ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf95n19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK108666:Os02g0298200 29 1.1
2AK109819:Os12g0190100 28 1.9
3AK063571:Os03g0227800 27 4.1
4Os02g0211200:Os02g0211200 27 4.2
5Os01g0359800:Os01g0359800 27 4.2
6Os03g0793600:Os03g0793600 27 5.4
7AK119211:Os03g0638200 27 7.1
8AK108401:Os07g0693500 27 7.1
9AK107718:Os09g0243200 27 7.1
10AK064423:Os10g0200000 27 7.1
11Os01g0743100:Os01g0743100 26 9.1
12AK122171:Os12g0108500 26 9.1
13Os12g0235700:Os12g0235700 26 9.3
14Os12g0161900:Os12g0161900 26 9.3
15AK102947:Os03g0587100 26 9.3

>AK108666:Os02g0298200 |
          Length = 591
 Score = 29.3 bits (64), Expect = 1.1
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
 Frame = -1

Query: 235 LQSVRVLKLSCASKSCRPQE-----EQLVAARLGVSTCNSLPQAVSRSIVPP 95
           L++   ++  CAS+SCR Q+     +Q   +R  + + +SLP  VS ++  P
Sbjct: 6   LKATHSIRRRCASRSCRHQKAGRRRQQCGLSRRPLCSASSLPPLVSAAMASP 57



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>AK109819:Os12g0190100 |
          Length = 495

 Score = 28.5 bits (62), Expect = 1.9
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 293 RTGNKMQLPPFSHSPAVEQRSKFL*SPGYSIHRIVSTSRR 412
           R  +++ LPP  H PA E   +   S GY  H  V+ + R
Sbjct: 48  RQVHRVGLPPRDHPPAQEPNEQLWGSDGYGSHACVTPTSR 87



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>AK063571:Os03g0227800 |
          Length = 120

 Score = 27.3 bits (59), Expect = 4.1
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
 Frame = +3

Query: 6   SSLPWPCTCEGS--SIANACC*CSEEDSMS--WNGGTILRL 116
           S L W C+  G   SI  +CC CS   S S  W+   +L +
Sbjct: 33  SDLGWTCSSFGGHGSIGGSCCCCSSSRSASQIWSRSDLLEV 73



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>Os02g0211200:Os02g0211200 |
          Length = 1131

 Score = 27.3 bits (59), Expect = 4.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 95  WGHNTPTHCLWQRVTCTNTES 157
           W + +   C WQ V+C NT++
Sbjct: 56  WSNTSQNFCNWQGVSCNNTQT 76



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>Os01g0359800:Os01g0359800 |
          Length = 1285

 Score = 27.3 bits (59), Expect = 4.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -1

Query: 316 QLHLVACPFIRLIPMDGQAPQSVVLHL 236
           ++HLV CP  + IP   + P   VLHL
Sbjct: 785 EIHLVDCPLCKEIPKFWKLPALEVLHL 811



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>Os03g0793600:Os03g0793600 |
          Length = 513

 Score = 26.9 bits (58), Expect = 5.4
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 270 MDRHHSLWCYICCNL 226
           M  HH+ +C+ICC+L
Sbjct: 360 MSLHHTSFCFICCHL 374



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>AK119211:Os03g0638200 |
          Length = 480

 Score = 26.6 bits (57), Expect = 7.1
 Identities = 20/69 (28%), Positives = 27/69 (39%)
 Frame = -1

Query: 322 RWQLHLVACPFIRLIPMDGQAPQSVVLHLLQSVRVLKLSCASKSCRPQEEQLVAARLGVS 143
           RW L L A P   LIP  G  P+S            +  C     R  +  LV  R+ ++
Sbjct: 174 RWLLALTALPCSLLIPFFGTTPESP-----------RYLCGQN--RTSDAMLVLERIAIT 220

Query: 142 TCNSLPQAV 116
              +LP  V
Sbjct: 221 NQAALPPGV 229



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>AK108401:Os07g0693500 |
          Length = 105

 Score = 26.6 bits (57), Expect = 7.1
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = -1

Query: 166 VAARLGVSTCN---SLPQAVSRSIVPPFQLIESSSLHQQHAFAIDDPSHVHGHGKEDP 2
           V AR+G+       +LPQ V R +    +L +   +H+ HA     P H   H  + P
Sbjct: 40  VGARVGLLLRGQQLALPQRVHRRVRVLAKLRQRRDVHESHAHPPHRPQHTARHPVQPP 97



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>AK107718:Os09g0243200 |
          Length = 155

 Score = 26.6 bits (57), Expect = 7.1
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -1

Query: 103 VPPFQLIESSSLHQQHAFAIDDPSHVHGHGKEDP 2
           V P   ++ +    +H F +DD + VHGH    P
Sbjct: 20  VHPLVAVDDAGADDEH-FPVDDAAAVHGHASPPP 52



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>AK064423:Os10g0200000 |
          Length = 772

 Score = 26.6 bits (57), Expect = 7.1
 Identities = 24/114 (21%), Positives = 50/114 (43%)
 Frame = -1

Query: 397 DYSMNTVSGRSEELRTLLNCRRMRERWQLHLVACPFIRLIPMDGQAPQSVVLHLLQSVRV 218
           D  M   +GR  + R +L+   + +   LH++ CPF +L           +   + + R 
Sbjct: 539 DNQMLMYAGRQLDDRQILSHFGLSDDQILHVLICPFEKL----------RIFVNISNRRT 588

Query: 217 LKLSCASKSCRPQEEQLVAARLGVSTCNSLPQAVSRSIVPPFQLIESSSLHQQH 56
           ++L   S       + ++ A LG   C  L    + S+    +L+++ +L +Q+
Sbjct: 589 VRLDVESWYTVADVKVMIEALLGFPACTQLLMWTNPSV--DIELMDTETLKEQN 640



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>Os01g0743100:Os01g0743100 |
          Length = 378

 Score = 26.2 bits (56), Expect = 9.1
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +3

Query: 153 SRAATNCSSWGRHDLDAQLSLRTRTDCSKCNTTDCGAC 266
           S A T C S  R    A+   R+R  CS+  T D G C
Sbjct: 313 SAARTRCQSAPRQRQAAEAPARSRRSCSR-TTQDSGFC 349



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>AK122171:Os12g0108500 |
          Length = 677

 Score = 26.2 bits (56), Expect = 9.1
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 210 SLRTRTDCSKCNTTDCGACPSIGINLMNGQATRC 311
           SLR+ + C K NT +   CP +    ++  AT C
Sbjct: 511 SLRSLSKCIKLNTLEIRGCPMVSSAGLSEIATGC 544



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>Os12g0235700:Os12g0235700 |
          Length = 785

 Score = 26.2 bits (56), Expect = 9.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 95  WGHNTPTHCLWQRVTCTNTESS 160
           W  + P  C W  VTC+N  ++
Sbjct: 51  WSESDPDPCRWPGVTCSNVTAA 72



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>Os12g0161900:Os12g0161900 |
          Length = 826

 Score = 26.2 bits (56), Expect = 9.3
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -1

Query: 373 GRSEELRTLLNCRRMRERWQLHLVACPFIRLIPMDGQAPQSVVLH 239
           G  + +   L   R +ER+QLH  A   I L  M    P+S  LH
Sbjct: 102 GNDDYVSDDLMLERNKERFQLHDEANNDIHLKSMSANVPRSSTLH 146



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>AK102947:Os03g0587100 |
          Length = 335

 Score = 26.2 bits (56), Expect = 9.3
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = -1

Query: 283 LIPMDGQAPQSVVLHLLQSVRVLKLSCASKSCRPQEEQLVAA 158
           L P DG++P    LH        +L C S   RP  E+ VAA
Sbjct: 24  LTPSDGRSPSLSPLHPPWPAAP-RLVCRSSGARPPRERAVAA 64


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 12,967,534
Number of extensions: 294838
Number of successful extensions: 928
Number of sequences better than 10.0: 15
Number of HSP's gapped: 927
Number of HSP's successfully gapped: 15
Length of query: 145
Length of database: 15,399,855
Length adjustment: 91
Effective length of query: 54
Effective length of database: 11,756,124
Effective search space: 634830696
Effective search space used: 634830696
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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