ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf98b09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK122183:Os10g0481400 125 3e-29
2AK121098:Os10g0481400 125 3e-29
3Os01g0772700:Os01g0772700 28 6.2
4AK101121:Os01g0950900 27 8.0

>AK122183:Os10g0481400 |
          Length = 92
 Score =  125 bits (313), Expect = 3e-29
 Identities = 64/82 (78%), Positives = 68/82 (82%), Gaps = 1/82 (1%)
 Frame = +3

Query: 102 QERLLGFALGSVSMGGFVLHQRRSIYRSLADNDAVSGGASF-SYQTSETTGRGVSAEMAH 278
           QERLLGFALGSVSMGGFVLHQRR+IYRSLAD DA +  + F SYQ SET  R  S E+AH
Sbjct: 11  QERLLGFALGSVSMGGFVLHQRRAIYRSLADADAAAAPSPFSSYQPSETRSRTSSTELAH 70

Query: 279 VWNKAVDETLGRLVVYLSSRGW 344
           VWNK VDETLGRLV YLSSRGW
Sbjct: 71  VWNKGVDETLGRLVAYLSSRGW 92



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>AK121098:Os10g0481400 |
          Length = 122

 Score =  125 bits (313), Expect = 3e-29
 Identities = 64/82 (78%), Positives = 68/82 (82%), Gaps = 1/82 (1%)
 Frame = +3

Query: 102 QERLLGFALGSVSMGGFVLHQRRSIYRSLADNDAVSGGASF-SYQTSETTGRGVSAEMAH 278
           QERLLGFALGSVSMGGFVLHQRR+IYRSLAD DA +  + F SYQ SET  R  S E+AH
Sbjct: 41  QERLLGFALGSVSMGGFVLHQRRAIYRSLADADAAAAPSPFSSYQPSETRSRTSSTELAH 100

Query: 279 VWNKAVDETLGRLVVYLSSRGW 344
           VWNK VDETLGRLV YLSSRGW
Sbjct: 101 VWNKGVDETLGRLVAYLSSRGW 122



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>Os01g0772700:Os01g0772700 |
          Length = 1450

 Score = 27.7 bits (60), Expect = 6.2
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 383 TRCCAKLRYMCSAISQYQWLIIMLSFA 463
           T CC +L  +C+A+    WL I+ S +
Sbjct: 452 TECCGQLALLCAAMVNSSWLTILDSLS 478



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>AK101121:Os01g0950900 |
          Length = 701

 Score = 27.3 bits (59), Expect = 8.0
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = +2

Query: 275 SRVEQGSGRDTWPACCVS*LSWMVIQALRVKHYSLITRCCAKLRYMCSAISQYQWLI 445
           S V +GS R      C+  +S+ V+  L  +H  + +R  A L+Y      QY  L+
Sbjct: 134 SNVARGSNRLWVHFACLCFISFYVVYLLHKEHKEMSSRRIAHLKYHRKRPDQYTILV 190


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 15,951,729
Number of extensions: 333147
Number of successful extensions: 740
Number of sequences better than 10.0: 4
Number of HSP's gapped: 738
Number of HSP's successfully gapped: 4
Length of query: 202
Length of database: 15,399,855
Length adjustment: 96
Effective length of query: 106
Effective length of database: 11,555,919
Effective search space: 1224927414
Effective search space used: 1224927414
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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