ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf96a10 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os03g11130:12003.t00913:unspliced-genomic conserved hypothetical protein| Length = 3903 Score = 110 bits (234), Expect(5) = 1e-65 Identities = 44/53 (83%), Positives = 48/53 (90%) Frame = +3 / +1 Query: 369 LHGWEDDVVGLVQKKHGNKKVLVSFECETLKADKAAEEHISKYMPNLCGLDAV 527 L WEDD+VGLV+KKHGN+K +SFECETLKADKAAEEHISKYMPNL GLDAV Sbjct: 1921 LCSWEDDIVGLVEKKHGNRKFSLSFECETLKADKAAEEHISKYMPNLKGLDAV 2079 Score = 76.7 bits (161), Expect(5) = 1e-65 Identities = 32/37 (86%), Positives = 32/37 (86%) Frame = +3 / +1 Query: 117 EKMEGVASIALLPSGAISGHFIRLPDSACYGLQGTPI 227 E MEGVASIALLPSGAISGHF RLPDS CYGL GT I Sbjct: 52 ETMEGVASIALLPSGAISGHFTRLPDSVCYGLHGTRI 162 Score = 63.4 bits (132), Expect(5) = 1e-65 Identities = 25/26 (96%), Positives = 25/26 (96%) Frame = +3 / +1 Query: 300 KTEKVVVVECRGHDAARLQNIDHLHG 377 K EKVVVVECRGHDAARLQNIDHLHG Sbjct: 1132 KHEKVVVVECRGHDAARLQNIDHLHG 1209 Score = 56.1 bits (116), Expect(5) = 1e-65 Identities = 22/31 (70%), Positives = 26/31 (83%) Frame = +3 / +3 Query: 225 IPCERECSRGDDYRLIKLSIINFKRKTEKVV 317 I CERECSRG+DYRLIKLSII+FK + +V Sbjct: 897 ISCERECSRGEDYRLIKLSIIDFKVRNSNLV 989 Score = 34.5 bits (69), Expect(5) = 1e-65 Identities = 16/25 (64%), Positives = 18/25 (72%) Frame = +1 / +2 Query: 538 GR*ASLASTSTRTMNQAATAESINT 612 G+*ASLAS TRTMNQ T +S T Sbjct: 2468 GK*ASLASILTRTMNQVVTTKSRGT 2542 Score = 92.3 bits (195), Expect(5) = 4e-60 Identities = 39/49 (79%), Positives = 42/49 (85%) Frame = -2 / -2 Query: 526 TASSPQRFGIYLLICSSAALSAFSVSHSKETRTFLFPCFF*TNPTTSSS 380 TAS+P RFGIYLL+CSSAALSAFSVSHSKE+ F FPCFF T PT SSS Sbjct: 2078 TASNPFRFGIYLLMCSSAALSAFSVSHSKESENFRFPCFFSTKPTMSSS 1932 Score = 78.5 bits (165), Expect(5) = 4e-60 Identities = 31/35 (88%), Positives = 32/35 (91%) Frame = -2 / -2 Query: 226 IGVPWRP*QAESGRRMKWPEMAPEGSSAMDATPSI 122 I VPWRP*Q ESGRR+KWPEMAPEG SAMDATPSI Sbjct: 161 IRVPWRP*QTESGRRVKWPEMAPEGRSAMDATPSI 57 Score = 66.1 bits (138), Expect(5) = 4e-60 Identities = 24/29 (82%), Positives = 26/29 (89%) Frame = -2 / -2 Query: 391 TSSSHPCKWSMFCNRAASCPLHSTTTTFS 305 T ++PCKWSMFCNRAAS PLHSTTTTFS Sbjct: 1223 TKGTYPCKWSMFCNRAASWPLHSTTTTFS 1137 Score = 45.5 bits (93), Expect(5) = 4e-60 Identities = 16/26 (61%), Positives = 20/26 (76%) Frame = -1 / -1 Query: 605 MLSAVAAWFIVLVEVDARDAHLPRVY 528 +L V WFIVLV++DARDAH P +Y Sbjct: 2535 LLLVVTTWFIVLVKIDARDAHFPYIY 2458 Score = 39.6 bits (80), Expect(5) = 4e-60 Identities = 17/25 (68%), Positives = 19/25 (76%) Frame = -1 / -2 Query: 296 LKINDGELYEAVIISSATFPLAWYR 222 LKIN G+LY+AVI SSA PL YR Sbjct: 968 LKINYGKLYQAVIFSSAALPLTRYR 894 Score = 68.4 bits (143), Expect(5) = 7e-34 Identities = 28/53 (52%), Positives = 36/53 (67%) Frame = -1 / -1 Query: 527 NCIQSAKIWHILANMFFGGFIGL*RLAFERDQDFLVPMFLLNQPNNIIFPSMQ 369 +CIQS IWHILAN+ F F+ L L FE + +P+FL NQ NN+IFP+ Q Sbjct: 2079 DCIQSF*IWHILANVLFCSFVSLQCLTFEGE*KLPIPVFLFNQTNNVIFPTAQ 1921 Score = 62.0 bits (129), Expect(5) = 7e-34 Identities = 21/23 (91%), Positives = 21/23 (91%) Frame = -3 / -3 Query: 375 HANGQCFVTEQHHVPCIPPQPPS 307 HANGQCF TEQHH PCIPPQPPS Sbjct: 1207 HANGQCFATEQHHGPCIPPQPPS 1139 Score = 41.8 bits (85), Expect(5) = 7e-34 Identities = 16/22 (72%), Positives = 17/22 (77%) Frame = -3 / -3 Query: 603 ALSCRRLVHRPRRG*CQRCSSS 538 A SC LVHRPR+ *CQRCS S Sbjct: 2533 AFSCHNLVHRPRQD*CQRCSFS 2468 Score = 32.2 bits (64), Expect(5) = 7e-34 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = -3 / -1 Query: 303 FSS*N**WRAL*GGNHLLGYIPSRMV 226 FS *N W+AL GGN LLG PS + Sbjct: 975 FSP*NQLWKALSGGNLLLGCTPSHKI 898 Score = 27.2 bits (53), Expect(5) = 7e-34 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = -1 / -1 Query: 218 ALEAVAGGVREADEV 174 A+EAVA GVREA EV Sbjct: 153 AVEAVADGVREAGEV 109 Score = 62.5 bits (130), Expect(4) = 3e-26 Identities = 30/52 (57%), Positives = 31/52 (59%) Frame = +1 / +2 Query: 370 CMDGKMMLLGWFKRNMGTRKSWSLSNARR*RPIKPPKNILASICQIFADWMQ 525 C GKM LL W KRN G S SN R *R K K+ LASICQI DWMQ Sbjct: 1922 CAVGKMTLLVWLKRNTGIGSFHSPSNVRH*RLTKLQKSTLASICQI*KDWMQ 2077 Score = 59.7 bits (124), Expect(4) = 3e-26 Identities = 23/30 (76%), Positives = 24/30 (80%) Frame = +1 / +2 Query: 286 LILRGKQRRWLWWNAGDMMLLGYKTLTICM 375 L+ R RRWLWWNAG MMLLG KTLTICM Sbjct: 1118 LLDRTSTRRWLWWNAGAMMLLGCKTLTICM 1207 Score = 35.0 bits (70), Expect(4) = 3e-26 Identities = 16/26 (61%), Positives = 19/26 (73%) Frame = +2 / +2 Query: 224 DTMREGM*PRR*LPPHKALHH*F*EE 301 D + EG+ PRR LPP KA H+*F* E Sbjct: 896 DIL*EGVQPRRRLPPDKAFHN*F*GE 973 Score = 29.0 bits (57), Expect(4) = 3e-26 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +3 / +1 Query: 528 VNTGKMSISGINL 566 VN GKMSISGINL Sbjct: 2458 VNIGKMSISGINL 2496 Score = 63.8 bits (133), Expect(3) = 2e-20 Identities = 28/50 (56%), Positives = 34/50 (68%) Frame = -3 / -3 Query: 528 QLHPVRKDLAYTC*YVLRRLYRPLASRIRKRPGLSCSHVSFEPTQQHHLP 379 +LHP+ DLAYTC* L +L +P S IR+R S S VSF+P QQ HLP Sbjct: 2080 RLHPILLDLAYTC*CALLQLCQPSVSHIRRRVKTSDSRVSFQPNQQCHLP 1931 Score = 53.3 bits (110), Expect(3) = 2e-20 Identities = 22/27 (81%), Positives = 23/27 (85%) Frame = -1 / -1 Query: 374 MQMVNVL*PSSIMSPAFHHNHLLCFPL 294 MQMVNVL PSSIM+PAFHHNHLL L Sbjct: 1206 MQMVNVLQPSSIMAPAFHHNHLLVLVL 1126 Score = 29.0 bits (57), Expect(3) = 2e-20 Identities = 10/11 (90%), Positives = 11/11 (100%) Frame = -2 / -2 Query: 559 MPEMLIFPVFT 527 MPEMLIFP+FT Sbjct: 2489 MPEMLIFPIFT 2457 Score = 62.0 bits (129), Expect(3) = 4e-13 Identities = 31/53 (58%), Positives = 34/53 (64%) Frame = +2 / +3 Query: 368 FAWMGR*CCWVGSKETWEQESPGLFRMRDAKGR*SRRRTY*QVYAKSLRTGCS 526 F +GR* CW G KET E E L RM D +G S RR +*QVYAKS R GCS Sbjct: 1920 FVQLGR*HCWFG*KETRESEVFTLLRM*DTEG*QSCRRAH*QVYAKSKRIGCS 2078 Score = 31.8 bits (63), Expect(3) = 4e-13 Identities = 17/30 (56%), Positives = 19/30 (63%) Frame = +1 / +1 Query: 226 YHARGNVAEEMITAS*SSPSLILRGKQRRW 315 Y RG+ AEE ITA *S P LILR + W Sbjct: 898 YLVRGSAAEEKITA**SFP*LILR*EILTW 987 Score = 26.7 bits (52), Expect(3) = 4e-13 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = +2 / +3 Query: 530 KHGEDEHLWHQ 562 K+ E+EHLWHQ Sbjct: 2460 KYRENEHLWHQ 2492
>LOC_Os03g15190:12003.t01305:unspliced-genomic expressed protein| Length = 4262 Score = 111 bits (236), Expect(5) = 6e-59 Identities = 42/58 (72%), Positives = 51/58 (87%) Frame = +3 / +3 Query: 354 QNIDHLHGWEDDVVGLVQKKHGNKKVLVSFECETLKADKAAEEHISKYMPNLCGLDAV 527 + I+ L WEDD+VGLV+KKHGN+K +SFECETLKADKAA+EHISKYMPNL G+DA+ Sbjct: 3360 EGINILCSWEDDIVGLVEKKHGNRKFSISFECETLKADKAADEHISKYMPNLSGMDAI 3533 Score = 88.1 bits (186), Expect(5) = 6e-59 Identities = 38/48 (79%), Positives = 39/48 (81%) Frame = -2 / -2 Query: 523 ASSPQRFGIYLLICSSAALSAFSVSHSKETRTFLFPCFF*TNPTTSSS 380 AS P RFGIYLL+CSSAALSAFSVSHSKE F FPCFF T PT SSS Sbjct: 3529 ASIPLRFGIYLLMCSSAALSAFSVSHSKEIENFRFPCFFSTKPTMSSS 3386 Score = 84.5 bits (178), Expect(5) = 6e-59 Identities = 35/40 (87%), Positives = 35/40 (87%) Frame = +3 / +3 Query: 108 DTGEKMEGVASIALLPSGAISGHFIRLPDSACYGLQGTPI 227 D GE MEGVASIALLPSGAISGHFIRLPDS CYGL GT I Sbjct: 168 DAGETMEGVASIALLPSGAISGHFIRLPDSVCYGLHGTRI 287 Score = 81.3 bits (171), Expect(5) = 6e-59 Identities = 32/35 (91%), Positives = 33/35 (94%) Frame = -2 / -2 Query: 226 IGVPWRP*QAESGRRMKWPEMAPEGSSAMDATPSI 122 I VPWRP*Q ESGRRMKWPEMAP+GSSAMDATPSI Sbjct: 286 IRVPWRP*QTESGRRMKWPEMAPDGSSAMDATPSI 182 Score = 67.0 bits (140), Expect(5) = 6e-59 Identities = 25/29 (86%), Positives = 26/29 (89%) Frame = -2 / -2 Query: 391 TSSSHPCKWSMFCNRAASCPLHSTTTTFS 305 T SS+PCKWSMFCNRAAS PLHSTT TFS Sbjct: 2647 TKSSYPCKWSMFCNRAASWPLHSTTATFS 2561 Score = 62.5 bits (130), Expect(5) = 6e-59 Identities = 24/28 (85%), Positives = 25/28 (89%) Frame = +3 / +3 Query: 294 KRKTEKVVVVECRGHDAARLQNIDHLHG 377 + K EKV VVECRGHDAARLQNIDHLHG Sbjct: 2550 QNKREKVAVVECRGHDAARLQNIDHLHG 2633 Score = 44.1 bits (90), Expect(5) = 6e-59 Identities = 14/26 (53%), Positives = 20/26 (76%) Frame = -1 / -2 Query: 605 MLSAVAAWFIVLVEVDARDAHLPRVY 528 +L V+ WF+VLV++DARD H P +Y Sbjct: 3901 LLLVVSTWFVVLVQIDARDTHFPYIY 3824 Score = 37.7 bits (76), Expect(5) = 6e-59 Identities = 16/25 (64%), Positives = 18/25 (72%) Frame = -1 / -3 Query: 296 LKINDGELYEAVIISSATFPLAWYR 222 LKIN G+LY+AVI SS PL YR Sbjct: 2415 LKINYGKLYQAVIFSSTALPLTRYR 2341 Score = 31.3 bits (62), Expect(5) = 6e-59 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = +2 / +3 Query: 224 DTMREGM*PRR*LPPHKALHH*F*EE 301 D + EG+ RR LPP KA H+*F* E Sbjct: 2343 DIL*EGVQSRRRLPPDKAFHN*F*GE 2420 Score = 29.0 bits (57), Expect(5) = 6e-59 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +3 / +2 Query: 528 VNTGKMSISGINL 566 VN GKMSISGINL Sbjct: 3824 VNIGKMSISGINL 3862 Score = 73.9 bits (155), Expect(5) = 3e-32 Identities = 30/53 (56%), Positives = 37/53 (69%) Frame = -1 / -1 Query: 521 IQSAKIWHILANMFFGGFIGL*RLAFERDQDFLVPMFLLNQPNNIIFPSMQMV 363 I S IWHILAN+ FI L L FERD++F +PMFL NQ NN+IFP+ Q + Sbjct: 3527 IHST*IWHILANVLICSFISLQCLTFERDREFPIPMFLFNQTNNVIFPTAQNI 3369 Score = 64.3 bits (134), Expect(5) = 3e-32 Identities = 23/27 (85%), Positives = 23/27 (85%) Frame = -3 / -3 Query: 375 HANGQCFVTEQHHVPCIPPQPPSLFSS 295 HANGQCF TEQHH PCIPPQPPSL S Sbjct: 2631 HANGQCFATEQHHGPCIPPQPPSLACS 2551 Score = 30.9 bits (61), Expect(5) = 3e-32 Identities = 14/22 (63%), Positives = 14/22 (63%) Frame = -3 / -1 Query: 603 ALSCRRLVHRPRRG*CQRCSSS 538 A SC LV RPR *CQR S S Sbjct: 3899 AFSCLHLVRRPRPD*CQRYSFS 3834 Score = 29.0 bits (57), Expect(5) = 3e-32 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = -3 / -2 Query: 303 FSS*N**WRAL*GGNHLLGYIPSRMV 226 FS *N W+AL GGN LL PS + Sbjct: 2422 FSP*NQLWKALSGGNLLLDCTPSHKI 2345 Score = 28.6 bits (56), Expect(5) = 3e-32 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = -1 / -1 Query: 218 ALEAVAGGVREADEV 174 A+E VA GVREADEV Sbjct: 278 AVETVADGVREADEV 234 Score = 66.6 bits (139), Expect(4) = 8e-26 Identities = 31/51 (60%), Positives = 33/51 (64%) Frame = +1 / +1 Query: 370 CMDGKMMLLGWFKRNMGTRKSWSLSNARR*RPIKPPKNILASICQIFADWM 522 C GKM LL W KRNMG S SLSN R *R IK + LASICQI +WM Sbjct: 3376 CAVGKMTLLVWLKRNMGIGNSRSLSNVRH*RLIKLQMSTLASICQI*VEWM 3528 Score = 60.2 bits (125), Expect(4) = 8e-26 Identities = 22/27 (81%), Positives = 23/27 (85%) Frame = +1 / +1 Query: 295 RGKQRRWLWWNAGDMMLLGYKTLTICM 375 R +RRWLWWNAG MMLLG KTLTICM Sbjct: 2551 RTSERRWLWWNAGAMMLLGCKTLTICM 2631 Score = 29.0 bits (57), Expect(4) = 8e-26 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = +1 / +2 Query: 226 YHARGNVAEEMITAS*SSPSLILR 297 Y RG+ EE ITA *S P LILR Sbjct: 2345 YLVRGSAVEEKITA**SFP*LILR 2416 Score = 29.0 bits (57), Expect(4) = 8e-26 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = +1 / +3 Query: 538 GR*ASLASTSTRTMNQAATAESINT 612 G+* SLAS TRT NQ T +S T Sbjct: 3834 GK*VSLASIWTRTTNQVETTKSRGT 3908 Score = 68.4 bits (143), Expect(3) = 1e-20 Identities = 29/48 (60%), Positives = 33/48 (68%) Frame = -3 / -3 Query: 522 HPVRKDLAYTC*YVLRRLYRPLASRIRKRPGLSCSHVSFEPTQQHHLP 379 HP DLAYTC* +LY+P S IRKR +S SHVSF+P QQ HLP Sbjct: 3528 HPFHLDLAYTC*CAHLQLYQPSVSHIRKRSRISDSHVSFQPNQQCHLP 3385 Score = 51.0 bits (105), Expect(3) = 1e-20 Identities = 21/27 (77%), Positives = 23/27 (85%) Frame = -1 / -1 Query: 374 MQMVNVL*PSSIMSPAFHHNHLLCFPL 294 MQMVNVL PSSIM+PAFHH+HLL L Sbjct: 2630 MQMVNVLQPSSIMAPAFHHSHLLSLVL 2550 Score = 27.2 bits (53), Expect(3) = 1e-20 Identities = 9/11 (81%), Positives = 11/11 (100%) Frame = -2 / -3 Query: 559 MPEMLIFPVFT 527 MPE+LIFP+FT Sbjct: 3855 MPEILIFPIFT 3823 Score = 65.2 bits (136), Expect(2) = 4e-19 Identities = 31/52 (59%), Positives = 34/52 (65%) Frame = +2 / +2 Query: 368 FAWMGR*CCWVGSKETWEQESPGLFRMRDAKGR*SRRRTY*QVYAKSLRTGC 523 F +GR* CW G KETWE E LFRM D +G *S R +*QVYAKS GC Sbjct: 3374 FVQLGR*HCWFG*KETWESEILDLFRM*DTEG**SCR*AH*QVYAKSKWNGC 3529 Score = 55.1 bits (114), Expect(2) = 4e-19 Identities = 21/34 (61%), Positives = 27/34 (79%) Frame = +3 / +1 Query: 225 IPCERECSRGDDYRLIKLSIINFKRKTEKVVVVE 326 I CERECSRG+DYRLIKLSII+FK + + ++ Sbjct: 2344 ISCERECSRGEDYRLIKLSIIDFKVRNSNLSTIK 2445
>LOC_Os11g08830:12011.t00775:unspliced-genomic kelch motif family protein| Length = 944 Score = 52.4 bits (108), Expect = 5e-06 Identities = 20/31 (64%), Positives = 25/31 (80%) Frame = +3 / +2 Query: 225 IPCERECSRGDDYRLIKLSIINFKRKTEKVV 317 I CE ECSRG+DYRLIKLS+I+FK + +V Sbjct: 299 ISCESECSRGEDYRLIKLSLIDFKVRNSNLV 391 Score = 35.4 bits (71), Expect = 0.61 Identities = 16/25 (64%), Positives = 18/25 (72%) Frame = -1 / -2 Query: 296 LKINDGELYEAVIISSATFPLAWYR 222 LKIN G+LY+AVI SSA L YR Sbjct: 370 LKIN*GKLYQAVIFSSAALTLTRYR 296
>LOC_Os03g11220:12003.t00922:unspliced-genomic RPGR, putative, expressed| Length = 1541 Score = 34.5 bits (69), Expect = 1.2 Identities = 8/14 (57%), Positives = 11/14 (78%) Frame = +2 / +3 Query: 728 VSQGNVCCRCCICH 769 + GN+CC CC+CH Sbjct: 1449 ILDGNLCCSCCVCH 1490
>LOC_Os12g31340:12012.t02838:unspliced-genomic F-box domain containing protein, expressed| Length = 1694 Score = 30.9 bits (61), Expect(2) = 1.4 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = -1 / -1 Query: 782 PHQDHGRCSNGNTHSLER 729 PH HG C NTHSL + Sbjct: 1133 PHSAHGLCQPNNTHSLHK 1080 Score = 24.4 bits (47), Expect(2) = 1.4 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = -3 / -2 Query: 342 HHVPCIPPQPPSLFSS 295 HH +PP PPS SS Sbjct: 133 HHHHLLPPPPPSSSSS 86
>LOC_Os03g21759:12003.t01929:unspliced-genomic hypothetical protein| Length = 1009 Score = 34.1 bits (68), Expect = 1.6 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = -3 / -1 Query: 444 RKRPGLSCSHVSFEPTQQHHLPIHANGQCFVTEQHHVPCIP 322 R+R G S ++ EP ++ LP+H + F + CIP Sbjct: 925 RQRAGKEKSEMNREPLRETTLPMHGSEHAFAVPEQRCTCIP 803
>LOC_Os04g04220:12004.t00310:unspliced-genomic hypothetical protein| Length = 1633 Score = 25.8 bits (50), Expect(2) = 2.3 Identities = 7/11 (63%), Positives = 8/11 (72%) Frame = -3 / -3 Query: 342 HHVPCIPPQPP 310 H PC+PP PP Sbjct: 1361 HRRPCMPPHPP 1329 Score = 24.9 bits (48), Expect(2) = 2.3 Identities = 8/24 (33%), Positives = 15/24 (62%) Frame = -3 / -1 Query: 438 RPGLSCSHVSFEPTQQHHLPIHAN 367 RP +C H++ +HHLP+ ++ Sbjct: 1555 RPVPTCHHLTGLHLHRHHLPLRSH 1484
>LOC_Os09g25150:12009.t02195:unspliced-genomic dihydroflavonol-4-reductase, putative, expressed| Length = 3187 Score = 29.0 bits (57), Expect(2) = 2.5 Identities = 21/65 (32%), Positives = 27/65 (41%) Frame = -3 / +1 Query: 726 CYKAHSAETQALSHKTHAVVTATHSPALSTALTSRT*QSVYALSCRRLVHRPRRG*CQRC 547 C K ET+ + T A +T T S LS L +V RR RP+ Sbjct: 1111 C*KVLHCETEEVIT*T*ADLTLTTSGRLSFLLIRTGTATVRRWQSRRRARRPKSAASTSS 1290 Query: 546 SSSPC 532 SS+PC Sbjct: 1291 SSAPC 1305 Score = 26.3 bits (51), Expect(2) = 2.5 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -2 / +1 Query: 394 TTSSSHPCKWSMFCNRAASCPLHSTTTTFS 305 T+SSS PC WS C P T+++ S Sbjct: 1282 TSSSSAPCWWSARCCSRR*TPAPCTSSSTS 1371
>LOC_Os09g30438:12009.t003577:unspliced-genomic expressed protein| Length = 2352 Score = 33.1 bits (66), Expect = 3.0 Identities = 15/55 (27%), Positives = 28/55 (50%) Frame = +1 / -1 Query: 547 ASLASTSTRTMNQAATAESINTLSGATCQCRRQSRTVCRCYNSMSFMRQRLCFCT 711 AS + +TRT +A + + +G C+CRR++R + ++ R+R T Sbjct: 1593 ASSSGAATRTPGCSARSTGCSASAGRRCRCRRRARRATAPDSPTAYRRRRAAGAT 1429
>LOC_Os09g30414:12009.t02722:unspliced-genomic aspartic proteinase nepenthesin-2 precursor, putative, expressed| Length = 3154 Score = 33.1 bits (66), Expect = 3.0 Identities = 15/55 (27%), Positives = 28/55 (50%) Frame = +1 / +1 Query: 547 ASLASTSTRTMNQAATAESINTLSGATCQCRRQSRTVCRCYNSMSFMRQRLCFCT 711 AS + +TRT +A + + +G C+CRR++R + ++ R+R T Sbjct: 1564 ASSSGAATRTPGCSARSTGCSASAGRRCRCRRRARRATAPDSPTAYRRRRAAGAT 1728
>LOC_Os09g16449:12009.t01432:unspliced-genomic ATP-binding cassette transporter CGR1, putative, expressed| Length = 3365 Score = 33.1 bits (66), Expect = 3.0 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -2 / -3 Query: 454 VSHSKETRTFLFPCFF*TNPTTSSSHPCK 368 VS+SK + + F CFF T+ +SH C+ Sbjct: 1416 VSYSKNAKLYCFMCFFLTSKYLINSHDCR 1330
>LOC_Os02g17650:12002.t01558:unspliced-genomic tocopherol cyclase, chloroplast precursor, putative, expressed| Length = 8905 Score = 33.1 bits (66), Expect = 3.0 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 / -3 Query: 697 LCFCTVRFVASLSRECVLPLL 759 LC C V+FV LS C+LPL+ Sbjct: 6488 LCMCIVKFVNLLSDHCMLPLM 6426
>LOC_Os01g60140:12001.t05398:unspliced-genomic ATCHX15, putative, expressed| Length = 3220 Score = 33.1 bits (66), Expect = 3.0 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = +1 / +1 Query: 622 ATCQCRRQSRTVCRCY 669 ATC CRR SR CRC+ Sbjct: 2779 ATCSCRRTSRCRCRCW 2826
>LOC_Os07g47540:12007.t04390:unspliced-genomic expressed protein| Length = 1349 Score = 26.3 bits (51), Expect(2) = 3.1 Identities = 7/11 (63%), Positives = 8/11 (72%) Frame = -3 / -2 Query: 342 HHVPCIPPQPP 310 HH C+PP PP Sbjct: 1174 HHACCLPPPPP 1142 Score = 24.0 bits (46), Expect(2) = 3.1 Identities = 9/30 (30%), Positives = 14/30 (46%) Frame = -2 / -2 Query: 217 PWRP*QAESGRRMKWPEMAPEGSSAMDATP 128 P R + GRR++W M G ++ P Sbjct: 1078 PLRNSHVDDGRRLRWNRMLLHGRVTVNHAP 989
>LOC_Os04g51520:12004.t04629:unspliced-genomic xyloglucan endotransglycosylase/hydrolase protein 8 precursor,| putative, expressed Length = 3187 Score = 30.9 bits (61), Expect(2) = 3.4 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +1 / -3 Query: 556 ASTSTRTMNQAATAESINTLSGATCQCRRQSR 651 A STR ++ +TA + N+++G TC RR R Sbjct: 2843 ACPSTRRRSRTSTATTWNSVAGRTCTGRRHRR 2748 Score = 24.0 bits (46), Expect(2) = 3.4 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = +1 / -3 Query: 688 RQRLCFCTVRFVASL 732 R +CFCTV F SL Sbjct: 2225 RLLMCFCTVSFSLSL 2181
>LOC_Os10g17100:12010.t01271:unspliced-genomic hypothetical protein| Length = 1387 Score = 25.4 bits (49), Expect(3) = 3.7 Identities = 9/26 (34%), Positives = 14/26 (53%) Frame = +1 / -3 Query: 631 QCRRQSRTVCRCYNSMSFMRQRLCFC 708 +C R+ R+ RC ++ F LC C Sbjct: 440 RCHRRRRSARRCRSAAVFSPPLLCCC 363 Score = 24.0 bits (46), Expect(3) = 3.7 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = +3 / -3 Query: 138 SIALLPSGAISGHFIRLPDSACYGLQGTPIP 230 ++ L P GA+ ++ P S GL PIP Sbjct: 1010 NLRLRPDGALVVLHVQPPPSIAAGLNPGPIP 918 Score = 22.1 bits (42), Expect(3) = 3.7 Identities = 5/8 (62%), Positives = 6/8 (75%) Frame = +2 / -3 Query: 743 VCCRCCIC 766 +CC CC C Sbjct: 374 LCCCCCCC 351
>LOC_Os06g37410:12006.t03436:unspliced-genomic helix-loop-helix DNA-binding domain containing protein| Length = 3819 Score = 25.8 bits (50), Expect(3) = 3.7 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = -2 / -3 Query: 193 SGRRMKWPEMAPEG 152 +GRR +WP AP G Sbjct: 85 AGRRRRWPPPAPRG 44 Score = 24.9 bits (48), Expect(3) = 3.7 Identities = 9/23 (39%), Positives = 10/23 (43%) Frame = -3 / -1 Query: 378 IHANGQCFVTEQHHVPCIPPQPP 310 +HA G V H P PP P Sbjct: 417 LHARGALLVRPTRHAPARPPPCP 349 Score = 23.5 bits (45), Expect(3) = 3.7 Identities = 9/16 (56%), Positives = 9/16 (56%) Frame = -3 / -1 Query: 594 CRRLVHRPRRG*CQRC 547 C R VH R G QRC Sbjct: 3291 CHRAVHGLRHGFLQRC 3244
>LOC_Os09g17850:12009.t01570:unspliced-genomic acetyltransferase type B catalytic subunit, putative, expressed| Length = 4653 Score = 32.7 bits (65), Expect = 4.1 Identities = 9/16 (56%), Positives = 13/16 (81%) Frame = +1 / -1 Query: 277 SPSLILRGKQRRWLWW 324 +P L+ RG++RRW WW Sbjct: 147 APWLVRRGRRRRWWWW 100
>LOC_Os05g33020:12005.t02896:unspliced-genomic preprotein translocase secY subunit, putative, expressed| Length = 7360 Score = 32.7 bits (65), Expect = 4.1 Identities = 19/52 (36%), Positives = 26/52 (50%) Frame = -2 / -2 Query: 529 TTASSPQRFGIYLLICSSAALSAFSVSHSKETRTFLFPCFF*TNPTTSSSHP 374 +TA + R I L +SAALSA + S ++ F +P F P TS P Sbjct: 456 STAVTASRRRISLRKSASAALSATAPSRARSRNLFRYPAAFLALPPTSPPSP 301
>LOC_Os12g19350:12012.t01781:unspliced-genomic expressed protein| Length = 14375 Score = 31.3 bits (62), Expect(2) = 5.1 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = +1 / -1 Query: 613 LSGATCQCRRQSRTVCRCYNSMSFMRQRLCFC 708 L ATC V RCYN MS ++ + +C Sbjct: 1904 LGSATCSFSIMFSRVSRCYNLMSILKHIVIYC 1809 Score = 24.9 bits (48), Expect(2) = 5.1 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +3 / -2 Query: 390 VVGLVQKKHGNKKVLVSFECETLKADKAAEEHISKYM 500 + G Q + K L+S+ ETL A HIS Y+ Sbjct: 12529 LAGSYQYLN*KNKELLSYVLETLVAYSRLRNHISMYI 12419
>LOC_Os06g43540:12006.t04044:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 4384 Score = 25.4 bits (49), Expect(2) = 5.1 Identities = 17/55 (30%), Positives = 26/55 (47%) Frame = -2 / -3 Query: 457 SVSHSKETRTFLFPCFF*TNPTTSSSHPCKWSMFCNRAASCPLHSTTTTFSVFLL 293 S+S + + L+ + PT+SS S C+R + L+ TT S FLL Sbjct: 725 SLSPPPSSSSSLYELTIDSRPTSSSRAIVFTSRSCSREIATGLYFLGTTRSSFLL 561 Score = 24.0 bits (46), Expect(2) = 5.1 Identities = 8/18 (44%), Positives = 9/18 (50%) Frame = -3 / -1 Query: 585 LVHRPRRG*CQRCSSSPC 532 + HRP C C S PC Sbjct: 853 VTHRPCPDGCSGCQSCPC 800
>LOC_Os03g56270:12003.t04885:unspliced-genomic receptor protein kinase CLAVATA1 precursor, putative, expressed| Length = 4999 Score = 32.2 bits (64), Expect = 5.7 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = +1 / +1 Query: 538 GR*ASLASTSTRTMNQAATAESINTLSGATCQCRRQSRTVCRCYNS 675 GR S A+ + AA++ S + +G+ +CRR S V RC S Sbjct: 1135 GRTTSPAACRAASAAMAASSCSTSRRTGSPARCRRSSAPVARCTRS 1272
>LOC_Os02g28040:12002.t02498:unspliced-genomic triacylglycerol lipase, putative, expressed| Length = 9570 Score = 32.2 bits (64), Expect = 5.7 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = -3 / +2 Query: 345 QHHVPCIPPQPPSLF 301 QHH+PC PP PSL+ Sbjct: 1181 QHHLPCHPPSCPSLY 1225
>LOC_Os02g03440:12002.t00244:unspliced-genomic small nuclear ribonucleoprotein E, putative, expressed| Length = 2058 Score = 32.2 bits (64), Expect = 5.7 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = -1 / +1 Query: 410 LLNQPNNIIFPSMQMVNVL*PSSIMSPAFHHNHLLCF 300 ++ QP N+IF +Q V L P +++SP L+CF Sbjct: 139 IMTQPINLIFRFLQSVRALPPLAVLSPLPVSVLLVCF 249
>LOC_Os06g48320:12006.t04518:unspliced-genomic lipid binding protein, putative, expressed| Length = 3552 Score = 25.4 bits (49), Expect(3) = 5.7 Identities = 7/13 (53%), Positives = 9/13 (69%) Frame = +1 / +3 Query: 286 LILRGKQRRWLWW 324 L R ++RRW WW Sbjct: 159 LFRRRRRRRWRWW 197 Score = 24.9 bits (48), Expect(3) = 5.7 Identities = 12/36 (33%), Positives = 14/36 (38%) Frame = +1 / +1 Query: 601 SINTLSGATCQCRRQSRTVCRCYNSMSFMRQRLCFC 708 +IN L C+CR RC S R R C Sbjct: 460 TINLLVRFVCRCRGGRTRTARCSTSRRRRRSRRSRC 567 Score = 23.1 bits (44), Expect(3) = 5.7 Identities = 7/23 (30%), Positives = 15/23 (65%) Frame = +3 / +1 Query: 699 VFLHCALCSKSLKGMCVAVAASA 767 +++H C + L G+C+ V ++A Sbjct: 2956 LYIHNQSCLEKLLGLCIVV*STA 3024
>LOC_Os11g07912:12011.t004384:unspliced-genomic MLO-like protein 4, putative, expressed| Length = 4621 Score = 29.9 bits (59), Expect(2) = 6.3 Identities = 11/34 (32%), Positives = 18/34 (52%) Frame = -1 / -1 Query: 860 QKRVLLHF*LILTISSNKLQKNWP*FPHQDHGRC 759 QK +LLH + S+NK+ + W P + +C Sbjct: 2434 QKCILLHMPTVANCSTNKMLRTWRNMPAKHRTKC 2333 Score = 24.4 bits (47), Expect(2) = 6.3 Identities = 7/11 (63%), Positives = 8/11 (72%) Frame = -3 / -2 Query: 342 HHVPCIPPQPP 310 HH P +PP PP Sbjct: 252 HHPPPLPPPPP 220
>LOC_Os02g04780:12002.t00376:unspliced-genomic expressed protein| Length = 1662 Score = 26.3 bits (51), Expect(2) = 7.4 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = -3 / -1 Query: 369 NGQCFVTEQHHVPCIPPQPPS 307 N Q VTE +PC P PPS Sbjct: 507 NLQLSVTETTSLPCPPSPPPS 445 Score = 22.6 bits (43), Expect(2) = 7.4 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = -1 / -3 Query: 221 GALEAVAGGVREADEV 174 GA+ AVAGG+ D+V Sbjct: 373 GAVAAVAGGLGAEDDV 326
>LOC_Os11g08060:12011.t00697:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2952 Score = 29.9 bits (59), Expect(2) = 7.7 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = -3 / -3 Query: 366 GQCFVTEQHHVPCIPPQPP 310 G C V +HH C PP PP Sbjct: 58 GCCLVALRHHCLCSPPLPP 2 Score = 23.5 bits (45), Expect(2) = 7.7 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = -3 / -3 Query: 543 SSPCLQLHPVRKDLA 499 SSPCL +H RK A Sbjct: 142 SSPCLHIHGRRKPAA 98
>LOC_Os12g34650:12012.t03153:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6829 Score = 31.8 bits (63), Expect = 7.8 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = +3 / -2 Query: 294 KRKTEKVVVVECRGHDAARLQNIDHLHGWEDDVVG 398 KR E VV+ E + L I + W DDVVG Sbjct: 5898 KRLPEYVVLTEMKWATLVSLSTITQIESWPDDVVG 5794
>LOC_Os11g43910:12011.t03921:unspliced-genomic hypothetical protein| Length = 324 Score = 31.8 bits (63), Expect = 7.8 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +1 / +2 Query: 280 PSLILRGKQRRWLWWNAG 333 P+L G++RRW WW G Sbjct: 269 PTLCREGERRRWSWWRMG 322
>LOC_Os10g22540:12010.t01733:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3225 Score = 31.8 bits (63), Expect = 7.8 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = -2 / -2 Query: 403 TNPTTSSSHPCKWSMFCNRAASCPLHSTTTTFSVFLLKLMMESF 272 T+P SS PC +M C+ AA S + T + L L SF Sbjct: 2738 TSPADESSAPCSSAMLCSAAARRAARSPSPTAAPPLCALASSSF 2607
>LOC_Os08g04070:12008.t00302:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 1194 Score = 31.8 bits (63), Expect = 7.8 Identities = 11/36 (30%), Positives = 19/36 (52%) Frame = +1 / +3 Query: 607 NTLSGATCQCRRQSRTVCRCYNSMSFMRQRLCFCTV 714 N++ CR + T C CY+S ++++ L C V Sbjct: 414 NSIGCRESSCRGRRTTCCSCYSSKCYLQKSLIGCIV 521
>LOC_Os07g31060:12007.t02793:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3292 Score = 31.8 bits (63), Expect = 7.8 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = -2 / -2 Query: 403 TNPTTSSSHPCKWSMFCNRAASCPLHSTTTTFSVFLLKLMMESF 272 T+P SS PC+ +M C+ AA + S + + L L SF Sbjct: 2805 TSPADESSAPCRSAMVCSAAARRAVKSLSPAAAPLLRALASNSF 2674
>LOC_Os04g35010:12004.t03174:unspliced-genomic DNA binding protein, putative, expressed| Length = 4971 Score = 31.8 bits (63), Expect = 7.8 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -3 / +1 Query: 366 GQCFVTEQHHVPCIPPQPPS 307 G C V +HH C PP PPS Sbjct: 4258 GYCLVALRHHRLCSPPLPPS 4317
>LOC_Os04g08240:12004.t00694:unspliced-genomic hypothetical protein| Length = 1527 Score = 31.8 bits (63), Expect = 7.8 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -2 / -3 Query: 208 P*QAESGRRMKWPEMAPEGSSA 143 P ++ S RR WP MAP GSS+ Sbjct: 238 PARSSSSRRRGWPAMAPPGSSS 173
>LOC_Os03g56580:12003.t04917:unspliced-genomic NAC domain-containing protein 42, putative, expressed| Length = 2284 Score = 31.8 bits (63), Expect = 7.8 Identities = 17/41 (41%), Positives = 27/41 (65%) Frame = +1 / +2 Query: 541 R*ASLASTSTRTMNQAATAESINTLSGATCQCRRQSRTVCR 663 R*A+ A+TS+ T + ATA + ++GA + RR+SR+ R Sbjct: 1628 R*AATAATSSTTASITATATTSFIVNGAPYKWRRRSRSRSR 1750
>LOC_Os01g04120:12001.t00300:unspliced-genomic expressed protein| Length = 4344 Score = 31.8 bits (63), Expect = 7.8 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = +3 / -2 Query: 621 CDLSMPSTKQDCVSLLQQHEFYATALVFLHCALCS 725 C + +P K+ C++ Q+ E A ++ HC CS Sbjct: 179 CKVELPC*KKSCLTYNQKEEGIAMHSLYTHCNFCS 75
>LOC_Os04g08764:12004.t00745:unspliced-genomic avr9/Cf-9 rapidly elicited protein 137, putative, expressed| Length = 2152 Score = 27.6 bits (54), Expect(2) = 7.8 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -2 / -3 Query: 721 QSAQCRNTSAVA*NSCCCNSD 659 QSA RN+S +A SCC S+ Sbjct: 1499 QSAAARNSSRLATGSCCAPSE 1437 Score = 25.4 bits (49), Expect(2) = 7.8 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -3 / -3 Query: 597 SCRRLVHRPRRG*CQRCS 544 +CR RPRRG* +R S Sbjct: 383 ACRGAPRRPRRG*ARRAS 330
>LOC_Os12g27590:12012.t02471:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1653 Score = 30.4 bits (60), Expect(2) = 8.4 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = -3 / +1 Query: 57 DGRHSPACPTESPSFTP 7 DGRH+P CP PS +P Sbjct: 1150 DGRHNPFCPRVPPSSSP 1200 Score = 22.1 bits (42), Expect(2) = 8.4 Identities = 13/49 (26%), Positives = 17/49 (34%) Frame = -3 / +3 Query: 531 LQLHPVRKDLAYTC*YVLRRLYRPLASRIRKRPGLSCSHVSFEPTQQHH 385 L L V + C + Y S + P L C V +QHH Sbjct: 921 LHLSLVFASKGWRCHCFAFQTYPSSQSHALQSPSLQCDEVDLV*DRQHH 1067
>LOC_Os05g51570:12005.t04582:unspliced-genomic vacuolar processing enzyme precursor, putative, expressed| Length = 1655 Score = 29.0 bits (57), Expect(2) = 8.4 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -2 / +2 Query: 736 LRDLLQSAQCRNTSAVA*NSCCCNSDTQS 650 L+D S C++ AV+ CCC+S S Sbjct: 92 LQDRSSSTTCQSWGAVSSACCCCSSSASS 178 Score = 23.5 bits (45), Expect(2) = 8.4 Identities = 6/9 (66%), Positives = 8/9 (88%) Frame = -3 / +2 Query: 333 PCIPPQPPS 307 PC PP+PP+ Sbjct: 779 PCTPPRPPT 805
>LOC_Os04g45240:12004.t04059:unspliced-genomic expressed protein| Length = 9702 Score = 26.3 bits (51), Expect(2) = 8.6 Identities = 8/12 (66%), Positives = 8/12 (66%) Frame = -3 / -3 Query: 345 QHHVPCIPPQPP 310 QHH P PP PP Sbjct: 3892 QHHRPAAPPPPP 3857 Score = 22.1 bits (42), Expect(2) = 8.6 Identities = 6/15 (40%), Positives = 10/15 (66%) Frame = -3 / -3 Query: 423 CSHVSFEPTQQHHLP 379 C++++ P QHH P Sbjct: 3922 CNNLAMLPPMQHHRP 3878 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 366,583,382 Number of extensions: 5938542 Number of successful extensions: 32255 Number of sequences better than 10.0: 41 Length of query: 319 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 269 Effective length of database: 52,799,986 Effective search space: 14203196234 Effective search space used: 14203196234 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
