ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf96a01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK070942: | 79 | 4e-15 | 2 | Os10g0489700:Os10g0489700 | 75 | 5e-14 | 3 | Os01g0582600:Os01g0582600 | 29 | 2.5 | 4 | AK120510: | 29 | 2.5 | 5 | Os11g0243400:Os11g0243400 | 29 | 3.2 | 6 | AK107417:Os03g0654700 | 28 | 7.2 | 7 | AK073810:Os01g0739000 | 27 | 9.4 | 8 | AK069568:Os01g0739000 | 27 | 9.4 | 9 | AK065794:Os05g0524300 | 27 | 9.4 |
|---|
>AK070942: | Length = 75 Score = 78.6 bits (192), Expect = 4e-15 Identities = 41/75 (54%), Positives = 45/75 (60%) Frame = +1 Query: 61 MARGDSCLXXXXXXXXXXXXXXXXXXXXXXXXXXXRLRVPGLLKIRHIGQATVGSAAVFG 240 MAR DSCL R +VPGLLKIR+IGQ TVGSAA+FG Sbjct: 1 MARSDSCLARVGAGVAIGGAVGGAVGAVYGTYEAIRYKVPGLLKIRYIGQTTVGSAAIFG 60 Query: 241 LFLGAGSLIHCGKNY 285 LFLGAGSLIHCGK+Y Sbjct: 61 LFLGAGSLIHCGKSY 75
>Os10g0489700:Os10g0489700 | Length = 85 Score = 74.7 bits (182), Expect = 5e-14 Identities = 34/40 (85%), Positives = 38/40 (95%) Frame = +1 Query: 166 RLRVPGLLKIRHIGQATVGSAAVFGLFLGAGSLIHCGKNY 285 R +VPGLLKIR+IGQ TVGSAA+FGLFLGAGSLIHCGK+Y Sbjct: 46 RYKVPGLLKIRYIGQTTVGSAAIFGLFLGAGSLIHCGKSY 85
>Os01g0582600:Os01g0582600 | Length = 551 Score = 29.3 bits (64), Expect = 2.5 Identities = 16/63 (25%), Positives = 34/63 (53%) Frame = -2 Query: 261 ASSSEEKPEYCSAADSGLSDVSDLQQPRDPQSDSGISPINSTDGSADRAADCDSGADARQ 82 A +EE + AAD+ +++ L+ D +S + + +GS D AA+ D+ A +++ Sbjct: 98 ALEAEEHSDRAGAADASRRELALLESNADHKSQAMMDYYAKMEGSFDAAAESDATARSKR 157 Query: 81 AAI 73 + + Sbjct: 158 SRL 160
>AK120510: | Length = 632 Score = 29.3 bits (64), Expect = 2.5 Identities = 16/63 (25%), Positives = 34/63 (53%) Frame = -2 Query: 261 ASSSEEKPEYCSAADSGLSDVSDLQQPRDPQSDSGISPINSTDGSADRAADCDSGADARQ 82 A +EE + AAD+ +++ L+ D +S + + +GS D AA+ D+ A +++ Sbjct: 98 ALEAEEHSDRAGAADASRRELALLESNADHKSQAMMDYYAKMEGSFDAAAESDATARSKR 157 Query: 81 AAI 73 + + Sbjct: 158 SRL 160
>Os11g0243400:Os11g0243400 | Length = 1080 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 7/51 (13%) Frame = -2 Query: 516 MTSIQQNVFSHESCF-------HHLPLIQMTKDFISTSTVRQTYQKLGPSK 385 +TS +NV++H ++L I + K F++ V+ TY+ L PSK Sbjct: 188 VTSCVRNVWTHRKIALQIRRVNYNLQRISIDKTFLALENVKATYRVLAPSK 238
>AK107417:Os03g0654700 | Length = 360 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 5/68 (7%) Frame = -2 Query: 261 ASSSEEKPEYCSAADSGLSDVSDLQQP-----RDPQSDSGISPINSTDGSADRAADCDSG 97 A + + E ++A + + +++P RDP D G S ++ TDG + +D D Sbjct: 36 APKTVTESESSASASASMEPEEQVEEPAKKRKRDPAPDVGSSSMDGTDG---QGSDDDKN 92 Query: 96 ADARQAAI 73 D +A + Sbjct: 93 DDGEEAPV 100
>AK073810:Os01g0739000 | Length = 499 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = -2 Query: 276 PAVYQASSSEEKPEYCSAADSGLSDVSDLQQPRDPQS 166 P + A+S E E S A+ LSD+ +++P +P+S Sbjct: 248 PRMVLAASGVEHDELVSIAEPLLSDLPSVKRPEEPKS 284
>AK069568:Os01g0739000 | Length = 499 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = -2 Query: 276 PAVYQASSSEEKPEYCSAADSGLSDVSDLQQPRDPQS 166 P + A+S E E S A+ LSD+ +++P +P+S Sbjct: 248 PRMVLAASGVEHDELVSIAEPLLSDLPSVKRPEEPKS 284
>AK065794:Os05g0524300 | Length = 494 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = -2 Query: 276 PAVYQASSSEEKPEYCSAADSGLSDVSDLQQPRDPQS 166 P + A+S E E S A+ LSD+ +++P +P+S Sbjct: 243 PRMVLAASGIEHDELVSVAEPLLSDLPSVKRPEEPKS 279 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,635,285 Number of extensions: 313258 Number of successful extensions: 835 Number of sequences better than 10.0: 9 Number of HSP's gapped: 835 Number of HSP's successfully gapped: 9 Length of query: 222 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 125 Effective length of database: 11,515,878 Effective search space: 1439484750 Effective search space used: 1439484750 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
