ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf95p09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC122144.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0011L09, complete sequence Length = 121055 Score = 60.0 bits (30), Expect = 2e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 447 ggacgaggaagcgcgggaggagctggagcttgcactgtctctggggcgccggggttggca 506 ||||| ||| || ||||||||||||||||| || ||||| |||||||| || || ||||| Sbjct: 84615 ggacggggaggcacgggaggagctggagctcgcgctgtcgctggggcggcgagggtggca 84556 Query: 507 tctgccgccagcgc 520 | ||||| |||||| Sbjct: 84555 tttgccggcagcgc 84542 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Minus Query: 375 gacgatggcggacggggggaagatgaagggcgtggaggg 413 ||||||||||||| |||||| ||||||||| |||||||| Sbjct: 84696 gacgatggcggaccgggggaggatgaagggggtggaggg 84658
>gb|AC108884.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0058B20 from chromosome 10, complete sequence Length = 156232 Score = 60.0 bits (30), Expect = 2e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 447 ggacgaggaagcgcgggaggagctggagcttgcactgtctctggggcgccggggttggca 506 ||||| ||| || ||||||||||||||||| || ||||| |||||||| || || ||||| Sbjct: 132673 ggacggggaggcacgggaggagctggagctcgcgctgtcgctggggcggcgagggtggca 132732 Query: 507 tctgccgccagcgc 520 | ||||| |||||| Sbjct: 132733 tttgccggcagcgc 132746 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 375 gacgatggcggacggggggaagatgaagggcgtggaggg 413 ||||||||||||| |||||| ||||||||| |||||||| Sbjct: 132592 gacgatggcggaccgggggaggatgaagggggtggaggg 132630
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 60.0 bits (30), Expect = 2e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 447 ggacgaggaagcgcgggaggagctggagcttgcactgtctctggggcgccggggttggca 506 ||||| ||| || ||||||||||||||||| || ||||| |||||||| || || ||||| Sbjct: 12788176 ggacggggaggcacgggaggagctggagctcgcgctgtcgctggggcggcgagggtggca 12788117 Query: 507 tctgccgccagcgc 520 | ||||| |||||| Sbjct: 12788116 tttgccggcagcgc 12788103 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Minus Query: 375 gacgatggcggacggggggaagatgaagggcgtggaggg 413 ||||||||||||| |||||| ||||||||| |||||||| Sbjct: 12788257 gacgatggcggaccgggggaggatgaagggggtggaggg 12788219 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 727 gaagaggaggggagtgaggatg 748 |||||||||||||||||||||| Sbjct: 17206590 gaagaggaggggagtgaggatg 17206569 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 730 gaggaggggagtgaggatgga 750 ||||||||||||||||||||| Sbjct: 13920413 gaggaggggagtgaggatgga 13920393
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Plus Query: 518 cgccggcaccgccgccggcacccg 541 |||||||||||||||||||||||| Sbjct: 340546 cgccggcaccgccgccggcacccg 340569 Score = 46.1 bits (23), Expect = 0.25 Identities = 29/31 (93%) Strand = Plus / Plus Query: 509 tgccgccagcgccggcaccgccgccggcacc 539 |||||||||||||| || ||||||||||||| Sbjct: 2957199 tgccgccagcgccgccagcgccgccggcacc 2957229 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 508 ctgccgccagcgccggcaccgccgc 532 |||||||||||||||||| |||||| Sbjct: 1121160 ctgccgccagcgccggcagcgccgc 1121184
>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13 Length = 341957 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Plus Query: 518 cgccggcaccgccgccggcacccg 541 |||||||||||||||||||||||| Sbjct: 340484 cgccggcaccgccgccggcacccg 340507
>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14 Length = 343050 Score = 48.1 bits (24), Expect = 0.064 Identities = 24/24 (100%) Strand = Plus / Plus Query: 518 cgccggcaccgccgccggcacccg 541 |||||||||||||||||||||||| Sbjct: 341486 cgccggcaccgccgccggcacccg 341509
>ref|NM_001060657.1| Oryza sativa (japonica cultivar-group) Os04g0657300 (Os04g0657300) mRNA, complete cds Length = 1224 Score = 46.1 bits (23), Expect = 0.25 Identities = 29/31 (93%) Strand = Plus / Minus Query: 510 gccgccagcgccggcaccgccgccggcaccc 540 ||||||||||||| ||||||||||| ||||| Sbjct: 74 gccgccagcgccgccaccgccgccgacaccc 44
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 46.1 bits (23), Expect = 0.25 Identities = 29/31 (93%) Strand = Plus / Plus Query: 509 tgccgccagcgccggcaccgccgccggcacc 539 |||||||||||||| || ||||||||||||| Sbjct: 111017 tgccgccagcgccgccagcgccgccggcacc 111047
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 46.1 bits (23), Expect = 0.25 Identities = 29/31 (93%) Strand = Plus / Plus Query: 510 gccgccagcgccggcaccgccgccggcaccc 540 ||||||||||||| ||||||||||| ||||| Sbjct: 33562048 gccgccagcgccgccaccgccgccgacaccc 33562078
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 46.1 bits (23), Expect = 0.25 Identities = 29/31 (93%) Strand = Plus / Plus Query: 509 tgccgccagcgccggcaccgccgccggcacc 539 |||||||||||||| || ||||||||||||| Sbjct: 188019 tgccgccagcgccgccagcgccgccggcacc 188049
>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13, complete sequence Length = 152264 Score = 46.1 bits (23), Expect = 0.25 Identities = 29/31 (93%) Strand = Plus / Plus Query: 510 gccgccagcgccggcaccgccgccggcaccc 540 ||||||||||||| ||||||||||| ||||| Sbjct: 138337 gccgccagcgccgccaccgccgccgacaccc 138367
>gb|AD000019.1|MSGY223 Mycobacterium tuberculosis sequence from clone y223 Length = 42061 Score = 46.1 bits (23), Expect = 0.25 Identities = 29/31 (93%) Strand = Plus / Minus Query: 509 tgccgccagcgccggcaccgccgccggcacc 539 |||||||||||||| || ||||||||||||| Sbjct: 21617 tgccgccagcgccgccagcgccgccggcacc 21587
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 510 gccgccagcgccggcaccgccg 531 |||||||||||||||||||||| Sbjct: 4056046 gccgccagcgccggcaccgccg 4056067
>ref|NM_001074884.1| Oryza sativa (japonica cultivar-group) Os11g0641300 (Os11g0641300) mRNA, complete cds Length = 711 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 509 tgccgccagcgccggcaccgccgccg 534 ||||||| |||||||||||||||||| Sbjct: 697 tgccgccggcgccggcaccgccgccg 672
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 44.1 bits (22), Expect = 1.0 Identities = 28/30 (93%) Strand = Plus / Minus Query: 508 ctgccgccagcgccggcaccgccgccggca 537 ||||||||||||||| | |||||||||||| Sbjct: 9434916 ctgccgccagcgccgccgccgccgccggca 9434887
>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0041L19, complete sequence Length = 155086 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 509 tgccgccagcgccggcaccgccgccg 534 ||||||| |||||||||||||||||| Sbjct: 21852 tgccgccggcgccggcaccgccgccg 21827
>ref|NM_140056.2| Drosophila melanogaster CG3891-RA (CG3891), mRNA Length = 2041 Score = 44.1 bits (22), Expect = 1.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 508 ctgccgccagcgccggcaccgccgccggca 537 ||||||||||||||| | |||||||||||| Sbjct: 281 ctgccgccagcgccgccgccgccgccggca 310
>gb|AC010028.8| Drosophila melanogaster 3L BAC RP98-1E20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187489 Score = 44.1 bits (22), Expect = 1.0 Identities = 28/30 (93%) Strand = Plus / Minus Query: 508 ctgccgccagcgccggcaccgccgccggca 537 ||||||||||||||| | |||||||||||| Sbjct: 140940 ctgccgccagcgccgccgccgccgccggca 140911
>dbj|AK163911.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230045C18 product:Cortactin-binding protein 2 homolog (Fragment) homolog [Mus musculus], full insert sequence Length = 4094 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 864 caaatatgtttggtggatttct 885 |||||||||||||||||||||| Sbjct: 2962 caaatatgtttggtggatttct 2941
>gb|AY118913.1| Drosophila melanogaster LD21748 full insert cDNA Length = 2043 Score = 44.1 bits (22), Expect = 1.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 508 ctgccgccagcgccggcaccgccgccggca 537 ||||||||||||||| | |||||||||||| Sbjct: 256 ctgccgccagcgccgccgccgccgccggca 285
>gb|AE011656.1| Xanthomonas axonopodis pv. citri str. 306, section 34 of 469 of the complete genome Length = 10029 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 514 ccagcgccggcaccgccgccggcacc 539 ||||||||| |||||||||||||||| Sbjct: 7424 ccagcgccgccaccgccgccggcacc 7399
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 509 tgccgccagcgccggcaccgccgccg 534 ||||||| |||||||||||||||||| Sbjct: 24544950 tgccgccggcgccggcaccgccgccg 24544925 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 990 ataatttaatatttgtacttt 1010 ||||||||||||||||||||| Sbjct: 18293019 ataatttaatatttgtacttt 18293039
>gb|AC078893.10| Oryza sativa chromosome 10 BAC OSJNBb0044B19 genomic sequence, complete sequence Length = 81784 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 727 gaagaggaggggagtgaggatg 748 |||||||||||||||||||||| Sbjct: 41010 gaagaggaggggagtgaggatg 41031
>gb|AC027654.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-219K14, complete sequence Length = 223678 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 864 caaatatgtttggtggatttct 885 |||||||||||||||||||||| Sbjct: 82356 caaatatgtttggtggatttct 82377
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 509 tgccgccagcgccggcaccgccgccg 534 ||||||||||||| |||||||||||| Sbjct: 7058854 tgccgccagcgcctgcaccgccgccg 7058879
>gb|AC158663.2| Mus musculus BAC RP23-16J8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216101 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 864 caaatatgtttggtggatttct 885 |||||||||||||||||||||| Sbjct: 198457 caaatatgtttggtggatttct 198478
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 540 cgccttgagatggtcgatggtcttc 564 ||||||||| ||||||||||||||| Sbjct: 2952875 cgccttgagctggtcgatggtcttc 2952899
>ref|NM_001065538.1| Oryza sativa (japonica cultivar-group) Os07g0173200 (Os07g0173200) mRNA, complete cds Length = 1936 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 513 gccagcgccggcaccgccgcc 533 ||||||||||||||||||||| Sbjct: 637 gccagcgccggcaccgccgcc 617
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 cgccttgagatggtcgatggtcttc 564 ||||||||| ||||||||||||||| Sbjct: 2690918 cgccttgagctggtcgatggtcttc 2690894
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 cgccttgagatggtcgatggtcttc 564 ||||||||| ||||||||||||||| Sbjct: 3500703 cgccttgagctggtcgatggtcttc 3500679
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 677 acgctgatgcaggaggcgctg 697 ||||||||||||||||||||| Sbjct: 3061890 acgctgatgcaggaggcgctg 3061870
>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC nbxb0045B21, complete sequence Length = 152397 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 730 gaggaggggagtgaggatgga 750 ||||||||||||||||||||| Sbjct: 89039 gaggaggggagtgaggatgga 89019
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10, complete sequence Length = 158833 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 990 ataatttaatatttgtacttt 1010 ||||||||||||||||||||| Sbjct: 28384 ataatttaatatttgtacttt 28404
>gb|AC112330.5| Rattus norvegicus 15 BAC CH230-185E8 (Children's Hospital Oakland Research Institute) complete sequence Length = 158526 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 988 agataatttaatatttgtacttttc 1012 ||||||||||| ||||||||||||| Sbjct: 112850 agataatttaacatttgtacttttc 112874
>gb|AY658968.1| Synthetic construct Peudomonas aeruginosa clone FLH042578.01F PA2407 gene, partial cds Length = 954 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 cgccttgagatggtcgatggtcttc 564 ||||||||| ||||||||||||||| Sbjct: 759 cgccttgagctggtcgatggtcttc 735
>gb|AC110871.6| Homo sapiens 3 BAC RP11-639B4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 97110 Score = 42.1 bits (21), Expect = 4.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 982 tggtagagataatttaatatttgtacttt 1010 ||||| |||||||||||| |||||||||| Sbjct: 67471 tggtaaagataatttaatctttgtacttt 67443
>gb|AC011090.9| Homo sapiens chromosome 17, clone CTD-2005K23, complete sequence Length = 94042 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 974 agggagtgtggtagagataatttaa 998 |||||||||||| |||||||||||| Sbjct: 1183 agggagtgtggtggagataatttaa 1159
>emb|CR388406.7| Zebrafish DNA sequence from clone CH211-288H2 in linkage group 1, complete sequence Length = 161800 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 916 attgtcacttgatgtcatttt 936 ||||||||||||||||||||| Sbjct: 23075 attgtcacttgatgtcatttt 23055
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 513 gccagcgccggcaccgccgcc 533 ||||||||||||||||||||| Sbjct: 3881803 gccagcgccggcaccgccgcc 3881823
>emb|AL008726.3|HS337O18 Human DNA sequence from clone RP3-337O18 on chromosome 20q12-13.1 Contains the PLPT gene for phospholipid transfer protein, the PPGB gene for protective protein for beta-galactosidase (galactosialidosis), the PTE1 gene for peroxisomal acyl-CoA thioesterase, the C20orf161 gene, the C20orf162 gene, the C20orf163, the C20orf164 gene, the C20orf165 gene, the 5' end of an variant of the TNNC2 gene for fast troponin C2 and three CpG islands, complete sequence Length = 86080 Score = 42.1 bits (21), Expect = 4.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 727 gaagaggaggggagtgag-gatggagagc 754 |||||||||||||||||| |||||||||| Sbjct: 8436 gaagaggaggggagtgagagatggagagc 8408
>gb|AF406785.1|AF406785 Nosema locustae checkpoint protein kinase (chk1), pyruvate dehydrogenase E1 alpha subunit (pdhA), pyruvate dehydrogenase E1 beta subunit (pdhB), and calmodulin-dependent protein kinase (cmpk) genes, complete cds; and unknown genes Length = 7079 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 745 gatggagagcgggacctgcag 765 ||||||||||||||||||||| Sbjct: 6357 gatggagagcgggacctgcag 6377
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 508 ctgccgccagcgccggcaccgccgc 532 |||||||||||||||||| |||||| Sbjct: 87335 ctgccgccagcgccggcagcgccgc 87359
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 508 ctgccgccagcgccggcaccgccgc 532 |||||||||||||||||| |||||| Sbjct: 134573 ctgccgccagcgccggcagcgccgc 134597
>gb|AC157532.2| Pan troglodytes BAC clone CH251-305A6 from chromosome unknown, complete sequence Length = 204179 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 724 gaggaagaggaggggagtgag 744 ||||||||||||||||||||| Sbjct: 53207 gaggaagaggaggggagtgag 53227
>dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496D04 Length = 197358 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 513 gccagcgccggcaccgccgcc 533 ||||||||||||||||||||| Sbjct: 120915 gccagcgccggcaccgccgcc 120935
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 cagcgccggcaccgccgccgg 535 ||||||||||||||||||||| Sbjct: 6812296 cagcgccggcaccgccgccgg 6812276
>gb|AF540993.1| Pseudomonas aeruginosa isolate 2-164 pyoverdin biosynthetic locus, partial sequence Length = 77740 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 cgccttgagatggtcgatggtcttc 564 ||||||||| ||||||||||||||| Sbjct: 74318 cgccttgagctggtcgatggtcttc 74294
>dbj|AK098899.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B06, full insert sequence Length = 2083 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 513 gccagcgccggcaccgccgcc 533 ||||||||||||||||||||| Sbjct: 675 gccagcgccggcaccgccgcc 655
>dbj|AK098856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J22, full insert sequence Length = 2040 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 513 gccagcgccggcaccgccgcc 533 ||||||||||||||||||||| Sbjct: 674 gccagcgccggcaccgccgcc 654
>dbj|AK065275.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L11, full insert sequence Length = 2082 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 513 gccagcgccggcaccgccgcc 533 ||||||||||||||||||||| Sbjct: 674 gccagcgccggcaccgccgcc 654
>dbj|AK061624.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C04, full insert sequence Length = 1939 Score = 42.1 bits (21), Expect = 4.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 513 gccagcgccggcaccgccgcc 533 ||||||||||||||||||||| Sbjct: 636 gccagcgccggcaccgccgcc 616
>gb|AC005771.1|AC005771 Homo sapiens chromosome 17, clone hRPK.1058_G_23, complete sequence Length = 190434 Score = 42.1 bits (21), Expect = 4.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 974 agggagtgtggtagagataatttaa 998 |||||||||||| |||||||||||| Sbjct: 9540 agggagtgtggtggagataatttaa 9564 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 164,358,976 Number of extensions: 9355660 Number of successful extensions: 201931 Number of sequences better than 10.0: 52 Number of HSP's gapped: 201931 Number of HSP's successfully gapped: 60 Length of query: 1047 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1024 Effective length of database: 18,503,978,556 Effective search space: 18948074041344 Effective search space used: 18948074041344 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
