ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf98c22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001049246.1| Oryza sativa (japonica cultivar-group) Os01g0272800 (Os01g0272800) mRNA, complete cds Length = 1302 Score = 761 bits (384), Expect = 0.0 Identities = 902/1072 (84%), Gaps = 2/1072 (0%) Strand = Plus / Plus Query: 218 cggatggtgctccacgactccctcgacgccgcgggggtcgtc-actgaccacgctagggc 276 ||||||||||| |||||||| ||||| | |||||||| ||| || || ||||| ||||| Sbjct: 175 cggatggtgctgcacgactcgctcgagggggcgggggt-gtcgaccgagcacgcgagggc 233 Query: 277 ggcgagggaggggtttgcgacgcagatcgggaggctcacgaggctcaacgcggagaccag 336 ||||||||||||||| |||| |||| |||||||||| ||| |||| |||| |||||||| Sbjct: 234 ggcgagggaggggttcgcgaagcaggtcgggaggctgacgcggctggacgccgagaccag 293 Query: 337 catcgccatcagccgcggcgccgatctcgctcgggccgcgctctgtatcgcggccgagga 396 ||||||||||||||||||||| || ||||| || ||||||||||| |||| |||||||| Sbjct: 294 catcgccatcagccgcggcgcggacctcgcccgcgccgcgctctgcgtcgccgccgagga 353 Query: 397 cgactcgctcgtctcccactcttccgtgccgctccccgtagacgccttcattgctcgcct 456 ||||||||||||||||||||| ||||||||||||||||| || |||||| | | ||||| Sbjct: 354 cgactcgctcgtctcccactcctccgtgccgctccccgtcgaggccttcgtctcccgcct 413 Query: 457 tgacgatctttccaccgggttcctcgccgcggggttcctcccgccctccggagcgccgcc 516 ||||| || |||||||| |||||||||| || | |||||||||| |||| |||||||| Sbjct: 414 cgacgacctctccaccggcttcctcgccgacggctacctcccgcccgccggcgcgccgcc 473 Query: 517 cgaggtcttcttggaccacctcgaccgctacctctacgtccacaagggttttcgaagaac 576 | |||||||| | ||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 474 ccaggtcttcctcgaccacctcgaccgctacctctacgtccacaaggggtttcggagaaa 533 Query: 577 aaacgtagcatcagatgctcgggccatgtatcttcactcgactttgacatgccgatcagg 636 ||| | | | ||||||| ||||| || |||||||||||| | |||| ||||| | || Sbjct: 534 aaatggatcgtcagatgggcgggcaatatatcttcactcggttctgacgtgccggttggg 593 Query: 637 atcagctctaatgctttccttgatatattcagagatgctaaagacactacggctgtatgg 696 ||||||||||||||| || |||||||| || ||||| || |||| ||||| ||||||| Sbjct: 594 atcagctctaatgctctcgttgatatactccgagatactgaagatgctacgattgtatgg 653 Query: 697 cttactagacttcgatgaggagatctcctttccacatgatctcaatggcctccctagggg 756 |||||| || ||| ||| |||||| | |||||||||||||||||| | || |||||||| Sbjct: 654 cttactggaattcaatgtggagattttctttccacatgatctcaacagtctgcctagggg 713 Query: 757 ctatgacaaacgaaaaagcaagttttgtgatgaaccaaatattttgacagcaaagtcact 816 |||||||||| ||||||||||| | |||||||| ||||| ||||| |||||||||| Sbjct: 714 ttatgacaaacacaaaagcaagttgggcgatgaaccgcatattatgacatcaaagtcact 773 Query: 817 tttggttgagattttacaaactctgaagggtatgttttggccgttccagtctaaccggtc 876 ||||||||||||||| ||||||||||| || |||||||| |||||||| |||| ||| Sbjct: 774 tttggttgagattttgaaaactctgaagaatacattttggcctttccagtccaaccagtc 833 Query: 877 aagtagcttatttttgaatgctgttgctgcaaaccaccatggccctggtaatgtaggcgg 936 ||||||||||||| ||||||||| |||||||||| |||||||||||||||||||| | Sbjct: 834 tggtagcttatttttaaatgctgtttctgcaaaccaacatggccctggtaatgtaggtga 893 Query: 937 cagtcaagcaaggtcacatggcaatataagtgccatagagatggctgctgctaaatctgc 996 | |||| ||| | ||||||||||||||||| ||||||||||||||||||| ||| |||| Sbjct: 894 taatcaaacaacgccacatggcaatataagtaccatagagatggctgctgcaaaagctgc 953 Query: 997 tcaacataggttgatgcgtggagtatggactaatgtgcgcttcggtgacatgcgtcgtgc 1056 |||||||||||||||||||||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 954 tcaacataggttgatgcgtggagtatggactaatgtccggtttggtgatatgcggcgtgc 1013 Query: 1057 tttggcagcttgcgagagactgatcctactgaatcacaatccctgtgaacttagggacta 1116 ||| ||||| || || |||| ||||||||||| ||| ||||| ||||||| ||||| || Sbjct: 1014 tttagcagcatgtgaacgacttatcctactgaaccacgatccccgtgaactgagggatta 1073 Query: 1117 tgctgcccttctgtaccactgtggctactacaaagagtgcctgcagtacttaacgtcgta 1176 ||| |||||||| ||||||||||| ||||| |||| |||||||| ||||| | || || Sbjct: 1074 tgccgcccttctctaccactgtgggtactatgaagactgcctgcaatacttggcatcata 1133 Query: 1177 ccaaaatgccatggttggacagccccggaccaatccactagagatgttggaggacgacgc 1236 ||||| || ||| ||| |||| ||| |||||| || ||||| |||||||||| || Sbjct: 1134 ccaaaccgcagtggctgggcagcattggaacaatccgctggagatcatggaggacgaagc 1193 Query: 1237 agtgaacactcttatggcacgagtaaacctaattttagcagaggacggctgg 1288 |||||||| || | || || |||| | | |||||||||||||| |||||| Sbjct: 1194 ggtgaacaccctgagagcgcgggtaagcttgattttagcagaggatggctgg 1245
>dbj|AK242815.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090061O05, full insert sequence Length = 780 Score = 400 bits (202), Expect = e-108 Identities = 481/574 (83%) Strand = Plus / Plus Query: 715 ggagatctcctttccacatgatctcaatggcctccctaggggctatgacaaacgaaaaag 774 |||||| | |||||||||||||||||| | || |||||||| |||||||||| ||||| Sbjct: 2 ggagattttctttccacatgatctcaacagtctgcctaggggttatgacaaacacaaaag 61 Query: 775 caagttttgtgatgaaccaaatattttgacagcaaagtcacttttggttgagattttaca 834 |||||| | |||||||| ||||| ||||| ||||||||||||||||||||||||| | Sbjct: 62 caagttgggcgatgaaccgcatattatgacatcaaagtcacttttggttgagattttgaa 121 Query: 835 aactctgaagggtatgttttggccgttccagtctaaccggtcaagtagcttatttttgaa 894 |||||||||| || |||||||| |||||||| |||| ||| ||||||||||||| || Sbjct: 122 aactctgaagaatacattttggcctttccagtccaaccagtctggtagcttatttttaaa 181 Query: 895 tgctgttgctgcaaaccaccatggccctggtaatgtaggcggcagtcaagcaaggtcaca 954 ||||||| |||||||||| |||||||||||||||||||| | | |||| ||| | |||| Sbjct: 182 tgctgtttctgcaaaccaacatggccctggtaatgtaggtgataatcaaacaacgccaca 241 Query: 955 tggcaatataagtgccatagagatggctgctgctaaatctgctcaacataggttgatgcg 1014 ||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 242 tggcaatataagtaccatagagatggctgctgcaaaagctgctcaacataggttgatgcg 301 Query: 1015 tggagtatggactaatgtgcgcttcggtgacatgcgtcgtgctttggcagcttgcgagag 1074 |||||||||||||||||| || || ||||| ||||| |||||||| ||||| || || | Sbjct: 302 tggagtatggactaatgtccggtttggtgatatgcggcgtgctttagcagcatgtgaacg 361 Query: 1075 actgatcctactgaatcacaatccctgtgaacttagggactatgctgcccttctgtacca 1134 ||| ||||||||||| ||| ||||| ||||||| ||||| ||||| |||||||| ||||| Sbjct: 362 acttatcctactgaaccacgatccccgtgaactgagggattatgccgcccttctctacca 421 Query: 1135 ctgtggctactacaaagagtgcctgcagtacttaacgtcgtaccaaaatgccatggttgg 1194 |||||| ||||| |||| |||||||| ||||| | || ||||||| || ||| ||| Sbjct: 422 ctgtgggtactatgaagactgcctgcaatacttggcatcataccaaaccgcagtggctgg 481 Query: 1195 acagccccggaccaatccactagagatgttggaggacgacgcagtgaacactcttatggc 1254 |||| ||| |||||| || ||||| |||||||||| || |||||||| || | || Sbjct: 482 gcagcattggaacaatccgctggagatcatggaggacgaagcggtgaacaccctgagagc 541 Query: 1255 acgagtaaacctaattttagcagaggacggctgg 1288 || |||| | | |||||||||||||| |||||| Sbjct: 542 gcgggtaagcttgattttagcagaggatggctgg 575
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 315 bits (159), Expect = 3e-82 Identities = 302/347 (87%), Gaps = 2/347 (0%) Strand = Plus / Minus Query: 218 cggatggtgctccacgactccctcgacgccgcgggggtcgtc-actgaccacgctagggc 276 ||||||||||| |||||||| ||||| | |||||||| ||| || || ||||| ||||| Sbjct: 9434658 cggatggtgctgcacgactcgctcgagggggcgggggt-gtcgaccgagcacgcgagggc 9434600 Query: 277 ggcgagggaggggtttgcgacgcagatcgggaggctcacgaggctcaacgcggagaccag 336 ||||||||||||||| |||| |||| |||||||||| ||| |||| |||| |||||||| Sbjct: 9434599 ggcgagggaggggttcgcgaagcaggtcgggaggctgacgcggctggacgccgagaccag 9434540 Query: 337 catcgccatcagccgcggcgccgatctcgctcgggccgcgctctgtatcgcggccgagga 396 ||||||||||||||||||||| || ||||| || ||||||||||| |||| |||||||| Sbjct: 9434539 catcgccatcagccgcggcgcggacctcgcccgcgccgcgctctgcgtcgccgccgagga 9434480 Query: 397 cgactcgctcgtctcccactcttccgtgccgctccccgtagacgccttcattgctcgcct 456 ||||||||||||||||||||| ||||||||||||||||| || |||||| | | ||||| Sbjct: 9434479 cgactcgctcgtctcccactcctccgtgccgctccccgtcgaggccttcgtctcccgcct 9434420 Query: 457 tgacgatctttccaccgggttcctcgccgcggggttcctcccgccctccggagcgccgcc 516 ||||| || |||||||| |||||||||| || | |||||||||| |||| |||||||| Sbjct: 9434419 cgacgacctctccaccggcttcctcgccgacggctacctcccgcccgccggcgcgccgcc 9434360 Query: 517 cgaggtcttcttggaccacctcgaccgctacctctacgtccacaagg 563 | |||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 9434359 ccaggtcttcctcgaccacctcgaccgctacctctacgtccacaagg 9434313 Score = 143 bits (72), Expect = 2e-30 Identities = 162/192 (84%) Strand = Plus / Minus Query: 635 ggatcagctctaatgctttccttgatatattcagagatgctaaagacactacggctgtat 694 ||||||||||||||||| || |||||||| || ||||| || |||| ||||| ||||| Sbjct: 9433102 ggatcagctctaatgctctcgttgatatactccgagatactgaagatgctacgattgtat 9433043 Query: 695 ggcttactagacttcgatgaggagatctcctttccacatgatctcaatggcctccctagg 754 |||||||| || ||| ||| |||||| | |||||||||||||||||| | || |||||| Sbjct: 9433042 ggcttactggaattcaatgtggagattttctttccacatgatctcaacagtctgcctagg 9432983 Query: 755 ggctatgacaaacgaaaaagcaagttttgtgatgaaccaaatattttgacagcaaagtca 814 || |||||||||| ||||||||||| | |||||||| ||||| ||||| |||||||| Sbjct: 9432982 ggttatgacaaacacaaaagcaagttgggcgatgaaccgcatattatgacatcaaagtca 9432923 Query: 815 cttttggttgag 826 |||||||||||| Sbjct: 9432922 cttttggttgag 9432911 Score = 127 bits (64), Expect = 1e-25 Identities = 88/96 (91%) Strand = Plus / Minus Query: 969 ccatagagatggctgctgctaaatctgctcaacataggttgatgcgtggagtatggacta 1028 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 9431691 ccatagagatggctgctgcaaaagctgctcaacataggttgatgcgtggagtatggacta 9431632 Query: 1029 atgtgcgcttcggtgacatgcgtcgtgctttggcag 1064 |||| || || ||||| ||||| |||||||| |||| Sbjct: 9431631 atgtccggtttggtgatatgcggcgtgctttagcag 9431596 Score = 115 bits (58), Expect = 5e-22 Identities = 121/142 (85%) Strand = Plus / Minus Query: 825 agattttacaaactctgaagggtatgttttggccgttccagtctaaccggtcaagtagct 884 ||||||| ||||||||||| || |||||||| |||||||| |||| ||| |||||| Sbjct: 9431931 agattttgaaaactctgaagaatacattttggcctttccagtccaaccagtctggtagct 9431872 Query: 885 tatttttgaatgctgttgctgcaaaccaccatggccctggtaatgtaggcggcagtcaag 944 ||||||| ||||||||| |||||||||| |||||||||||||||||||| | | |||| Sbjct: 9431871 tatttttaaatgctgtttctgcaaaccaacatggccctggtaatgtaggtgataatcaaa 9431812 Query: 945 caaggtcacatggcaatataag 966 ||| | |||||||||||||||| Sbjct: 9431811 caacgccacatggcaatataag 9431790 Score = 83.8 bits (42), Expect = 2e-12 Identities = 81/94 (86%) Strand = Plus / Minus Query: 1074 gactgatcctactgaatcacaatccctgtgaacttagggactatgctgcccttctgtacc 1133 |||| ||||||||||| ||| ||||| ||||||| ||||| ||||| |||||||| |||| Sbjct: 9431219 gacttatcctactgaaccacgatccccgtgaactgagggattatgccgcccttctctacc 9431160 Query: 1134 actgtggctactacaaagagtgcctgcagtactt 1167 ||||||| ||||| |||| |||||||| ||||| Sbjct: 9431159 actgtgggtactatgaagactgcctgcaatactt 9431126
>dbj|AP001081.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0693B08 Length = 140812 Score = 315 bits (159), Expect = 3e-82 Identities = 302/347 (87%), Gaps = 2/347 (0%) Strand = Plus / Minus Query: 218 cggatggtgctccacgactccctcgacgccgcgggggtcgtc-actgaccacgctagggc 276 ||||||||||| |||||||| ||||| | |||||||| ||| || || ||||| ||||| Sbjct: 104985 cggatggtgctgcacgactcgctcgagggggcgggggt-gtcgaccgagcacgcgagggc 104927 Query: 277 ggcgagggaggggtttgcgacgcagatcgggaggctcacgaggctcaacgcggagaccag 336 ||||||||||||||| |||| |||| |||||||||| ||| |||| |||| |||||||| Sbjct: 104926 ggcgagggaggggttcgcgaagcaggtcgggaggctgacgcggctggacgccgagaccag 104867 Query: 337 catcgccatcagccgcggcgccgatctcgctcgggccgcgctctgtatcgcggccgagga 396 ||||||||||||||||||||| || ||||| || ||||||||||| |||| |||||||| Sbjct: 104866 catcgccatcagccgcggcgcggacctcgcccgcgccgcgctctgcgtcgccgccgagga 104807 Query: 397 cgactcgctcgtctcccactcttccgtgccgctccccgtagacgccttcattgctcgcct 456 ||||||||||||||||||||| ||||||||||||||||| || |||||| | | ||||| Sbjct: 104806 cgactcgctcgtctcccactcctccgtgccgctccccgtcgaggccttcgtctcccgcct 104747 Query: 457 tgacgatctttccaccgggttcctcgccgcggggttcctcccgccctccggagcgccgcc 516 ||||| || |||||||| |||||||||| || | |||||||||| |||| |||||||| Sbjct: 104746 cgacgacctctccaccggcttcctcgccgacggctacctcccgcccgccggcgcgccgcc 104687 Query: 517 cgaggtcttcttggaccacctcgaccgctacctctacgtccacaagg 563 | |||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 104686 ccaggtcttcctcgaccacctcgaccgctacctctacgtccacaagg 104640 Score = 143 bits (72), Expect = 2e-30 Identities = 162/192 (84%) Strand = Plus / Minus Query: 635 ggatcagctctaatgctttccttgatatattcagagatgctaaagacactacggctgtat 694 ||||||||||||||||| || |||||||| || ||||| || |||| ||||| ||||| Sbjct: 103429 ggatcagctctaatgctctcgttgatatactccgagatactgaagatgctacgattgtat 103370 Query: 695 ggcttactagacttcgatgaggagatctcctttccacatgatctcaatggcctccctagg 754 |||||||| || ||| ||| |||||| | |||||||||||||||||| | || |||||| Sbjct: 103369 ggcttactggaattcaatgtggagattttctttccacatgatctcaacagtctgcctagg 103310 Query: 755 ggctatgacaaacgaaaaagcaagttttgtgatgaaccaaatattttgacagcaaagtca 814 || |||||||||| ||||||||||| | |||||||| ||||| ||||| |||||||| Sbjct: 103309 ggttatgacaaacacaaaagcaagttgggcgatgaaccgcatattatgacatcaaagtca 103250 Query: 815 cttttggttgag 826 |||||||||||| Sbjct: 103249 cttttggttgag 103238 Score = 127 bits (64), Expect = 1e-25 Identities = 88/96 (91%) Strand = Plus / Minus Query: 969 ccatagagatggctgctgctaaatctgctcaacataggttgatgcgtggagtatggacta 1028 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 102018 ccatagagatggctgctgcaaaagctgctcaacataggttgatgcgtggagtatggacta 101959 Query: 1029 atgtgcgcttcggtgacatgcgtcgtgctttggcag 1064 |||| || || ||||| ||||| |||||||| |||| Sbjct: 101958 atgtccggtttggtgatatgcggcgtgctttagcag 101923 Score = 115 bits (58), Expect = 5e-22 Identities = 121/142 (85%) Strand = Plus / Minus Query: 825 agattttacaaactctgaagggtatgttttggccgttccagtctaaccggtcaagtagct 884 ||||||| ||||||||||| || |||||||| |||||||| |||| ||| |||||| Sbjct: 102258 agattttgaaaactctgaagaatacattttggcctttccagtccaaccagtctggtagct 102199 Query: 885 tatttttgaatgctgttgctgcaaaccaccatggccctggtaatgtaggcggcagtcaag 944 ||||||| ||||||||| |||||||||| |||||||||||||||||||| | | |||| Sbjct: 102198 tatttttaaatgctgtttctgcaaaccaacatggccctggtaatgtaggtgataatcaaa 102139 Query: 945 caaggtcacatggcaatataag 966 ||| | |||||||||||||||| Sbjct: 102138 caacgccacatggcaatataag 102117 Score = 83.8 bits (42), Expect = 2e-12 Identities = 81/94 (86%) Strand = Plus / Minus Query: 1074 gactgatcctactgaatcacaatccctgtgaacttagggactatgctgcccttctgtacc 1133 |||| ||||||||||| ||| ||||| ||||||| ||||| ||||| |||||||| |||| Sbjct: 101546 gacttatcctactgaaccacgatccccgtgaactgagggattatgccgcccttctctacc 101487 Query: 1134 actgtggctactacaaagagtgcctgcagtactt 1167 ||||||| ||||| |||| |||||||| ||||| Sbjct: 101486 actgtgggtactatgaagactgcctgcaatactt 101453
>gb|AC136226.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0067H15, complete sequence Length = 184316 Score = 48.1 bits (24), Expect = 0.094 Identities = 57/68 (83%) Strand = Plus / Plus Query: 635 ggatcagctctaatgctttccttgatatattcagagatgctaaagacactacggctgtat 694 ||||||| | |||||||||| ||||||||||| ||||| || |||| |||||| | || Sbjct: 85739 ggatcagatataatgctttcgttgatatattctgagatactgaagatgctacggttatac 85798 Query: 695 ggcttact 702 |||||||| Sbjct: 85799 ggcttact 85806
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 48.1 bits (24), Expect = 0.094 Identities = 57/68 (83%) Strand = Plus / Plus Query: 635 ggatcagctctaatgctttccttgatatattcagagatgctaaagacactacggctgtat 694 ||||||| | |||||||||| ||||||||||| ||||| || |||| |||||| | || Sbjct: 6960816 ggatcagatataatgctttcgttgatatattctgagatactgaagatgctacggttatac 6960875 Query: 695 ggcttact 702 |||||||| Sbjct: 6960876 ggcttact 6960883 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 ctcgacgccgcgggggtcgtc 259 ||||||||||||||||||||| Sbjct: 14487839 ctcgacgccgcgggggtcgtc 14487859
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 1.5 Identities = 76/94 (80%) Strand = Plus / Plus Query: 724 ctttccacatgatctcaatggcctccctaggggctatgacaaacgaaaaagcaagttttg 783 |||| ||||||||| ||| |||| |||||||| ||||| |||| |||| |||||| | Sbjct: 26621806 cttttcacatgatcccaacagccttcctaggggttatgagaaacacaaaaacaagttggg 26621865 Query: 784 tgatgaaccaaatattttgacagcaaagtcactt 817 | |||||| ||||| ||||| ||||||||||| Sbjct: 26621866 caaagaaccacatattatgacatcaaagtcactt 26621899
>gb|AC078909.7| Homo sapiens chromosome 15, clone RP11-128A17, complete sequence Length = 170257 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 655 cttgatatattcagagatgctaaaga 680 |||||||||||||||||||| ||||| Sbjct: 77970 cttgatatattcagagatgcaaaaga 77945
>gb|AC079889.20| Oryza sativa chromosome 3 BAC OSJNBa0092M19 genomic sequence, complete sequence Length = 136712 Score = 44.1 bits (22), Expect = 1.5 Identities = 76/94 (80%) Strand = Plus / Plus Query: 724 ctttccacatgatctcaatggcctccctaggggctatgacaaacgaaaaagcaagttttg 783 |||| ||||||||| ||| |||| |||||||| ||||| |||| |||| |||||| | Sbjct: 53297 cttttcacatgatcccaacagccttcctaggggttatgagaaacacaaaaacaagttggg 53356 Query: 784 tgatgaaccaaatattttgacagcaaagtcactt 817 | |||||| ||||| ||||| ||||||||||| Sbjct: 53357 caaagaaccacatattatgacatcaaagtcactt 53390
>ref|NM_001061710.1| Oryza sativa (japonica cultivar-group) Os05g0316400 (Os05g0316400) mRNA, partial cds Length = 1465 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 ctcgacgccgcgggggtcgtc 259 ||||||||||||||||||||| Sbjct: 967 ctcgacgccgcgggggtcgtc 947
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 42.1 bits (21), Expect = 5.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 226 gctccacgactccctcgacgccgcg 250 |||||||||| |||||||||||||| Sbjct: 2783650 gctccacgacgccctcgacgccgcg 2783626
>gb|AC186548.3| Gallus gallus BAC clone TAM33-7F21 from chromosome z, complete sequence Length = 150358 Score = 42.1 bits (21), Expect = 5.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1117 tgctgcccttctgtaccactgtggc 1141 |||||||||||||| |||||||||| Sbjct: 74797 tgctgcccttctgtcccactgtggc 74821
>gb|AC124141.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0065C11, complete sequence Length = 141578 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 ctcgacgccgcgggggtcgtc 259 ||||||||||||||||||||| Sbjct: 25844 ctcgacgccgcgggggtcgtc 25864
>ref|XM_676241.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8064.2), mRNA Length = 1197 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1040 ggtgacatgcgtcgtgctttg 1060 ||||||||||||||||||||| Sbjct: 739 ggtgacatgcgtcgtgctttg 759
>gb|AC161602.4| Mus musculus BAC clone RP23-336I5 from chromosome 6, complete sequence Length = 224158 Score = 42.1 bits (21), Expect = 5.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 102 gccaccacggattctcctcctcccc 126 ||||||| ||||||||||||||||| Sbjct: 212999 gccaccagggattctcctcctcccc 212975
>emb|CR788317.5| Zebrafish DNA sequence from clone DKEY-97L24 in linkage group 13, complete sequence Length = 46813 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 gagggaggggtttgcgacgca 300 ||||||||||||||||||||| Sbjct: 21641 gagggaggggtttgcgacgca 21621
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 gcatcgccatcagccgcggcg 356 ||||||||||||||||||||| Sbjct: 1565141 gcatcgccatcagccgcggcg 1565161
>gb|AC104339.10| Homo sapiens chromosome 8, clone RP11-777J24, complete sequence Length = 194212 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 899 gttgctgcaaaccaccatggc 919 ||||||||||||||||||||| Sbjct: 56381 gttgctgcaaaccaccatggc 56401
>dbj|AK108681.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-B06, full insert sequence Length = 1465 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 ctcgacgccgcgggggtcgtc 259 ||||||||||||||||||||| Sbjct: 967 ctcgacgccgcgggggtcgtc 947
>gb|AC144600.3| Didelphis virginiana clone LB3-100O6, complete sequence Length = 182571 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1402 aacaaattgtacatataattg 1422 ||||||||||||||||||||| Sbjct: 129579 aacaaattgtacatataattg 129599
>gb|AC138620.4| Mus musculus BAC clone RP23-250E1 from 6, complete sequence Length = 209846 Score = 42.1 bits (21), Expect = 5.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 102 gccaccacggattctcctcctcccc 126 ||||||| ||||||||||||||||| Sbjct: 111543 gccaccagggattctcctcctcccc 111567
>dbj|AB074982.1| Homo sapiens gene for MTG8b, partial cds Length = 15784 Score = 42.1 bits (21), Expect = 5.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 899 gttgctgcaaaccaccatggc 919 ||||||||||||||||||||| Sbjct: 5992 gttgctgcaaaccaccatggc 5972 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 230,984,189 Number of extensions: 11573516 Number of successful extensions: 233950 Number of sequences better than 10.0: 22 Number of HSP's gapped: 233947 Number of HSP's successfully gapped: 31 Length of query: 1524 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1501 Effective length of database: 18,503,978,556 Effective search space: 27774471812556 Effective search space used: 27774471812556 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
