ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf96a10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK121738:Os03g0257000 278 3e-75
2Os03g0209700:Os03g0209700 252 2e-67
3AK102387:Os10g0490100 31 1.1
4Os08g0174900:Os08g0174900 30 3.3
5AK111813: 29 4.3
6AK111777:Os07g0187700 29 4.3
7AK120611:Os03g0336700 28 9.5
8AK119213:Os02g0781400 28 9.5

>AK121738:Os03g0257000 |
          Length = 174
 Score =  278 bits (712), Expect = 3e-75
 Identities = 132/153 (86%), Positives = 141/153 (92%)
 Frame = +3

Query: 108 DTGEKMEGVASIALLPSGAISGHFIRLPDSACYGLQGTPIPCERECSRGDDYRLIKLSII 287
           D GE MEGVASIALLPSGAISGHFIRLPDS CYGL GTPI CERECSRG+DYRLIKLSII
Sbjct: 12  DAGETMEGVASIALLPSGAISGHFIRLPDSVCYGLHGTPISCERECSRGEDYRLIKLSII 71

Query: 288 NFKRKTEKVVVVECRGHDAARLQNIDHLHGWEDDVVGLVQKKHGNKKVLVSFECETLKAD 467
           +FK K EKV VVECRGHDAARLQNIDHLHGWEDD+VGLV+KKHGN+K  +SFECETLKAD
Sbjct: 72  DFKNKREKVAVVECRGHDAARLQNIDHLHGWEDDIVGLVEKKHGNRKFSISFECETLKAD 131

Query: 468 KAAEEHISKYMPNLCGLDAVVNTGKMSISGINL 566
           KAA+EHISKYMPNL G+DA+VN GKMSISGINL
Sbjct: 132 KAADEHISKYMPNLSGMDAIVNIGKMSISGINL 164



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>Os03g0209700:Os03g0209700 |
          Length = 234

 Score =  252 bits (644), Expect = 2e-67
 Identities = 123/142 (86%), Positives = 130/142 (91%), Gaps = 2/142 (1%)
 Frame = +3

Query: 108 DTGEK--MEGVASIALLPSGAISGHFIRLPDSACYGLQGTPIPCERECSRGDDYRLIKLS 281
           D+GE   MEGVASIALLPSGAISGHF RLPDS CYGL GTPI CERECSRG+DYRLIKLS
Sbjct: 13  DSGESETMEGVASIALLPSGAISGHFTRLPDSVCYGLHGTPISCERECSRGEDYRLIKLS 72

Query: 282 IINFKRKTEKVVVVECRGHDAARLQNIDHLHGWEDDVVGLVQKKHGNKKVLVSFECETLK 461
           II+FK K EKVVVVECRGHDAARLQNIDHLHGWEDD+VGLV+KKHGN+K  +SFECETLK
Sbjct: 73  IIDFKNKHEKVVVVECRGHDAARLQNIDHLHGWEDDIVGLVEKKHGNRKFSLSFECETLK 132

Query: 462 ADKAAEEHISKYMPNLCGLDAV 527
           ADKAAEEHISKYMPNL GLDAV
Sbjct: 133 ADKAAEEHISKYMPNLKGLDAV 154



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>AK102387:Os10g0490100 |
          Length = 213

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -2

Query: 739 PLRDLLQSAQCRNTSAVA*NSCCCNSDTQS-CFVDGI 632
           P R LLQS+ C+ + A+   S  CN+D  S C  DG+
Sbjct: 44  PHRSLLQSSSCQPSGAITGTSGDCNADNGSECCQDGV 80



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>Os08g0174900:Os08g0174900 |
          Length = 428

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 300 KTEKVVVVECRGHDAARLQNIDHLHGWEDDVVGLVQKKHGNKKVL 434
           K ++ V V+C G     +QN+   H  ED   GL+  +HG + +L
Sbjct: 198 KNDEAVRVKCLGVPTVDMQNV--CHQLEDKTGGLIIHRHGGQLIL 240



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>AK111813: |
          Length = 377

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 8/45 (17%)
 Frame = +1

Query: 289 ILRGKQRRWLWWNAGDMMLLGYK--------TLTICMDGKMMLLG 399
           + +G +   + WN  D   +GYK        TL++ MDGK + LG
Sbjct: 212 VAKGNKVVTVVWNISDWSRIGYKRLLGKPISTLSVSMDGKYLALG 256



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>AK111777:Os07g0187700 |
          Length = 387

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 8/45 (17%)
 Frame = +1

Query: 289 ILRGKQRRWLWWNAGDMMLLGYK--------TLTICMDGKMMLLG 399
           + +G +   + WN  D   +GYK        TL++ MDGK + LG
Sbjct: 222 VAKGNKVVTVVWNISDWSRIGYKRLLGKPISTLSVSMDGKYLALG 266



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>AK120611:Os03g0336700 |
          Length = 1035

 Score = 28.1 bits (61), Expect = 9.5
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = -2

Query: 793 GPNSLIRIMADAATATHIPLRDLLQSAQCRNTSAVA*NSCCCNSDTQSCFVDGID 629
           GP +L  +      AT+ P  DLL   +  N S    +S  CN++ +S +++ ID
Sbjct: 252 GPVALSSLPNQIVEATNTPGSDLLFDKEFLNNSVQKTDSNACNTEFRSKYLNIID 306



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>AK119213:Os02g0781400 |
          Length = 195

 Score = 28.1 bits (61), Expect = 9.5
 Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
 Frame = +3

Query: 129 GVASIALLPSGAISGHFIRLPDSACYG-LQGTPIPCERECSRGDDYRLIKLSIINFKRKT 305
           GV ++A    G  S   +RLP  A    L+  P P     SRG    +++ +  +   K 
Sbjct: 10  GVGAVAFATKGMASRDALRLPPPAAVRVLRQAPRP-----SRG---LVVRAAAASVAPKV 61

Query: 306 EKVVVVECRGHDAARLQNIDHLHGWEDDVVGLVQ 407
              VV          L + +HL   EDD++G+++
Sbjct: 62  GSQVVYSKYAGTEVELNDSNHLILKEDDIIGILE 95


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 24,450,314
Number of extensions: 514171
Number of successful extensions: 1563
Number of sequences better than 10.0: 8
Number of HSP's gapped: 1560
Number of HSP's successfully gapped: 8
Length of query: 319
Length of database: 15,399,855
Length adjustment: 101
Effective length of query: 218
Effective length of database: 11,355,714
Effective search space: 2475545652
Effective search space used: 2475545652
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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