ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf96a01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK070942.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067J04, full insert sequence Length = 451 Score = 212 bits (107), Expect = 1e-51 Identities = 188/215 (87%) Strand = Plus / Plus Query: 58 gcgatggcgaggggcgatagctgcttggcgcgcatcggcgccggagtcgcaatcggcggc 117 |||||||||||| |||| ||||||||||||||| |||||||||| ||||| ||||||||| Sbjct: 100 gcgatggcgaggagcgacagctgcttggcgcgcgtcggcgccggggtcgccatcggcggc 159 Query: 118 gcggtcggcggagccgtcggtgctgtttatgggacttatgccgctatcagattgagggtc 177 ||||||||||| |||||||||||||| ||||||||||||| |||||||||| | |||| Sbjct: 160 gcggtcggcggggccgtcggtgctgtctatgggacttatgaggctatcagatacaaggtc 219 Query: 178 cctgggttgctgaagatcagacacatcggacaagccactgtcggcagcgctgcagtattc 237 ||||| ||||||||||||||| |||| ||||| |||| || || || |||||| |||| Sbjct: 220 cctggcttgctgaagatcagatacattggacagaccaccgttggtagtgctgcaatattt 279 Query: 238 gggcttttcctcggagctggaagcttgatacactg 272 || |||||||| ||||| || |||||||||||||| Sbjct: 280 ggacttttcctgggagccgggagcttgatacactg 314
>gb|AY104822.1| Zea mays PCO131452 mRNA sequence Length = 558 Score = 135 bits (68), Expect = 2e-28 Identities = 179/216 (82%) Strand = Plus / Plus Query: 60 gatggcgaggggcgatagctgcttggcgcgcatcggcgccggagtcgcaatcggcggcgc 119 |||||||||| | || |||||| |||||||| | || |||||||| || ||||| ||||| Sbjct: 137 gatggcgaggagtgacagctgcctggcgcgcgtgggtgccggagttgcgatcggtggcgc 196 Query: 120 ggtcggcggagccgtcggtgctgtttatgggacttatgccgctatcagattgagggtccc 179 |||||||||||||||||||||| |||||| |||| || || |||||| | | |||| Sbjct: 197 ggtcggcggagccgtcggtgcttgttatggaacttttgaggcattcagatacaagatccc 256 Query: 180 tgggttgctgaagatcagacacatcggacaagccactgtcggcagcgctgcagtattcgg 239 ||| ||||| ||||||||||| ||||| ||| | ||||| |||||||||||| | || || Sbjct: 257 tggattgctaaagatcagacatatcgggcaaactactgttggcagcgctgcaatttttgg 316 Query: 240 gcttttcctcggagctggaagcttgatacactgcgg 275 ||||||| | || ||||| |||||||| |||||||| Sbjct: 317 gcttttcttgggggctgggagcttgattcactgcgg 352
>ref|NM_001071455.1| Oryza sativa (japonica cultivar-group) Os10g0489700 (Os10g0489700) mRNA, complete cds Length = 258 Score = 103 bits (52), Expect = 8e-19 Identities = 115/136 (84%) Strand = Plus / Plus Query: 137 gtgctgtttatgggacttatgccgctatcagattgagggtccctgggttgctgaagatca 196 ||||||| ||||||||||||| |||||||||| | ||||||||| ||||||||||||| Sbjct: 107 gtgctgtctatgggacttatgaggctatcagatacaaggtccctggcttgctgaagatca 166 Query: 197 gacacatcggacaagccactgtcggcagcgctgcagtattcgggcttttcctcggagctg 256 || |||| ||||| |||| || || || |||||| |||| || |||||||| ||||| | Sbjct: 167 gatacattggacagaccaccgttggtagtgctgcaatatttggacttttcctgggagccg 226 Query: 257 gaagcttgatacactg 272 | |||||||||||||| Sbjct: 227 ggagcttgatacactg 242
>gb|AC146481.2| Oryza sativa chromosome 10 B1288B10 genomic sequence, complete sequence Length = 58734 Score = 77.8 bits (39), Expect = 5e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 174 ggtccctgggttgctgaagatcagacacatcggacaagccactgtcggcagcgctgcagt 233 ||||||||| ||||||||||||||| |||| ||||| |||| || || || |||||| | Sbjct: 44756 ggtccctggcttgctgaagatcagatacattggacagaccaccgttggtagtgctgcaat 44815 Query: 234 attcgggcttttcctcggagctggaagcttgatacactg 272 ||| || |||||||| ||||| || |||||||||||||| Sbjct: 44816 atttggacttttcctgggagccgggagcttgatacactg 44854 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Plus Query: 136 ggtgctgtttatgggacttatgccgctatcagat 169 |||||||| ||||||||||||| |||||||||| Sbjct: 44288 ggtgctgtctatgggacttatgaggctatcagat 44321
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 77.8 bits (39), Expect = 5e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 174 ggtccctgggttgctgaagatcagacacatcggacaagccactgtcggcagcgctgcagt 233 ||||||||| ||||||||||||||| |||| ||||| |||| || || || |||||| | Sbjct: 18072623 ggtccctggcttgctgaagatcagatacattggacagaccaccgttggtagtgctgcaat 18072682 Query: 234 attcgggcttttcctcggagctggaagcttgatacactg 272 ||| || |||||||| ||||| || |||||||||||||| Sbjct: 18072683 atttggacttttcctgggagccgggagcttgatacactg 18072721 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Plus Query: 136 ggtgctgtttatgggacttatgccgctatcagat 169 |||||||| ||||||||||||| |||||||||| Sbjct: 18072155 ggtgctgtctatgggacttatgaggctatcagat 18072188 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 gaggagcgcggcggcggcggc 48 ||||||||||||||||||||| Sbjct: 12616240 gaggagcgcggcggcggcggc 12616220 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 ggaggagcgcggcggcggcgg 47 ||||||||||||||||||||| Sbjct: 16135760 ggaggagcgcggcggcggcgg 16135740 Score = 40.1 bits (20), Expect = 9.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 21 gggaacggaggagcgcggcggcggcggc 48 ||||||||||||| |||||||||||||| Sbjct: 10236343 gggaacggaggag-gcggcggcggcggc 10236317 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ggcggcggcggcaagggaga 56 |||||||||||||||||||| Sbjct: 14006168 ggcggcggcggcaagggaga 14006187
>ref|NM_001065487.1| Oryza sativa (japonica cultivar-group) Os07g0163000 (Os07g0163000) mRNA, partial cds Length = 2790 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 cggaggagcgcggcggcggcgg 47 |||||||||||||||||||||| Sbjct: 60 cggaggagcgcggcggcggcgg 39
>ref|NM_001054832.1| Oryza sativa (japonica cultivar-group) Os02g0778600 (Os02g0778600) mRNA, complete cds Length = 2276 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 ggaggagcgcggcggcggcggc 48 |||||||||||||||||||||| Sbjct: 134 ggaggagcgcggcggcggcggc 113
>gb|BC047143.1| Mus musculus cDNA clone IMAGE:6396398 Length = 1893 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 ggaggagcgcggcggcggcggc 48 |||||||||||||||||||||| Sbjct: 257 ggaggagcgcggcggcggcggc 236
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 gaggagcgcggcggcggcggca 49 |||||||||||||||||||||| Sbjct: 161770 gaggagcgcggcggcggcggca 161749
>gb|AC145323.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018N12, complete sequence Length = 137127 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 ggaggagcgcggcggcggcggc 48 |||||||||||||||||||||| Sbjct: 79128 ggaggagcgcggcggcggcggc 79107
>ref|XM_858058.1| PREDICTED: Canis familiaris similar to glutamate receptor, ionotropic, AMPA4 (alpha 4), transcript variant 9 (LOC489427), mRNA Length = 2655 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 gcggtcggcggagccgtcggtg 139 |||||||||||||||||||||| Sbjct: 2088 gcggtcggcggagccgtcggtg 2109
>ref|XM_858034.1| PREDICTED: Canis familiaris similar to glutamate receptor, ionotropic, AMPA4 (alpha 4), transcript variant 8 (LOC489427), mRNA Length = 2721 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 gcggtcggcggagccgtcggtg 139 |||||||||||||||||||||| Sbjct: 2154 gcggtcggcggagccgtcggtg 2175
>ref|XM_845998.1| PREDICTED: Canis familiaris similar to glutamate receptor, ionotropic, AMPA4 (alpha 4), transcript variant 2 (LOC489427), mRNA Length = 3125 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 gcggtcggcggagccgtcggtg 139 |||||||||||||||||||||| Sbjct: 2088 gcggtcggcggagccgtcggtg 2109
>ref|XM_546545.2| PREDICTED: Canis familiaris similar to glutamate receptor, ionotropic, AMPA4 (alpha 4), transcript variant 1 (LOC489427), mRNA Length = 2796 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 gcggtcggcggagccgtcggtg 139 |||||||||||||||||||||| Sbjct: 2088 gcggtcggcggagccgtcggtg 2109
>ref|XM_857958.1| PREDICTED: Canis familiaris similar to glutamate receptor, ionotropic, AMPA4 (alpha 4), transcript variant 7 (LOC489427), mRNA Length = 3266 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 gcggtcggcggagccgtcggtg 139 |||||||||||||||||||||| Sbjct: 2088 gcggtcggcggagccgtcggtg 2109
>ref|XM_857933.1| PREDICTED: Canis familiaris similar to glutamate receptor, ionotropic, AMPA4 (alpha 4), transcript variant 6 (LOC489427), mRNA Length = 3062 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 gcggtcggcggagccgtcggtg 139 |||||||||||||||||||||| Sbjct: 2088 gcggtcggcggagccgtcggtg 2109
>ref|XM_857883.1| PREDICTED: Canis familiaris similar to glutamate receptor, ionotropic, AMPA4 (alpha 4), transcript variant 4 (LOC489427), mRNA Length = 2655 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 gcggtcggcggagccgtcggtg 139 |||||||||||||||||||||| Sbjct: 2088 gcggtcggcggagccgtcggtg 2109
>ref|XM_857863.1| PREDICTED: Canis familiaris similar to glutamate receptor, ionotropic, AMPA4 (alpha 4), transcript variant 3 (LOC489427), mRNA Length = 3125 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 gcggtcggcggagccgtcggtg 139 |||||||||||||||||||||| Sbjct: 2088 gcggtcggcggagccgtcggtg 2109
>dbj|AK002927.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610043C19 product:casein kinase II, alpha 2, polypeptide, full insert sequence Length = 1891 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 ggaggagcgcggcggcggcggc 48 |||||||||||||||||||||| Sbjct: 271 ggaggagcgcggcggcggcggc 250
>dbj|AK076042.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610528F04 product:casein kinase II, alpha 2, polypeptide, full insert sequence Length = 1461 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 ggaggagcgcggcggcggcggc 48 |||||||||||||||||||||| Sbjct: 224 ggaggagcgcggcggcggcggc 203
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 ggaggagcgcggcggcggcggc 48 |||||||||||||||||||||| Sbjct: 5078585 ggaggagcgcggcggcggcggc 5078606 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 acggaggagcgcggcggcggcggca 49 ||||||| ||||||||||||||||| Sbjct: 2929546 acggaggcgcgcggcggcggcggca 2929522
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 cggaggagcgcggcggcggcgg 47 |||||||||||||||||||||| Sbjct: 3402111 cggaggagcgcggcggcggcgg 3402132 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 gaggagcgcggcggcggcgg 47 |||||||||||||||||||| Sbjct: 20396408 gaggagcgcggcggcggcgg 20396427
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 cggaggagcgcggcggcggcgg 47 |||||||||||||||||||||| Sbjct: 26800265 cggaggagcgcggcggcggcgg 26800244 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 ggaggagcgcggcggcggcggc 48 |||||||||||||||||||||| Sbjct: 32980597 ggaggagcgcggcggcggcggc 32980576
>ref|NM_009974.2| Mus musculus casein kinase 2, alpha prime polypeptide (Csnk2a2), mRNA emb|AJ001420.1|MMCK2ALPH Mus musculus mRNA for CK2 alpha subunit Length = 1877 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 ggaggagcgcggcggcggcggc 48 |||||||||||||||||||||| Sbjct: 233 ggaggagcgcggcggcggcggc 212
>gb|AC078916.19| Homo sapiens 12 BAC RP11-463C23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172678 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 ggaggagcgcggcggcggcggc 48 |||||||||||||||||||||| Sbjct: 6283 ggaggagcgcggcggcggcggc 6262
>gb|AC102555.11| Mus musculus chromosome 8, clone RP23-163N19, complete sequence Length = 196060 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 ggaggagcgcggcggcggcggc 48 |||||||||||||||||||||| Sbjct: 109043 ggaggagcgcggcggcggcggc 109064
>gb|AC131772.4| Mus musculus BAC clone RP24-300K9 from chromosome 5, complete sequence Length = 161015 Score = 44.1 bits (22), Expect = 0.63 Identities = 25/26 (96%) Strand = Plus / Minus Query: 398 agcttttgatatgtttgccttactgt 423 ||||||||||| |||||||||||||| Sbjct: 138744 agcttttgataggtttgccttactgt 138719
>dbj|AP005072.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0708H12 Length = 162381 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 cggaggagcgcggcggcggcgg 47 |||||||||||||||||||||| Sbjct: 162295 cggaggagcgcggcggcggcgg 162274
>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_A01 Length = 139121 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 ggaggagcgcggcggcggcggc 48 |||||||||||||||||||||| Sbjct: 26537 ggaggagcgcggcggcggcggc 26516
>gb|AC009283.6| Homo sapiens chromosome 17, clone RP11-390P24, complete sequence Length = 175320 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 ggaggagcgcggcggcggcggc 48 |||||||||||||||||||||| Sbjct: 7668 ggaggagcgcggcggcggcggc 7689
>dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0428D12 Length = 141678 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 cggaggagcgcggcggcggcgg 47 |||||||||||||||||||||| Sbjct: 41931 cggaggagcgcggcggcggcgg 41952
>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516F12 Length = 146364 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 cggaggagcgcggcggcggcgg 47 |||||||||||||||||||||| Sbjct: 66318 cggaggagcgcggcggcggcgg 66297
>dbj|AK106971.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-G05, full insert sequence Length = 2276 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 ggaggagcgcggcggcggcggc 48 |||||||||||||||||||||| Sbjct: 134 ggaggagcgcggcggcggcggc 113
>dbj|AK100190.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035K01, full insert sequence Length = 1719 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 ggaggagcgcggcggcggcggc 48 |||||||||||||||||||||| Sbjct: 123 ggaggagcgcggcggcggcggc 102
>dbj|AK100098.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004D19, full insert sequence Length = 1737 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 ggaggagcgcggcggcggcggc 48 |||||||||||||||||||||| Sbjct: 140 ggaggagcgcggcggcggcggc 119
>dbj|AK067700.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118L17, full insert sequence Length = 2792 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 cggaggagcgcggcggcggcgg 47 |||||||||||||||||||||| Sbjct: 62 cggaggagcgcggcggcggcgg 41
>gb|AY104878.1| Zea mays PCO082540 mRNA sequence Length = 825 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 ggaggagcgcggcggcggcggc 48 |||||||||||||||||||||| Sbjct: 111 ggaggagcgcggcggcggcggc 90
>gb|AF016913.1|AF016913 Mus musculus casein kinase II alpha 2 (Csnk2a2) gene, promoter region Length = 1498 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 ggaggagcgcggcggcggcggc 48 |||||||||||||||||||||| Sbjct: 1486 ggaggagcgcggcggcggcggc 1465
>gb|AC005288.1|AC005288 Homo sapiens chromosome 17, clone hCIT.131_K_11, complete sequence Length = 137496 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 ggaggagcgcggcggcggcggc 48 |||||||||||||||||||||| Sbjct: 6871 ggaggagcgcggcggcggcggc 6850
>gb|AY885237.1| Homo sapiens sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A (SEMA7A) gene, complete cds Length = 27880 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 32 agcgcggcggcggcggcaaggg 53 |||||||||||||||||||||| Sbjct: 2666 agcgcggcggcggcggcaaggg 2645
>gb|AC165414.9| Mus musculus chromosome 8, clone RP23-424A21, complete sequence Length = 192707 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 ggaggagcgcggcggcggcggc 48 |||||||||||||||||||||| Sbjct: 183092 ggaggagcgcggcggcggcggc 183113
>gb|AC012435.13| Homo sapiens chromosome 15, clone RP11-10O17, complete sequence Length = 132994 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 32 agcgcggcggcggcggcaaggg 53 |||||||||||||||||||||| Sbjct: 26260 agcgcggcggcggcggcaaggg 26281
>gb|AC191599.4| Medicago truncatula chromosome 2 BAC clone mth2-181i5, complete sequence Length = 121604 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 533 taaaagaaatagaccattttc 553 ||||||||||||||||||||| Sbjct: 92271 taaaagaaatagaccattttc 92291
>ref|NM_001071055.1| Oryza sativa (japonica cultivar-group) Os10g0393800 (Os10g0393800) mRNA, complete cds Length = 1472 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 gaggagcgcggcggcggcggc 48 ||||||||||||||||||||| Sbjct: 111 gaggagcgcggcggcggcggc 91
>ref|NM_001063438.1| Oryza sativa (japonica cultivar-group) Os06g0164500 (Os06g0164500) mRNA, complete cds Length = 1113 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 gaggagcgcggcggcggcggc 48 ||||||||||||||||||||| Sbjct: 78 gaggagcgcggcggcggcggc 58
>ref|XM_001164740.1| PREDICTED: Pan troglodytes de-etiolated 1, transcript variant 2 (DET1), mRNA Length = 2571 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 516 tatgtcattctcatcagtaaa 536 ||||||||||||||||||||| Sbjct: 2254 tatgtcattctcatcagtaaa 2234
>ref|XM_001164815.1| PREDICTED: Pan troglodytes de-etiolated 1, transcript variant 4 (DET1), mRNA Length = 2584 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 516 tatgtcattctcatcagtaaa 536 ||||||||||||||||||||| Sbjct: 2267 tatgtcattctcatcagtaaa 2247
>ref|XM_001164781.1| PREDICTED: Pan troglodytes de-etiolated 1, transcript variant 3 (DET1), mRNA Length = 2541 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 516 tatgtcattctcatcagtaaa 536 ||||||||||||||||||||| Sbjct: 2224 tatgtcattctcatcagtaaa 2204
>ref|XM_001164700.1| PREDICTED: Pan troglodytes de-etiolated 1, transcript variant 1 (DET1), mRNA Length = 2452 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 516 tatgtcattctcatcagtaaa 536 ||||||||||||||||||||| Sbjct: 2135 tatgtcattctcatcagtaaa 2115
>ref|XM_517882.2| PREDICTED: Pan troglodytes hypothetical LOC462006 (LOC462006), mRNA Length = 2683 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 gaggagcgcggcggcggcggc 48 ||||||||||||||||||||| Sbjct: 68 gaggagcgcggcggcggcggc 48
>emb|AM260479.1| Ralstonia eutropha H16 chromosome 1 Length = 4052032 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 ttctcccgacattgaccgggg 571 ||||||||||||||||||||| Sbjct: 782113 ttctcccgacattgaccgggg 782093
>gb|AY730293.1| Hodgkinsonia ovatiflora internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 689 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 cggggcgaggggcagctggcc 587 ||||||||||||||||||||| Sbjct: 201 cggggcgaggggcagctggcc 181
>gb|DQ063698.1| Timonius densiflorus internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 631 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 cggggcgaggggcagctggcc 587 ||||||||||||||||||||| Sbjct: 198 cggggcgaggggcagctggcc 178
>gb|DQ063686.1| Antirhea rhamnoides internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 627 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 cggggcgaggggcagctggcc 587 ||||||||||||||||||||| Sbjct: 198 cggggcgaggggcagctggcc 178
>gb|DQ063683.1| Guettarda noumeana internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 629 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 cggggcgaggggcagctggcc 587 ||||||||||||||||||||| Sbjct: 199 cggggcgaggggcagctggcc 179
>gb|DQ063679.1| Guettarda humboldtensis internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 629 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 cggggcgaggggcagctggcc 587 ||||||||||||||||||||| Sbjct: 199 cggggcgaggggcagctggcc 179
>gb|DQ063667.1| Antirhea smithii internal transcribed spacer 1 and 5.8S ribosomal RNA gene, partial sequence Length = 266 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 cggggcgaggggcagctggcc 587 ||||||||||||||||||||| Sbjct: 198 cggggcgaggggcagctggcc 178
>gb|BC064591.1| Homo sapiens de-etiolated homolog 1 (Arabidopsis), mRNA (cDNA clone IMAGE:5747683) Length = 1954 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 516 tatgtcattctcatcagtaaa 536 ||||||||||||||||||||| Sbjct: 1852 tatgtcattctcatcagtaaa 1832
>gb|BC073867.1| Homo sapiens de-etiolated homolog 1 (Arabidopsis), mRNA (cDNA clone IMAGE:5499012) Length = 2275 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 516 tatgtcattctcatcagtaaa 536 ||||||||||||||||||||| Sbjct: 2025 tatgtcattctcatcagtaaa 2005
>gb|BC001242.2| Homo sapiens de-etiolated homolog 1 (Arabidopsis), mRNA (cDNA clone IMAGE:3451902), partial cds Length = 1573 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 516 tatgtcattctcatcagtaaa 536 ||||||||||||||||||||| Sbjct: 1483 tatgtcattctcatcagtaaa 1463
>gb|AC120534.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0084A20, complete sequence Length = 139391 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 acggaggagcgcggcggcggcggca 49 ||||||| ||||||||||||||||| Sbjct: 70359 acggaggcgcgcggcggcggcggca 70335
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 gcgcggcggcggcggcaaggg 53 ||||||||||||||||||||| Sbjct: 532495 gcgcggcggcggcggcaaggg 532475
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 aggagcgcggcggcggcggca 49 ||||||||||||||||||||| Sbjct: 47982 aggagcgcggcggcggcggca 48002
>ref|NM_017996.2| Homo sapiens de-etiolated homolog 1 (Arabidopsis) (DET1), mRNA dbj|AK054603.1| Homo sapiens cDNA FLJ30041 fis, clone 3NB692001528, weakly similar to LIGHT-MEDIATED DEVELOPMENT PROTEIN DET1 Length = 2315 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 516 tatgtcattctcatcagtaaa 536 ||||||||||||||||||||| Sbjct: 2242 tatgtcattctcatcagtaaa 2222
>dbj|AK000965.1| Homo sapiens cDNA FLJ10103 fis, clone HEMBA1002495, weakly similar to LIGHT-MEDIATED DEVELOPMENT PROTEIN DET1 Length = 1595 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 516 tatgtcattctcatcagtaaa 536 ||||||||||||||||||||| Sbjct: 1522 tatgtcattctcatcagtaaa 1502
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 109 atcggcggcgcggtcggcggagccgtcgg 137 |||||||||||||||||||| || ||||| Sbjct: 1153016 atcggcggcgcggtcggcggcgcggtcgg 1153044
>dbj|AB073887.1| Homo sapiens primary neuroblastoma cDNA, clone:Nbla02975, full insert sequence Length = 2273 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 516 tatgtcattctcatcagtaaa 536 ||||||||||||||||||||| Sbjct: 2194 tatgtcattctcatcagtaaa 2174
>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0068A07, from Chromosome 10, complete sequence Length = 154505 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 gaggagcgcggcggcggcggc 48 ||||||||||||||||||||| Sbjct: 136327 gaggagcgcggcggcggcggc 136307
>gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, complete sequence Length = 118183 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 aggagcgcggcggcggcggca 49 ||||||||||||||||||||| Sbjct: 107965 aggagcgcggcggcggcggca 107985
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16, complete sequence Length = 179157 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 ggaggagcgcggcggcggcgg 47 ||||||||||||||||||||| Sbjct: 14649 ggaggagcgcggcggcggcgg 14629
>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete sequence Length = 177565 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 gaggagcgcggcggcggcggc 48 ||||||||||||||||||||| Sbjct: 147322 gaggagcgcggcggcggcggc 147342
>emb|CR392026.10| Zebrafish DNA sequence from clone DKEY-153N9 in linkage group 2, complete sequence Length = 191490 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 ctgcttttattaggttttaaa 326 ||||||||||||||||||||| Sbjct: 79189 ctgcttttattaggttttaaa 79209
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 gaggagcgcggcggcggcggc 48 ||||||||||||||||||||| Sbjct: 3276932 gaggagcgcggcggcggcggc 3276912
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 gcggcggcggcggcaagggag 55 ||||||||||||||||||||| Sbjct: 112536 gcggcggcggcggcaagggag 112516
>emb|AL359823.15| Human DNA sequence from clone RP4-610L12 on chromosome 1p12-13.3 Contains part of the WARS2 gene for tryptophanyl tRNA synthetase 2 (mitochondrial), the 5' end of a novel gene, a CGI-79 protein (CGI-79) pseudogene and a ribosomal protein S3A (RPS3A) pseudogene, complete sequence Length = 74784 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 496 gttttgttgtattgaagtcat 516 ||||||||||||||||||||| Sbjct: 37703 gttttgttgtattgaagtcat 37683
>gb|AC093527.2| Homo sapiens chromosome 5 clone RP11-252A23, complete sequence Length = 191035 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 gaggagcgcggcggcggcggc 48 ||||||||||||||||||||| Sbjct: 44906 gaggagcgcggcggcggcggc 44926
>gb|AC016623.6| Homo sapiens chromosome 5 clone CTD-2345N17, complete sequence Length = 153823 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 ctagcttttgatatgtttgcc 416 ||||||||||||||||||||| Sbjct: 22647 ctagcttttgatatgtttgcc 22627
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ggcggcggcggcaagggagaa 57 ||||||||||||||||||||| Sbjct: 385857 ggcggcggcggcaagggagaa 385837
>gb|AC073536.5| Homo sapiens chromosome 5 clone CTD-2068E4, complete sequence Length = 116993 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 ctagcttttgatatgtttgcc 416 ||||||||||||||||||||| Sbjct: 19703 ctagcttttgatatgtttgcc 19683
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 104 tcgcaatcggcggcgcggtcggcggagcc 132 |||||||||||| ||| |||||||||||| Sbjct: 104059 tcgcaatcggcgccgccgtcggcggagcc 104031
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 gcgcggcggcggcggcaaggg 53 ||||||||||||||||||||| Sbjct: 341151 gcgcggcggcggcggcaaggg 341131
>gb|AC025761.5|AC025761 Homo sapiens chromosome 5 clone CTB-109C23, complete sequence Length = 112944 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 gaggagcgcggcggcggcggc 48 ||||||||||||||||||||| Sbjct: 48829 gaggagcgcggcggcggcggc 48809
>dbj|AP002536.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0015I14 Length = 150650 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 gaggagcgcggcggcggcggc 48 ||||||||||||||||||||| Sbjct: 64295 gaggagcgcggcggcggcggc 64275
>gb|AC109513.14| Homo sapiens chromosome 15, clone RP11-893E1, complete sequence Length = 93684 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 516 tatgtcattctcatcagtaaa 536 ||||||||||||||||||||| Sbjct: 53434 tatgtcattctcatcagtaaa 53454
>dbj|AK108245.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-H05, full insert sequence Length = 1472 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 gaggagcgcggcggcggcggc 48 ||||||||||||||||||||| Sbjct: 111 gaggagcgcggcggcggcggc 91
>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10, complete sequence Length = 156772 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 gcggcggcggcggcaagggag 55 ||||||||||||||||||||| Sbjct: 112536 gcggcggcggcggcaagggag 112516
>gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0098I11, complete sequence Length = 122970 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 gcggcggcggcggcaagggag 55 ||||||||||||||||||||| Sbjct: 121923 gcggcggcggcggcaagggag 121903
>gb|AC013489.17| Homo sapiens chromosome 15, clone RP11-97O12, complete sequence Length = 175836 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 516 tatgtcattctcatcagtaaa 536 ||||||||||||||||||||| Sbjct: 121106 tatgtcattctcatcagtaaa 121086
>ref|XM_001032112.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00691470) mRNA, complete cds Length = 7458 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 tttgtttgatctttaaggaa 365 |||||||||||||||||||| Sbjct: 3771 tttgtttgatctttaaggaa 3790
>gb|CP000478.1| Syntrophobacter fumaroxidans MPOB, complete genome Length = 4990251 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gagcgcggcggcggcggcaa 50 |||||||||||||||||||| Sbjct: 2603893 gagcgcggcggcggcggcaa 2603912
>emb|CT834530.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109C09, full insert sequence Length = 1044 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ggcggcggcggcaagggaga 56 |||||||||||||||||||| Sbjct: 39 ggcggcggcggcaagggaga 20
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gcgcatcggcgccggagtcg 106 |||||||||||||||||||| Sbjct: 3009649 gcgcatcggcgccggagtcg 3009630
>ref|NM_001071136.1| Oryza sativa (japonica cultivar-group) Os10g0415400 (Os10g0415400) mRNA, complete cds Length = 1050 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ggcggcggcggcaagggaga 56 |||||||||||||||||||| Sbjct: 46 ggcggcggcggcaagggaga 27
>ref|NM_001069717.1| Oryza sativa (japonica cultivar-group) Os09g0416900 (Os09g0416900) mRNA, complete cds Length = 1467 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 aggagcgcggcggcggcggc 48 |||||||||||||||||||| Sbjct: 1247 aggagcgcggcggcggcggc 1266
>ref|NM_001069688.1| Oryza sativa (japonica cultivar-group) Os09g0411700 (Os09g0411700) mRNA, complete cds Length = 850 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 cggcggcggcggcaagggag 55 |||||||||||||||||||| Sbjct: 135 cggcggcggcggcaagggag 154
>ref|NM_001049743.1| Oryza sativa (japonica cultivar-group) Os01g0520800 (Os01g0520800) mRNA, complete cds Length = 973 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 aacggaggagcgcggcggcggcgg 47 ||||| |||||||||||||||||| Sbjct: 174 aacggtggagcgcggcggcggcgg 151
>emb|AM167904.1| Bordetella avium 197N complete genome Length = 3732255 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gcggtcggcggagccgtcgg 137 |||||||||||||||||||| Sbjct: 1631841 gcggtcggcggagccgtcgg 1631822
>emb|AM236080.1| Rhizobium leguminosarum bv. viciae chromosome complete genome, strain 3841 Length = 5057142 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gagcgcggcggcggcggcaa 50 |||||||||||||||||||| Sbjct: 2093858 gagcgcggcggcggcggcaa 2093877
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ttgatacactgcgggaaaaa 281 |||||||||||||||||||| Sbjct: 784234 ttgatacactgcgggaaaaa 784253
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cggcgcggtcggcggagccg 133 |||||||||||||||||||| Sbjct: 3218139 cggcgcggtcggcggagccg 3218120
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gcgcatcggcgccggagtcg 106 |||||||||||||||||||| Sbjct: 2634144 gcgcatcggcgccggagtcg 2634163
>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome Length = 3225748 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 gtcggcggagccgtcggtgc 140 |||||||||||||||||||| Sbjct: 3077699 gtcggcggagccgtcggtgc 3077718
>ref|XM_001004471.1| PREDICTED: Mus musculus cleavage and polyadenylation specific factor 4, transcript variant 5 (Cpsf4), mRNA Length = 1734 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 gcggcggcggcggcaagggagaag 58 ||||||||||||||||| |||||| Sbjct: 31 gcggcggcggcggcaagcgagaag 54
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 agctgcttggcgcgcatcgg 95 |||||||||||||||||||| Sbjct: 66905 agctgcttggcgcgcatcgg 66886
>gb|DQ174261.1| Streptomyces tsusimaensis strain ATCC 15141 putative conserved protein gene, partial cds; putative conserved protein, TetR-family regulatory protein, N5,N10-methylenetetrahydromethanopterin reductase, penicillin-binding protein, putative conserved protein, 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, putative conserved proteins, necrosis inducing factor, conserved membrane-associated protein, transcriptional regulator, putative conserved protein, and discrete type II thioesterase genes, complete cds; valinomycin biosynthesis gene cluster, complete sequence; putative transposase gene, complete cds; and unknown gene Length = 39345 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 ggcgcggtcggcggagccgt 134 |||||||||||||||||||| Sbjct: 2214 ggcgcggtcggcggagccgt 2195
>gb|AC158553.13| Mus musculus chromosome 8, clone RP23-349E13, complete sequence Length = 213309 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 acggaggagcgcggcggcggcggc 48 ||||||| |||||||||||||||| Sbjct: 111426 acggaggggcgcggcggcggcggc 111449
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 93 cggcgccggagtcgcaatcggcggcgcg 120 |||||||||||||| |||||||||||| Sbjct: 2502601 cggcgccggagtcgttatcggcggcgcg 2502628
>gb|AY022915.1| Oryza sativa microsatellite MRG5240 containing (CGT)X10, genomic sequence Length = 230 Score = 40.1 bits (20), Expect = 9.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 21 gggaacggaggagcgcggcggcggcggc 48 ||||||||||||| |||||||||||||| Sbjct: 133 gggaacggaggag-gcggcggcggcggc 159
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 40.1 bits (20), Expect = 9.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 21 gggaacggaggagcgcggcggcggcggc 48 ||||||||||||| |||||||||||||| Sbjct: 77896 gggaacggaggag-gcggcggcggcggc 77870
>gb|AC105968.14| Mus musculus chromosome 18, clone RP23-265P4, complete sequence Length = 210819 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 471 gaaagcaggattcatgagagaaaa 494 |||||||||||||| ||||||||| Sbjct: 29708 gaaagcaggattcaagagagaaaa 29685
>gb|AY583236.1| Mycoplasma fermentans Bacteriophage phiMFV1, complete sequence Length = 18855 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 cctagcttttgatatgtttg 414 |||||||||||||||||||| Sbjct: 9023 cctagcttttgatatgtttg 9042
>gb|AY583235.1| Mycoplasma fermentans strain PG18 putative transport operon, partial sequence; bacteriophage phiMFV1a, complete sequence; thymidine kinase (tmk) gene, complete sequence and leucine aminopeptidase (lap) gene, partial sequence sequence Length = 23300 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 cctagcttttgatatgtttg 414 |||||||||||||||||||| Sbjct: 10626 cctagcttttgatatgtttg 10645
>gb|AY583234.1| Mycoplasma fermentans strain II-29/1 bacteriophage phiMFV1, complete sequence Length = 15757 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 cctagcttttgatatgtttg 414 |||||||||||||||||||| Sbjct: 6157 cctagcttttgatatgtttg 6176
>gb|AY597038.1|AY597038S1 Mus musculus RENT1 (Rent1) gene, exon 1 Length = 2670 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 acggaggagcgcggcggcggcggc 48 ||||||| |||||||||||||||| Sbjct: 1362 acggaggggcgcggcggcggcggc 1385
>gb|AC113599.10| Mus musculus chromosome 18, clone RP23-5D23, complete sequence Length = 217989 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 471 gaaagcaggattcatgagagaaaa 494 |||||||||||||| ||||||||| Sbjct: 9249 gaaagcaggattcaagagagaaaa 9272
>gb|AC127545.4| Mus musculus BAC clone RP24-562H22 from chromosome 19, complete sequence Length = 146015 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 ttctcatcagtaaaagaaat 542 |||||||||||||||||||| Sbjct: 122124 ttctcatcagtaaaagaaat 122143
>gb|AC124534.4| Mus musculus BAC clone RP23-316G7 from chromosome 1, complete sequence Length = 177675 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 ctgggttgctgaagatcaga 198 |||||||||||||||||||| Sbjct: 60553 ctgggttgctgaagatcaga 60572
>gb|AC102604.13| Mus musculus chromosome 19, clone RP23-385L22, complete sequence Length = 212387 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 ttctcatcagtaaaagaaat 542 |||||||||||||||||||| Sbjct: 187061 ttctcatcagtaaaagaaat 187042
>gb|BC056442.1| Mus musculus UPF1 regulator of nonsense transcripts homolog (yeast), mRNA (cDNA clone MGC:66863 IMAGE:5702493), complete cds Length = 4655 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 acggaggagcgcggcggcggcggc 48 ||||||| |||||||||||||||| Sbjct: 56 acggaggggcgcggcggcggcggc 79
>dbj|AK148196.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370046N24 product:regulator of nonsense transcripts 1, full insert sequence Length = 3732 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 acggaggagcgcggcggcggcggc 48 ||||||| |||||||||||||||| Sbjct: 54 acggaggggcgcggcggcggcggc 77
>gb|AC010057.7| Drosophila melanogaster 3L BAC RP98-26C18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 192588 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ttgatacactgcgggaaaaa 281 |||||||||||||||||||| Sbjct: 130687 ttgatacactgcgggaaaaa 130706
>dbj|AK046599.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430202H16 product:unclassifiable, full insert sequence Length = 2050 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 acggaggagcgcggcggcggcggc 48 ||||||| |||||||||||||||| Sbjct: 444 acggaggggcgcggcggcggcggc 421
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 40.1 bits (20), Expect = 9.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 21 gggaacggaggagcgcggcggcggcggc 48 ||||||||||||| |||||||||||||| Sbjct: 17668 gggaacggaggag-gcggcggcggcggc 17642
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cggcggcggcggcaagggag 55 |||||||||||||||||||| Sbjct: 14558445 cggcggcggcggcaagggag 14558426 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 aggagcgcggcggcggcggc 48 |||||||||||||||||||| Sbjct: 14885015 aggagcgcggcggcggcggc 14885034 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ggagcgcggcggcggcggca 49 |||||||||||||||||||| Sbjct: 15470228 ggagcgcggcggcggcggca 15470247
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 aacggaggagcgcggcggcggcgg 47 ||||| |||||||||||||||||| Sbjct: 18551985 aacggtggagcgcggcggcggcgg 18551962 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 30 ggagcgcggcggcggcggcaagggagaa 57 |||| |||||||||||||||| |||||| Sbjct: 38660257 ggagagcggcggcggcggcaaaggagaa 38660284
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggaggagcgcggcggcggcg 46 |||||||||||||||||||| Sbjct: 229125 ggaggagcgcggcggcggcg 229144
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 cggcgcggtcggcggagccgtcgg 137 ||||||||||||||| |||||||| Sbjct: 242980 cggcgcggtcggcggcgccgtcgg 242957
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1099D03 Length = 191022 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 30 ggagcgcggcggcggcggcaagggagaa 57 |||| |||||||||||||||| |||||| Sbjct: 118230 ggagagcggcggcggcggcaaaggagaa 118257
>ref|NM_030680.1| Mus musculus UPF1 regulator of nonsense transcripts homolog (yeast) (Upf1), mRNA gb|AF182947.1|AF182947 Mus musculus nonsense mRNA reducing factor 1 NORF1 mRNA, complete cds Length = 4630 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 acggaggagcgcggcggcggcggc 48 ||||||| |||||||||||||||| Sbjct: 68 acggaggggcgcggcggcggcggc 91
>dbj|AP003563.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1168H06 Length = 185600 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 aacggaggagcgcggcggcggcgg 47 ||||| |||||||||||||||||| Sbjct: 151202 aacggtggagcgcggcggcggcgg 151179
>gb|AF540993.1| Pseudomonas aeruginosa isolate 2-164 pyoverdin biosynthetic locus, partial sequence Length = 77740 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gcgcatcggcgccggagtcg 106 |||||||||||||||||||| Sbjct: 18622 gcgcatcggcgccggagtcg 18641
>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1299_A11 Length = 160099 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ggagcgcggcggcggcggca 49 |||||||||||||||||||| Sbjct: 119520 ggagcgcggcggcggcggca 119539
>dbj|AP004573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0678G09 Length = 139220 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 gaggagcgcggcggcggcgg 47 |||||||||||||||||||| Sbjct: 105308 gaggagcgcggcggcggcgg 105327
>dbj|AP005784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0014G10 Length = 164147 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 aggagcgcggcggcggcggc 48 |||||||||||||||||||| Sbjct: 93354 aggagcgcggcggcggcggc 93373
>dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1294_G06 Length = 115468 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cggcggcggcggcaagggag 55 |||||||||||||||||||| Sbjct: 56734 cggcggcggcggcaagggag 56715
>gb|AC090260.13| Homo sapiens chromosome 15, clone RP11-285A1, complete sequence Length = 207206 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 26 cggaggagcgcggcggcggcggcaaggg 53 |||||||| |||||||||||||| |||| Sbjct: 122458 cggaggagggcggcggcggcggcgaggg 122485
>dbj|AK121091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066F16, full insert sequence Length = 780 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 cggcggcggcggcaagggag 55 |||||||||||||||||||| Sbjct: 172 cggcggcggcggcaagggag 191
>dbj|AK104919.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-F11, full insert sequence Length = 713 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 cggcggcggcggcaagggag 55 |||||||||||||||||||| Sbjct: 105 cggcggcggcggcaagggag 124
>dbj|AK102454.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094A13, full insert sequence Length = 974 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 aacggaggagcgcggcggcggcgg 47 ||||| |||||||||||||||||| Sbjct: 175 aacggtggagcgcggcggcggcgg 152
>dbj|AK069676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026F22, full insert sequence Length = 1060 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ggcggcggcggcaagggaga 56 |||||||||||||||||||| Sbjct: 55 ggcggcggcggcaagggaga 36
>dbj|AK058290.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E07, full insert sequence Length = 850 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 cggcggcggcggcaagggag 55 |||||||||||||||||||| Sbjct: 135 cggcggcggcggcaagggag 154
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ggcggcggcggcaagggaga 56 |||||||||||||||||||| Sbjct: 22297 ggcggcggcggcaagggaga 22316
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 atcggcggcgcggtcggcgg 128 |||||||||||||||||||| Sbjct: 281851 atcggcggcgcggtcggcgg 281832
>gb|AC160969.3| Mus musculus BAC clone RP24-422L17 from chromosome 3, complete sequence Length = 204801 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 532 gtaaaagaaatagaccattttctc 555 ||||||||||||||| |||||||| Sbjct: 120129 gtaaaagaaatagacaattttctc 120152
>gb|L25842.1|CRUMCT1A Chinese hamster monocarboxylate transporter 1 mRNA, complete cds Length = 3291 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 gcggcggcggcggcaaggga 54 |||||||||||||||||||| Sbjct: 36 gcggcggcggcggcaaggga 55
>gb|M97382.1|CRUMEVTRSP Hamster mevalonate transporter mRNA, complete cds Length = 3345 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 gcggcggcggcggcaaggga 54 |||||||||||||||||||| Sbjct: 64 gcggcggcggcggcaaggga 83
>emb|AL845503.5| Mouse DNA sequence from clone RP23-292G16 on chromosome 2, complete sequence Length = 148491 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 ccattttctcccgacattga 565 |||||||||||||||||||| Sbjct: 49495 ccattttctcccgacattga 49476
>gb|AC091313.11| Mus musculus chromosome 3, clone RP23-173I1, complete sequence Length = 202531 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 532 gtaaaagaaatagaccattttctc 555 ||||||||||||||| |||||||| Sbjct: 79400 gtaaaagaaatagacaattttctc 79423
>gb|DQ157583.1| Hyaena hyaena from Tanzania cytochrome b gene, partial cds; mitochondrial Length = 340 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 362 ggaacattggagttctgctactatttac 389 ||||||||||| |||||||| ||||||| Sbjct: 301 ggaacattggaattctgctattatttac 328
>gb|DQ157582.1| Hyaena hyaena from Angola cytochrome b gene, partial cds; mitochondrial Length = 340 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 362 ggaacattggagttctgctactatttac 389 ||||||||||| |||||||| ||||||| Sbjct: 301 ggaacattggaattctgctattatttac 328
>gb|DQ157577.1| Hyaena hyaena from Syria cytochrome b gene, partial cds; mitochondrial Length = 340 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 362 ggaacattggagttctgctactatttac 389 ||||||||||| |||||||| ||||||| Sbjct: 301 ggaacattggaattctgctattatttac 328 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 123,243,864 Number of extensions: 7092437 Number of successful extensions: 292198 Number of sequences better than 10.0: 152 Number of HSP's gapped: 292197 Number of HSP's successfully gapped: 164 Length of query: 667 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 645 Effective length of database: 18,508,616,841 Effective search space: 11938057862445 Effective search space used: 11938057862445 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
