ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf98d18 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT837748.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA129A20, full insert sequence Length = 1432 Score = 369 bits (186), Expect = 2e-98 Identities = 303/342 (88%) Strand = Plus / Plus Query: 264 ggggagcggcggcccctgttccagaggctatggacggaggaggatgagatcgtgatccta 323 |||||||||||||| ||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 297 ggggagcggcggccgctgttccagcggctgtggacggaggaggacgagatcgtgatcctg 356 Query: 324 cgcgcgttcgccgagtttacggcgcagcggggcacggcgttcgcgtcccaccagtacgac 383 || |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||| Sbjct: 357 cgagcgttcgcggagttcacggcgcagcgcgggacggcgttcgcgtcgcaccagtacgac 416 Query: 384 acggaacccttctacgaggagatgcgccgccgcctccagctcgatttctccaagagccag 443 ||||| || ||||||||||| ||||| || |||||||||||||| ||||||||||||||| Sbjct: 417 acggacccgttctacgaggacatgcggcggcgcctccagctcgacttctccaagagccag 476 Query: 444 ctcgccgagaagcttcgccgccttaagcgcaagtaccgtaactgtgtcgagcgcctccgt 503 |||| ||||||||| |||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct: 477 ctcgtcgagaagctccgccgcctcaagcgcaagtaccgcaactgcgtcgaccgcctccgc 536 Query: 504 tgctccggcaacactttctcctttcgctcccctcacgagcaggccgtcttcgagatcgct 563 | ||||| | | |||||||| ||||| || |||||||||||| ||||||||||||| Sbjct: 537 gccaccggccagtccttctccttccgctcgccgcacgagcaggccatcttcgagatcgcc 596 Query: 564 cgcaacatctggcgcccctcctccgacaagcacggccgcgac 605 ||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 597 cgcggcatctggcgccccacctccgacaagcacggccgcgac 638 Score = 129 bits (65), Expect = 3e-26 Identities = 101/113 (89%) Strand = Plus / Plus Query: 1008 ggggagaagtggaggcagcagcgaattctggagctggaggtgtacctgcggcggatcgac 1067 ||||||| ||||||||||||||| || |||||||||||||||||||| ||||| |||||| Sbjct: 1077 ggggagaggtggaggcagcagcggatcctggagctggaggtgtacctccggcgcatcgac 1136 Query: 1068 ctgctgcaggacgaggtgaagtcagcactggaggagctaaagtccgcgccgcc 1120 |||||||||||| |||||| | | || ||||||||||| |||||| ||||||| Sbjct: 1137 ctgctgcaggaccaggtgaggacggcgctggaggagctcaagtccacgccgcc 1189 Score = 93.7 bits (47), Expect = 2e-15 Identities = 68/75 (90%) Strand = Plus / Plus Query: 113 cggcgccgctgcgtcctcctccttccctgacgccgacgcctatggcaacggggactctga 172 |||||| || || |||||||||||||| |||||||||| |||||||||||||||||| || Sbjct: 119 cggcgcggccgcctcctcctccttccccgacgccgacgtctatggcaacggggactcgga 178 Query: 173 agacatcgacttccc 187 |||||||||||||| Sbjct: 179 cgacatcgacttccc 193 Score = 52.0 bits (26), Expect = 0.006 Identities = 26/26 (100%) Strand = Plus / Plus Query: 702 cgccgcggccgccgcaggcgcacggc 727 |||||||||||||||||||||||||| Sbjct: 744 cgccgcggccgccgcaggcgcacggc 769 Score = 42.1 bits (21), Expect = 5.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 93 gtcgacgaccactccgccgccggcgccgc 121 |||||||||| ||||||||||| |||||| Sbjct: 84 gtcgacgacccctccgccgccgccgccgc 112 Score = 42.1 bits (21), Expect = 5.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 866 gaacacggagagcagcttcctgacgcctctgttcaaggaaatggtccgtgccatgct 922 |||| ||||| || || ||||| |||| ||||||||||| ||||| || |||||||| Sbjct: 962 gaacgcggagggcggcatcctggcgccgctgttcaaggagatggtgcgcgccatgct 1018
>dbj|AK243208.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100042A05, full insert sequence Length = 1477 Score = 369 bits (186), Expect = 2e-98 Identities = 303/342 (88%) Strand = Plus / Plus Query: 264 ggggagcggcggcccctgttccagaggctatggacggaggaggatgagatcgtgatccta 323 |||||||||||||| ||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 339 ggggagcggcggccgctgttccagcggctgtggacggaggaggacgagatcgtgatcctg 398 Query: 324 cgcgcgttcgccgagtttacggcgcagcggggcacggcgttcgcgtcccaccagtacgac 383 || |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||| Sbjct: 399 cgagcgttcgcggagttcacggcgcagcgcgggacggcgttcgcgtcgcaccagtacgac 458 Query: 384 acggaacccttctacgaggagatgcgccgccgcctccagctcgatttctccaagagccag 443 ||||| || ||||||||||| ||||| || |||||||||||||| ||||||||||||||| Sbjct: 459 acggacccgttctacgaggacatgcggcggcgcctccagctcgacttctccaagagccag 518 Query: 444 ctcgccgagaagcttcgccgccttaagcgcaagtaccgtaactgtgtcgagcgcctccgt 503 |||| ||||||||| |||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct: 519 ctcgtcgagaagctccgccgcctcaagcgcaagtaccgcaactgcgtcgaccgcctccgc 578 Query: 504 tgctccggcaacactttctcctttcgctcccctcacgagcaggccgtcttcgagatcgct 563 | ||||| | | |||||||| ||||| || |||||||||||| ||||||||||||| Sbjct: 579 gccaccggccagtccttctccttccgctcgccgcacgagcaggccatcttcgagatcgcc 638 Query: 564 cgcaacatctggcgcccctcctccgacaagcacggccgcgac 605 ||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 639 cgcggcatctggcgccccacctccgacaagcacggccgcgac 680 Score = 129 bits (65), Expect = 3e-26 Identities = 101/113 (89%) Strand = Plus / Plus Query: 1008 ggggagaagtggaggcagcagcgaattctggagctggaggtgtacctgcggcggatcgac 1067 ||||||| ||||||||||||||| || |||||||||||||||||||| ||||| |||||| Sbjct: 1119 ggggagaggtggaggcagcagcggatcctggagctggaggtgtacctccggcgcatcgac 1178 Query: 1068 ctgctgcaggacgaggtgaagtcagcactggaggagctaaagtccgcgccgcc 1120 |||||||||||| |||||| | | || ||||||||||| |||||| ||||||| Sbjct: 1179 ctgctgcaggaccaggtgaggacggcgctggaggagctcaagtccacgccgcc 1231 Score = 93.7 bits (47), Expect = 2e-15 Identities = 68/75 (90%) Strand = Plus / Plus Query: 113 cggcgccgctgcgtcctcctccttccctgacgccgacgcctatggcaacggggactctga 172 |||||| || || |||||||||||||| |||||||||| |||||||||||||||||| || Sbjct: 161 cggcgcggccgcctcctcctccttccccgacgccgacgtctatggcaacggggactcgga 220 Query: 173 agacatcgacttccc 187 |||||||||||||| Sbjct: 221 cgacatcgacttccc 235 Score = 52.0 bits (26), Expect = 0.006 Identities = 26/26 (100%) Strand = Plus / Plus Query: 702 cgccgcggccgccgcaggcgcacggc 727 |||||||||||||||||||||||||| Sbjct: 786 cgccgcggccgccgcaggcgcacggc 811 Score = 42.1 bits (21), Expect = 5.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 93 gtcgacgaccactccgccgccggcgccgc 121 |||||||||| ||||||||||| |||||| Sbjct: 126 gtcgacgacccctccgccgccgccgccgc 154 Score = 42.1 bits (21), Expect = 5.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 866 gaacacggagagcagcttcctgacgcctctgttcaaggaaatggtccgtgccatgct 922 |||| ||||| || || ||||| |||| ||||||||||| ||||| || |||||||| Sbjct: 1004 gaacgcggagggcggcatcctggcgccgctgttcaaggagatggtgcgcgccatgct 1060
>ref|NM_001056732.1| Oryza sativa (japonica cultivar-group) Os03g0370200 (Os03g0370200) mRNA, complete cds Length = 3773 Score = 369 bits (186), Expect = 2e-98 Identities = 303/342 (88%) Strand = Plus / Minus Query: 264 ggggagcggcggcccctgttccagaggctatggacggaggaggatgagatcgtgatccta 323 |||||||||||||| ||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 3485 ggggagcggcggccgctgttccagcggctgtggacggaggaggacgagatcgtgatcctg 3426 Query: 324 cgcgcgttcgccgagtttacggcgcagcggggcacggcgttcgcgtcccaccagtacgac 383 || |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||| Sbjct: 3425 cgagcgttcgcggagttcacggcgcagcgcgggacggcgttcgcgtcgcaccagtacgac 3366 Query: 384 acggaacccttctacgaggagatgcgccgccgcctccagctcgatttctccaagagccag 443 ||||| || ||||||||||| ||||| || |||||||||||||| ||||||||||||||| Sbjct: 3365 acggacccgttctacgaggacatgcggcggcgcctccagctcgacttctccaagagccag 3306 Query: 444 ctcgccgagaagcttcgccgccttaagcgcaagtaccgtaactgtgtcgagcgcctccgt 503 |||| ||||||||| |||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct: 3305 ctcgtcgagaagctccgccgcctcaagcgcaagtaccgcaactgcgtcgaccgcctccgc 3246 Query: 504 tgctccggcaacactttctcctttcgctcccctcacgagcaggccgtcttcgagatcgct 563 | ||||| | | |||||||| ||||| || |||||||||||| ||||||||||||| Sbjct: 3245 gccaccggccagtccttctccttccgctcgccgcacgagcaggccatcttcgagatcgcc 3186 Query: 564 cgcaacatctggcgcccctcctccgacaagcacggccgcgac 605 ||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 3185 cgcggcatctggcgccccacctccgacaagcacggccgcgac 3144 Score = 93.7 bits (47), Expect = 2e-15 Identities = 68/75 (90%) Strand = Plus / Minus Query: 113 cggcgccgctgcgtcctcctccttccctgacgccgacgcctatggcaacggggactctga 172 |||||| || || |||||||||||||| |||||||||| |||||||||||||||||| || Sbjct: 3663 cggcgcggccgcctcctcctccttccccgacgccgacgtctatggcaacggggactcgga 3604 Query: 173 agacatcgacttccc 187 |||||||||||||| Sbjct: 3603 cgacatcgacttccc 3589 Score = 87.7 bits (44), Expect = 1e-13 Identities = 59/64 (92%) Strand = Plus / Minus Query: 1008 ggggagaagtggaggcagcagcgaattctggagctggaggtgtacctgcggcggatcgac 1067 ||||||| ||||||||||||||| || |||||||||||||||||||| ||||| |||||| Sbjct: 2705 ggggagaggtggaggcagcagcggatcctggagctggaggtgtacctccggcgcatcgac 2646 Query: 1068 ctgc 1071 |||| Sbjct: 2645 ctgc 2642 Score = 52.0 bits (26), Expect = 0.006 Identities = 26/26 (100%) Strand = Plus / Minus Query: 702 cgccgcggccgccgcaggcgcacggc 727 |||||||||||||||||||||||||| Sbjct: 3038 cgccgcggccgccgcaggcgcacggc 3013 Score = 42.1 bits (21), Expect = 5.6 Identities = 48/57 (84%) Strand = Plus / Minus Query: 866 gaacacggagagcagcttcctgacgcctctgttcaaggaaatggtccgtgccatgct 922 |||| ||||| || || ||||| |||| ||||||||||| ||||| || |||||||| Sbjct: 2820 gaacgcggagggcggcatcctggcgccgctgttcaaggagatggtgcgcgccatgct 2764 Score = 42.1 bits (21), Expect = 5.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 93 gtcgacgaccactccgccgccggcgccgc 121 |||||||||| ||||||||||| |||||| Sbjct: 3698 gtcgacgacccctccgccgccgccgccgc 3670
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 369 bits (186), Expect = 2e-98 Identities = 303/342 (88%) Strand = Plus / Minus Query: 264 ggggagcggcggcccctgttccagaggctatggacggaggaggatgagatcgtgatccta 323 |||||||||||||| ||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 14372433 ggggagcggcggccgctgttccagcggctgtggacggaggaggacgagatcgtgatcctg 14372374 Query: 324 cgcgcgttcgccgagtttacggcgcagcggggcacggcgttcgcgtcccaccagtacgac 383 || |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||| Sbjct: 14372373 cgagcgttcgcggagttcacggcgcagcgcgggacggcgttcgcgtcgcaccagtacgac 14372314 Query: 384 acggaacccttctacgaggagatgcgccgccgcctccagctcgatttctccaagagccag 443 ||||| || ||||||||||| ||||| || |||||||||||||| ||||||||||||||| Sbjct: 14372313 acggacccgttctacgaggacatgcggcggcgcctccagctcgacttctccaagagccag 14372254 Query: 444 ctcgccgagaagcttcgccgccttaagcgcaagtaccgtaactgtgtcgagcgcctccgt 503 |||| ||||||||| |||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct: 14372253 ctcgtcgagaagctccgccgcctcaagcgcaagtaccgcaactgcgtcgaccgcctccgc 14372194 Query: 504 tgctccggcaacactttctcctttcgctcccctcacgagcaggccgtcttcgagatcgct 563 | ||||| | | |||||||| ||||| || |||||||||||| ||||||||||||| Sbjct: 14372193 gccaccggccagtccttctccttccgctcgccgcacgagcaggccatcttcgagatcgcc 14372134 Query: 564 cgcaacatctggcgcccctcctccgacaagcacggccgcgac 605 ||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 14372133 cgcggcatctggcgccccacctccgacaagcacggccgcgac 14372092 Score = 129 bits (65), Expect = 3e-26 Identities = 101/113 (89%) Strand = Plus / Minus Query: 1008 ggggagaagtggaggcagcagcgaattctggagctggaggtgtacctgcggcggatcgac 1067 ||||||| ||||||||||||||| || |||||||||||||||||||| ||||| |||||| Sbjct: 14371653 ggggagaggtggaggcagcagcggatcctggagctggaggtgtacctccggcgcatcgac 14371594 Query: 1068 ctgctgcaggacgaggtgaagtcagcactggaggagctaaagtccgcgccgcc 1120 |||||||||||| |||||| | | || ||||||||||| |||||| ||||||| Sbjct: 14371593 ctgctgcaggaccaggtgaggacggcgctggaggagctcaagtccacgccgcc 14371541 Score = 93.7 bits (47), Expect = 2e-15 Identities = 68/75 (90%) Strand = Plus / Minus Query: 113 cggcgccgctgcgtcctcctccttccctgacgccgacgcctatggcaacggggactctga 172 |||||| || || |||||||||||||| |||||||||| |||||||||||||||||| || Sbjct: 14372611 cggcgcggccgcctcctcctccttccccgacgccgacgtctatggcaacggggactcgga 14372552 Query: 173 agacatcgacttccc 187 |||||||||||||| Sbjct: 14372551 cgacatcgacttccc 14372537 Score = 52.0 bits (26), Expect = 0.006 Identities = 26/26 (100%) Strand = Plus / Minus Query: 702 cgccgcggccgccgcaggcgcacggc 727 |||||||||||||||||||||||||| Sbjct: 14371986 cgccgcggccgccgcaggcgcacggc 14371961 Score = 42.1 bits (21), Expect = 5.6 Identities = 48/57 (84%) Strand = Plus / Minus Query: 866 gaacacggagagcagcttcctgacgcctctgttcaaggaaatggtccgtgccatgct 922 |||| ||||| || || ||||| |||| ||||||||||| ||||| || |||||||| Sbjct: 14371768 gaacgcggagggcggcatcctggcgccgctgttcaaggagatggtgcgcgccatgct 14371712 Score = 42.1 bits (21), Expect = 5.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 93 gtcgacgaccactccgccgccggcgccgc 121 |||||||||| ||||||||||| |||||| Sbjct: 14372646 gtcgacgacccctccgccgccgccgccgc 14372618 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1254 aaatatatatatcaaaattgc 1274 ||||||||||||||||||||| Sbjct: 23339574 aaatatatatatcaaaattgc 23339554
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 369 bits (186), Expect = 2e-98 Identities = 303/342 (88%) Strand = Plus / Minus Query: 264 ggggagcggcggcccctgttccagaggctatggacggaggaggatgagatcgtgatccta 323 |||||||||||||| ||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 126687 ggggagcggcggccgctgttccagcggctgtggacggaggaggacgagatcgtgatcctg 126628 Query: 324 cgcgcgttcgccgagtttacggcgcagcggggcacggcgttcgcgtcccaccagtacgac 383 || |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||| Sbjct: 126627 cgagcgttcgcggagttcacggcgcagcgcgggacggcgttcgcgtcgcaccagtacgac 126568 Query: 384 acggaacccttctacgaggagatgcgccgccgcctccagctcgatttctccaagagccag 443 ||||| || ||||||||||| ||||| || |||||||||||||| ||||||||||||||| Sbjct: 126567 acggacccgttctacgaggacatgcggcggcgcctccagctcgacttctccaagagccag 126508 Query: 444 ctcgccgagaagcttcgccgccttaagcgcaagtaccgtaactgtgtcgagcgcctccgt 503 |||| ||||||||| |||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct: 126507 ctcgtcgagaagctccgccgcctcaagcgcaagtaccgcaactgcgtcgaccgcctccgc 126448 Query: 504 tgctccggcaacactttctcctttcgctcccctcacgagcaggccgtcttcgagatcgct 563 | ||||| | | |||||||| ||||| || |||||||||||| ||||||||||||| Sbjct: 126447 gccaccggccagtccttctccttccgctcgccgcacgagcaggccatcttcgagatcgcc 126388 Query: 564 cgcaacatctggcgcccctcctccgacaagcacggccgcgac 605 ||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 126387 cgcggcatctggcgccccacctccgacaagcacggccgcgac 126346 Score = 129 bits (65), Expect = 3e-26 Identities = 101/113 (89%) Strand = Plus / Minus Query: 1008 ggggagaagtggaggcagcagcgaattctggagctggaggtgtacctgcggcggatcgac 1067 ||||||| ||||||||||||||| || |||||||||||||||||||| ||||| |||||| Sbjct: 125907 ggggagaggtggaggcagcagcggatcctggagctggaggtgtacctccggcgcatcgac 125848 Query: 1068 ctgctgcaggacgaggtgaagtcagcactggaggagctaaagtccgcgccgcc 1120 |||||||||||| |||||| | | || ||||||||||| |||||| ||||||| Sbjct: 125847 ctgctgcaggaccaggtgaggacggcgctggaggagctcaagtccacgccgcc 125795 Score = 93.7 bits (47), Expect = 2e-15 Identities = 68/75 (90%) Strand = Plus / Minus Query: 113 cggcgccgctgcgtcctcctccttccctgacgccgacgcctatggcaacggggactctga 172 |||||| || || |||||||||||||| |||||||||| |||||||||||||||||| || Sbjct: 126865 cggcgcggccgcctcctcctccttccccgacgccgacgtctatggcaacggggactcgga 126806 Query: 173 agacatcgacttccc 187 |||||||||||||| Sbjct: 126805 cgacatcgacttccc 126791 Score = 52.0 bits (26), Expect = 0.006 Identities = 26/26 (100%) Strand = Plus / Minus Query: 702 cgccgcggccgccgcaggcgcacggc 727 |||||||||||||||||||||||||| Sbjct: 126240 cgccgcggccgccgcaggcgcacggc 126215 Score = 42.1 bits (21), Expect = 5.6 Identities = 48/57 (84%) Strand = Plus / Minus Query: 866 gaacacggagagcagcttcctgacgcctctgttcaaggaaatggtccgtgccatgct 922 |||| ||||| || || ||||| |||| ||||||||||| ||||| || |||||||| Sbjct: 126022 gaacgcggagggcggcatcctggcgccgctgttcaaggagatggtgcgcgccatgct 125966 Score = 42.1 bits (21), Expect = 5.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 93 gtcgacgaccactccgccgccggcgccgc 121 |||||||||| ||||||||||| |||||| Sbjct: 126900 gtcgacgacccctccgccgccgccgccgc 126872
>ref|NM_001066927.1| Oryza sativa (japonica cultivar-group) Os07g0636100 (Os07g0636100) mRNA, complete cds Length = 1296 Score = 309 bits (156), Expect = 2e-80 Identities = 270/308 (87%) Strand = Plus / Plus Query: 274 ggcccctgttccagaggctatggacggaggaggatgagatcgtgatcctacgcgcgttcg 333 |||| ||||||||| |||| |||||||||||||| |||||||||||||| |||| ||||| Sbjct: 266 ggccgctgttccagcggctgtggacggaggaggacgagatcgtgatcctccgcgggttcg 325 Query: 334 ccgagtttacggcgcagcggggcacggcgttcgcgtcccaccagtacgacacggaaccct 393 | ||||| || ||| ||| ||||||||||||||||| |||||||||||||| || |||| Sbjct: 326 cggagttcaccgcggcgcgcggcacggcgttcgcgtcgcaccagtacgacaccgacccct 385 Query: 394 tctacgaggagatgcgccgccgcctccagctcgatttctccaagagccagctcgccgaga 453 |||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 386 tctacgaggacatgcgcggccgcctccagctcggcttctccaagagccagctcgtcgaga 445 Query: 454 agcttcgccgccttaagcgcaagtaccgtaactgtgtcgagcgcctccgttgctccggca 513 |||| |||||||| |||||||||||||| ||||| ||| |||||||| | ||||||| Sbjct: 446 agctccgccgcctcaagcgcaagtaccgcaactgcgtctcccgcctccggggatccggca 505 Query: 514 acactttctcctttcgctcccctcacgagcaggccgtcttcgagatcgctcgcaacatct 573 | | |||||||| ||||| || |||||||||||| ||||||||||||| |||||||||| Sbjct: 506 gcgccttctccttccgctcgccgcacgagcaggccatcttcgagatcgcgcgcaacatct 565 Query: 574 ggcgcccc 581 |||||||| Sbjct: 566 ggcgcccc 573 Score = 69.9 bits (35), Expect = 2e-08 Identities = 74/87 (85%) Strand = Plus / Plus Query: 1002 atggagggggagaagtggaggcagcagcgaattctggagctggaggtgtacctgcggcgg 1061 ||||| |||||||| |||||| ||||||| || ||||||||||||| ||| || ||| Sbjct: 860 atggaaggggagaaatggaggaagcagcgtatattggagctggaggtatacttgaaacgg 919 Query: 1062 atcgacctgctgcaggacgaggtgaag 1088 ||||| |||||||||||| |||||||| Sbjct: 920 atcgagctgctgcaggaccaggtgaag 946
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 309 bits (156), Expect = 2e-80 Identities = 270/308 (87%) Strand = Plus / Plus Query: 274 ggcccctgttccagaggctatggacggaggaggatgagatcgtgatcctacgcgcgttcg 333 |||| ||||||||| |||| |||||||||||||| |||||||||||||| |||| ||||| Sbjct: 26359660 ggccgctgttccagcggctgtggacggaggaggacgagatcgtgatcctccgcgggttcg 26359719 Query: 334 ccgagtttacggcgcagcggggcacggcgttcgcgtcccaccagtacgacacggaaccct 393 | ||||| || ||| ||| ||||||||||||||||| |||||||||||||| || |||| Sbjct: 26359720 cggagttcaccgcggcgcgcggcacggcgttcgcgtcgcaccagtacgacaccgacccct 26359779 Query: 394 tctacgaggagatgcgccgccgcctccagctcgatttctccaagagccagctcgccgaga 453 |||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 26359780 tctacgaggacatgcgcggccgcctccagctcggcttctccaagagccagctcgtcgaga 26359839 Query: 454 agcttcgccgccttaagcgcaagtaccgtaactgtgtcgagcgcctccgttgctccggca 513 |||| |||||||| |||||||||||||| ||||| ||| |||||||| | ||||||| Sbjct: 26359840 agctccgccgcctcaagcgcaagtaccgcaactgcgtctcccgcctccggggatccggca 26359899 Query: 514 acactttctcctttcgctcccctcacgagcaggccgtcttcgagatcgctcgcaacatct 573 | | |||||||| ||||| || |||||||||||| ||||||||||||| |||||||||| Sbjct: 26359900 gcgccttctccttccgctcgccgcacgagcaggccatcttcgagatcgcgcgcaacatct 26359959 Query: 574 ggcgcccc 581 |||||||| Sbjct: 26359960 ggcgcccc 26359967 Score = 69.9 bits (35), Expect = 2e-08 Identities = 74/87 (85%) Strand = Plus / Plus Query: 1002 atggagggggagaagtggaggcagcagcgaattctggagctggaggtgtacctgcggcgg 1061 ||||| |||||||| |||||| ||||||| || ||||||||||||| ||| || ||| Sbjct: 26360433 atggaaggggagaaatggaggaagcagcgtatattggagctggaggtatacttgaaacgg 26360492 Query: 1062 atcgacctgctgcaggacgaggtgaag 1088 ||||| |||||||||||| |||||||| Sbjct: 26360493 atcgagctgctgcaggaccaggtgaag 26360519 Score = 50.1 bits (25), Expect = 0.023 Identities = 25/25 (100%) Strand = Plus / Plus Query: 96 gacgaccactccgccgccggcgccg 120 ||||||||||||||||||||||||| Sbjct: 1302372 gacgaccactccgccgccggcgccg 1302396 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 599 ccgcgaccccagcgccgccgac 620 |||||||||||||||||||||| Sbjct: 7078839 ccgcgaccccagcgccgccgac 7078818
>dbj|AP003749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_D11 Length = 109399 Score = 309 bits (156), Expect = 2e-80 Identities = 270/308 (87%) Strand = Plus / Plus Query: 274 ggcccctgttccagaggctatggacggaggaggatgagatcgtgatcctacgcgcgttcg 333 |||| ||||||||| |||| |||||||||||||| |||||||||||||| |||| ||||| Sbjct: 13900 ggccgctgttccagcggctgtggacggaggaggacgagatcgtgatcctccgcgggttcg 13959 Query: 334 ccgagtttacggcgcagcggggcacggcgttcgcgtcccaccagtacgacacggaaccct 393 | ||||| || ||| ||| ||||||||||||||||| |||||||||||||| || |||| Sbjct: 13960 cggagttcaccgcggcgcgcggcacggcgttcgcgtcgcaccagtacgacaccgacccct 14019 Query: 394 tctacgaggagatgcgccgccgcctccagctcgatttctccaagagccagctcgccgaga 453 |||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 14020 tctacgaggacatgcgcggccgcctccagctcggcttctccaagagccagctcgtcgaga 14079 Query: 454 agcttcgccgccttaagcgcaagtaccgtaactgtgtcgagcgcctccgttgctccggca 513 |||| |||||||| |||||||||||||| ||||| ||| |||||||| | ||||||| Sbjct: 14080 agctccgccgcctcaagcgcaagtaccgcaactgcgtctcccgcctccggggatccggca 14139 Query: 514 acactttctcctttcgctcccctcacgagcaggccgtcttcgagatcgctcgcaacatct 573 | | |||||||| ||||| || |||||||||||| ||||||||||||| |||||||||| Sbjct: 14140 gcgccttctccttccgctcgccgcacgagcaggccatcttcgagatcgcgcgcaacatct 14199 Query: 574 ggcgcccc 581 |||||||| Sbjct: 14200 ggcgcccc 14207 Score = 69.9 bits (35), Expect = 2e-08 Identities = 74/87 (85%) Strand = Plus / Plus Query: 1002 atggagggggagaagtggaggcagcagcgaattctggagctggaggtgtacctgcggcgg 1061 ||||| |||||||| |||||| ||||||| || ||||||||||||| ||| || ||| Sbjct: 14673 atggaaggggagaaatggaggaagcagcgtatattggagctggaggtatacttgaaacgg 14732 Query: 1062 atcgacctgctgcaggacgaggtgaag 1088 ||||| |||||||||||| |||||||| Sbjct: 14733 atcgagctgctgcaggaccaggtgaag 14759
>dbj|AK068356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146D06, full insert sequence Length = 1297 Score = 309 bits (156), Expect = 2e-80 Identities = 270/308 (87%) Strand = Plus / Plus Query: 274 ggcccctgttccagaggctatggacggaggaggatgagatcgtgatcctacgcgcgttcg 333 |||| ||||||||| |||| |||||||||||||| |||||||||||||| |||| ||||| Sbjct: 267 ggccgctgttccagcggctgtggacggaggaggacgagatcgtgatcctccgcgggttcg 326 Query: 334 ccgagtttacggcgcagcggggcacggcgttcgcgtcccaccagtacgacacggaaccct 393 | ||||| || ||| ||| ||||||||||||||||| |||||||||||||| || |||| Sbjct: 327 cggagttcaccgcggcgcgcggcacggcgttcgcgtcgcaccagtacgacaccgacccct 386 Query: 394 tctacgaggagatgcgccgccgcctccagctcgatttctccaagagccagctcgccgaga 453 |||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 387 tctacgaggacatgcgcggccgcctccagctcggcttctccaagagccagctcgtcgaga 446 Query: 454 agcttcgccgccttaagcgcaagtaccgtaactgtgtcgagcgcctccgttgctccggca 513 |||| |||||||| |||||||||||||| ||||| ||| |||||||| | ||||||| Sbjct: 447 agctccgccgcctcaagcgcaagtaccgcaactgcgtctcccgcctccggggatccggca 506 Query: 514 acactttctcctttcgctcccctcacgagcaggccgtcttcgagatcgctcgcaacatct 573 | | |||||||| ||||| || |||||||||||| ||||||||||||| |||||||||| Sbjct: 507 gcgccttctccttccgctcgccgcacgagcaggccatcttcgagatcgcgcgcaacatct 566 Query: 574 ggcgcccc 581 |||||||| Sbjct: 567 ggcgcccc 574 Score = 69.9 bits (35), Expect = 2e-08 Identities = 74/87 (85%) Strand = Plus / Plus Query: 1002 atggagggggagaagtggaggcagcagcgaattctggagctggaggtgtacctgcggcgg 1061 ||||| |||||||| |||||| ||||||| || ||||||||||||| ||| || ||| Sbjct: 861 atggaaggggagaaatggaggaagcagcgtatattggagctggaggtatacttgaaacgg 920 Query: 1062 atcgacctgctgcaggacgaggtgaag 1088 ||||| |||||||||||| |||||||| Sbjct: 921 atcgagctgctgcaggaccaggtgaag 947
>ref|NM_001049126.1| Oryza sativa (japonica cultivar-group) Os01g0249900 (Os01g0249900) mRNA, complete cds Length = 1209 Score = 105 bits (53), Expect = 4e-19 Identities = 107/125 (85%) Strand = Plus / Plus Query: 342 acggcgcagcggggcacggcgttcgcgtcccaccagtacgacacggaacccttctacgag 401 ||||||| ||||||||| |||||||||| |||||||||||||||| ||||||||||| Sbjct: 46 acggcgcggcggggcaccacgttcgcgtcgcaccagtacgacacggggcccttctacgac 105 Query: 402 gagatgcgccgccgcctccagctcgatttctccaagagccagctcgccgagaagcttcgc 461 ||||| || || |||||| |||| ||| ||||||||||||||| ||||||||| ||| Sbjct: 106 gagatccggcggcgcctctccttcgacttcaccaagagccagctcgtcgagaagctccgc 165 Query: 462 cgcct 466 ||||| Sbjct: 166 cgcct 170
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 105 bits (53), Expect = 4e-19 Identities = 107/125 (85%) Strand = Plus / Minus Query: 342 acggcgcagcggggcacggcgttcgcgtcccaccagtacgacacggaacccttctacgag 401 ||||||| ||||||||| |||||||||| |||||||||||||||| ||||||||||| Sbjct: 8234788 acggcgcggcggggcaccacgttcgcgtcgcaccagtacgacacggggcccttctacgac 8234729 Query: 402 gagatgcgccgccgcctccagctcgatttctccaagagccagctcgccgagaagcttcgc 461 ||||| || || |||||| |||| ||| ||||||||||||||| ||||||||| ||| Sbjct: 8234728 gagatccggcggcgcctctccttcgacttcaccaagagccagctcgtcgagaagctccgc 8234669 Query: 462 cgcct 466 ||||| Sbjct: 8234668 cgcct 8234664
>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0434D08 Length = 161266 Score = 105 bits (53), Expect = 4e-19 Identities = 107/125 (85%) Strand = Plus / Minus Query: 342 acggcgcagcggggcacggcgttcgcgtcccaccagtacgacacggaacccttctacgag 401 ||||||| ||||||||| |||||||||| |||||||||||||||| ||||||||||| Sbjct: 28719 acggcgcggcggggcaccacgttcgcgtcgcaccagtacgacacggggcccttctacgac 28660 Query: 402 gagatgcgccgccgcctccagctcgatttctccaagagccagctcgccgagaagcttcgc 461 ||||| || || |||||| |||| ||| ||||||||||||||| ||||||||| ||| Sbjct: 28659 gagatccggcggcgcctctccttcgacttcaccaagagccagctcgtcgagaagctccgc 28600 Query: 462 cgcct 466 ||||| Sbjct: 28599 cgcct 28595
>dbj|AK072886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149P13, full insert sequence Length = 1210 Score = 105 bits (53), Expect = 4e-19 Identities = 107/125 (85%) Strand = Plus / Plus Query: 342 acggcgcagcggggcacggcgttcgcgtcccaccagtacgacacggaacccttctacgag 401 ||||||| ||||||||| |||||||||| |||||||||||||||| ||||||||||| Sbjct: 47 acggcgcggcggggcaccacgttcgcgtcgcaccagtacgacacggggcccttctacgac 106 Query: 402 gagatgcgccgccgcctccagctcgatttctccaagagccagctcgccgagaagcttcgc 461 ||||| || || |||||| |||| ||| ||||||||||||||| ||||||||| ||| Sbjct: 107 gagatccggcggcgcctctccttcgacttcaccaagagccagctcgtcgagaagctccgc 166 Query: 462 cgcct 466 ||||| Sbjct: 167 cgcct 171
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Minus Query: 361 cgttcgcgtcccaccagtacgacacggaacccttctacgaggagatgcgc 410 |||||||||| ||||| ||| |||| || ||||| ||||||||||||||| Sbjct: 26113125 cgttcgcgtcgcaccaatacaacacagaccccttatacgaggagatgcgc 26113076 Score = 44.1 bits (22), Expect = 1.4 Identities = 31/34 (91%) Strand = Plus / Minus Query: 106 ccgccgccggcgccgctgcgtcctcctccttccc 139 ||||||||| |||||| |||||||||||||||| Sbjct: 10989813 ccgccgccgccgccgccacgtcctcctccttccc 10989780
>dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0048B08 Length = 146874 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Minus Query: 361 cgttcgcgtcccaccagtacgacacggaacccttctacgaggagatgcgc 410 |||||||||| ||||| ||| |||| || ||||| ||||||||||||||| Sbjct: 9952 cgttcgcgtcgcaccaatacaacacagaccccttatacgaggagatgcgc 9903
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Minus Query: 361 cgttcgcgtcccaccagtacgacacggaacccttctacgaggagatgcgc 410 |||||||||| ||||| ||| |||| || ||||| ||||||||||||||| Sbjct: 120571 cgttcgcgtcgcaccaatacaacacagaccccttatacgaggagatgcgc 120522
>ref|NM_001065341.1| Oryza sativa (japonica cultivar-group) Os07g0124700 (Os07g0124700) mRNA, partial cds Length = 1434 Score = 50.1 bits (25), Expect = 0.023 Identities = 25/25 (100%) Strand = Plus / Plus Query: 96 gacgaccactccgccgccggcgccg 120 ||||||||||||||||||||||||| Sbjct: 507 gacgaccactccgccgccggcgccg 531
>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0474G09 Length = 169511 Score = 50.1 bits (25), Expect = 0.023 Identities = 25/25 (100%) Strand = Plus / Plus Query: 96 gacgaccactccgccgccggcgccg 120 ||||||||||||||||||||||||| Sbjct: 67207 gacgaccactccgccgccggcgccg 67231
>dbj|AK109848.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-F05, full insert sequence Length = 1440 Score = 50.1 bits (25), Expect = 0.023 Identities = 25/25 (100%) Strand = Plus / Plus Query: 96 gacgaccactccgccgccggcgccg 120 ||||||||||||||||||||||||| Sbjct: 507 gacgaccactccgccgccggcgccg 531
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 48.1 bits (24), Expect = 0.090 Identities = 24/24 (100%) Strand = Plus / Plus Query: 61 ctccgatccgatccgatgcgatgc 84 |||||||||||||||||||||||| Sbjct: 17537427 ctccgatccgatccgatgcgatgc 17537450 Score = 44.1 bits (22), Expect = 1.4 Identities = 31/34 (91%) Strand = Plus / Minus Query: 101 ccactccgccgccggcgccgctgcgtcctcctcc 134 ||||||||||||||||||| | || ||||||||| Sbjct: 5185954 ccactccgccgccggcgccaccgcctcctcctcc 5185921 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 cgatccgatccgatgcgatgc 84 ||||||||||||||||||||| Sbjct: 19537240 cgatccgatccgatgcgatgc 19537260
>gb|AC009459.6| Drosophila melanogaster, chromosome 2R, region 57E-57F, BAC clone BACR34C17, complete sequence Length = 167447 Score = 48.1 bits (24), Expect = 0.090 Identities = 24/24 (100%) Strand = Plus / Plus Query: 61 ctccgatccgatccgatgcgatgc 84 |||||||||||||||||||||||| Sbjct: 106052 ctccgatccgatccgatgcgatgc 106075
>gb|AC007803.7|AC007803 Drosophila melanogaster, chromosome 2R, region 58A1-58A2, BAC clone BACR13F14, complete sequence Length = 198244 Score = 48.1 bits (24), Expect = 0.090 Identities = 24/24 (100%) Strand = Plus / Minus Query: 61 ctccgatccgatccgatgcgatgc 84 |||||||||||||||||||||||| Sbjct: 195415 ctccgatccgatccgatgcgatgc 195392
>gb|AC009912.5|AC009912 Drosophila melanogaster, chromosome 2R, region 57F-58A, BAC clone BACR46G10, complete sequence Length = 165158 Score = 48.1 bits (24), Expect = 0.090 Identities = 24/24 (100%) Strand = Plus / Plus Query: 61 ctccgatccgatccgatgcgatgc 84 |||||||||||||||||||||||| Sbjct: 67481 ctccgatccgatccgatgcgatgc 67504
>ref|NM_001074487.1| Oryza sativa (japonica cultivar-group) Os11g0508600 (Os11g0508600) mRNA, complete cds Length = 1492 Score = 46.1 bits (23), Expect = 0.36 Identities = 23/23 (100%) Strand = Plus / Plus Query: 95 cgacgaccactccgccgccggcg 117 ||||||||||||||||||||||| Sbjct: 933 cgacgaccactccgccgccggcg 955
>gb|AC189260.1| Brassica rapa subsp. pekinensis clone KBrB021M22, complete sequence Length = 112105 Score = 46.1 bits (23), Expect = 0.36 Identities = 26/27 (96%) Strand = Plus / Minus Query: 104 ctccgccgccggcgccgctgcgtcctc 130 ||||||||||| ||||||||||||||| Sbjct: 94372 ctccgccgccgccgccgctgcgtcctc 94346
>gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0008H02, complete sequence Length = 143438 Score = 46.1 bits (23), Expect = 0.36 Identities = 23/23 (100%) Strand = Plus / Minus Query: 95 cgacgaccactccgccgccggcg 117 ||||||||||||||||||||||| Sbjct: 81699 cgacgaccactccgccgccggcg 81677
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 46.1 bits (23), Expect = 0.36 Identities = 23/23 (100%) Strand = Plus / Minus Query: 95 cgacgaccactccgccgccggcg 117 ||||||||||||||||||||||| Sbjct: 17573888 cgacgaccactccgccgccggcg 17573866
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 46.1 bits (23), Expect = 0.36 Identities = 23/23 (100%) Strand = Plus / Plus Query: 92 ggtcgacgaccactccgccgccg 114 ||||||||||||||||||||||| Sbjct: 93871 ggtcgacgaccactccgccgccg 93893
>gb|AC079818.56| Mus musculus strain C57BL/6J chromosome 10 clone rp23-362c8, complete sequence Length = 238658 Score = 46.1 bits (23), Expect = 0.36 Identities = 23/23 (100%) Strand = Plus / Minus Query: 199 ttcccaaccctcccttctcctcc 221 ||||||||||||||||||||||| Sbjct: 123209 ttcccaaccctcccttctcctcc 123187
>dbj|AK101913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071H09, full insert sequence Length = 1494 Score = 46.1 bits (23), Expect = 0.36 Identities = 23/23 (100%) Strand = Plus / Plus Query: 95 cgacgaccactccgccgccggcg 117 ||||||||||||||||||||||| Sbjct: 934 cgacgaccactccgccgccggcg 956
>gb|AY109647.1| Zea mays CL5260_1 mRNA sequence Length = 1314 Score = 46.1 bits (23), Expect = 0.36 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1014 aagtggaggcagcagcgaattctggagctggaggt 1048 |||||||||||||||| ||||||||||| ||||| Sbjct: 1196 aagtggaggcagcagcagattctggagcttgaggt 1230
>gb|AC190171.2| Pan troglodytes BAC clone CH251-522D1 from chromosome x, complete sequence Length = 183278 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 aattcccaaccctcccttctcc 218 |||||||||||||||||||||| Sbjct: 109356 aattcccaaccctcccttctcc 109335
>ref|NM_001053125.1| Oryza sativa (japonica cultivar-group) Os02g0290400 (Os02g0290400) mRNA, complete cds Length = 1107 Score = 44.1 bits (22), Expect = 1.4 Identities = 31/34 (91%) Strand = Plus / Minus Query: 106 ccgccgccggcgccgctgcgtcctcctccttccc 139 ||||||||| |||||| |||||||||||||||| Sbjct: 244 ccgccgccgccgccgccacgtcctcctccttccc 211
>ref|XM_511436.2| PREDICTED: Pan troglodytes similar to mKIAA1501 protein (LOC454610), partial mRNA Length = 2600 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 706 gcggccgccgcaggcgcacggc 727 |||||||||||||||||||||| Sbjct: 727 gcggccgccgcaggcgcacggc 706
>ref|XM_290799.7| PREDICTED: Homo sapiens Rho GTPase activating protein 23, transcript variant 1 (ARHGAP23), mRNA Length = 6475 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 706 gcggccgccgcaggcgcacggc 727 |||||||||||||||||||||| Sbjct: 4753 gcggccgccgcaggcgcacggc 4732
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 62 tccgatccgatccgatgcgatg 83 |||||||||||||||||||||| Sbjct: 20676963 tccgatccgatccgatgcgatg 20676942
>ref|XM_001082710.1| PREDICTED: Macaca mulatta similar to Rho GTPase activating protein 21 (LOC693996), mRNA Length = 5593 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 706 gcggccgccgcaggcgcacggc 727 |||||||||||||||||||||| Sbjct: 5083 gcggccgccgcaggcgcacggc 5062
>gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J17, complete sequence Length = 141598 Score = 44.1 bits (22), Expect = 1.4 Identities = 28/30 (93%) Strand = Plus / Minus Query: 104 ctccgccgccggcgccgctgcgtcctcctc 133 ||||||||||| |||||| ||||||||||| Sbjct: 106329 ctccgccgccgccgccgccgcgtcctcctc 106300
>gb|AC151913.1| Pan troglodytes chromosome X clone RP43-057B02 map human ortholog q26.2, complete sequence Length = 173886 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 aattcccaaccctcccttctcc 218 |||||||||||||||||||||| Sbjct: 129737 aattcccaaccctcccttctcc 129716
>gb|AC151912.1| Pan troglodytes chromosome X clone PTB-093M21 map human ortholog q26.2, complete sequence Length = 180904 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 aattcccaaccctcccttctcc 218 |||||||||||||||||||||| Sbjct: 17018 aattcccaaccctcccttctcc 16997
>gb|AC008341.3| Drosophila melanogaster clone BACR15P11, complete sequence Length = 171235 Score = 44.1 bits (22), Expect = 1.4 Identities = 31/34 (91%) Strand = Plus / Minus Query: 101 ccactccgccgccggcgccgctgcgtcctcctcc 134 ||||||||||||||||||| | || ||||||||| Sbjct: 46074 ccactccgccgccggcgccaccgcctcctcctcc 46041
>gb|AC091001.3| Papio anubis clone RP41-36M16, complete sequence Length = 177066 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 420 cagctcgatttctccaagagcc 441 |||||||||||||||||||||| Sbjct: 41577 cagctcgatttctccaagagcc 41598
>ref|NM_136634.2| Drosophila melanogaster Rep2 CG1975-RA (Rep2), mRNA Length = 5230 Score = 44.1 bits (22), Expect = 1.4 Identities = 31/34 (91%) Strand = Plus / Minus Query: 101 ccactccgccgccggcgccgctgcgtcctcctcc 134 ||||||||||||||||||| | || ||||||||| Sbjct: 1467 ccactccgccgccggcgccaccgcctcctcctcc 1434
>gb|AC115090.8| Homo sapiens chromosome 17, clone CTC-861O14, complete sequence Length = 173716 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 706 gcggccgccgcaggcgcacggc 727 |||||||||||||||||||||| Sbjct: 44350 gcggccgccgcaggcgcacggc 44371
>gb|AC010117.6| Drosophila melanogaster 3L BAC RP98-21J2 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178965 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 tccgatccgatccgatgcgatg 83 |||||||||||||||||||||| Sbjct: 13057 tccgatccgatccgatgcgatg 13078
>gb|AC093551.3| Drosophila melanogaster 3L BAC RP98-48C13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179055 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 62 tccgatccgatccgatgcgatg 83 |||||||||||||||||||||| Sbjct: 62189 tccgatccgatccgatgcgatg 62168
>gb|AC119868.2| Homo sapiens chromosome 18, clone RP11-465I4, complete sequence Length = 174780 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1254 aaatatatatatcaaaattgca 1275 |||||||||||||||||||||| Sbjct: 39576 aaatatatatatcaaaattgca 39597
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 1.4 Identities = 28/30 (93%) Strand = Plus / Minus Query: 104 ctccgccgccggcgccgctgcgtcctcctc 133 ||||||||||| |||||| ||||||||||| Sbjct: 16465892 ctccgccgccgccgccgccgcgtcctcctc 16465863
>gb|AC068254.6| Homo sapiens chromosome 18, clone RP11-543H23, complete sequence Length = 219260 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1254 aaatatatatatcaaaattgca 1275 |||||||||||||||||||||| Sbjct: 183396 aaatatatatatcaaaattgca 183417
>emb|AL136228.8| Human DNA sequence from clone RP1-66H9 on chromosome 6 Contains two CpG islands, complete sequence Length = 92460 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 703 gccgcggccgccgcaggcgcac 724 |||||||||||||||||||||| Sbjct: 68427 gccgcggccgccgcaggcgcac 68448
>gb|AY060400.1| Drosophila melanogaster LD32009 full length cDNA Length = 5216 Score = 44.1 bits (22), Expect = 1.4 Identities = 31/34 (91%) Strand = Plus / Minus Query: 101 ccactccgccgccggcgccgctgcgtcctcctcc 134 ||||||||||||||||||| | || ||||||||| Sbjct: 1437 ccactccgccgccggcgccaccgcctcctcctcc 1404
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 232 tggtcgcgcccgcctccgcctcggcc 257 ||||||||||||||||||||| |||| Sbjct: 3768618 tggtcgcgcccgcctccgccttggcc 3768643
>dbj|AP005516.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0066H10 Length = 200968 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 599 ccgcgaccccagcgccgccgac 620 |||||||||||||||||||||| Sbjct: 105528 ccgcgaccccagcgccgccgac 105507
>dbj|AP004212.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1086_G08 Length = 59883 Score = 44.1 bits (22), Expect = 1.4 Identities = 31/34 (91%) Strand = Plus / Minus Query: 106 ccgccgccggcgccgctgcgtcctcctccttccc 139 ||||||||| |||||| |||||||||||||||| Sbjct: 16476 ccgccgccgccgccgccacgtcctcctccttccc 16443
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 44.1 bits (22), Expect = 1.4 Identities = 31/34 (91%) Strand = Plus / Minus Query: 106 ccgccgccggcgccgctgcgtcctcctccttccc 139 ||||||||| |||||| |||||||||||||||| Sbjct: 196012 ccgccgccgccgccgccacgtcctcctccttccc 195979
>gb|AC129916.6| Homo sapiens chromosome 17, clone RP11-2L19, complete sequence Length = 167265 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 706 gcggccgccgcaggcgcacggc 727 |||||||||||||||||||||| Sbjct: 90153 gcggccgccgcaggcgcacggc 90174
>dbj|AK101872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070F10, full insert sequence Length = 1108 Score = 44.1 bits (22), Expect = 1.4 Identities = 31/34 (91%) Strand = Plus / Minus Query: 106 ccgccgccggcgccgctgcgtcctcctccttccc 139 ||||||||| |||||| |||||||||||||||| Sbjct: 245 ccgccgccgccgccgccacgtcctcctccttccc 212
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 tacgaggagatgcgccgccgc 416 ||||||||||||||||||||| Sbjct: 4500839 tacgaggagatgcgccgccgc 4500819
>gb|CP000453.1| Alkalilimnicola ehrlichei MLHE-1, complete genome Length = 3275944 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 937 gcccgtcgccgctgggcctgg 957 ||||||||||||||||||||| Sbjct: 904791 gcccgtcgccgctgggcctgg 904771
>gb|AC188796.3| Pan troglodytes BAC clone CH251-299E13 from chromosome 7, complete sequence Length = 168464 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1408 ctccttccgttcgtggaactt 1428 ||||||||||||||||||||| Sbjct: 149025 ctccttccgttcgtggaactt 149005
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 tccgatccgatccgatgcgat 82 ||||||||||||||||||||| Sbjct: 18454111 tccgatccgatccgatgcgat 18454091
>gb|BT027645.1| Gasterosteus aculeatus clone CGX74-E03 mRNA sequence Length = 1699 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 ccgccggcgccgctgcgtcct 129 ||||||||||||||||||||| Sbjct: 597 ccgccggcgccgctgcgtcct 577
>gb|CP000390.1| Mesorhizobium sp. BNC1, complete genome Length = 4412446 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 837 ggtgctgagcctgttgtggcgccag 861 ||||||||||||||||| ||||||| Sbjct: 2701087 ggtgctgagcctgttgtcgcgccag 2701111
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 632 cgccaccatcaccgccacgaatgcc 656 |||||||||||||||||| |||||| Sbjct: 3042151 cgccaccatcaccgccaccaatgcc 3042127
>gb|AC169985.2| Mus musculus BAC clone RP23-289G14 from chromosome 13, complete sequence Length = 218393 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 515 cactttctcctttcgctcccctcac 539 |||||||||||||| |||||||||| Sbjct: 115203 cactttctcctttccctcccctcac 115227
>gb|AC146097.4| Pan troglodytes BAC clone RP43-50K16 from 7, complete sequence Length = 183088 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1408 ctccttccgttcgtggaactt 1428 ||||||||||||||||||||| Sbjct: 178809 ctccttccgttcgtggaactt 178829
>gb|AC147147.2| Pan troglodytes BAC clone CH251-230I19 from Y, complete sequence Length = 143402 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1427 ttttaaagattttattacaga 1447 ||||||||||||||||||||| Sbjct: 121539 ttttaaagattttattacaga 121559
>gb|AC163350.4| Mus musculus BAC clone RP23-186B12 from chromosome 9, complete sequence Length = 203468 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 111 gccggcgccgctgcgtcctcctcct 135 |||||||||||||| |||||||||| Sbjct: 4603 gccggcgccgctgcctcctcctcct 4579
>ref|XM_750420.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g11810) partial mRNA Length = 3813 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 616 ccgactctgaggacgacgcca 636 ||||||||||||||||||||| Sbjct: 3161 ccgactctgaggacgacgcca 3181
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 696 gcgcatcgccgcggccgccgc 716 ||||||||||||||||||||| Sbjct: 162051 gcgcatcgccgcggccgccgc 162071
>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14 Length = 349305 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 696 gcgcatcgccgcggccgccgc 716 ||||||||||||||||||||| Sbjct: 98529 gcgcatcgccgcggccgccgc 98549
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 703 gccgcggccgccgcaggcgcacggc 727 ||||||||||||||||| ||||||| Sbjct: 129367 gccgcggccgccgcaggtgcacggc 129391
>gb|AC010133.4|AC010133 Homo sapiens clone RP11-118E9, complete sequence Length = 152074 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1427 ttttaaagattttattacaga 1447 ||||||||||||||||||||| Sbjct: 129939 ttttaaagattttattacaga 129959
>gb|AC012373.14|AC012373 Drosophila melanogaster, chromosome X, region 17B-17C, BAC clone BACR17H16, complete sequence Length = 182080 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 tccgatccgatccgatgcgat 82 ||||||||||||||||||||| Sbjct: 52704 tccgatccgatccgatgcgat 52684
>gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, region 59E3-59F4, BAC clone BACR48M01, complete sequence Length = 188272 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 cgatccgatccgatgcgatgc 84 ||||||||||||||||||||| Sbjct: 137366 cgatccgatccgatgcgatgc 137386
>gb|AC115625.3| Homo sapiens BAC clone RP11-588E23 from 2, complete sequence Length = 163505 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 tcccttctcctcctctgcttc 229 ||||||||||||||||||||| Sbjct: 121868 tcccttctcctcctctgcttc 121888
>gb|AC016906.7| Homo sapiens BAC clone RP11-436E24 from 2, complete sequence Length = 183045 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 tcccttctcctcctctgcttc 229 ||||||||||||||||||||| Sbjct: 66184 tcccttctcctcctctgcttc 66204
>gb|AC097280.8| Oryza sativa chromosome 3 BAC OSJNBb0111B07 genomic sequence, complete sequence Length = 129647 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1254 aaatatatatatcaaaattgc 1274 ||||||||||||||||||||| Sbjct: 29202 aaatatatatatcaaaattgc 29182
>dbj|BS000620.1| Pan troglodytes chromosome Y clone:PTB-548J12, complete sequences Length = 199682 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1427 ttttaaagattttattacaga 1447 ||||||||||||||||||||| Sbjct: 16678 ttttaaagattttattacaga 16698
>dbj|BS000574.1| Pan troglodytes chromosome Y clone:PTB-031D23, complete sequences Length = 142928 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1427 ttttaaagattttattacaga 1447 ||||||||||||||||||||| Sbjct: 137081 ttttaaagattttattacaga 137101
>gb|AC163641.5| Mus musculus BAC clone RP24-445G19 from chromosome 13, complete sequence Length = 190073 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 515 cactttctcctttcgctcccctcac 539 |||||||||||||| |||||||||| Sbjct: 102536 cactttctcctttccctcccctcac 102560
>gb|AF004882.1|AF004882 Homo sapiens N-acetylglucosaminyltransferase gene, partial cds Length = 8346 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 tcccttctcctcctctgcttc 229 ||||||||||||||||||||| Sbjct: 196 tcccttctcctcctctgcttc 216 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 230,428,871 Number of extensions: 13170805 Number of successful extensions: 323665 Number of sequences better than 10.0: 82 Number of HSP's gapped: 323657 Number of HSP's successfully gapped: 122 Length of query: 1466 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1443 Effective length of database: 18,503,978,556 Effective search space: 26701241056308 Effective search space used: 26701241056308 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
