXXXPEDESFKESLDEVVQVILATVAFILVYIHIIRGEELYRLARDYT 729 PEDESFKESLDE+VQVILATVAFILVYIHIIRGEELYRLARDYT Sbjct: 118 GGGNRNRRGGSGDSGGPEDESFKESLDELVQVILATVAFILVYIHIIRGEELYRLARDYT 177 Query: 730 RYLVTGKRTARLKRSMQQWRSFSEKFTQNEGSQEERYERPTTSEPMWWQQPQKFVHLMEE 909 RYLVTGKRTARLKR+MQ+WR+FSE F Q+EGSQE++YER TS+P WWQQPQKFVHLMEE Sbjct: 178 RYLVTGKRTARLKRAMQKWRNFSESFMQSEGSQEDQYERAATSKPTWWQQPQKFVHLMEE 237 Query: 910 LCRGNWRPHAQKS 948 LCRGNWRPHAQ+S Sbjct: 238 LCRGNWRPHAQES 250
>AK064114:Os04g0493300 | Length = 326 Score = 270 bits (690), Expect = 1e-72 Identities = 148/255 (58%), Positives = 178/255 (69%), Gaps = 1/255 (0%) Frame = +1 Query: 187 TMSYFQATTCKPHTGLIVDRPITGLGKTCRLLPVPQYSIRSHPLGFRKLDKHIYPRLVLV 366 +MSYFQATT KPH G+IVD+ GLG TC+LL + + S+ F KL + +YPRL+LV Sbjct: 76 SMSYFQATTYKPHNGIIVDKVAIGLGSTCKLLH--ERAKCSYSNRFIKLQEQVYPRLLLV 133 Query: 367 AASHTRLTPVCASSGKGNPELDNDPF-MDHLKKAMADAKKPRPIQDVLKEKFSKLREQAX 543 AA H R+ PV ASSGKGN E NDPF M+ L KA+A KK PIQD+L ++ SK+R Sbjct: 134 AACHNRIGPVYASSGKGNSERVNDPFSMESLNKAIAGTKKQWPIQDMLIDQISKIRGSGS 193 Query: 544 XXXXXXXXXXXXXXXXXXPEDESFKESLDEVVQVILATVAFILVYIHIIRGEELYRLARD 723 EDES ESL E+VQV+LAT+AFIL+YIHIIRGEELYRLARD Sbjct: 194 GGNGGGNKNSHEGSGGGS-EDESLTESLYEMVQVLLATIAFILMYIHIIRGEELYRLARD 252 Query: 724 YTRYLVTGKRTARLKRSMQQWRSFSEKFTQNEGSQEERYERPTTSEPMWWQQPQKFVHLM 903 YTRYLVTGKRT+RLKR+M W +F E T + QE +ER +TSEPMWWQQP KFVH + Sbjct: 253 YTRYLVTGKRTSRLKRAMLNWHNFCEGITNKDSVQESTFER-STSEPMWWQQPLKFVHRI 311 Query: 904 EELCRGNWRPHAQKS 948 EEL RG +RPHAQ+S Sbjct: 312 EELYRGYFRPHAQES 326
>AK062853:Os04g0493300 | Length = 316 Score = 270 bits (690), Expect = 1e-72 Identities = 148/255 (58%), Positives = 178/255 (69%), Gaps = 1/255 (0%) Frame = +1 Query: 187 TMSYFQATTCKPHTGLIVDRPITGLGKTCRLLPVPQYSIRSHPLGFRKLDKHIYPRLVLV 366 +MSYFQATT KPH G+IVD+ GLG TC+LL + + S+ F KL + +YPRL+LV Sbjct: 66 SMSYFQATTYKPHNGIIVDKVAIGLGSTCKLLH--ERAKCSYSNRFIKLQEQVYPRLLLV 123 Query: 367 AASHTRLTPVCASSGKGNPELDNDPF-MDHLKKAMADAKKPRPIQDVLKEKFSKLREQAX 543 AA H R+ PV ASSGKGN E NDPF M+ L KA+A KK PIQD+L ++ SK+R Sbjct: 124 AACHNRIGPVYASSGKGNSERVNDPFSMESLNKAIAGTKKQWPIQDMLIDQISKIRGSGS 183 Query: 544 XXXXXXXXXXXXXXXXXXPEDESFKESLDEVVQVILATVAFILVYIHIIRGEELYRLARD 723 EDES ESL E+VQV+LAT+AFIL+YIHIIRGEELYRLARD Sbjct: 184 GGNGGGNKNSHEGSGGGS-EDESLTESLYEMVQVLLATIAFILMYIHIIRGEELYRLARD 242 Query: 724 YTRYLVTGKRTARLKRSMQQWRSFSEKFTQNEGSQEERYERPTTSEPMWWQQPQKFVHLM 903 YTRYLVTGKRT+RLKR+M W +F E T + QE +ER +TSEPMWWQQP KFVH + Sbjct: 243 YTRYLVTGKRTSRLKRAMLNWHNFCEGITNKDSVQESTFER-STSEPMWWQQPLKFVHRI 301 Query: 904 EELCRGNWRPHAQKS 948 EEL RG +RPHAQ+S Sbjct: 302 EELYRGYFRPHAQES 316
>AK058218:Os02g0662100 | Length = 128 Score = 31.2 bits (69), Expect = 1.5 Identities = 17/63 (26%), Positives = 27/63 (42%) Frame = -3 Query: 1049 CKTFTPAKQPVPISPTHPSYSFKCQKRTVERQN*DFCACGRQFPLQSSSIR*TNF*GCCH 870 C + P +P+ PSY+ KC K ++ F AC L S+ + + CC Sbjct: 23 CGKYCPTPSTPSTTPSTPSYNTKCPKNALK-----FAACADVLGLVSAEVGQPPYEPCCG 77 Query: 869 HIG 861 +G Sbjct: 78 VLG 80
>Os04g0311300:Os04g0311300 | Length = 2135 Score = 30.4 bits (67), Expect = 2.5 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = +2 Query: 752 ELPG*SAPCNNGAVSQRNSHKTRALRKSGMKGQPLRNQCGGNSLKS-LFILWRSFAEGIG 928 EL +P NG V +RN R S +K + L G ++ + +++L RS ++GIG Sbjct: 653 ELTAPYSPQQNGVVERRNQSVVGTAR-SMLKAKGLPGMFWGEAINTAVYLLNRSSSKGIG 711 Query: 929 VHMHRSLSSGVP 964 +L +GVP Sbjct: 712 GKTPYALWNGVP 723
>AK120734:Os11g0682500 | Length = 1457 Score = 30.4 bits (67), Expect = 2.5 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = +2 Query: 752 ELPG*SAPCNNGAVSQRNSHKTRALRKSGMKGQPLRNQCGGNSLKS-LFILWRSFAEGIG 928 EL +P NG V +RN R S +K + L G ++ + +++L RS ++GIG Sbjct: 690 ELTAPYSPQQNGVVERRNQSVVGTAR-SMLKAKGLPGMFWGEAINTAVYLLNRSSSKGIG 748 Query: 929 VHMHRSLSSGVP 964 +L +GVP Sbjct: 749 GKTPYALWNGVP 760
>AK069463:Os10g0429700 | Length = 908 Score = 30.4 bits (67), Expect = 2.5 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = +2 Query: 752 ELPG*SAPCNNGAVSQRNSHKTRALRKSGMKGQPLRNQCGGNSLKS-LFILWRSFAEGIG 928 EL +P NG V +RN R S +K + L G ++ + +++L RS ++GIG Sbjct: 690 ELTAPYSPQQNGVVERRNQSVVGTAR-SMLKAKGLPGMFWGEAINTAVYLLNRSSSKGIG 748 Query: 929 VHMHRSLSSGVP 964 +L +GVP Sbjct: 749 GKTPYALWNGVP 760
>AF145726:Os06g0140700 | Length = 287 Score = 29.6 bits (65), Expect = 4.2 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +1 Query: 91 TPPPTAGVQPSSSAAVTLEVCP 156 +P + +QPSSSAA TL +CP Sbjct: 187 SPASASAMQPSSSAAATLTMCP 208
>AY206864:Os06g0140700 | Length = 308 Score = 29.6 bits (65), Expect = 4.2 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +1 Query: 91 TPPPTAGVQPSSSAAVTLEVCP 156 +P + +QPSSSAA TL +CP Sbjct: 208 SPASASAMQPSSSAAATLTMCP 229
>AK105150:Os06g0140700 | Length = 308 Score = 29.6 bits (65), Expect = 4.2 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +1 Query: 91 TPPPTAGVQPSSSAAVTLEVCP 156 +P + +QPSSSAA TL +CP Sbjct: 208 SPASASAMQPSSSAAATLTMCP 229
>AK072370:Os11g0656500 | Length = 1428 Score = 29.3 bits (64), Expect = 5.5 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = +2 Query: 752 ELPG*SAPCNNGAVSQRNSHKTRALRKSGMKGQPLRNQCGGNSLKS-LFILWRSFAEGIG 928 EL +P NG V +RN R S +K + L G ++ + +++L RS ++GIG Sbjct: 656 ELTAPYSPQQNGVVERRNQSVVGTAR-SMLKVKGLPGMFWGEAINTAVYLLNRSSSKGIG 714 Query: 929 VHMHRSLSSGVP 964 +L +GVP Sbjct: 715 GKTPYALWNGVP 726
>AK119334:Os04g0480500 | Length = 1078 Score = 28.5 bits (62), Expect = 9.4 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 9/66 (13%) Frame = -2 Query: 840 IPLFLRALVLCEFL*ETAPLLHGALQ----PGSSLTG-----NQISSVVPRKAVQLLPSD 688 +P FL +L EF+ + L G LQ P SLT NQ++ +PR QL+ Sbjct: 465 VPAFLFSLPRLEFISLMSNNLAGPLQEFDNPSPSLTSVYLNYNQLNGSIPRSFFQLMGLQ 524 Query: 687 NMDVHK 670 +D+ + Sbjct: 525 TLDLSR 530 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 34,445,480 Number of extensions: 816679 Number of successful extensions: 2598 Number of sequences better than 10.0: 14 Number of HSP's gapped: 2586 Number of HSP's successfully gapped: 14 Length of query: 385 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 283 Effective length of database: 11,315,673 Effective search space: 3202335459 Effective search space used: 3202335459 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
