Clone Name | FLbaf96a01 |
---|---|
Clone Library Name | barley_pub |
>LOC_Os06g50510:12006.t04735:unspliced-genomic START domain containing protein| Length = 8759 Score = 32.7 bits (65), Expect = 2.7 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 / -1 Query: 177 PWVAEDQTHRTSHCRQRCSIRAFPRSWKLD 266 PW + Q R + CR CS+ + R+WK D Sbjct: 7022 PWSSPQQHSRCN*CR*SCSMASLLRAWKQD 6933
>LOC_Os02g05480:12002.t00446:unspliced-genomic OsMPK14 - putative MAPK based on amino acid sequence homology,| expressed Length = 3384 Score = 32.7 bits (65), Expect = 2.7 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -3 / +3 Query: 281 FFPQCIKLPAPRKSPNTAALPTVACPMCLI 192 F+ +C L P++S + L T+ CP+C+I Sbjct: 2820 FYRRCSYLILPKESVSPRLLSTLTCPLCMI 2909
>LOC_Os10g07290:12010.t00588:unspliced-genomic glucan endo-1,3-beta-glucosidase 7 precursor, putative, expressed| Length = 2529 Score = 31.8 bits (63), Expect = 5.0 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +3 / +1 Query: 303 PLLLLGFKGLSA*SICLIFKEHWSSATIYSVLAFDMFALLLM 428 P ++ G K ICL+ HWS A +S+ F LL++ Sbjct: 1972 PAIMQGKKNFQWHMICLLLFPHWSFAPFWSLAEVFPFVLLVL 2097
>LOC_Os12g13010:12012.t01169:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 4418 Score = 29.5 bits (58), Expect(2) = 6.5 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +3 / -2 Query: 174 GPWVAEDQTHRTSHCRQRCSI 236 GP ++ Q+H+ HC Q+C I Sbjct: 1618 GPTISGLQSHKLKHCPQQCEI 1556 Score = 23.5 bits (45), Expect(2) = 6.5 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = +1 / -3 Query: 526 SSVKEIDHFLPTLTGARGSWPLVNIVY 606 +SV ++ HF + G+ L NIVY Sbjct: 1224 NSVHDVRHFFNQIFYHSGNTKLTNIVY 1144
>LOC_Os02g17760:12002.t01570:unspliced-genomic cytochrome P450 71D8, putative, expressed| Length = 6687 Score = 31.3 bits (62), Expect = 6.9 Identities = 11/43 (25%), Positives = 23/43 (53%) Frame = +3 / -2 Query: 177 PWVAEDQTHRTSHCRQRCSIRAFPRSWKLDTLREKLLTRVKSP 305 PW + T R S Q C + +F +++++++K+ + SP Sbjct: 5423 PWCGLEATCRRSRSTQMCQMTSFGSGLRMESVQQKVPMKPNSP 5295
>LOC_Os08g29710:12008.t02724:unspliced-genomic beta-1,3-galactosyltransferase sqv-2, putative, expressed| Length = 5945 Score = 31.3 bits (62), Expect = 6.9 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = -2 / -2 Query: 663 FFFFGLSQNCCLYL 622 FFFF LSQ CCL L Sbjct: 79 FFFFSLSQTCCLLL 38
>LOC_Os08g23360:12008.t02108:unspliced-genomic signal recognition particle 68 kDa protein, putative, expressed| Length = 11937 Score = 31.3 bits (62), Expect = 6.9 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +2 / -1 Query: 344 HLFDL*GTLEFCYYLLGPSF*Y 409 H D+ TLE C YLL PSF*+ Sbjct: 1248 HFDDIIKTLEICQYLLCPSF*F 1183
>LOC_Os08g04920:12008.t00386:unspliced-genomic expressed protein| Length = 6397 Score = 31.3 bits (62), Expect = 6.9 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +2 / -3 Query: 557 RH*PGRGAAGLLLISCTSCTPIK 625 R * G+G GL+ I C SCT +K Sbjct: 1988 RE*QGKGMQGLMSIFCNSCTSLK 1920
>LOC_Os05g45950:12005.t04083:unspliced-genomic outer mitochondrial membrane protein porin, putative, expressed| Length = 3497 Score = 26.3 bits (51), Expect(2) = 7.2 Identities = 10/37 (27%), Positives = 19/37 (51%) Frame = +3 / -2 Query: 198 THRTSHCRQRCSIRAFPRSWKLDTLREKLLTRVKSPL 308 TH +HC +CS + P K T ++L + ++ + Sbjct: 532 THTHTHCPPKCSYQQTPTRSKPKTKPNQILVKEQNKI 422 Score = 26.3 bits (51), Expect(2) = 7.2 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +2 / -2 Query: 506 IEVICHSHQ*KK*TIFSRH 562 I+ IC SHQ KK T S+H Sbjct: 310 IQEICKSHQKKKTTSVSKH 254
>LOC_Os11g29000:12011.t02510:unspliced-genomic pollen signalling protein with adenylyl cyclase activity, putative,| expressed Length = 2985 Score = 30.9 bits (61), Expect = 9.5 Identities = 12/21 (57%), Positives = 12/21 (57%) Frame = +3 / +3 Query: 177 PWVAEDQTHRTSHCRQRCSIR 239 P V EDQTH S C RC R Sbjct: 2199 PRVGEDQTHPASECLYRCGRR 2261
>LOC_Os06g32540:12006.t02952:unspliced-genomic hypothetical protein| Length = 430 Score = 30.9 bits (61), Expect = 9.5 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -2 / +2 Query: 207 SDVSDLQQPRDPQSDSGISPINSTDGSAD 121 SDV+DL P DP + S + P DG D Sbjct: 245 SDVNDLNPPEDPNNISVLHPAFIDDGDID 331
>LOC_Os05g05780:12005.t00468:unspliced-genomic chromatin remodelling complex ATPase chain, putative, expressed| Length = 10457 Score = 30.9 bits (61), Expect = 9.5 Identities = 16/55 (29%), Positives = 22/55 (40%) Frame = -2 / -1 Query: 258 SSSEEKPEYCSAADSGLSDVSDLQQPRDPQSDSGISPINSTDGSADRAADCDSGA 94 SSS P CS++ S S P DS S ++ SA + C S + Sbjct: 539 SSSSSSPAPCSSSTSSSSSSPSASASSSPTLDSSSSSSSTCSPSASPSTSCSSSS 375 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 222,699,037 Number of extensions: 3219205 Number of successful extensions: 11633 Number of sequences better than 10.0: 12 Length of query: 222 Length of database: 55,613,886 Length adjustment: 48 Effective length of query: 174 Effective length of database: 52,912,542 Effective search space: 9206782308 Effective search space used: 9206782308 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)