Clone Name | FLbaf96a19 |
---|---|
Clone Library Name | barley_pub |
>P20188:YT44_STRFR Hypothetical 44.4 kDa protein in transposon Tn4556 - Streptomyces| fradiae Length = 395 Score = 33.1 bits (74), Expect = 2.2 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 9/56 (16%) Frame = -1 Query: 1132 KILNKPETKIHAKEQRT-------TPSAPSRNSIHVKP--LRQPSNRYPSHLHTHH 992 +++++P ++H Q+ P+ R ++H P LRQP+ RYP H++ H Sbjct: 179 RVVHRPRREVHGGGQQRRQAASVGVPAQQRRLAVHPVPGQLRQPARRYPRHINGAH 234
>Q9Z272:GIT1_RAT ARF GTPase-activating protein GIT1 - Rattus norvegicus (Rat)| Length = 770 Score = 32.3 bits (72), Expect = 3.8 Identities = 19/77 (24%), Positives = 38/77 (49%) Frame = +1 Query: 679 IHIIRGEELYRLARDYTRYLVTGKRTARLKRSMQQWRSFSEKFTQNEGSQEERYERPTTS 858 +H+ G LYR+ + + VT ++ L S Q+ + K +++ E YE + Sbjct: 556 VHVPAG--LYRIRKGVSASSVTFTPSSPLLSSSQEGSRHASKLSRHGSGAESDYENTQSG 613 Query: 859 EPMWWQQPQKFVHLMEE 909 EP+ + ++F+ L +E Sbjct: 614 EPLLGLEGKRFLELSKE 630
>P81392:MYB06_ANTMA Myb-related protein 306 - Antirrhinum majus (Garden snapdragon)| Length = 316 Score = 32.0 bits (71), Expect = 5.0 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = -1 Query: 982 SVKKGQWNARTKTSVHVDANSLCKAPP*DEQTFEAVATTLVPKWLAFHTALP 827 SV KGQW R +T +H+ +LC A D+ + ++T PK T P Sbjct: 139 SVSKGQWERRLQTDIHMAKQALCDALSLDKTS----SSTDDPKLSTVQTTQP 186
>Q3J4D4:GCSP_RHOS4 Glycine dehydrogenase [decarboxylating] - Rhodobacter sphaeroides| (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) Length = 956 Score = 31.6 bits (70), Expect = 6.5 Identities = 20/44 (45%), Positives = 24/44 (54%) Frame = +3 Query: 756 CPAEALHATMAQFLREIHTKRGLSGRAV*KANHFGTNVVATASK 887 C A+AL A MA F H RGL RA+ + H T +ATA K Sbjct: 332 CTAQALLAVMASFYAVFHGPRGL--RAIAERVHLNTVRLATALK 373
>P07692:ACES_TORMA Acetylcholinesterase precursor - Torpedo marmorata (Marbled electric| ray) Length = 590 Score = 31.6 bits (70), Expect = 6.5 Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 4/103 (3%) Frame = +1 Query: 742 TGKRTARLKRSMQQWRSFSEKFTQNEG-SQEERYERPTTSEPMWWQQPQKFVHLMEELCR 918 T + A +R M W +F++ NE SQE ++ P++ + QKF+ L E + Sbjct: 483 TAEEEALSRRIMHYWATFAKTGNPNEPHSQESKW-------PLFTTKEQKFIDLNTEPIK 535 Query: 919 GNWRPHAQKS*FWRSTVLF*HLKEYDGCVGEM---GTGCLAGV 1038 + R Q FW L C GE+ GT G+ Sbjct: 536 VHQRLRVQMCVFWNQ--FLPKLLNATACDGELSSSGTSSSKGI 576
>P04058:ACES_TORCA Acetylcholinesterase precursor - Torpedo californica (Pacific| electric ray) Length = 586 Score = 31.6 bits (70), Expect = 6.5 Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 4/103 (3%) Frame = +1 Query: 742 TGKRTARLKRSMQQWRSFSEKFTQNEG-SQEERYERPTTSEPMWWQQPQKFVHLMEELCR 918 T + A +R M W +F++ NE SQE ++ P++ + QKF+ L E + Sbjct: 480 TAEEEALSRRIMHYWATFAKTGNPNEPHSQESKW-------PLFTTKEQKFIDLNTEPMK 532 Query: 919 GNWRPHAQKS*FWRSTVLF*HLKEYDGCVGEM---GTGCLAGV 1038 + R Q FW L C GE+ GT G+ Sbjct: 533 VHQRLRVQMCVFWNQ--FLPKLLNATACDGELSSSGTSSSKGI 573
>Q9FMX3:STP11_ARATH Sugar transport protein 11 - Arabidopsis thaliana (Mouse-ear cress)| Length = 514 Score = 31.2 bits (69), Expect = 8.5 Identities = 11/32 (34%), Positives = 20/32 (62%) Frame = +3 Query: 1023 LLGWRKGFTWMEFLDGADGVVLCSLACIFVSG 1118 ++GW+ GF L G D ++ +L C++V+G Sbjct: 370 MIGWKFGFNGEGNLSGVDADIILALICLYVAG 401 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 209,132,675 Number of extensions: 4781925 Number of successful extensions: 13614 Number of sequences better than 10.0: 7 Number of HSP's gapped: 13595 Number of HSP's successfully gapped: 7 Length of query: 385 Length of database: 100,686,439 Length adjustment: 115 Effective length of query: 270 Effective length of database: 69,142,514 Effective search space: 18668478780 Effective search space used: 18668478780 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)