ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf98a15 |
|---|---|
| Clone Library Name | barley_pub |
>Q5R456:CA121_PONPY UPF0326 protein C1orf121 homolog - Pongo pygmaeus (Orangutan)| Length = 194 Score = 73.6 bits (179), Expect = 1e-12 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 4/140 (2%) Frame = +2 Query: 212 VVLHVYDVTNSDSEKTNNTILQINRIFKDRIGLGGIFHSAVQVYGEEEWSFGFCENGSGV 391 VVL+VYD+ + + IG+G +FHS ++VYG E G SG+ Sbjct: 7 VVLNVYDMYWMNE-------------YTSSIGIG-VFHSGIEVYGREFAYGGHPYPFSGI 52 Query: 392 FSCPVSK----NPMYTYRERIVLGETECTIATVNRILRELSRDWPGHSYDLLSRNCNHFC 559 F + ++E +VLG T+ + +I+ EL +++ G++Y L+ +NCNHF Sbjct: 53 FEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFS 112 Query: 560 DVLCDRLGVPKLPGWVNRFA 619 L + L ++P W+NR A Sbjct: 113 SALSEILCGKEIPRWINRLA 132
>Q9D291:CA121_MOUSE UPF0326 protein C1orf121 homolog - Mus musculus (Mouse)| Length = 194 Score = 73.6 bits (179), Expect = 1e-12 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 4/140 (2%) Frame = +2 Query: 212 VVLHVYDVTNSDSEKTNNTILQINRIFKDRIGLGGIFHSAVQVYGEEEWSFGFCENGSGV 391 VVL+VYD+ + + IG+G +FHS ++VYG E G SG+ Sbjct: 7 VVLNVYDMYWMNE-------------YTSSIGIG-VFHSGIEVYGREFAYGGHPYPFSGI 52 Query: 392 FSCPVSK----NPMYTYRERIVLGETECTIATVNRILRELSRDWPGHSYDLLSRNCNHFC 559 F + ++E +VLG T+ + +I+ EL +++ G++Y L+ +NCNHF Sbjct: 53 FEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFS 112 Query: 560 DVLCDRLGVPKLPGWVNRFA 619 L + L ++P W+NR A Sbjct: 113 SALSEILCGKEIPRWINRLA 132
>Q9BSY9:CA121_HUMAN UPF0326 protein C1orf121 - Homo sapiens (Human)| Length = 194 Score = 73.6 bits (179), Expect = 1e-12 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 4/140 (2%) Frame = +2 Query: 212 VVLHVYDVTNSDSEKTNNTILQINRIFKDRIGLGGIFHSAVQVYGEEEWSFGFCENGSGV 391 VVL+VYD+ + + IG+G +FHS ++VYG E G SG+ Sbjct: 7 VVLNVYDMYWMNE-------------YTSSIGIG-VFHSGIEVYGREFAYGGHPYPFSGI 52 Query: 392 FSCPVSK----NPMYTYRERIVLGETECTIATVNRILRELSRDWPGHSYDLLSRNCNHFC 559 F + ++E +VLG T+ + +I+ EL +++ G++Y L+ +NCNHF Sbjct: 53 FEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFS 112 Query: 560 DVLCDRLGVPKLPGWVNRFA 619 L + L ++P W+NR A Sbjct: 113 SALSEILCGKEIPRWINRLA 132
>Q93VG8:U326_ARATH UPF0326 protein At4g17486 - Arabidopsis thaliana (Mouse-ear cress)| Length = 224 Score = 72.8 bits (177), Expect = 2e-12 Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 1/106 (0%) Frame = +2 Query: 314 GIFHSAVQVYGEEEWSFGFCENG-SGVFSCPVSKNPMYTYRERIVLGETECTIATVNRIL 490 GIFHS ++ + E + +G E SGV+ P + +R ++LG T + + + Sbjct: 48 GIFHSGIEAHNLE-YCYGAHEYPTSGVYEVEPRNCPGFIFRRSVLLGTTSMSRSDFRSYM 106 Query: 491 RELSRDWPGHSYDLLSRNCNHFCDVLCDRLGVPKLPGWVNRFANAG 628 +LSR + G +Y L+++NCNHF + +C +L +PGW+NR A G Sbjct: 107 EKLSRKYHGDTYHLIAKNCNHFTEEVCLQLTGKPIPGWINRLARVG 152
>Q8X1T0:HAG1_SCHPO UPF0326 protein hag1 - Schizosaccharomyces pombe (Fission yeast)| Length = 201 Score = 60.5 bits (145), Expect = 1e-08 Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 4/134 (2%) Frame = +2 Query: 314 GIFHSAVQVYGEEEWSFGFCE--NGSGVFSCPVSKNPMYTYRERIVLGETECTIAT--VN 481 GI+H+ + + G+E ++FG E +GVF+ + + P+ R R + CT+ V+ Sbjct: 26 GIYHTGLVLEGKE-YAFGAHEIPGSTGVFAT-MPRPPLEGCRWRCSIALPNCTLPKPDVD 83 Query: 482 RILRELSRDWPGHSYDLLSRNCNHFCDVLCDRLGVPKLPGWVNRFANAGDTAVVVAENTA 661 RIL LS+++ G SY LL RNCNHF + L +P ++NR + G A N Sbjct: 84 RILIRLSQEFTGLSYSLLERNCNHFTNAAAIELTGSPIPSFLNRISRIG-LAFPTITNAL 142 Query: 662 VKFRQAKTEIVNAS 703 ++ Q T V+ S Sbjct: 143 LQHGQKNTSDVDDS 156
>Q8MTI2:BSL1_TRIVA Putative surface protein bspA-like - Trichomonas vaginalis| Length = 625 Score = 33.9 bits (76), Expect = 1.2 Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 5/109 (4%) Frame = +2 Query: 605 VNRFANAGDTAVVVAENTAVKFRQAKTEIVNASRVAYRFMAGLTSKNQASQESPGDQNR- 781 +N+F G + EN +K ++ E++ +++ + + G+T ++ S+E+P Sbjct: 395 INKFTYLGTDKL---ENDFLKNAKSCEEVITSTKYSDNEIGGMTITHKQSEENPNQPGEN 451 Query: 782 ----GGSPTFQGAWFKNVVSAGAKPSTSGSTPSQEADDAPTLQGQKSAE 916 G +P G +N G PS G PSQ ++ P G+ ++ Sbjct: 452 PNQPGENPNQPG---ENPNQPGENPSQPGENPSQPGEN-PNQPGENPSQ 496
>Q5NIG3:MSBA_FRATT Lipid A export ATP-binding/permease protein msbA - Francisella| tularensis subsp. tularensis Length = 609 Score = 31.2 bits (69), Expect = 7.6 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +1 Query: 793 YFPGSMVQECCFSWGKAVHKRVNSLTRS**RTHLAGPEISR---TIDKVVAVAVTADLPT 963 YF GS+ Q+ + + K ++KR+ L S H G ISR +D+V+ TA + Sbjct: 112 YFIGSLGQKVVYKFRKDIYKRLMDLPASFFDKHSTGQIISRLLYNVDQVIEATSTAIITV 171 Query: 964 V 966 V Sbjct: 172 V 172
>Q14JW6:MSBA_FRAT1 Lipid A export ATP-binding/permease protein msbA - Francisella| tularensis subsp. tularensis (strain FSC 198) Length = 609 Score = 31.2 bits (69), Expect = 7.6 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +1 Query: 793 YFPGSMVQECCFSWGKAVHKRVNSLTRS**RTHLAGPEISR---TIDKVVAVAVTADLPT 963 YF GS+ Q+ + + K ++KR+ L S H G ISR +D+V+ TA + Sbjct: 112 YFIGSLGQKVVYKFRKDIYKRLMDLPASFFDKHSTGQIISRLLYNVDQVIEATSTAIITV 171 Query: 964 V 966 V Sbjct: 172 V 172
>Q86VB7:C163A_HUMAN Scavenger receptor cysteine-rich type 1 protein M130 precursor -| Homo sapiens (Human) Length = 1156 Score = 30.8 bits (68), Expect = 9.9 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 8/72 (11%) Frame = +2 Query: 437 RIVLGETECTIATVNRILRELSRDWP-----GHSYDLLSRNCNHFCDVLCDRLGVP---K 592 R+V GE +C+ R+ ++ +W G S + +S V+C++LG P K Sbjct: 52 RLVDGENKCS----GRVEVKVQEEWGTVCNNGWSMEAVS--------VICNQLGCPTAIK 99 Query: 593 LPGWVNRFANAG 628 PGW N A +G Sbjct: 100 APGWANSSAGSG 111 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 153,547,619 Number of extensions: 3400032 Number of successful extensions: 11043 Number of sequences better than 10.0: 9 Number of HSP's gapped: 11028 Number of HSP's successfully gapped: 9 Length of query: 354 Length of database: 100,686,439 Length adjustment: 114 Effective length of query: 240 Effective length of database: 69,416,809 Effective search space: 16660034160 Effective search space used: 16660034160 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
