ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf96a19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P20188:YT44_STRFR Hypothetical 44.4 kDa protein in transposon Tn... 33 2.2
2Q9Z272:GIT1_RAT ARF GTPase-activating protein GIT1 - Rattus norv... 32 3.8
3P81392:MYB06_ANTMA Myb-related protein 306 - Antirrhinum majus (... 32 5.0
4Q3J4D4:GCSP_RHOS4 Glycine dehydrogenase [decarboxylating] - Rhod... 32 6.5
5P07692:ACES_TORMA Acetylcholinesterase precursor - Torpedo marmo... 32 6.5
6P04058:ACES_TORCA Acetylcholinesterase precursor - Torpedo calif... 32 6.5
7Q9FMX3:STP11_ARATH Sugar transport protein 11 - Arabidopsis thal... 31 8.5

>P20188:YT44_STRFR Hypothetical 44.4 kDa protein in transposon Tn4556 - Streptomyces|
            fradiae
          Length = 395
 Score = 33.1 bits (74), Expect = 2.2
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 9/56 (16%)
 Frame = -1

Query: 1132 KILNKPETKIHAKEQRT-------TPSAPSRNSIHVKP--LRQPSNRYPSHLHTHH 992
            +++++P  ++H   Q+         P+   R ++H  P  LRQP+ RYP H++  H
Sbjct: 179  RVVHRPRREVHGGGQQRRQAASVGVPAQQRRLAVHPVPGQLRQPARRYPRHINGAH 234



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>Q9Z272:GIT1_RAT ARF GTPase-activating protein GIT1 - Rattus norvegicus (Rat)|
          Length = 770

 Score = 32.3 bits (72), Expect = 3.8
 Identities = 19/77 (24%), Positives = 38/77 (49%)
 Frame = +1

Query: 679 IHIIRGEELYRLARDYTRYLVTGKRTARLKRSMQQWRSFSEKFTQNEGSQEERYERPTTS 858
           +H+  G  LYR+ +  +   VT   ++ L  S Q+    + K +++    E  YE   + 
Sbjct: 556 VHVPAG--LYRIRKGVSASSVTFTPSSPLLSSSQEGSRHASKLSRHGSGAESDYENTQSG 613

Query: 859 EPMWWQQPQKFVHLMEE 909
           EP+   + ++F+ L +E
Sbjct: 614 EPLLGLEGKRFLELSKE 630



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>P81392:MYB06_ANTMA Myb-related protein 306 - Antirrhinum majus (Garden snapdragon)|
          Length = 316

 Score = 32.0 bits (71), Expect = 5.0
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -1

Query: 982 SVKKGQWNARTKTSVHVDANSLCKAPP*DEQTFEAVATTLVPKWLAFHTALP 827
           SV KGQW  R +T +H+   +LC A   D+ +    ++T  PK     T  P
Sbjct: 139 SVSKGQWERRLQTDIHMAKQALCDALSLDKTS----SSTDDPKLSTVQTTQP 186



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>Q3J4D4:GCSP_RHOS4 Glycine dehydrogenase [decarboxylating] - Rhodobacter sphaeroides|
           (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
          Length = 956

 Score = 31.6 bits (70), Expect = 6.5
 Identities = 20/44 (45%), Positives = 24/44 (54%)
 Frame = +3

Query: 756 CPAEALHATMAQFLREIHTKRGLSGRAV*KANHFGTNVVATASK 887
           C A+AL A MA F    H  RGL  RA+ +  H  T  +ATA K
Sbjct: 332 CTAQALLAVMASFYAVFHGPRGL--RAIAERVHLNTVRLATALK 373



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>P07692:ACES_TORMA Acetylcholinesterase precursor - Torpedo marmorata (Marbled electric|
            ray)
          Length = 590

 Score = 31.6 bits (70), Expect = 6.5
 Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
 Frame = +1

Query: 742  TGKRTARLKRSMQQWRSFSEKFTQNEG-SQEERYERPTTSEPMWWQQPQKFVHLMEELCR 918
            T +  A  +R M  W +F++    NE  SQE ++       P++  + QKF+ L  E  +
Sbjct: 483  TAEEEALSRRIMHYWATFAKTGNPNEPHSQESKW-------PLFTTKEQKFIDLNTEPIK 535

Query: 919  GNWRPHAQKS*FWRSTVLF*HLKEYDGCVGEM---GTGCLAGV 1038
             + R   Q   FW        L     C GE+   GT    G+
Sbjct: 536  VHQRLRVQMCVFWNQ--FLPKLLNATACDGELSSSGTSSSKGI 576



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>P04058:ACES_TORCA Acetylcholinesterase precursor - Torpedo californica (Pacific|
            electric ray)
          Length = 586

 Score = 31.6 bits (70), Expect = 6.5
 Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
 Frame = +1

Query: 742  TGKRTARLKRSMQQWRSFSEKFTQNEG-SQEERYERPTTSEPMWWQQPQKFVHLMEELCR 918
            T +  A  +R M  W +F++    NE  SQE ++       P++  + QKF+ L  E  +
Sbjct: 480  TAEEEALSRRIMHYWATFAKTGNPNEPHSQESKW-------PLFTTKEQKFIDLNTEPMK 532

Query: 919  GNWRPHAQKS*FWRSTVLF*HLKEYDGCVGEM---GTGCLAGV 1038
             + R   Q   FW        L     C GE+   GT    G+
Sbjct: 533  VHQRLRVQMCVFWNQ--FLPKLLNATACDGELSSSGTSSSKGI 573



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>Q9FMX3:STP11_ARATH Sugar transport protein 11 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 514

 Score = 31.2 bits (69), Expect = 8.5
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +3

Query: 1023 LLGWRKGFTWMEFLDGADGVVLCSLACIFVSG 1118
            ++GW+ GF     L G D  ++ +L C++V+G
Sbjct: 370  MIGWKFGFNGEGNLSGVDADIILALICLYVAG 401


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 209,132,675
Number of extensions: 4781925
Number of successful extensions: 13614
Number of sequences better than 10.0: 7
Number of HSP's gapped: 13595
Number of HSP's successfully gapped: 7
Length of query: 385
Length of database: 100,686,439
Length adjustment: 115
Effective length of query: 270
Effective length of database: 69,142,514
Effective search space: 18668478780
Effective search space used: 18668478780
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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