ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf95p09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os05g0126500:Os05g0126500 | 30 | 2.2 | 2 | Os09g0473900:Os09g0473900 | 30 | 2.2 | 3 | Os12g0509800:Os12g0509800 | 30 | 2.8 | 4 | Os06g0638500:Os06g0638500 | 30 | 3.7 | 5 | AK110024: | 30 | 3.7 | 6 | Os05g0376700:Os05g0376700 | 29 | 4.8 | 7 | AK119804: | 29 | 4.8 | 8 | Os10g0198900:Os10g0198900 | 29 | 6.3 | 9 | Os02g0599800:Os02g0599800 | 29 | 6.3 | 10 | AK071948:Os04g0311400 | 29 | 6.3 | 11 | AB071296:Os06g0702600 | 29 | 6.3 | 12 | AK103312:Os06g0702600 | 29 | 6.3 | 13 | Os10g0199500:Os10g0199500 | 28 | 8.2 | 14 | AK119828: | 28 | 8.2 | 15 | AK105007:Os01g0904200 | 28 | 8.2 | 16 | AK070604:Os08g0402800 | 28 | 8.2 | 17 | AK068432:Os01g0904200 | 28 | 8.2 | 18 | U25430:Os01g0196600 | 28 | 8.2 | 19 | AK101742:Os01g0196600 | 28 | 8.2 | 20 | AK110318: | 25 | 9.3 |
|---|
>Os05g0126500:Os05g0126500 | Length = 293 Score = 30.4 bits (67), Expect = 2.2 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Frame = -2 Query: 209 GCWRAAADARSRRETPAG*GARVSGVRTRAVA*GCT-DWADLRAAETVVSW 60 G AAA R+ R T A G V G R RA CT +D AAE +W Sbjct: 44 GAVAAAAGGRASRATSAAWGLAVGGGRRRACGHPCTGSPSDPAAAEASTAW 94
>Os09g0473900:Os09g0473900 | Length = 1685 Score = 30.4 bits (67), Expect = 2.2 Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 1/69 (1%) Frame = +1 Query: 4 SLTLASAPPFPKYSRASGLQLTTVSAARRSAQSVQPQATALVRTPL-TLAPYPAGVSLLD 180 S + PP P + TT S++ Q V P+A A + TP T P PA V Sbjct: 969 STPVPEPPPTPTPTHPRATTSTTTSSSSTPPQPVSPRAPAPIATPPGTSTPTPARVERSP 1028 Query: 181 RASAAALQH 207 A L H Sbjct: 1029 VEFATPLSH 1037
>Os12g0509800:Os12g0509800 | Length = 170 Score = 30.0 bits (66), Expect = 2.8 Identities = 26/105 (24%), Positives = 38/105 (36%), Gaps = 24/105 (22%) Frame = +3 Query: 69 HRFRRAQIRPIRAASGHRSGTDAAYPCSLPCWRLPPGSS-------------------VS 191 H RR ++R R + G A PC LP P GS + Sbjct: 18 HLRRRRRLRRGRTDAAPVVGVAADPPCPLPSSPSPSGSGGEGPAVAAAFFARLSPIRPLR 77 Query: 192 RRPPASLIWSDQI-----RCNLARRRPQSLVFARGSWRAGVWVAG 311 RRPPA+ + Q+ C P + ++ W A ++AG Sbjct: 78 RRPPATAVLCQQLLRPPPLCPSTPLFPPTQIYGAAPWSAAQFLAG 122
>Os06g0638500:Os06g0638500 | Length = 876 Score = 29.6 bits (65), Expect = 3.7 Identities = 19/62 (30%), Positives = 28/62 (45%) Frame = +2 Query: 701 SLRSTTMSRKRRGVRMESGTCRINVLKWLLLASKFLKGCYSFYCIAGLQLCGLFTNMFGG 880 SL+ +S R+ CR+ L L LA+ +L G +A L++ L N F G Sbjct: 195 SLQELNLSNNALAGRLPPALCRLPSLAVLGLANNYLAGELPIGGLAALEVVDLSANYFNG 254 Query: 881 FL 886 L Sbjct: 255 SL 256
>AK110024: | Length = 996 Score = 29.6 bits (65), Expect = 3.7 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -3 Query: 370 TTALNPNPRTTPSATILDQPPATQTPARHEPR 275 T+A N PR+ S T + + P T+TP+ PR Sbjct: 16 TSAPNREPRSPASPTTIQRHPFTRTPSNEPPR 47
>Os05g0376700:Os05g0376700 | Length = 1472 Score = 29.3 bits (64), Expect = 4.8 Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 1/69 (1%) Frame = +1 Query: 4 SLTLASAPPFPKYSRASGLQLTTVSAARRSAQSVQPQATALVRTPL-TLAPYPAGVSLLD 180 S + PP P + + TT S++ Q V P+A TP T P PA V Sbjct: 851 STPVLEPPPTPTPTHSRATTSTTTSSSSTPPQPVSPRALVPTATPPGTSTPTPARVERSP 910 Query: 181 RASAAALQH 207 A +L H Sbjct: 911 VEFATSLSH 919
>AK119804: | Length = 1080 Score = 29.3 bits (64), Expect = 4.8 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = +1 Query: 814 LLFFLLHCRLAAVWIVHKYVWWISCCY*PCLQAMI 918 L+FF L ++ A +V Y W+ C+ CLQ+++ Sbjct: 239 LIFFNLWVKIDAHRVVKDYAWYWGDCFFLCLQSLV 273
>Os10g0198900:Os10g0198900 | Length = 298 Score = 28.9 bits (63), Expect = 6.3 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +3 Query: 255 PQSLVFARGSWRAGVWVAGGW 317 P +L+F RG WR W A GW Sbjct: 61 PFALIFERGKWRDIDWSATGW 81
>Os02g0599800:Os02g0599800 | Length = 654 Score = 28.9 bits (63), Expect = 6.3 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 9/74 (12%) Frame = +3 Query: 12 PRLRSPISEVLASQRPPAHHRFRRAQIRPIRAA---------SGHRSGTDAAYPCSLPCW 164 PR R+ + L+SQR P R RR + R + AA RS AA +LP Sbjct: 553 PRRRAALPPPLSSQRRP---RLRRRRRRSVVAAVFVAQRCRHRRRRSNAAAAAVAALP-- 607 Query: 165 RLPPGSSVSRRPPA 206 P SS S+RP A Sbjct: 608 --PSSSSSSQRPVA 619
>AK071948:Os04g0311400 | Length = 384 Score = 28.9 bits (63), Expect = 6.3 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = -2 Query: 335 LRYHPRPTSGDPDTSPPRTTSKHQ*LRPTPRQITPNLVGP 216 +R P P + P P R +HQ LRP P ++ L P Sbjct: 99 VRRQPPPRAAAPAAGPHRDARRHQVLRPHPGRVPRPLPRP 138
>AB071296:Os06g0702600 | Length = 1123 Score = 28.9 bits (63), Expect = 6.3 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = +1 Query: 547 RWSMVFPAWDSDAAGSSRAAESVWDSPPV 633 +W + WD AAG R S+W+ PV Sbjct: 320 QWRNLQVGWDESAAGERRNRVSIWEIEPV 348
>AK103312:Os06g0702600 | Length = 991 Score = 28.9 bits (63), Expect = 6.3 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = +1 Query: 547 RWSMVFPAWDSDAAGSSRAAESVWDSPPV 633 +W + WD AAG R S+W+ PV Sbjct: 358 QWRNLQVGWDESAAGERRNRVSIWEIEPV 386
>Os10g0199500:Os10g0199500 | Length = 330 Score = 28.5 bits (62), Expect = 8.2 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +3 Query: 255 PQSLVFARGSWRAGVWVAGGW 317 P +L+F RG WR W A GW Sbjct: 62 PFALIFERGKWRDMDWRAFGW 82
>AK119828: | Length = 699 Score = 28.5 bits (62), Expect = 8.2 Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 17/60 (28%) Frame = +3 Query: 93 RPIRAAS-GHRSGTDAAYPCSLPC----------------WRLPPGSSVSRRPPASLIWS 221 RP+R AS R+ T + P + PC W L P + + PP +L W+ Sbjct: 634 RPLRRASPAARASTSPSPPSAWPCSRSAATSRTCASVSAAWSLAPAAPATPSPPTTLAWA 693
>AK105007:Os01g0904200 | Length = 238 Score = 28.5 bits (62), Expect = 8.2 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = -3 Query: 895 SSNKKSTKHICEQSTQLQACNAIERIAAFEELTRQKQP 782 S+ K+ K IC + ++ A+ERI F +T +K+P Sbjct: 150 SATKEMEKQICYEFDFVREAKAMERIREFLRVTNKKKP 187
>AK070604:Os08g0402800 | Length = 347 Score = 28.5 bits (62), Expect = 8.2 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +3 Query: 255 PQSLVFARGSWRAGVWVAGGW 317 P +L+F RG WR W A GW Sbjct: 73 PFALIFERGKWRDMDWGAFGW 93
>AK068432:Os01g0904200 | Length = 487 Score = 28.5 bits (62), Expect = 8.2 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = -3 Query: 895 SSNKKSTKHICEQSTQLQACNAIERIAAFEELTRQKQP 782 S+ K+ K IC + ++ A+ERI F +T +K+P Sbjct: 199 SATKEMEKQICYEFDFVREAKAMERIREFLRVTNKKKP 236
>U25430:Os01g0196600 | Length = 479 Score = 28.5 bits (62), Expect = 8.2 Identities = 21/54 (38%), Positives = 26/54 (48%) Frame = +1 Query: 10 TLASAPPFPKYSRASGLQLTTVSAARRSAQSVQPQATALVRTPLTLAPYPAGVS 171 T A A P P+ S AS ++AA A S L RTPL+ AP PA + Sbjct: 30 TTAGAAPAPRRSSASSRLHLLLTAALAVATSYL--LLILPRTPLSAAPAPAAAA 81
>AK101742:Os01g0196600 | Length = 479 Score = 28.5 bits (62), Expect = 8.2 Identities = 21/54 (38%), Positives = 26/54 (48%) Frame = +1 Query: 10 TLASAPPFPKYSRASGLQLTTVSAARRSAQSVQPQATALVRTPLTLAPYPAGVS 171 T A A P P+ S AS ++AA A S L RTPL+ AP PA + Sbjct: 30 TTAGAAPAPRRSSASSRLHLLLTAALAVATSYL--LLILPRTPLSAAPAPAAAA 81
>AK110318: | Length = 940 Score = 25.0 bits (53), Expect(2) = 9.3 Identities = 8/21 (38%), Positives = 15/21 (71%) Frame = -3 Query: 370 TTALNPNPRTTPSATILDQPP 308 T +P+P+ TP+ T +++PP Sbjct: 290 TPKASPSPKPTPTPTPIEEPP 310 Score = 21.6 bits (44), Expect(2) = 9.3 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = -2 Query: 323 PRPTSGDPDTSPPRTTSKHQ*LRPTPR 243 P+PT + P ++SK PTP+ Sbjct: 347 PKPTKPTSSSKKPSSSSKKVTPTPTPK 373 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 29,789,220 Number of extensions: 713367 Number of successful extensions: 3074 Number of sequences better than 10.0: 20 Number of HSP's gapped: 3067 Number of HSP's successfully gapped: 21 Length of query: 349 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 247 Effective length of database: 11,315,673 Effective search space: 2794971231 Effective search space used: 2794971231 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
