>Q56B11:PELP1_RAT Proline-, glutamic acid- and leucine-rich protein 1 - Rattus|
           norvegicus (Rat)
          Length = 1130
 Score = 34.7 bits (78), Expect = 1.1
 Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +3

Query: 84  PPPVS--AATTDSPPPPRAGDGGELPTLSGPVPTP 182
           PPPV+     T SPP P   D  ELP   GP+P P
Sbjct: 818 PPPVAPIGPPTASPPVPAKEDSEELPATPGPLPPP 852

>Q9DBD5:PELP1_MOUSE Proline-, glutamic acid- and leucine-rich protein 1 - Mus musculus|
           (Mouse)
          Length = 1123

 Score = 34.3 bits (77), Expect = 1.4
 Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
 Frame = +3

Query: 84  PPPVSAA--TTDSPPPPRAGDGGELPTLSGPVPTPATRMTAAEG 209
           PPP + A   T SPP P   D  ELP   GP P P      A G
Sbjct: 813 PPPAAPAGPPTASPPVPAKEDSEELPATPGPPPPPPPPPPPASG 856

>O60610:DIAP1_HUMAN Protein diaphanous homolog 1 - Homo sapiens (Human)|
          Length = 1248

 Score = 33.9 bits (76), Expect = 1.9
 Identities = 19/55 (34%), Positives = 24/55 (43%)
 Frame = +3

Query: 84  PPPVSAATTDSPPPPRAGDGGELPTLSGPVPTPATRMTAAEGSYLGWCSTTPSTP 248
           PPP+   T  SPPPP +GD     T+  P P P      +  S  G  +  P  P
Sbjct: 609 PPPLPGGTAISPPPPLSGDA----TIPPPPPLPEGVGIPSPSSLPGGTAIPPPPP 659

>Q8I7Z8:HAM_DROME Transcription factor hamlet - Drosophila melanogaster (Fruit fly)|
          Length = 990

 Score = 33.5 bits (75), Expect = 2.4
 Identities = 24/55 (43%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +3

Query: 87  PPVSAATTDSPPPPRAGDGGELPTLS--GPVPTPATRMTAAEGSYLGWCSTTPST 245
           P  S   T SP PP +  GGEL + S  G VPT A    AA+ S L    T P T
Sbjct: 699 PTASPGLTPSPSPPTS-AGGELSSTSEGGAVPTMAAAAFAADHSALASGPTLPQT 752

>Q1W6H9:F110C_HUMAN Protein FAM110C - Homo sapiens (Human)|
          Length = 321

 Score = 33.1 bits (74), Expect = 3.2
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
 Frame = +3

Query: 111 DSPPPPRAGDGGE------LPTLSGPVPTPATRMTAAEGSYLGWCSTTPSTP 248
           D  P PR GD G+      +PT  GP   PAT  T A  +     S+ P+ P
Sbjct: 133 DKAPVPRTGDEGKAGNPETVPTTPGPAADPATPETPAPAARSAAPSSVPAAP 184

>Q2NHG2:DP2L_METST DNA polymerase II large subunit - Methanosphaera stadtmanae (strain|
            DSM 3091)
          Length = 1117

 Score = 33.1 bits (74), Expect = 3.2
 Identities = 37/168 (22%), Positives = 66/168 (39%), Gaps = 17/168 (10%)
 Frame = +2

Query: 689  LYGLLDFDEEISFPHDLNGLPRGYDKRKSKFCDEPNILTAKSLLVE------ILQTLKGM 850
            LY L+D  E++ F  D+N +P  Y KR  +    P+ +  KSL++       ++  L   
Sbjct: 507  LYSLIDSPEDV-FKSDMNRIPIDYHKRIIEVLGIPHHVNNKSLIMSNDNLYTLMSVLNKS 565

Query: 851  FWPFQSNRSSSL--FLNAVAANHHGPGNVGGSQARSHGNISAIEMAAAKSAQHRL----- 1009
              P +   +      ++ V+     P  +GG   R       +     K A H L     
Sbjct: 566  LSPDEDMETIEAVNMISPVSIKSKAPTYIGGRVGRPEKTKERL----MKPAPHSLFPIGN 621

Query: 1010 ----MRGVWTNVRFGDMRRALAACERLILLNHNPCELRDYAALLYHCG 1141
                +R +    + G ++  LA C+      +  C++  + AL   CG
Sbjct: 622  YAGNIRNIVEAAKKGTIKVTLAKCK----CTNPDCKVSSFKALCPVCG 665

>Q1LRA4:OSTA_RALME LPS-assembly protein precursor - Ralstonia metallidurans (strain|
           CH34 / ATCC 43123 / DSM 2839)
          Length = 824

 Score = 32.7 bits (73), Expect = 4.2
 Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +3

Query: 81  LPPPVSAATTDSPPPPRAGDGGELPTLSGPVPTPATRMTAAEGSYLGWC-STTPSTP 248
           L  PV   T ++PPPP  G G  +P L+     PATR TA  G+ L    S+TPS P
Sbjct: 61  LVEPVVTQTPEAPPPPAEG-GDLVPRLT----EPATR-TAPSGNTLNLSPSSTPSNP 111

>O70566:DIAP2_MOUSE Protein diaphanous homolog 2 - Mus musculus (Mouse)|
          Length = 1098

 Score = 32.7 bits (73), Expect = 4.2
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +3

Query: 84  PPPVSAATTDSPPPPRAGDGGELPTLSGPVPTP 182
           PPP  +     PPPP    GG  P LSGP+  P
Sbjct: 592 PPPPLSGVPPPPPPP----GGVFPLLSGPIELP 620

>Q1W1Y5:PELP1_MACMU Proline-, glutamic acid- and leucine-rich protein 1 - Macaca|
           mulatta (Rhesus macaque)
          Length = 1130

 Score = 32.3 bits (72), Expect = 5.4
 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 10/43 (23%)
 Frame = +3

Query: 84  PPPVSAAT----------TDSPPPPRAGDGGELPTLSGPVPTP 182
           PPP S AT          T SPP P   +  ELP   GP+P P
Sbjct: 800 PPPPSGATPPPIAPTGPPTASPPVPAKEEPEELPAAPGPLPPP 842

>Q8IZL8:PELP1_HUMAN Proline-, glutamic acid- and leucine-rich protein 1 - Homo sapiens|
           (Human)
          Length = 1130

 Score = 32.3 bits (72), Expect = 5.4
 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 10/43 (23%)
 Frame = +3

Query: 84  PPPVSAAT----------TDSPPPPRAGDGGELPTLSGPVPTP 182
           PPP S AT          T SPP P   +  ELP   GP+P P
Sbjct: 800 PPPPSGATPPPIAPTGPPTASPPVPAKEEPEELPAAPGPLPPP 842

>O53426:PRA_MYCTU Proline-rich antigen homolog - Mycobacterium tuberculosis|
          Length = 240

 Score = 32.0 bits (71), Expect = 7.1
 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
 Frame = +3

Query: 84  PPPVSAATTDSPPPPRAGDGGELPT------LSGPVPTPATRMTAAEGSYLGW 224
           PPP S+ +   PPPP  G G   P        + P P PA R    E SY  W
Sbjct: 40  PPPPSSGSGYPPPPPPPGGGAYPPPPPSAGGYAPPPPGPAIRTMPTE-SYTPW 91

>P20128:POLR_TYMVA RNA replicase polyprotein - Turnip yellow mosaic virus (isolate|
           Australia)
          Length = 1844

 Score = 32.0 bits (71), Expect = 7.1
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 81  LPPPVSAATTDSPPPPRAGDGGELPTLSGPVPTP-ATRMTAAEGSYLGWCSTTPSTP 248
           LPP  ++ +   PPP  +  G + PT +   PTP      A + S L   S+TP  P
Sbjct: 592 LPPAFASTSVPRPPPVASSLGAQPPTTTAAPPTPIEPTQRAHQNSDLTLESSTPIEP 648

>Q69ZB8:ZCHC2_MOUSE Zinc finger CCHC domain-containing protein 2 - Mus musculus (Mouse)|
          Length = 1168

 Score = 31.6 bits (70), Expect = 9.2
 Identities = 15/34 (44%), Positives = 16/34 (47%)
 Frame = +3

Query: 69  RRCVLPPPVSAATTDSPPPPRAGDGGELPTLSGP 170
           R C  PPP +      PPPP    G E P  SGP
Sbjct: 41  RDCRPPPPPTGLPRGPPPPPSPPRGLEPPVASGP 74

>P24583:KPC1_YEAST Protein kinase C-like 1 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 1151

 Score = 31.6 bits (70), Expect = 9.2
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
 Frame = +3

Query: 1299 DLLQVTG-----PKTLSHGRSYTHLTDQCIYSTN*DMDVQQI-VHIIVPWTFANNYEMGL 1460
            D L+ TG      K L H + YT++  +CI  T+ D D  +  ++  +P  F      G 
Sbjct: 433  DFLRYTGFQCQDCKFLCHKKCYTNVVTKCIAKTSTDTDPDEAKLNHRIPHRFLPTSNRGT 492

Query: 1461 KFWCRC 1478
            K+ C C
Sbjct: 493  KWCCHC 498


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 228,986,258
Number of extensions: 4660278
Number of successful extensions: 16535
Number of sequences better than 10.0: 14
Number of HSP's gapped: 15854
Number of HSP's successfully gapped: 14
Length of query: 508
Length of database: 100,686,439
Length adjustment: 118
Effective length of query: 390
Effective length of database: 68,319,629
Effective search space: 26644655310
Effective search space used: 26644655310
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)