ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf95o15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001056155.1| Oryza sativa (japonica cultivar-group) Os03g0261100 (Os03g0261100) mRNA, complete cds Length = 894 Score = 250 bits (126), Expect = 9e-63 Identities = 250/290 (86%), Gaps = 6/290 (2%) Strand = Plus / Plus Query: 561 tgctgaggtacggcaaatactgcggaatcctctacagcggctgccccggcgagaagccct 620 |||||||||||||||| |||||||| |||||||||||||| ||||||||||||| ||| | Sbjct: 269 tgctgaggtacggcaagtactgcgggatcctctacagcgggtgccccggcgagaggccat 328 Query: 621 gcgacgccctcgacgcctgctgcatggtccacgaccactgcgttgccgccaacaacaatg 680 ||||||| |||||||||||||||||||| |||||||||||||| | | || ||||| | | Sbjct: 329 gcgacgcgctcgacgcctgctgcatggtgcacgaccactgcgtcgacacccacaacgacg 388 Query: 681 actacctgaacaccaggtgcaacgagaacctgctgggctgcctggacggggtgaagccgg 740 ||||||||||||| | ||||||||||||||||||| ||||| | ||| |||||| | Sbjct: 389 actacctgaacacgatgtgcaacgagaacctgctgagctgcatcgaccgggtga-----g 443 Query: 741 cggggccgacgttcccggggaataagtgcggcgtcgccgagacggcgttggtcataaagg 800 ||||| |||||||||||||||| |||||| ||||| | ||||||||| ||||| | || Sbjct: 444 cgggg-cgacgttcccggggaacaagtgcaacgtcggccagacggcgtccgtcatcaggg 502 Query: 801 gcgtcatcgagacggccgtgctcgcagggaagattcttcacaagcgcgac 850 | |||||||||||||||||| |||| || ||||| || |||||||||||| Sbjct: 503 gggtcatcgagacggccgtgttcgccggcaagatcctccacaagcgcgac 552 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 139 tgctgcttctcctctcgctggtggcggcttcgtgggggcttgaggtcggcgacct 193 ||||||||||||||| ||||||| |||| ||| |||||||| | |||||||||| Sbjct: 140 tgctgcttctcctcttgctggtgacggcgtcgcgggggcttaacatcggcgacct 194
>emb|AJ238117.1|OSA238117 Oryza sativa mRNA for putative phospholipase A2, isoform II Length = 877 Score = 250 bits (126), Expect = 9e-63 Identities = 250/290 (86%), Gaps = 6/290 (2%) Strand = Plus / Plus Query: 561 tgctgaggtacggcaaatactgcggaatcctctacagcggctgccccggcgagaagccct 620 |||||||||||||||| |||||||| |||||||||||||| ||||||||||||| ||| | Sbjct: 256 tgctgaggtacggcaagtactgcgggatcctctacagcgggtgccccggcgagaggccat 315 Query: 621 gcgacgccctcgacgcctgctgcatggtccacgaccactgcgttgccgccaacaacaatg 680 ||||||| |||||||||||||||||||| |||||||||||||| | | || ||||| | | Sbjct: 316 gcgacgcgctcgacgcctgctgcatggtgcacgaccactgcgtcgacacccacaacgacg 375 Query: 681 actacctgaacaccaggtgcaacgagaacctgctgggctgcctggacggggtgaagccgg 740 ||||||||||||| | ||||||||||||||||||| ||||| | ||| |||||| | Sbjct: 376 actacctgaacacgatgtgcaacgagaacctgctgagctgcatcgaccgggtga-----g 430 Query: 741 cggggccgacgttcccggggaataagtgcggcgtcgccgagacggcgttggtcataaagg 800 ||||| |||||||||||||||| |||||| ||||| | ||||||||| ||||| | || Sbjct: 431 cgggg-cgacgttcccggggaacaagtgcaacgtcggccagacggcgtccgtcatcaggg 489 Query: 801 gcgtcatcgagacggccgtgctcgcagggaagattcttcacaagcgcgac 850 | |||||||||||||||||| |||| || ||||| || |||||||||||| Sbjct: 490 gggtcatcgagacggccgtgttcgccggcaagatcctccacaagcgcgac 539 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 139 tgctgcttctcctctcgctggtggcggcttcgtgggggcttgaggtcggcgacct 193 ||||||||||||||| ||||||| |||| ||| |||||||| | |||||||||| Sbjct: 127 tgctgcttctcctcttgctggtgacggcgtcgcgggggcttaacatcggcgacct 181
>dbj|AK071135.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023076N15, full insert sequence Length = 895 Score = 250 bits (126), Expect = 9e-63 Identities = 250/290 (86%), Gaps = 6/290 (2%) Strand = Plus / Plus Query: 561 tgctgaggtacggcaaatactgcggaatcctctacagcggctgccccggcgagaagccct 620 |||||||||||||||| |||||||| |||||||||||||| ||||||||||||| ||| | Sbjct: 270 tgctgaggtacggcaagtactgcgggatcctctacagcgggtgccccggcgagaggccat 329 Query: 621 gcgacgccctcgacgcctgctgcatggtccacgaccactgcgttgccgccaacaacaatg 680 ||||||| |||||||||||||||||||| |||||||||||||| | | || ||||| | | Sbjct: 330 gcgacgcgctcgacgcctgctgcatggtgcacgaccactgcgtcgacacccacaacgacg 389 Query: 681 actacctgaacaccaggtgcaacgagaacctgctgggctgcctggacggggtgaagccgg 740 ||||||||||||| | ||||||||||||||||||| ||||| | ||| |||||| | Sbjct: 390 actacctgaacacgatgtgcaacgagaacctgctgagctgcatcgaccgggtga-----g 444 Query: 741 cggggccgacgttcccggggaataagtgcggcgtcgccgagacggcgttggtcataaagg 800 ||||| |||||||||||||||| |||||| ||||| | ||||||||| ||||| | || Sbjct: 445 cgggg-cgacgttcccggggaacaagtgcaacgtcggccagacggcgtccgtcatcaggg 503 Query: 801 gcgtcatcgagacggccgtgctcgcagggaagattcttcacaagcgcgac 850 | |||||||||||||||||| |||| || ||||| || |||||||||||| Sbjct: 504 gggtcatcgagacggccgtgttcgccggcaagatcctccacaagcgcgac 553 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 139 tgctgcttctcctctcgctggtggcggcttcgtgggggcttgaggtcggcgacct 193 ||||||||||||||| ||||||| |||| ||| |||||||| | |||||||||| Sbjct: 141 tgctgcttctcctcttgctggtgacggcgtcgcgggggcttaacatcggcgacct 195
>gb|AC125495.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0085M22, complete sequence Length = 145104 Score = 149 bits (75), Expect = 2e-32 Identities = 96/103 (93%) Strand = Plus / Plus Query: 561 tgctgaggtacggcaaatactgcggaatcctctacagcggctgccccggcgagaagccct 620 |||||||||||||||| |||||||| |||||||||||||| ||||||||||||| ||| | Sbjct: 82693 tgctgaggtacggcaagtactgcgggatcctctacagcgggtgccccggcgagaggccat 82752 Query: 621 gcgacgccctcgacgcctgctgcatggtccacgaccactgcgt 663 ||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 82753 gcgacgcgctcgacgcctgctgcatggtgcacgaccactgcgt 82795 Score = 117 bits (59), Expect = 9e-23 Identities = 144/171 (84%), Gaps = 6/171 (3%) Strand = Plus / Plus Query: 680 gactacctgaacaccaggtgcaacgagaacctgctgggctgcctggacggggtgaagccg 739 |||||||||||||| | ||||||||||||||||||| ||||| | ||| |||||| Sbjct: 83338 gactacctgaacacgatgtgcaacgagaacctgctgagctgcatcgaccgggtga----- 83392 Query: 740 gcggggccgacgttcccggggaataagtgcggcgtcgccgagacggcgttggtcataaag 799 |||||| |||||||||||||||| |||||| ||||| | ||||||||| ||||| | | Sbjct: 83393 gcgggg-cgacgttcccggggaacaagtgcaacgtcggccagacggcgtccgtcatcagg 83451 Query: 800 ggcgtcatcgagacggccgtgctcgcagggaagattcttcacaagcgcgac 850 || |||||||||||||||||| |||| || ||||| || |||||||||||| Sbjct: 83452 ggggtcatcgagacggccgtgttcgccggcaagatcctccacaagcgcgac 83502 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 139 tgctgcttctcctctcgctggtggcggcttcgtgggggcttgaggtcggcgacct 193 ||||||||||||||| ||||||| |||| ||| |||||||| | |||||||||| Sbjct: 82140 tgctgcttctcctcttgctggtgacggcgtcgcgggggcttaacatcggcgacct 82194
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 149 bits (75), Expect = 2e-32 Identities = 96/103 (93%) Strand = Plus / Plus Query: 561 tgctgaggtacggcaaatactgcggaatcctctacagcggctgccccggcgagaagccct 620 |||||||||||||||| |||||||| |||||||||||||| ||||||||||||| ||| | Sbjct: 8456985 tgctgaggtacggcaagtactgcgggatcctctacagcgggtgccccggcgagaggccat 8457044 Query: 621 gcgacgccctcgacgcctgctgcatggtccacgaccactgcgt 663 ||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 8457045 gcgacgcgctcgacgcctgctgcatggtgcacgaccactgcgt 8457087 Score = 117 bits (59), Expect = 9e-23 Identities = 144/171 (84%), Gaps = 6/171 (3%) Strand = Plus / Plus Query: 680 gactacctgaacaccaggtgcaacgagaacctgctgggctgcctggacggggtgaagccg 739 |||||||||||||| | ||||||||||||||||||| ||||| | ||| |||||| Sbjct: 8457630 gactacctgaacacgatgtgcaacgagaacctgctgagctgcatcgaccgggtga----- 8457684 Query: 740 gcggggccgacgttcccggggaataagtgcggcgtcgccgagacggcgttggtcataaag 799 |||||| |||||||||||||||| |||||| ||||| | ||||||||| ||||| | | Sbjct: 8457685 gcgggg-cgacgttcccggggaacaagtgcaacgtcggccagacggcgtccgtcatcagg 8457743 Query: 800 ggcgtcatcgagacggccgtgctcgcagggaagattcttcacaagcgcgac 850 || |||||||||||||||||| |||| || ||||| || |||||||||||| Sbjct: 8457744 ggggtcatcgagacggccgtgttcgccggcaagatcctccacaagcgcgac 8457794 Score = 109 bits (55), Expect = 2e-20 Identities = 85/95 (89%) Strand = Plus / Plus Query: 569 tacggcaaatactgcggaatcctctacagcggctgccccggcgagaagccctgcgacgcc 628 |||||||| |||||||| ||||| ||||||||||||||||||||| |||| ||||||| Sbjct: 28345536 tacggcaagtactgcggcatcctgtacagcggctgccccggcgagcagccgtgcgacgag 28345595 Query: 629 ctcgacgcctgctgcatggtccacgaccactgcgt 663 |||||||||||||||||| ||||||| ||||||| Sbjct: 28345596 ctcgacgcctgctgcatgcaccacgacaactgcgt 28345630 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 139 tgctgcttctcctctcgctggtggcggcttcgtgggggcttgaggtcggcgacct 193 ||||||||||||||| ||||||| |||| ||| |||||||| | |||||||||| Sbjct: 8456432 tgctgcttctcctcttgctggtgacggcgtcgcgggggcttaacatcggcgacct 8456486
>ref|NM_001057569.1| Oryza sativa (japonica cultivar-group) Os03g0708000 (Os03g0708000) mRNA, complete cds Length = 1253 Score = 109 bits (55), Expect = 2e-20 Identities = 85/95 (89%) Strand = Plus / Plus Query: 569 tacggcaaatactgcggaatcctctacagcggctgccccggcgagaagccctgcgacgcc 628 |||||||| |||||||| ||||| ||||||||||||||||||||| |||| ||||||| Sbjct: 588 tacggcaagtactgcggcatcctgtacagcggctgccccggcgagcagccgtgcgacgag 647 Query: 629 ctcgacgcctgctgcatggtccacgaccactgcgt 663 |||||||||||||||||| ||||||| ||||||| Sbjct: 648 ctcgacgcctgctgcatgcaccacgacaactgcgt 682
>gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genomic sequence, complete sequence Length = 122497 Score = 109 bits (55), Expect = 2e-20 Identities = 85/95 (89%) Strand = Plus / Plus Query: 569 tacggcaaatactgcggaatcctctacagcggctgccccggcgagaagccctgcgacgcc 628 |||||||| |||||||| ||||| ||||||||||||||||||||| |||| ||||||| Sbjct: 105353 tacggcaagtactgcggcatcctgtacagcggctgccccggcgagcagccgtgcgacgag 105412 Query: 629 ctcgacgcctgctgcatggtccacgaccactgcgt 663 |||||||||||||||||| ||||||| ||||||| Sbjct: 105413 ctcgacgcctgctgcatgcaccacgacaactgcgt 105447
>dbj|AK105828.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E04, full insert sequence Length = 1253 Score = 109 bits (55), Expect = 2e-20 Identities = 85/95 (89%) Strand = Plus / Plus Query: 569 tacggcaaatactgcggaatcctctacagcggctgccccggcgagaagccctgcgacgcc 628 |||||||| |||||||| ||||| ||||||||||||||||||||| |||| ||||||| Sbjct: 588 tacggcaagtactgcggcatcctgtacagcggctgccccggcgagcagccgtgcgacgag 647 Query: 629 ctcgacgcctgctgcatggtccacgaccactgcgt 663 |||||||||||||||||| ||||||| ||||||| Sbjct: 648 ctcgacgcctgctgcatgcaccacgacaactgcgt 682
>gb|AY106746.1| Zea mays PCO098977 mRNA sequence Length = 891 Score = 97.6 bits (49), Expect = 8e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 567 ggtacggcaaatactgcggaatcctctacagcggctgccccggcgagaagccctgcgacg 626 |||||||||| |||||||| ||| | ||||||||||||||||||||| ||| ||||||| Sbjct: 487 ggtacggcaagtactgcggcatcatgtacagcggctgccccggcgagccgccgtgcgacg 546 Query: 627 ccctcgacgcctgctgcatggtccacgaccactgcgt 663 | || ||||||||||||||| ||||||| ||||||| Sbjct: 547 cgctggacgcctgctgcatgcaccacgacaactgcgt 583
>emb|CT835705.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN079B09, full insert sequence Length = 676 Score = 77.8 bits (39), Expect = 7e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 593 tacagcggctgccccggcgagaagccctgcgacgccctcgacgcctgctgcatggtccac 652 |||| ||| |||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 274 tacaccgggtgccccggcgaggccccctgcgacgccctcgacgcctgctgcatgctccac 333 Query: 653 gac 655 ||| Sbjct: 334 gac 336
>gb|AC134053.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0005H02, complete sequence Length = 144882 Score = 77.8 bits (39), Expect = 7e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 593 tacagcggctgccccggcgagaagccctgcgacgccctcgacgcctgctgcatggtccac 652 |||| ||| |||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 46293 tacaccgggtgccccggcgaggccccctgcgacgccctcgacgcctgctgcatgctccac 46234 Query: 653 gac 655 ||| Sbjct: 46233 gac 46231
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 77.8 bits (39), Expect = 7e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 593 tacagcggctgccccggcgagaagccctgcgacgccctcgacgcctgctgcatggtccac 652 |||| ||| |||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 19471645 tacaccgggtgccccggcgaggccccctgcgacgccctcgacgcctgctgcatgctccac 19471586 Query: 653 gac 655 ||| Sbjct: 19471585 gac 19471583
>ref|NM_001055157.1| Oryza sativa (japonica cultivar-group) Os02g0831700 (Os02g0831700) mRNA, complete cds Length = 974 Score = 50.1 bits (25), Expect = 0.017 Identities = 43/49 (87%) Strand = Plus / Plus Query: 615 agccctgcgacgccctcgacgcctgctgcatggtccacgaccactgcgt 663 |||||||||| | |||||||||||||||| | ||||||||||||||| Sbjct: 220 agccctgcgatgacctcgacgcctgctgccgcgaccacgaccactgcgt 268
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 50.1 bits (25), Expect = 0.017 Identities = 43/49 (87%) Strand = Plus / Minus Query: 615 agccctgcgacgccctcgacgcctgctgcatggtccacgaccactgcgt 663 |||||||||| | |||||||||||||||| | ||||||||||||||| Sbjct: 35790324 agccctgcgatgacctcgacgcctgctgccgcgaccacgaccactgcgt 35790276
>emb|AJ238116.1|OSA238116 Oryza sativa mRNA for putative phospholipase A2, isoform I Length = 804 Score = 50.1 bits (25), Expect = 0.017 Identities = 43/49 (87%) Strand = Plus / Plus Query: 615 agccctgcgacgccctcgacgcctgctgcatggtccacgaccactgcgt 663 |||||||||| | |||||||||||||||| | ||||||||||||||| Sbjct: 209 agccctgcgatgacctcgacgcctgctgccgcgaccacgaccactgcgt 257
>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1149_C12 Length = 120743 Score = 50.1 bits (25), Expect = 0.017 Identities = 43/49 (87%) Strand = Plus / Minus Query: 615 agccctgcgacgccctcgacgcctgctgcatggtccacgaccactgcgt 663 |||||||||| | |||||||||||||||| | ||||||||||||||| Sbjct: 61039 agccctgcgatgacctcgacgcctgctgccgcgaccacgaccactgcgt 60991
>dbj|AK108410.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-H01, full insert sequence Length = 973 Score = 50.1 bits (25), Expect = 0.017 Identities = 43/49 (87%) Strand = Plus / Plus Query: 615 agccctgcgacgccctcgacgcctgctgcatggtccacgaccactgcgt 663 |||||||||| | |||||||||||||||| | ||||||||||||||| Sbjct: 219 agccctgcgatgacctcgacgcctgctgccgcgaccacgaccactgcgt 267
>dbj|BA000007.2| Escherichia coli O157:H7 str. Sakai DNA, complete genome Length = 5498450 Score = 48.1 bits (24), Expect = 0.067 Identities = 27/28 (96%) Strand = Plus / Minus Query: 457 cagatttcgtgttgtgtttcattttcag 484 ||||||||||||||| |||||||||||| Sbjct: 4411572 cagatttcgtgttgtttttcattttcag 4411545
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 48.1 bits (24), Expect = 0.067 Identities = 27/28 (96%) Strand = Plus / Minus Query: 457 cagatttcgtgttgtgtttcattttcag 484 ||||||||||||||| |||||||||||| Sbjct: 4478799 cagatttcgtgttgtttttcattttcag 4478772
>gb|AC122446.4| Mus musculus BAC clone RP24-240N12 from chromosome 17, complete sequence Length = 182820 Score = 46.1 bits (23), Expect = 0.26 Identities = 26/27 (96%) Strand = Plus / Plus Query: 902 tcctacttaggagaaaataatgtggta 928 ||||||||||||||||| ||||||||| Sbjct: 41779 tcctacttaggagaaaaaaatgtggta 41805
>gb|AC154346.3| Mus musculus BAC clone RP24-503E4 from chromosome 17, complete sequence Length = 167603 Score = 46.1 bits (23), Expect = 0.26 Identities = 26/27 (96%) Strand = Plus / Plus Query: 902 tcctacttaggagaaaataatgtggta 928 ||||||||||||||||| ||||||||| Sbjct: 158362 tcctacttaggagaaaaaaatgtggta 158388
>gb|CP000468.1| Escherichia coli APEC O1, complete genome Length = 5082025 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 459 gatttcgtgttgtgtttcattttcag 484 ||||||||||||| |||||||||||| Sbjct: 3969006 gatttcgtgttgtttttcattttcag 3968981
>gb|CP000247.1| Escherichia coli 536, complete genome Length = 4938920 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 459 gatttcgtgttgtgtttcattttcag 484 ||||||||||||| |||||||||||| Sbjct: 3783835 gatttcgtgttgtttttcattttcag 3783810
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 459 gatttcgtgttgtgtttcattttcag 484 ||||||||||||| |||||||||||| Sbjct: 3936212 gatttcgtgttgtttttcattttcag 3936187
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 459 gatttcgtgttgtgtttcattttcag 484 ||||||||||||| |||||||||||| Sbjct: 4108178 gatttcgtgttgtttttcattttcag 4108153
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 706 gaacctgctgggctgcctggac 727 |||||||||||||||||||||| Sbjct: 3929705 gaacctgctgggctgcctggac 3929726
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 gttgcttgctgcttctcctctc 154 |||||||||||||||||||||| Sbjct: 21763146 gttgcttgctgcttctcctctc 21763125
>gb|AY524791.1| Verticillium dahliae allergen Asp f2-like protein mRNA, complete cds Length = 1136 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 598 cggctgccccggcgagaagccc 619 |||||||||||||||||||||| Sbjct: 855 cggctgccccggcgagaagccc 876
>dbj|AP005460.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0610D01 Length = 146418 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 gttgcttgctgcttctcctctc 154 |||||||||||||||||||||| Sbjct: 21227 gttgcttgctgcttctcctctc 21206
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 459 gatttcgtgttgtgtttcattttcag 484 ||||||||||||| |||||||||||| Sbjct: 3735801 gatttcgtgttgtttttcattttcag 3735826
>gb|AC103646.6| Mus musculus chromosome 3, clone RP24-549G23, complete sequence Length = 130631 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 471 tgtttcattttcagttgaaca 491 ||||||||||||||||||||| Sbjct: 41522 tgtttcattttcagttgaaca 41502
>gb|BC080097.1| Xenopus laevis MGC84327 protein, mRNA (cDNA clone MGC:84327 IMAGE:6957855), complete cds Length = 1908 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 705 agaacctgctgggctgcctgg 725 ||||||||||||||||||||| Sbjct: 1556 agaacctgctgggctgcctgg 1576
>gb|AC158932.5| Mus musculus chromosome 3, clone RP24-338G13, complete sequence Length = 159429 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 471 tgtttcattttcagttgaaca 491 ||||||||||||||||||||| Sbjct: 87827 tgtttcattttcagttgaaca 87847
>gb|AC162894.4| Mus musculus chromosome 3, clone RP23-326A24, complete sequence Length = 187598 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 471 tgtttcattttcagttgaaca 491 ||||||||||||||||||||| Sbjct: 129442 tgtttcattttcagttgaaca 129462
>gb|AC117197.3| Mus musculus BAC clone RP23-127A21 from 16, complete sequence Length = 211410 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 aacaataatggagtgaagtaactga 512 |||||||||||||| |||||||||| Sbjct: 47337 aacaataatggagtcaagtaactga 47313
>gb|AC009831.21| Homo sapiens chromosome , clone RP11-326K13, complete sequence Length = 179409 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 908 ttaggagaaaataatgtggta 928 ||||||||||||||||||||| Sbjct: 53420 ttaggagaaaataatgtggta 53400
>emb|BX927114.16| Zebrafish DNA sequence from clone DKEY-1C7 in linkage group 1, complete sequence Length = 170755 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 468 ttgtgtttcattttcagttgaacaa 492 ||||||||| ||||||||||||||| Sbjct: 100385 ttgtgtttcgttttcagttgaacaa 100361 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 160,571,806 Number of extensions: 8402981 Number of successful extensions: 154753 Number of sequences better than 10.0: 37 Number of HSP's gapped: 154750 Number of HSP's successfully gapped: 45 Length of query: 1086 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1063 Effective length of database: 18,503,978,556 Effective search space: 19669729205028 Effective search space used: 19669729205028 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
