Clone Name | FLbaf96a10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | Q9FWT5:RIP3_ORYSJ Ripening-related protein 3 precursor - Oryza s... | 31 | 6.5 | 2 | Q06542:Y4090_STRCO Uncharacterized protein SCO4090 - Streptomyce... | 31 | 8.5 | 3 | P53248:PEX8_YEAST Peroxisomal biogenesis factor 8 - Saccharomyce... | 31 | 8.5 |
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>Q9FWT5:RIP3_ORYSJ Ripening-related protein 3 precursor - Oryza sativa subsp. japonica| (Rice) Length = 213 Score = 31.2 bits (69), Expect = 6.5 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = -2 Query: 739 PLRDLLQSAQCRNTSAVA*NSCCCNSDTQS-CFVDGI 632 P R LLQS+ C+ + A+ S CN+D S C DG+ Sbjct: 44 PHRSLLQSSSCQPSGAITGTSGDCNADNGSECCQDGV 80
>Q06542:Y4090_STRCO Uncharacterized protein SCO4090 - Streptomyces coelicolor| Length = 283 Score = 30.8 bits (68), Expect = 8.5 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 17/69 (24%) Frame = -3 Query: 474 RLYRPLAS----------RIRKRPG-------LSCSHVSFEPTQQHHLPIHANGQCFVTE 346 R+Y PLA+ R +RPG L S PT +P+H + FVTE Sbjct: 16 RVYEPLAAFPDEERAHWTRYARRPGRPSYQDELRRSLADLLPTPPVAVPVHESADAFVTE 75 Query: 345 QHHVPCIPP 319 V C+ P Sbjct: 76 VDGVVCVCP 84
>P53248:PEX8_YEAST Peroxisomal biogenesis factor 8 - Saccharomyces cerevisiae (Baker's| yeast) Length = 589 Score = 30.8 bits (68), Expect = 8.5 Identities = 18/53 (33%), Positives = 28/53 (52%) Frame = +3 Query: 276 LSIINFKRKTEKVVVVECRGHDAARLQNIDHLHGWEDDVVGLVQKKHGNKKVL 434 + I+N K +K V++EC A + N HL GW + + L+ NKK+L Sbjct: 508 IRIVNVKNPEKKNVLIECLIVQIAFINNPHHLIGWLNICLQLINTH--NKKLL 558 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 145,382,465 Number of extensions: 2904746 Number of successful extensions: 8063 Number of sequences better than 10.0: 3 Number of HSP's gapped: 8055 Number of HSP's successfully gapped: 3 Length of query: 319 Length of database: 100,686,439 Length adjustment: 113 Effective length of query: 206 Effective length of database: 69,691,104 Effective search space: 14356367424 Effective search space used: 14356367424 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)