ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf95o07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001065238.1| Oryza sativa (japonica cultivar-group) Os07g0106100 (Os07g0106100) mRNA, complete cds Length = 3125 Score = 775 bits (391), Expect = 0.0 Identities = 757/879 (86%) Strand = Plus / Plus Query: 1713 ggacccaaatgaacttagtccaagaacttacagcattaaaaggatcgaggattggatcag 1772 ||||||| |||||||| |||||||||| ||||||||||| || ||||||||||||| Sbjct: 1797 ggacccagatgaactttccccaagaacttttagcattaaaagaattgaggattggatcaa 1856 Query: 1773 ccaaattgatattgacagtgacatcattgtggaggagcagggagaaagttcaagttctgc 1832 |||||||||||||||| || || | |||| |||||||| ||||||||||||| || | Sbjct: 1857 ccaaattgatattgacgatggcacccttgtcgaggagcaaggagaaagttcaaactcggt 1916 Query: 1833 atcaacaaaatatagcgagtcggtgatcagtgtttctgctgtgcgccctgatgctaaaag 1892 | |||||||||| ||| ||||| ||||| ||||||| || |||||||||||||| Sbjct: 1917 gttgacaaaatataatgagccggtggctggtgttcctgctgtccggcctgatgctaaaag 1976 Query: 1893 tcctcttggcatggagatagcttacacttatatttcaaagttgactcctgtttcttcatc 1952 |||||||||||||||||||||||||||||||||||| || |||||||| |||||| || Sbjct: 1977 tcctcttggcatggagatagcttacacttatatttcgaaattgactccgacttcttcgtc 2036 Query: 1953 tgcacaattggcaaaccttggtttggttgcaatcccaagactgagtgcgttctcaggcct 2012 |||||||| | ||||||||| ||||||||||| |||||| |||| || |||| |||||| Sbjct: 2037 ggcacaattaggaaaccttggcttggttgcaattccaagattgagcgctttcttaggcct 2096 Query: 2013 acggctgttgaacttatcagggaactcaatagtgcgcataactgcaggagctcttcctaa 2072 ||| |||||||||| || ||||| ||||| ||||| ||||||||||| |||||||| | Sbjct: 2097 acgcttgttgaacttgtctgggaattcaattgtgcgaataactgcaggggctcttccaag 2156 Query: 2073 aggtcttcacatgttaagcctgtcgaagaataatatctcaattattgaaggccttagaga 2132 |||||||||||||||||| |||| |||||||||||||||| ||||| ||||||||||| Sbjct: 2157 gggtcttcacatgttaagcttgtcaaagaataatatctcaacaattgagggccttagaga 2216 Query: 2133 actaacacgcttacgcttgctggacataagctataataggatctctagaattggccacgg 2192 | | |||||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 2217 attgacacgcttacgcttactggacatcagctataataggatatccagaattggccatgg 2276 Query: 2193 tttggcttcatgttctgctttgaaggagttatatctggctgggaacaagatcagtgaggt 2252 |||||| || |||||| ||||||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 2277 tttggcgtcctgttcttctttgaaggagttgtatctgggtggtaacaagatcagtgaggt 2336 Query: 2253 agatggccttcaccgccttctgaagctaaaagttctggacttgcgccacaacaagatctc 2312 |||||| |||||||| |||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 2337 agatggtcttcaccgtcttctgaagctaaaggttctggacctgcgccacaacaagatctc 2396 Query: 2313 tacatccaagggccttggtcaactggctgcgaactataattccctcgaagccatcaacct 2372 ||||| ||||| |||||||| |||||||| ||||||| ||| || |||||| | ||||| Sbjct: 2397 cacatcgaaggggcttggtcagctggctgcaaactatagttctcttgaagccgtaaacct 2456 Query: 2373 agatggcaacccagcacagaagaatgtaggtgaccagcacctgaagaagtacctgttagg 2432 |||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 2457 agatgggaacccagcgcagaagaatgtaggtgatgagcacctgaagaagtaccttgtagg 2516 Query: 2433 tctcttgccaaaccttgctgtgtacaacaagcagcctgtaagagcaactggctcaaaaga 2492 |||| |||||||||||| | | ||||||||||| ||| |||||||| ||||||||||||| Sbjct: 2517 tctcctgccaaaccttggtttctacaacaagcatcctataagagcatctggctcaaaaga 2576 Query: 2493 ggtctcggaccgtcacacacgcaagatctcttcctcccatcgctctgaccgcagttccag 2552 ||| |||||||| ||||| |||||||| ||||| |||||||| || || ||||| || Sbjct: 2577 ggtatcggaccggcacacccgcaagatttcttcttcccatcgttccgatcgcagcggtag 2636 Query: 2553 atcggaccgcaaatcttccaggttggtgcctggcacatc 2591 |||||| || ||||| || ||||||||| || ||||||| Sbjct: 2637 atcggatcgtaaatcctcgaggttggtggctagcacatc 2675 Score = 107 bits (54), Expect = 2e-19 Identities = 220/274 (80%), Gaps = 6/274 (2%) Strand = Plus / Plus Query: 649 gattctcaggaacaaacagtgaagttcactgctggatcagcgagcccaagccagatggcc 708 ||||||||||| ||||||||||||| || ||||||||||| || |||| |||| || | Sbjct: 685 gattctcaggatcaaacagtgaagtccaacgctggatcagcaagtccaaaccagttgaca 744 Query: 709 ggtgaaaataaccattcagttgctaatgggcagtatgatattaactcatcatctcaccaa 768 | || |||| | |||||| || || |||||||||||| || | |||| ||||| ||| Sbjct: 745 gatgtaaatgatcattcaaatgttagccggcagtatgatactagcccatcgtctcatcaa 804 Query: 769 gaatgctggagatctgatgaatggagtagacatgcatgctctgatgatgacacggaggag 828 ||||||||||||||||| || | || ||| ||||||||||| ||||||| ||||| Sbjct: 805 gaatgctggagatctgaagacttgaacagatatgcatgctct---gatgacagtaaggag 861 Query: 829 aaagttgggcacctacagaagagccagtctcttggaaacatgcttcaagaggattgtgat 888 ||| |||||| ||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 862 tc---tggccacctaaagaagagcctatctcttggaaacatgcttcacaaggatcatgat 918 Query: 889 catcatggcagtgaaggtactgaatgtgatatta 922 |||||| ||||||||| ||||||||||||||| Sbjct: 919 catcattttagtgaaggtgctgaatgtgatatta 952 Score = 97.6 bits (49), Expect = 2e-16 Identities = 91/105 (86%) Strand = Plus / Plus Query: 1101 ttatgaccatagcaaatttccaaggtcacaatctgccatatttcagaataattctgatag 1160 ||||||||| | |||||||||||| ||||||||||| ||||||||||||||||| || | Sbjct: 1119 ttatgaccagaccaaatttccaagatcacaatctgctatatttcagaataattccaattg 1178 Query: 1161 tgatcgagaaggttctgttgattctgagagactaggcccccgttg 1205 || | ||||||||||| ||||||||||| |||||| || ||||| Sbjct: 1179 tggtacagaaggttctgctgattctgagatactagggcctcgttg 1223 Score = 83.8 bits (42), Expect = 3e-12 Identities = 96/114 (84%) Strand = Plus / Plus Query: 209 atgcaacctcctggaatagtctagttcctaaatccttcttccattctggcagatatcaag 268 ||||| ||| ||||||| |||||||||| |||| ||| |||| ||||||||||||||| Sbjct: 222 atgcatccttctggaattatctagttccttaatctttcgtccagcctggcagatatcaag 281 Query: 269 agatcattcaggtctcgcacctctgagtgggtgtggatttgcaacaattctgca 322 || ||| || |||||||||||| ||||||||||| |||||||| | |||||| Sbjct: 282 aggtcaggcacatctcgcacctctaagtgggtgtgggtttgcaactactctgca 335 Score = 71.9 bits (36), Expect = 1e-08 Identities = 39/40 (97%) Strand = Plus / Plus Query: 539 agagttgacttatggttaggtttttctgcttttcatcctc 578 ||||||||||||||||||||||||||||||| |||||||| Sbjct: 542 agagttgacttatggttaggtttttctgcttctcatcctc 581 Score = 61.9 bits (31), Expect = 1e-05 Identities = 40/43 (93%) Strand = Plus / Plus Query: 1282 aaatcaaatttgcatgtgctttgtgctggaccttcttcgccag 1324 |||||||||||| |||||| |||||||||||||||||| |||| Sbjct: 1345 aaatcaaatttggatgtgcattgtgctggaccttcttctccag 1387 Score = 56.0 bits (28), Expect = 8e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 1419 ttttgtgagggatgggatgctaagtcatgactactgggat 1458 |||||| ||||||||||||||||||||||| || |||||| Sbjct: 1485 ttttgttagggatgggatgctaagtcatgaatattgggat 1524 Score = 46.1 bits (23), Expect = 0.74 Identities = 47/55 (85%) Strand = Plus / Plus Query: 1533 catcaatggtgctttagatcaagagagggaagagaaattgtggaacagaaatagc 1587 |||||||| ||| ||||||||||||| |||| || |||||||||||| ||||| Sbjct: 1620 catcaatgaagctctagatcaagagagaaaagataacttgtggaacagagatagc 1674
>dbj|AK067091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096G23, full insert sequence Length = 3126 Score = 775 bits (391), Expect = 0.0 Identities = 757/879 (86%) Strand = Plus / Plus Query: 1713 ggacccaaatgaacttagtccaagaacttacagcattaaaaggatcgaggattggatcag 1772 ||||||| |||||||| |||||||||| ||||||||||| || ||||||||||||| Sbjct: 1798 ggacccagatgaactttccccaagaacttttagcattaaaagaattgaggattggatcaa 1857 Query: 1773 ccaaattgatattgacagtgacatcattgtggaggagcagggagaaagttcaagttctgc 1832 |||||||||||||||| || || | |||| |||||||| ||||||||||||| || | Sbjct: 1858 ccaaattgatattgacgatggcacccttgtcgaggagcaaggagaaagttcaaactcggt 1917 Query: 1833 atcaacaaaatatagcgagtcggtgatcagtgtttctgctgtgcgccctgatgctaaaag 1892 | |||||||||| ||| ||||| ||||| ||||||| || |||||||||||||| Sbjct: 1918 gttgacaaaatataatgagccggtggctggtgttcctgctgtccggcctgatgctaaaag 1977 Query: 1893 tcctcttggcatggagatagcttacacttatatttcaaagttgactcctgtttcttcatc 1952 |||||||||||||||||||||||||||||||||||| || |||||||| |||||| || Sbjct: 1978 tcctcttggcatggagatagcttacacttatatttcgaaattgactccgacttcttcgtc 2037 Query: 1953 tgcacaattggcaaaccttggtttggttgcaatcccaagactgagtgcgttctcaggcct 2012 |||||||| | ||||||||| ||||||||||| |||||| |||| || |||| |||||| Sbjct: 2038 ggcacaattaggaaaccttggcttggttgcaattccaagattgagcgctttcttaggcct 2097 Query: 2013 acggctgttgaacttatcagggaactcaatagtgcgcataactgcaggagctcttcctaa 2072 ||| |||||||||| || ||||| ||||| ||||| ||||||||||| |||||||| | Sbjct: 2098 acgcttgttgaacttgtctgggaattcaattgtgcgaataactgcaggggctcttccaag 2157 Query: 2073 aggtcttcacatgttaagcctgtcgaagaataatatctcaattattgaaggccttagaga 2132 |||||||||||||||||| |||| |||||||||||||||| ||||| ||||||||||| Sbjct: 2158 gggtcttcacatgttaagcttgtcaaagaataatatctcaacaattgagggccttagaga 2217 Query: 2133 actaacacgcttacgcttgctggacataagctataataggatctctagaattggccacgg 2192 | | |||||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 2218 attgacacgcttacgcttactggacatcagctataataggatatccagaattggccatgg 2277 Query: 2193 tttggcttcatgttctgctttgaaggagttatatctggctgggaacaagatcagtgaggt 2252 |||||| || |||||| ||||||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 2278 tttggcgtcctgttcttctttgaaggagttgtatctgggtggtaacaagatcagtgaggt 2337 Query: 2253 agatggccttcaccgccttctgaagctaaaagttctggacttgcgccacaacaagatctc 2312 |||||| |||||||| |||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 2338 agatggtcttcaccgtcttctgaagctaaaggttctggacctgcgccacaacaagatctc 2397 Query: 2313 tacatccaagggccttggtcaactggctgcgaactataattccctcgaagccatcaacct 2372 ||||| ||||| |||||||| |||||||| ||||||| ||| || |||||| | ||||| Sbjct: 2398 cacatcgaaggggcttggtcagctggctgcaaactatagttctcttgaagccgtaaacct 2457 Query: 2373 agatggcaacccagcacagaagaatgtaggtgaccagcacctgaagaagtacctgttagg 2432 |||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 2458 agatgggaacccagcgcagaagaatgtaggtgatgagcacctgaagaagtaccttgtagg 2517 Query: 2433 tctcttgccaaaccttgctgtgtacaacaagcagcctgtaagagcaactggctcaaaaga 2492 |||| |||||||||||| | | ||||||||||| ||| |||||||| ||||||||||||| Sbjct: 2518 tctcctgccaaaccttggtttctacaacaagcatcctataagagcatctggctcaaaaga 2577 Query: 2493 ggtctcggaccgtcacacacgcaagatctcttcctcccatcgctctgaccgcagttccag 2552 ||| |||||||| ||||| |||||||| ||||| |||||||| || || ||||| || Sbjct: 2578 ggtatcggaccggcacacccgcaagatttcttcttcccatcgttccgatcgcagcggtag 2637 Query: 2553 atcggaccgcaaatcttccaggttggtgcctggcacatc 2591 |||||| || ||||| || ||||||||| || ||||||| Sbjct: 2638 atcggatcgtaaatcctcgaggttggtggctagcacatc 2676 Score = 107 bits (54), Expect = 2e-19 Identities = 220/274 (80%), Gaps = 6/274 (2%) Strand = Plus / Plus Query: 649 gattctcaggaacaaacagtgaagttcactgctggatcagcgagcccaagccagatggcc 708 ||||||||||| ||||||||||||| || ||||||||||| || |||| |||| || | Sbjct: 686 gattctcaggatcaaacagtgaagtccaacgctggatcagcaagtccaaaccagttgaca 745 Query: 709 ggtgaaaataaccattcagttgctaatgggcagtatgatattaactcatcatctcaccaa 768 | || |||| | |||||| || || |||||||||||| || | |||| ||||| ||| Sbjct: 746 gatgtaaatgatcattcaaatgttagccggcagtatgatactagcccatcgtctcatcaa 805 Query: 769 gaatgctggagatctgatgaatggagtagacatgcatgctctgatgatgacacggaggag 828 ||||||||||||||||| || | || ||| ||||||||||| ||||||| ||||| Sbjct: 806 gaatgctggagatctgaagacttgaacagatatgcatgctct---gatgacagtaaggag 862 Query: 829 aaagttgggcacctacagaagagccagtctcttggaaacatgcttcaagaggattgtgat 888 ||| |||||| ||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 863 tc---tggccacctaaagaagagcctatctcttggaaacatgcttcacaaggatcatgat 919 Query: 889 catcatggcagtgaaggtactgaatgtgatatta 922 |||||| ||||||||| ||||||||||||||| Sbjct: 920 catcattttagtgaaggtgctgaatgtgatatta 953 Score = 97.6 bits (49), Expect = 2e-16 Identities = 91/105 (86%) Strand = Plus / Plus Query: 1101 ttatgaccatagcaaatttccaaggtcacaatctgccatatttcagaataattctgatag 1160 ||||||||| | |||||||||||| ||||||||||| ||||||||||||||||| || | Sbjct: 1120 ttatgaccagaccaaatttccaagatcacaatctgctatatttcagaataattccaattg 1179 Query: 1161 tgatcgagaaggttctgttgattctgagagactaggcccccgttg 1205 || | ||||||||||| ||||||||||| |||||| || ||||| Sbjct: 1180 tggtacagaaggttctgctgattctgagatactagggcctcgttg 1224 Score = 91.7 bits (46), Expect = 1e-14 Identities = 97/114 (85%) Strand = Plus / Plus Query: 209 atgcaacctcctggaatagtctagttcctaaatccttcttccattctggcagatatcaag 268 ||||| ||| ||||||| ||||||||||| |||| ||| |||| ||||||||||||||| Sbjct: 223 atgcatccttctggaattgtctagttccttaatctttcgtccagcctggcagatatcaag 282 Query: 269 agatcattcaggtctcgcacctctgagtgggtgtggatttgcaacaattctgca 322 || ||| || |||||||||||| ||||||||||| |||||||| | |||||| Sbjct: 283 aggtcaggcacatctcgcacctctaagtgggtgtgggtttgcaactactctgca 336 Score = 71.9 bits (36), Expect = 1e-08 Identities = 39/40 (97%) Strand = Plus / Plus Query: 539 agagttgacttatggttaggtttttctgcttttcatcctc 578 ||||||||||||||||||||||||||||||| |||||||| Sbjct: 543 agagttgacttatggttaggtttttctgcttctcatcctc 582 Score = 61.9 bits (31), Expect = 1e-05 Identities = 40/43 (93%) Strand = Plus / Plus Query: 1282 aaatcaaatttgcatgtgctttgtgctggaccttcttcgccag 1324 |||||||||||| |||||| |||||||||||||||||| |||| Sbjct: 1346 aaatcaaatttggatgtgcattgtgctggaccttcttctccag 1388 Score = 56.0 bits (28), Expect = 8e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 1419 ttttgtgagggatgggatgctaagtcatgactactgggat 1458 |||||| ||||||||||||||||||||||| || |||||| Sbjct: 1486 ttttgttagggatgggatgctaagtcatgaatattgggat 1525 Score = 46.1 bits (23), Expect = 0.74 Identities = 47/55 (85%) Strand = Plus / Plus Query: 1533 catcaatggtgctttagatcaagagagggaagagaaattgtggaacagaaatagc 1587 |||||||| ||| ||||||||||||| |||| || |||||||||||| ||||| Sbjct: 1621 catcaatgaagctctagatcaagagagaaaagataacttgtggaacagagatagc 1675
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 391 bits (197), Expect = e-104 Identities = 350/401 (87%) Strand = Plus / Plus Query: 2191 ggtttggcttcatgttctgctttgaaggagttatatctggctgggaacaagatcagtgag 2250 |||||||| || |||||| ||||||||||||| ||||||| ||| ||||||||||||||| Sbjct: 347377 ggtttggcgtcctgttcttctttgaaggagttgtatctgggtggtaacaagatcagtgag 347436 Query: 2251 gtagatggccttcaccgccttctgaagctaaaagttctggacttgcgccacaacaagatc 2310 |||||||| |||||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 347437 gtagatggtcttcaccgtcttctgaagctaaaggttctggacctgcgccacaacaagatc 347496 Query: 2311 tctacatccaagggccttggtcaactggctgcgaactataattccctcgaagccatcaac 2370 || ||||| ||||| |||||||| |||||||| ||||||| ||| || |||||| | ||| Sbjct: 347497 tccacatcgaaggggcttggtcagctggctgcaaactatagttctcttgaagccgtaaac 347556 Query: 2371 ctagatggcaacccagcacagaagaatgtaggtgaccagcacctgaagaagtacctgtta 2430 |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| || Sbjct: 347557 ctagatgggaacccagcgcagaagaatgtaggtgatgagcacctgaagaagtaccttgta 347616 Query: 2431 ggtctcttgccaaaccttgctgtgtacaacaagcagcctgtaagagcaactggctcaaaa 2490 |||||| |||||||||||| | | ||||||||||| ||| |||||||| ||||||||||| Sbjct: 347617 ggtctcctgccaaaccttggtttctacaacaagcatcctataagagcatctggctcaaaa 347676 Query: 2491 gaggtctcggaccgtcacacacgcaagatctcttcctcccatcgctctgaccgcagttcc 2550 ||||| |||||||| ||||| |||||||| ||||| |||||||| || || ||||| Sbjct: 347677 gaggtatcggaccggcacacccgcaagatttcttcttcccatcgttccgatcgcagcggt 347736 Query: 2551 agatcggaccgcaaatcttccaggttggtgcctggcacatc 2591 |||||||| || ||||| || ||||||||| || ||||||| Sbjct: 347737 agatcggatcgtaaatcctcgaggttggtggctagcacatc 347777 Score = 234 bits (118), Expect = 2e-57 Identities = 277/330 (83%) Strand = Plus / Plus Query: 1713 ggacccaaatgaacttagtccaagaacttacagcattaaaaggatcgaggattggatcag 1772 ||||||| |||||||| |||||||||| ||||||||||| || ||||||||||||| Sbjct: 346385 ggacccagatgaactttccccaagaacttttagcattaaaagaattgaggattggatcaa 346444 Query: 1773 ccaaattgatattgacagtgacatcattgtggaggagcagggagaaagttcaagttctgc 1832 |||||||||||||||| || || | |||| |||||||| ||||||||||||| || | Sbjct: 346445 ccaaattgatattgacgatggcacccttgtcgaggagcaaggagaaagttcaaactcggt 346504 Query: 1833 atcaacaaaatatagcgagtcggtgatcagtgtttctgctgtgcgccctgatgctaaaag 1892 | |||||||||| ||| ||||| ||||| ||||||| || |||||||||||||| Sbjct: 346505 gttgacaaaatataatgagccggtggctggtgttcctgctgtccggcctgatgctaaaag 346564 Query: 1893 tcctcttggcatggagatagcttacacttatatttcaaagttgactcctgtttcttcatc 1952 |||||||||||||||||||||||||||||||||||| || |||||||| |||||| || Sbjct: 346565 tcctcttggcatggagatagcttacacttatatttcgaaattgactccgacttcttcgtc 346624 Query: 1953 tgcacaattggcaaaccttggtttggttgcaatcccaagactgagtgcgttctcaggcct 2012 |||||||| | ||||||||| ||||||||||| |||||| |||| || |||| |||||| Sbjct: 346625 ggcacaattaggaaaccttggcttggttgcaattccaagattgagcgctttcttaggcct 346684 Query: 2013 acggctgttgaacttatcagggaactcaat 2042 ||| |||||||||| || ||||| ||||| Sbjct: 346685 acgcttgttgaacttgtctgggaattcaat 346714 Score = 165 bits (83), Expect = 1e-36 Identities = 131/147 (89%) Strand = Plus / Plus Query: 2043 agtgcgcataactgcaggagctcttcctaaaggtcttcacatgttaagcctgtcgaagaa 2102 |||||| ||||||||||| |||||||| | |||||||||||||||||| |||| ||||| Sbjct: 346829 agtgcgaataactgcaggggctcttccaaggggtcttcacatgttaagcttgtcaaagaa 346888 Query: 2103 taatatctcaattattgaaggccttagagaactaacacgcttacgcttgctggacataag 2162 ||||||||||| ||||| |||||||||||| | |||||||||||||| |||||||| || Sbjct: 346889 taatatctcaacaattgagggccttagagaattgacacgcttacgcttactggacatcag 346948 Query: 2163 ctataataggatctctagaattggcca 2189 |||||||||||| || ||||||||||| Sbjct: 346949 ctataataggatatccagaattggcca 346975 Score = 107 bits (54), Expect = 2e-19 Identities = 220/274 (80%), Gaps = 6/274 (2%) Strand = Plus / Plus Query: 649 gattctcaggaacaaacagtgaagttcactgctggatcagcgagcccaagccagatggcc 708 ||||||||||| ||||||||||||| || ||||||||||| || |||| |||| || | Sbjct: 345273 gattctcaggatcaaacagtgaagtccaacgctggatcagcaagtccaaaccagttgaca 345332 Query: 709 ggtgaaaataaccattcagttgctaatgggcagtatgatattaactcatcatctcaccaa 768 | || |||| | |||||| || || |||||||||||| || | |||| ||||| ||| Sbjct: 345333 gatgtaaatgatcattcaaatgttagccggcagtatgatactagcccatcgtctcatcaa 345392 Query: 769 gaatgctggagatctgatgaatggagtagacatgcatgctctgatgatgacacggaggag 828 ||||||||||||||||| || | || ||| ||||||||||| ||||||| ||||| Sbjct: 345393 gaatgctggagatctgaagacttgaacagatatgcatgctct---gatgacagtaaggag 345449 Query: 829 aaagttgggcacctacagaagagccagtctcttggaaacatgcttcaagaggattgtgat 888 ||| |||||| ||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 345450 tc---tggccacctaaagaagagcctatctcttggaaacatgcttcacaaggatcatgat 345506 Query: 889 catcatggcagtgaaggtactgaatgtgatatta 922 |||||| ||||||||| ||||||||||||||| Sbjct: 345507 catcattttagtgaaggtgctgaatgtgatatta 345540 Score = 97.6 bits (49), Expect = 2e-16 Identities = 91/105 (86%) Strand = Plus / Plus Query: 1101 ttatgaccatagcaaatttccaaggtcacaatctgccatatttcagaataattctgatag 1160 ||||||||| | |||||||||||| ||||||||||| ||||||||||||||||| || | Sbjct: 345707 ttatgaccagaccaaatttccaagatcacaatctgctatatttcagaataattccaattg 345766 Query: 1161 tgatcgagaaggttctgttgattctgagagactaggcccccgttg 1205 || | ||||||||||| ||||||||||| |||||| || ||||| Sbjct: 345767 tggtacagaaggttctgctgattctgagatactagggcctcgttg 345811 Score = 83.8 bits (42), Expect = 3e-12 Identities = 96/114 (84%) Strand = Plus / Plus Query: 209 atgcaacctcctggaatagtctagttcctaaatccttcttccattctggcagatatcaag 268 ||||| ||| ||||||| |||||||||| |||| ||| |||| ||||||||||||||| Sbjct: 344673 atgcatccttctggaattatctagttccttaatctttcgtccagcctggcagatatcaag 344732 Query: 269 agatcattcaggtctcgcacctctgagtgggtgtggatttgcaacaattctgca 322 || ||| || |||||||||||| ||||||||||| |||||||| | |||||| Sbjct: 344733 aggtcaggcacatctcgcacctctaagtgggtgtgggtttgcaactactctgca 344786 Score = 71.9 bits (36), Expect = 1e-08 Identities = 39/40 (97%) Strand = Plus / Plus Query: 539 agagttgacttatggttaggtttttctgcttttcatcctc 578 ||||||||||||||||||||||||||||||| |||||||| Sbjct: 344993 agagttgacttatggttaggtttttctgcttctcatcctc 345032 Score = 61.9 bits (31), Expect = 1e-05 Identities = 40/43 (93%) Strand = Plus / Plus Query: 1282 aaatcaaatttgcatgtgctttgtgctggaccttcttcgccag 1324 |||||||||||| |||||| |||||||||||||||||| |||| Sbjct: 345933 aaatcaaatttggatgtgcattgtgctggaccttcttctccag 345975 Score = 56.0 bits (28), Expect = 8e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 1419 ttttgtgagggatgggatgctaagtcatgactactgggat 1458 |||||| ||||||||||||||||||||||| || |||||| Sbjct: 346073 ttttgttagggatgggatgctaagtcatgaatattgggat 346112 Score = 46.1 bits (23), Expect = 0.74 Identities = 47/55 (85%) Strand = Plus / Plus Query: 1533 catcaatggtgctttagatcaagagagggaagagaaattgtggaacagaaatagc 1587 |||||||| ||| ||||||||||||| |||| || |||||||||||| ||||| Sbjct: 346208 catcaatgaagctctagatcaagagagaaaagataacttgtggaacagagatagc 346262
>dbj|AP006186.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1317D11 Length = 135043 Score = 391 bits (197), Expect = e-104 Identities = 350/401 (87%) Strand = Plus / Plus Query: 2191 ggtttggcttcatgttctgctttgaaggagttatatctggctgggaacaagatcagtgag 2250 |||||||| || |||||| ||||||||||||| ||||||| ||| ||||||||||||||| Sbjct: 71615 ggtttggcgtcctgttcttctttgaaggagttgtatctgggtggtaacaagatcagtgag 71674 Query: 2251 gtagatggccttcaccgccttctgaagctaaaagttctggacttgcgccacaacaagatc 2310 |||||||| |||||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 71675 gtagatggtcttcaccgtcttctgaagctaaaggttctggacctgcgccacaacaagatc 71734 Query: 2311 tctacatccaagggccttggtcaactggctgcgaactataattccctcgaagccatcaac 2370 || ||||| ||||| |||||||| |||||||| ||||||| ||| || |||||| | ||| Sbjct: 71735 tccacatcgaaggggcttggtcagctggctgcaaactatagttctcttgaagccgtaaac 71794 Query: 2371 ctagatggcaacccagcacagaagaatgtaggtgaccagcacctgaagaagtacctgtta 2430 |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| || Sbjct: 71795 ctagatgggaacccagcgcagaagaatgtaggtgatgagcacctgaagaagtaccttgta 71854 Query: 2431 ggtctcttgccaaaccttgctgtgtacaacaagcagcctgtaagagcaactggctcaaaa 2490 |||||| |||||||||||| | | ||||||||||| ||| |||||||| ||||||||||| Sbjct: 71855 ggtctcctgccaaaccttggtttctacaacaagcatcctataagagcatctggctcaaaa 71914 Query: 2491 gaggtctcggaccgtcacacacgcaagatctcttcctcccatcgctctgaccgcagttcc 2550 ||||| |||||||| ||||| |||||||| ||||| |||||||| || || ||||| Sbjct: 71915 gaggtatcggaccggcacacccgcaagatttcttcttcccatcgttccgatcgcagcggt 71974 Query: 2551 agatcggaccgcaaatcttccaggttggtgcctggcacatc 2591 |||||||| || ||||| || ||||||||| || ||||||| Sbjct: 71975 agatcggatcgtaaatcctcgaggttggtggctagcacatc 72015 Score = 234 bits (118), Expect = 2e-57 Identities = 277/330 (83%) Strand = Plus / Plus Query: 1713 ggacccaaatgaacttagtccaagaacttacagcattaaaaggatcgaggattggatcag 1772 ||||||| |||||||| |||||||||| ||||||||||| || ||||||||||||| Sbjct: 70623 ggacccagatgaactttccccaagaacttttagcattaaaagaattgaggattggatcaa 70682 Query: 1773 ccaaattgatattgacagtgacatcattgtggaggagcagggagaaagttcaagttctgc 1832 |||||||||||||||| || || | |||| |||||||| ||||||||||||| || | Sbjct: 70683 ccaaattgatattgacgatggcacccttgtcgaggagcaaggagaaagttcaaactcggt 70742 Query: 1833 atcaacaaaatatagcgagtcggtgatcagtgtttctgctgtgcgccctgatgctaaaag 1892 | |||||||||| ||| ||||| ||||| ||||||| || |||||||||||||| Sbjct: 70743 gttgacaaaatataatgagccggtggctggtgttcctgctgtccggcctgatgctaaaag 70802 Query: 1893 tcctcttggcatggagatagcttacacttatatttcaaagttgactcctgtttcttcatc 1952 |||||||||||||||||||||||||||||||||||| || |||||||| |||||| || Sbjct: 70803 tcctcttggcatggagatagcttacacttatatttcgaaattgactccgacttcttcgtc 70862 Query: 1953 tgcacaattggcaaaccttggtttggttgcaatcccaagactgagtgcgttctcaggcct 2012 |||||||| | ||||||||| ||||||||||| |||||| |||| || |||| |||||| Sbjct: 70863 ggcacaattaggaaaccttggcttggttgcaattccaagattgagcgctttcttaggcct 70922 Query: 2013 acggctgttgaacttatcagggaactcaat 2042 ||| |||||||||| || ||||| ||||| Sbjct: 70923 acgcttgttgaacttgtctgggaattcaat 70952 Score = 165 bits (83), Expect = 1e-36 Identities = 131/147 (89%) Strand = Plus / Plus Query: 2043 agtgcgcataactgcaggagctcttcctaaaggtcttcacatgttaagcctgtcgaagaa 2102 |||||| ||||||||||| |||||||| | |||||||||||||||||| |||| ||||| Sbjct: 71067 agtgcgaataactgcaggggctcttccaaggggtcttcacatgttaagcttgtcaaagaa 71126 Query: 2103 taatatctcaattattgaaggccttagagaactaacacgcttacgcttgctggacataag 2162 ||||||||||| ||||| |||||||||||| | |||||||||||||| |||||||| || Sbjct: 71127 taatatctcaacaattgagggccttagagaattgacacgcttacgcttactggacatcag 71186 Query: 2163 ctataataggatctctagaattggcca 2189 |||||||||||| || ||||||||||| Sbjct: 71187 ctataataggatatccagaattggcca 71213 Score = 107 bits (54), Expect = 2e-19 Identities = 220/274 (80%), Gaps = 6/274 (2%) Strand = Plus / Plus Query: 649 gattctcaggaacaaacagtgaagttcactgctggatcagcgagcccaagccagatggcc 708 ||||||||||| ||||||||||||| || ||||||||||| || |||| |||| || | Sbjct: 69511 gattctcaggatcaaacagtgaagtccaacgctggatcagcaagtccaaaccagttgaca 69570 Query: 709 ggtgaaaataaccattcagttgctaatgggcagtatgatattaactcatcatctcaccaa 768 | || |||| | |||||| || || |||||||||||| || | |||| ||||| ||| Sbjct: 69571 gatgtaaatgatcattcaaatgttagccggcagtatgatactagcccatcgtctcatcaa 69630 Query: 769 gaatgctggagatctgatgaatggagtagacatgcatgctctgatgatgacacggaggag 828 ||||||||||||||||| || | || ||| ||||||||||| ||||||| ||||| Sbjct: 69631 gaatgctggagatctgaagacttgaacagatatgcatgctct---gatgacagtaaggag 69687 Query: 829 aaagttgggcacctacagaagagccagtctcttggaaacatgcttcaagaggattgtgat 888 ||| |||||| ||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 69688 tc---tggccacctaaagaagagcctatctcttggaaacatgcttcacaaggatcatgat 69744 Query: 889 catcatggcagtgaaggtactgaatgtgatatta 922 |||||| ||||||||| ||||||||||||||| Sbjct: 69745 catcattttagtgaaggtgctgaatgtgatatta 69778 Score = 97.6 bits (49), Expect = 2e-16 Identities = 91/105 (86%) Strand = Plus / Plus Query: 1101 ttatgaccatagcaaatttccaaggtcacaatctgccatatttcagaataattctgatag 1160 ||||||||| | |||||||||||| ||||||||||| ||||||||||||||||| || | Sbjct: 69945 ttatgaccagaccaaatttccaagatcacaatctgctatatttcagaataattccaattg 70004 Query: 1161 tgatcgagaaggttctgttgattctgagagactaggcccccgttg 1205 || | ||||||||||| ||||||||||| |||||| || ||||| Sbjct: 70005 tggtacagaaggttctgctgattctgagatactagggcctcgttg 70049 Score = 83.8 bits (42), Expect = 3e-12 Identities = 96/114 (84%) Strand = Plus / Plus Query: 209 atgcaacctcctggaatagtctagttcctaaatccttcttccattctggcagatatcaag 268 ||||| ||| ||||||| |||||||||| |||| ||| |||| ||||||||||||||| Sbjct: 68911 atgcatccttctggaattatctagttccttaatctttcgtccagcctggcagatatcaag 68970 Query: 269 agatcattcaggtctcgcacctctgagtgggtgtggatttgcaacaattctgca 322 || ||| || |||||||||||| ||||||||||| |||||||| | |||||| Sbjct: 68971 aggtcaggcacatctcgcacctctaagtgggtgtgggtttgcaactactctgca 69024 Score = 71.9 bits (36), Expect = 1e-08 Identities = 39/40 (97%) Strand = Plus / Plus Query: 539 agagttgacttatggttaggtttttctgcttttcatcctc 578 ||||||||||||||||||||||||||||||| |||||||| Sbjct: 69231 agagttgacttatggttaggtttttctgcttctcatcctc 69270 Score = 61.9 bits (31), Expect = 1e-05 Identities = 40/43 (93%) Strand = Plus / Plus Query: 1282 aaatcaaatttgcatgtgctttgtgctggaccttcttcgccag 1324 |||||||||||| |||||| |||||||||||||||||| |||| Sbjct: 70171 aaatcaaatttggatgtgcattgtgctggaccttcttctccag 70213 Score = 56.0 bits (28), Expect = 8e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 1419 ttttgtgagggatgggatgctaagtcatgactactgggat 1458 |||||| ||||||||||||||||||||||| || |||||| Sbjct: 70311 ttttgttagggatgggatgctaagtcatgaatattgggat 70350 Score = 46.1 bits (23), Expect = 0.74 Identities = 47/55 (85%) Strand = Plus / Plus Query: 1533 catcaatggtgctttagatcaagagagggaagagaaattgtggaacagaaatagc 1587 |||||||| ||| ||||||||||||| |||| || |||||||||||| ||||| Sbjct: 70446 catcaatgaagctctagatcaagagagaaaagataacttgtggaacagagatagc 70500
>dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0617C02 Length = 135605 Score = 391 bits (197), Expect = e-104 Identities = 350/401 (87%) Strand = Plus / Plus Query: 2191 ggtttggcttcatgttctgctttgaaggagttatatctggctgggaacaagatcagtgag 2250 |||||||| || |||||| ||||||||||||| ||||||| ||| ||||||||||||||| Sbjct: 99376 ggtttggcgtcctgttcttctttgaaggagttgtatctgggtggtaacaagatcagtgag 99435 Query: 2251 gtagatggccttcaccgccttctgaagctaaaagttctggacttgcgccacaacaagatc 2310 |||||||| |||||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 99436 gtagatggtcttcaccgtcttctgaagctaaaggttctggacctgcgccacaacaagatc 99495 Query: 2311 tctacatccaagggccttggtcaactggctgcgaactataattccctcgaagccatcaac 2370 || ||||| ||||| |||||||| |||||||| ||||||| ||| || |||||| | ||| Sbjct: 99496 tccacatcgaaggggcttggtcagctggctgcaaactatagttctcttgaagccgtaaac 99555 Query: 2371 ctagatggcaacccagcacagaagaatgtaggtgaccagcacctgaagaagtacctgtta 2430 |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| || Sbjct: 99556 ctagatgggaacccagcgcagaagaatgtaggtgatgagcacctgaagaagtaccttgta 99615 Query: 2431 ggtctcttgccaaaccttgctgtgtacaacaagcagcctgtaagagcaactggctcaaaa 2490 |||||| |||||||||||| | | ||||||||||| ||| |||||||| ||||||||||| Sbjct: 99616 ggtctcctgccaaaccttggtttctacaacaagcatcctataagagcatctggctcaaaa 99675 Query: 2491 gaggtctcggaccgtcacacacgcaagatctcttcctcccatcgctctgaccgcagttcc 2550 ||||| |||||||| ||||| |||||||| ||||| |||||||| || || ||||| Sbjct: 99676 gaggtatcggaccggcacacccgcaagatttcttcttcccatcgttccgatcgcagcggt 99735 Query: 2551 agatcggaccgcaaatcttccaggttggtgcctggcacatc 2591 |||||||| || ||||| || ||||||||| || ||||||| Sbjct: 99736 agatcggatcgtaaatcctcgaggttggtggctagcacatc 99776 Score = 234 bits (118), Expect = 2e-57 Identities = 277/330 (83%) Strand = Plus / Plus Query: 1713 ggacccaaatgaacttagtccaagaacttacagcattaaaaggatcgaggattggatcag 1772 ||||||| |||||||| |||||||||| ||||||||||| || ||||||||||||| Sbjct: 98384 ggacccagatgaactttccccaagaacttttagcattaaaagaattgaggattggatcaa 98443 Query: 1773 ccaaattgatattgacagtgacatcattgtggaggagcagggagaaagttcaagttctgc 1832 |||||||||||||||| || || | |||| |||||||| ||||||||||||| || | Sbjct: 98444 ccaaattgatattgacgatggcacccttgtcgaggagcaaggagaaagttcaaactcggt 98503 Query: 1833 atcaacaaaatatagcgagtcggtgatcagtgtttctgctgtgcgccctgatgctaaaag 1892 | |||||||||| ||| ||||| ||||| ||||||| || |||||||||||||| Sbjct: 98504 gttgacaaaatataatgagccggtggctggtgttcctgctgtccggcctgatgctaaaag 98563 Query: 1893 tcctcttggcatggagatagcttacacttatatttcaaagttgactcctgtttcttcatc 1952 |||||||||||||||||||||||||||||||||||| || |||||||| |||||| || Sbjct: 98564 tcctcttggcatggagatagcttacacttatatttcgaaattgactccgacttcttcgtc 98623 Query: 1953 tgcacaattggcaaaccttggtttggttgcaatcccaagactgagtgcgttctcaggcct 2012 |||||||| | ||||||||| ||||||||||| |||||| |||| || |||| |||||| Sbjct: 98624 ggcacaattaggaaaccttggcttggttgcaattccaagattgagcgctttcttaggcct 98683 Query: 2013 acggctgttgaacttatcagggaactcaat 2042 ||| |||||||||| || ||||| ||||| Sbjct: 98684 acgcttgttgaacttgtctgggaattcaat 98713 Score = 165 bits (83), Expect = 1e-36 Identities = 131/147 (89%) Strand = Plus / Plus Query: 2043 agtgcgcataactgcaggagctcttcctaaaggtcttcacatgttaagcctgtcgaagaa 2102 |||||| ||||||||||| |||||||| | |||||||||||||||||| |||| ||||| Sbjct: 98828 agtgcgaataactgcaggggctcttccaaggggtcttcacatgttaagcttgtcaaagaa 98887 Query: 2103 taatatctcaattattgaaggccttagagaactaacacgcttacgcttgctggacataag 2162 ||||||||||| ||||| |||||||||||| | |||||||||||||| |||||||| || Sbjct: 98888 taatatctcaacaattgagggccttagagaattgacacgcttacgcttactggacatcag 98947 Query: 2163 ctataataggatctctagaattggcca 2189 |||||||||||| || ||||||||||| Sbjct: 98948 ctataataggatatccagaattggcca 98974 Score = 107 bits (54), Expect = 2e-19 Identities = 220/274 (80%), Gaps = 6/274 (2%) Strand = Plus / Plus Query: 649 gattctcaggaacaaacagtgaagttcactgctggatcagcgagcccaagccagatggcc 708 ||||||||||| ||||||||||||| || ||||||||||| || |||| |||| || | Sbjct: 97272 gattctcaggatcaaacagtgaagtccaacgctggatcagcaagtccaaaccagttgaca 97331 Query: 709 ggtgaaaataaccattcagttgctaatgggcagtatgatattaactcatcatctcaccaa 768 | || |||| | |||||| || || |||||||||||| || | |||| ||||| ||| Sbjct: 97332 gatgtaaatgatcattcaaatgttagccggcagtatgatactagcccatcgtctcatcaa 97391 Query: 769 gaatgctggagatctgatgaatggagtagacatgcatgctctgatgatgacacggaggag 828 ||||||||||||||||| || | || ||| ||||||||||| ||||||| ||||| Sbjct: 97392 gaatgctggagatctgaagacttgaacagatatgcatgctct---gatgacagtaaggag 97448 Query: 829 aaagttgggcacctacagaagagccagtctcttggaaacatgcttcaagaggattgtgat 888 ||| |||||| ||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 97449 tc---tggccacctaaagaagagcctatctcttggaaacatgcttcacaaggatcatgat 97505 Query: 889 catcatggcagtgaaggtactgaatgtgatatta 922 |||||| ||||||||| ||||||||||||||| Sbjct: 97506 catcattttagtgaaggtgctgaatgtgatatta 97539 Score = 97.6 bits (49), Expect = 2e-16 Identities = 91/105 (86%) Strand = Plus / Plus Query: 1101 ttatgaccatagcaaatttccaaggtcacaatctgccatatttcagaataattctgatag 1160 ||||||||| | |||||||||||| ||||||||||| ||||||||||||||||| || | Sbjct: 97706 ttatgaccagaccaaatttccaagatcacaatctgctatatttcagaataattccaattg 97765 Query: 1161 tgatcgagaaggttctgttgattctgagagactaggcccccgttg 1205 || | ||||||||||| ||||||||||| |||||| || ||||| Sbjct: 97766 tggtacagaaggttctgctgattctgagatactagggcctcgttg 97810 Score = 83.8 bits (42), Expect = 3e-12 Identities = 96/114 (84%) Strand = Plus / Plus Query: 209 atgcaacctcctggaatagtctagttcctaaatccttcttccattctggcagatatcaag 268 ||||| ||| ||||||| |||||||||| |||| ||| |||| ||||||||||||||| Sbjct: 96672 atgcatccttctggaattatctagttccttaatctttcgtccagcctggcagatatcaag 96731 Query: 269 agatcattcaggtctcgcacctctgagtgggtgtggatttgcaacaattctgca 322 || ||| || |||||||||||| ||||||||||| |||||||| | |||||| Sbjct: 96732 aggtcaggcacatctcgcacctctaagtgggtgtgggtttgcaactactctgca 96785 Score = 71.9 bits (36), Expect = 1e-08 Identities = 39/40 (97%) Strand = Plus / Plus Query: 539 agagttgacttatggttaggtttttctgcttttcatcctc 578 ||||||||||||||||||||||||||||||| |||||||| Sbjct: 96992 agagttgacttatggttaggtttttctgcttctcatcctc 97031 Score = 61.9 bits (31), Expect = 1e-05 Identities = 40/43 (93%) Strand = Plus / Plus Query: 1282 aaatcaaatttgcatgtgctttgtgctggaccttcttcgccag 1324 |||||||||||| |||||| |||||||||||||||||| |||| Sbjct: 97932 aaatcaaatttggatgtgcattgtgctggaccttcttctccag 97974 Score = 56.0 bits (28), Expect = 8e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 1419 ttttgtgagggatgggatgctaagtcatgactactgggat 1458 |||||| ||||||||||||||||||||||| || |||||| Sbjct: 98072 ttttgttagggatgggatgctaagtcatgaatattgggat 98111 Score = 46.1 bits (23), Expect = 0.74 Identities = 47/55 (85%) Strand = Plus / Plus Query: 1533 catcaatggtgctttagatcaagagagggaagagaaattgtggaacagaaatagc 1587 |||||||| ||| ||||||||||||| |||| || |||||||||||| ||||| Sbjct: 98207 catcaatgaagctctagatcaagagagaaaagataacttgtggaacagagatagc 98261
>ref|NM_001062506.1| Oryza sativa (japonica cultivar-group) Os05g0501600 (Os05g0501600) mRNA, complete cds Length = 2801 Score = 50.1 bits (25), Expect = 0.048 Identities = 91/113 (80%) Strand = Plus / Plus Query: 2014 cggctgttgaacttatcagggaactcaatagtgcgcataactgcaggagctcttcctaaa 2073 |||||| ||||||| |||||||||||||| | | |||||| ||||||| ||||| ||| Sbjct: 1721 cggctgctgaacttggcagggaactcaataataaggataacttcaggagcacttccgaaa 1780 Query: 2074 ggtcttcacatgttaagcctgtcgaagaataatatctcaattattgaaggcct 2126 || || | |||||||| ||||| | ||||| || |||| ||||||||||| Sbjct: 1781 ggactccgcatgttaaatctgtcaagaaataacatatcaaccattgaaggcct 1833
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 50.1 bits (25), Expect = 0.048 Identities = 31/33 (93%) Strand = Plus / Minus Query: 30 caacccctcttcctcctccctcatctctctctt 62 |||||| |||||||||||||| ||||||||||| Sbjct: 18654851 caacccttcttcctcctcccttatctctctctt 18654819
>dbj|AP003276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0516D04 Length = 140491 Score = 50.1 bits (25), Expect = 0.048 Identities = 31/33 (93%) Strand = Plus / Minus Query: 30 caacccctcttcctcctccctcatctctctctt 62 |||||| |||||||||||||| ||||||||||| Sbjct: 78124 caacccttcttcctcctcccttatctctctctt 78092
>dbj|AP004611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1005_B10 Length = 142680 Score = 50.1 bits (25), Expect = 0.048 Identities = 31/33 (93%) Strand = Plus / Minus Query: 30 caacccctcttcctcctccctcatctctctctt 62 |||||| |||||||||||||| ||||||||||| Sbjct: 42297 caacccttcttcctcctcccttatctctctctt 42265
>dbj|AK100270.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068C13, full insert sequence Length = 2803 Score = 50.1 bits (25), Expect = 0.048 Identities = 91/113 (80%) Strand = Plus / Plus Query: 2014 cggctgttgaacttatcagggaactcaatagtgcgcataactgcaggagctcttcctaaa 2073 |||||| ||||||| |||||||||||||| | | |||||| ||||||| ||||| ||| Sbjct: 1721 cggctgctgaacttggcagggaactcaataataaggataacttcaggagcacttccgaaa 1780 Query: 2074 ggtcttcacatgttaagcctgtcgaagaataatatctcaattattgaaggcct 2126 || || | |||||||| ||||| | ||||| || |||| ||||||||||| Sbjct: 1781 ggactccgcatgttaaatctgtcaagaaataacatatcaaccattgaaggcct 1833
>gb|AC126929.3| Mus musculus BAC clone RP24-465A20 from chromosome 17, complete sequence Length = 168712 Score = 48.1 bits (24), Expect = 0.19 Identities = 24/24 (100%) Strand = Plus / Plus Query: 653 ctcaggaacaaacagtgaagttca 676 |||||||||||||||||||||||| Sbjct: 37965 ctcaggaacaaacagtgaagttca 37988
>gb|AC126055.4| Mus musculus BAC clone RP23-368O6 from chromosome 16, complete sequence Length = 197096 Score = 46.1 bits (23), Expect = 0.74 Identities = 23/23 (100%) Strand = Plus / Minus Query: 762 tcaccaagaatgctggagatctg 784 ||||||||||||||||||||||| Sbjct: 108290 tcaccaagaatgctggagatctg 108268
>emb|BX908782.7| Zebrafish DNA sequence from clone DKEY-6E4 in linkage group 2, complete sequence Length = 196309 Score = 46.1 bits (23), Expect = 0.74 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1033 gacctgatcagtcatggtgtttatgaa 1059 ||||||||||||||| ||||||||||| Sbjct: 28379 gacctgatcagtcatagtgtttatgaa 28405
>gb|AC007785.1|AC007785 Homo sapiens chromosome 19, BAC 282485 (CIT-B-344H19), complete sequence Length = 166500 Score = 46.1 bits (23), Expect = 0.74 Identities = 26/27 (96%) Strand = Plus / Plus Query: 36 ctcttcctcctccctcatctctctctt 62 |||||||||||||||| |||||||||| Sbjct: 39548 ctcttcctcctccctcctctctctctt 39574
>gb|AC192577.2| Pan troglodytes BAC clone CH251-320G5 from chromosome x, complete sequence Length = 187837 Score = 44.1 bits (22), Expect = 2.9 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1533 catcaatggtgctttagatcaagagaggga 1562 ||||||||||| |||| ||||||||||||| Sbjct: 101344 catcaatggtgttttaaatcaagagaggga 101315
>emb|CU062506.1| Wallaby DNA sequence from clone MEKBa-183I7, complete sequence Length = 170000 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1939 cctgtttcttcatctgcacaat 1960 |||||||||||||||||||||| Sbjct: 40047 cctgtttcttcatctgcacaat 40026
>ref|NW_001091934.1| Theileria annulata strain Ankara clone C6 Length = 1898942 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2812 ttaagtttgtaaaataattaag 2833 |||||||||||||||||||||| Sbjct: 1321839 ttaagtttgtaaaataattaag 1321860 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2812 ttaagtttgtaaaataattaag 2833 |||||||||||||||||||||| Sbjct: 1334467 ttaagtttgtaaaataattaag 1334488
>gb|AC187108.2| Gallus gallus BAC clone CH261-103G12 from chromosome z, complete sequence Length = 238583 Score = 44.1 bits (22), Expect = 2.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 173 gagagcagccgagaggagaaggattt 198 ||||||||||| |||||||||||||| Sbjct: 194486 gagagcagccgtgaggagaaggattt 194461
>emb|AL590139.11| Human DNA sequence from clone RP11-349N19 on chromosome X Contains the 3' end of the GRIA3 gene for glutamate receptor ionotrophic AMPA 3 and a H3 histone, family 3B (H3.3B) (H3F3B) pseudogene, complete sequence Length = 75359 Score = 44.1 bits (22), Expect = 2.9 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1533 catcaatggtgctttagatcaagagaggga 1562 ||||||||||| |||| ||||||||||||| Sbjct: 25956 catcaatggtgttttaaatcaagagaggga 25927
>gb|AY954970.1| Staphylococcus phage Twort, complete genome Length = 130706 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 733 aatgggcagtatgatattaact 754 |||||||||||||||||||||| Sbjct: 64099 aatgggcagtatgatattaact 64120
>gb|AC113058.6| Mus musculus chromosome 6, clone RP23-253C24, complete sequence Length = 248761 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 cctcttcctcctccctcatctc 56 |||||||||||||||||||||| Sbjct: 53152 cctcttcctcctccctcatctc 53173 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 572,637,324 Number of extensions: 30234291 Number of successful extensions: 162690 Number of sequences better than 10.0: 21 Number of HSP's gapped: 162685 Number of HSP's successfully gapped: 78 Length of query: 3026 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 3003 Effective length of database: 18,503,978,556 Effective search space: 55567447603668 Effective search space used: 55567447603668 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
