ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf95p09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P80012:VWF_BOVIN von Willebrand factor precursor - Bos taurus (B... 32 3.3
2Q86VQ1:GLCI1_HUMAN Glucocorticoid-induced transcript 1 protein -... 31 7.4
3Q02817:MUC2_HUMAN Mucin-2 precursor - Homo sapiens (Human) 27 8.5
4Q3UHJ0:AAK1_MOUSE AP2-associated protein kinase 1 - Mus musculus... 31 9.6

>P80012:VWF_BOVIN von Willebrand factor precursor - Bos taurus (Bovine)|
          Length = 937
 Score = 32.3 bits (72), Expect = 3.3
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = -1

Query: 993 LSLPHSLIFQ--GGFAKPYCMKMTSSDNHCLQTGLVATRNPPNIFVNNPHSCKPAMQ 829
           LS PH  ++Q  G      C  ++  D  C +  L     PP +F++   SC P  Q
Sbjct: 649 LSCPHGQVYQQCGTPCNLTCRSLSHPDEECTEVCLEGCFCPPGLFLDETGSCVPKAQ 705



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>Q86VQ1:GLCI1_HUMAN Glucocorticoid-induced transcript 1 protein - Homo sapiens (Human)|
          Length = 547

 Score = 31.2 bits (69), Expect = 7.4
 Identities = 29/93 (31%), Positives = 36/93 (38%)
 Frame = +3

Query: 24  SPISEVLASQRPPAHHRFRRAQIRPIRAASGHRSGTDAAYPCSLPCWRLPPGSSVSRRPP 203
           SP S    +   PA     RA+ RP R+   HR  +           R  PGS V R   
Sbjct: 105 SPSSPTPPAAAAPAEQA-PRAKGRPRRSPESHRRSSSPE--------RRSPGSPVCRADK 155

Query: 204 ASLIWSDQIRCNLARRRPQSLVFARGSWRAGVW 302
           A    S Q+R +   RR  SL    G +  G W
Sbjct: 156 AK---SQQVRTSSTIRRTSSLDTITGPYLTGQW 185



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>Q02817:MUC2_HUMAN Mucin-2 precursor - Homo sapiens (Human)|
          Length = 5179

 Score = 26.6 bits (57), Expect(2) = 8.5
 Identities = 14/36 (38%), Positives = 15/36 (41%)
 Frame = -2

Query: 323  PRPTSGDPDTSPPRTTSKHQ*LRPTPRQITPNLVGP 216
            P P +    T PP TTS      P P  ITP    P
Sbjct: 1737 PSPPTTTMTTLPPTTTSSPLTTTPLPPSITPPTFSP 1772



 Score = 22.7 bits (47), Expect(2) = 8.5
 Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
 Frame = -3

Query: 370  TTALNPNPRT--TPSATILDQPPAT 302
            TT  +P P T  TPS T    PP T
Sbjct: 1718 TTTPSPPPTTMTTPSPTTTPSPPTT 1742



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>Q3UHJ0:AAK1_MOUSE AP2-associated protein kinase 1 - Mus musculus (Mouse)|
          Length = 959

 Score = 30.8 bits (68), Expect = 9.6
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
 Frame = -3

Query: 349 PRTTPSATILDQPPATQTPARHEPRANTND----CGRRLAKLHRIWSDQIRDAGGRRLTL 182
           P T P A    +P   Q P R +P+  T       G+++  L    S + + AG RR+  
Sbjct: 576 PATAPQAAAAQEPGQIQAPVRQQPKVQTTPPPTIQGQKVGSLTPPSSPKTQRAGHRRILS 635

Query: 181 D 179
           D
Sbjct: 636 D 636


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 166,693,136
Number of extensions: 3503240
Number of successful extensions: 10772
Number of sequences better than 10.0: 4
Number of HSP's gapped: 10743
Number of HSP's successfully gapped: 5
Length of query: 349
Length of database: 100,686,439
Length adjustment: 114
Effective length of query: 235
Effective length of database: 69,416,809
Effective search space: 16312950115
Effective search space used: 16312950115
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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