Clone Information

BLAST Search Result

Clone Name	FLbaf97p19
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|NM_001057655.1\| Oryza sativa (japonica cultivar-group) Os03g...	228	4e-56
2	dbj\|AK068261.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	228	4e-56
3	gb\|AC146936.4\| Oryza sativa (japonica cultivar-group) chromosome...	137	1e-28
4	gb\|AC137997.2\| Oryza sativa chromosome 3 BAC OJ1499_D04 genomic ...	137	1e-28
5	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	137	1e-28
6	gb\|AY275710.1\| Kashmir bee virus, complete genome	48	0.088
7	gb\|CP000002.2\| Bacillus licheniformis ATCC 14580, complete genome	46	0.35
8	gb\|AE017333.1\| Bacillus licheniformis DSM 13, complete genome	46	0.35
9	emb\|CR954246.1\| Pseudoalteromonas haloplanktis str. TAC125 chrom...	44	1.4
10	gb\|AC093859.3\| Homo sapiens BAC clone RP11-538A7 from 2, complet...	44	1.4
11	emb\|CR753823.10\| Zebrafish DNA sequence from clone DKEY-41D18 in...	42	5.5
12	gb\|AC189219.1\| Brassica rapa subsp. pekinensis clone KBrB010F19,...	42	5.5
13	gb\|AC123713.13\| Mus musculus chromosome 7, clone RP23-391D20, co...	42	5.5
14	gb\|AC161439.3\| Mus musculus chromosome 7, clone RP24-297G19, com...	42	5.5
15	gb\|AC137110.11\| Mus musculus chromosome 7, clone RP23-399P8, com...	42	5.5
16	gb\|AC134933.2\| Oryza sativa (japonica cultivar-group) chromosome...	42	5.5
17	gb\|AC137617.3\| Oryza sativa (japonica cultivar-group) chromosome...	42	5.5
18	gb\|AC111022.9\| Mus musculus chromosome 7, clone RP23-157K2, comp...	42	5.5
19	gb\|AC154324.2\| Mus musculus BAC clone RP24-494E12 from chromosom...	42	5.5
20	gb\|AC117507.5\| Homo sapiens 3 BAC RP11-137K3 (Roswell Park Cance...	42	5.5
21	gb\|AC090605.7\| Homo sapiens chromosome 15, clone RP11-261P5, com...	42	5.5
22	gb\|AC105123.4\| Homo sapiens chromosome 15, clone RP11-94B17, com...	42	5.5
23	dbj\|AP008214.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	5.5
24	dbj\|AP008211.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	5.5
25	emb\|AL356074.11\| Human DNA sequence from clone RP11-265G20 on ch...	42	5.5
26	gb\|AC160061.6\| Mus musculus 10 BAC RP24-496L10 (Roswell Park Can...	42	5.5
27	emb\|BX000486.13\| Zebrafish DNA sequence from clone DKEY-149M16 i...	42	5.5
28	dbj\|AP006049.2\| Oryza sativa (japonica cultivar-group) genomic D...	42	5.5
29	emb\|BX005230.9\| Zebrafish DNA sequence from clone CH211-288J12 i...	42	5.5
30	gb\|AC105944.8\| Mus musculus chromosome 14, clone RP24-473K24, co...	42	5.5
31	gb\|AY919317.1\| Hydra vulgaris apoptosis inducing factor mRNA, co...	42	5.5
32	gb\|AC092203.16\| Mus musculus strain C57BL/6J chromosome 3 clone ...	42	5.5
33	gb\|AC092202.28\| Mus musculus strain C57BL/6J chromosome 3 clone ...	42	5.5
34	gb\|AC132383.5\| Mus musculus BAC clone RP23-434M19 from 10, compl...	42	5.5

>ref|NM_001057655.1| Oryza sativa (japonica cultivar-group) Os03g0724100 (Os03g0724100)
           mRNA, complete cds
          Length = 1334
 Score =  228 bits (115), Expect = 4e-56
 Identities = 331/403 (82%)
 Strand = Plus / Plus

                                                                       
Query: 417 aagcaaagatcgaggaactcagagctgcacttgggcctttgtccgcccgtggagagaaat 476
           ||||||||||| | || |||||||||||||||||||| |||||  ||  |||  ||||||
Sbjct: 216 aagcaaagatccaagagctcagagctgcacttgggccgttgtcttcctctggtaagaaat 275

                                                                       
Query: 477 attgtaatgaagcatgcttggtaagatatctcgaggcccgcaactggaatgttgacaagt 536
           |||||| |||||||||||||  ||||||||| |||||||| |||||||||||||| ||||
Sbjct: 276 attgtactgaagcatgcttgagaagatatctagaggcccgtaactggaatgttgataagt 335

                                                                       
Query: 537 ctagaaaaatgctggaagaaagtctccagtggagggctgtcaggaggcctgaggatattc 596
           | ||||||||| |||||||||||||  |||||||  | |     ||||| || || ||||
Sbjct: 336 ccagaaaaatgttggaagaaagtcttaagtggagaacagcttacaggccagaagacattc 395

                                                                       
Query: 597 gatggccggatgtttccgttgaagcagaaacaggtaaaatatatagggcacctttcacgg 656
           | ||||| ||  |||| |||||| |||||||||||||||| || || |||  |||    |
Sbjct: 396 gttggcccgagatttctgttgaatcagaaacaggtaaaatgtacagagcaagttttgtag 455

                                                                       
Query: 657 atagagaggggagaaccgtgattgtaatgagacctgcaaagcagaatacatcatctcatg 716
           |||||||||||||||| ||  |  | |||||||| ||||||||||| ||||| || ||||
Sbjct: 456 atagagaggggagaactgtcgtcattatgagacccgcaaagcagaacacatcgtcccatg 515

                                                                       
Query: 717 aagggcagttgcagtatcttacatataccttggagaatgcagtcctcaacctgcctcaag 776
           |||||||| | | || ||||  |||||| |||||||||||| |||||| | ||||| |||
Sbjct: 516 aagggcaggtacggtttcttgtatatacgttggagaatgcaatcctcagcttgcctgaag 575

                                                      
Query: 777 gtcaagacaaaatggtgtggctgatagacttcacaggatggac 819
            |||||| |||||||| ||| ||||||| ||||||||||||||
Sbjct: 576 atcaagagaaaatggtttggttgatagatttcacaggatggac 618



 Score =  123 bits (62), Expect = 2e-24
 Identities = 200/246 (81%)
 Strand = Plus / Plus

                                                                        
Query: 909  tgttcaatccgcccaaagtatttgaggcttcttttaaggttctcaaagtactgattgacc 968
            |||| ||||| ||||||||||||||||||| ||  |||||| |||||    |  ||||||
Sbjct: 708  tgtttaatccccccaaagtatttgaggctttttggaaggttgtcaaacatttccttgacc 767

                                                                        
Query: 969  cgaaatcagcccagaaactgaactttgtgttcaaggagaacgaagagagcatgaagacaa 1028
            | ||||||  ||||||  |||| ||||| | |  | ||||||| |||||||||||||   
Sbjct: 768  caaaatcaatccagaaggtgaattttgtatacctgaagaacgaggagagcatgaagatcc 827

                                                                        
Query: 1029 tgtacagccacattgatccagaagttcttcctgttgagtttggagggaagaacaatgtac 1088
            || |||   |||||||||||||||| |||||||| ||||||||||| |||||||||||  
Sbjct: 828  tgcacaagtacattgatccagaagtccttcctgtagagtttggaggaaagaacaatgtgg 887

                                                                        
Query: 1089 tgtacaaccatgaggattactctaagttgatgaccaaagatgacatcaaaacatcaagct 1148
            |||||| ||||||||| ||||| |||||||||   ||||||||||| ||||   ||||||
Sbjct: 888  tgtacagccatgaggagtactccaagttgatggtgaaagatgacattaaaatggcaagct 947

                  
Query: 1149 tttggg 1154
            ||||||
Sbjct: 948  tttggg 953

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>dbj|AK068261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149C21, full
           insert sequence
          Length = 1334

 Score =  228 bits (115), Expect = 4e-56
 Identities = 331/403 (82%)
 Strand = Plus / Plus

                                                                       
Query: 417 aagcaaagatcgaggaactcagagctgcacttgggcctttgtccgcccgtggagagaaat 476
           ||||||||||| | || |||||||||||||||||||| |||||  ||  |||  ||||||
Sbjct: 216 aagcaaagatccaagagctcagagctgcacttgggccgttgtcttcctctggtaagaaat 275

                                                                       
Query: 477 attgtaatgaagcatgcttggtaagatatctcgaggcccgcaactggaatgttgacaagt 536
           |||||| |||||||||||||  ||||||||| |||||||| |||||||||||||| ||||
Sbjct: 276 attgtactgaagcatgcttgagaagatatctagaggcccgtaactggaatgttgataagt 335

                                                                       
Query: 537 ctagaaaaatgctggaagaaagtctccagtggagggctgtcaggaggcctgaggatattc 596
           | ||||||||| |||||||||||||  |||||||  | |     ||||| || || ||||
Sbjct: 336 ccagaaaaatgttggaagaaagtcttaagtggagaacagcttacaggccagaagacattc 395

                                                                       
Query: 597 gatggccggatgtttccgttgaagcagaaacaggtaaaatatatagggcacctttcacgg 656
           | ||||| ||  |||| |||||| |||||||||||||||| || || |||  |||    |
Sbjct: 396 gttggcccgagatttctgttgaatcagaaacaggtaaaatgtacagagcaagttttgtag 455

                                                                       
Query: 657 atagagaggggagaaccgtgattgtaatgagacctgcaaagcagaatacatcatctcatg 716
           |||||||||||||||| ||  |  | |||||||| ||||||||||| ||||| || ||||
Sbjct: 456 atagagaggggagaactgtcgtcattatgagacccgcaaagcagaacacatcgtcccatg 515

                                                                       
Query: 717 aagggcagttgcagtatcttacatataccttggagaatgcagtcctcaacctgcctcaag 776
           |||||||| | | || ||||  |||||| |||||||||||| |||||| | ||||| |||
Sbjct: 516 aagggcaggtacggtttcttgtatatacgttggagaatgcaatcctcagcttgcctgaag 575

                                                      
Query: 777 gtcaagacaaaatggtgtggctgatagacttcacaggatggac 819
            |||||| |||||||| ||| ||||||| ||||||||||||||
Sbjct: 576 atcaagagaaaatggtttggttgatagatttcacaggatggac 618



 Score =  123 bits (62), Expect = 2e-24
 Identities = 200/246 (81%)
 Strand = Plus / Plus

                                                                        
Query: 909  tgttcaatccgcccaaagtatttgaggcttcttttaaggttctcaaagtactgattgacc 968
            |||| ||||| ||||||||||||||||||| ||  |||||| |||||    |  ||||||
Sbjct: 708  tgtttaatccccccaaagtatttgaggctttttggaaggttgtcaaacatttccttgacc 767

                                                                        
Query: 969  cgaaatcagcccagaaactgaactttgtgttcaaggagaacgaagagagcatgaagacaa 1028
            | ||||||  ||||||  |||| ||||| | |  | ||||||| |||||||||||||   
Sbjct: 768  caaaatcaatccagaaggtgaattttgtatacctgaagaacgaggagagcatgaagatcc 827

                                                                        
Query: 1029 tgtacagccacattgatccagaagttcttcctgttgagtttggagggaagaacaatgtac 1088
            || |||   |||||||||||||||| |||||||| ||||||||||| |||||||||||  
Sbjct: 828  tgcacaagtacattgatccagaagtccttcctgtagagtttggaggaaagaacaatgtgg 887

                                                                        
Query: 1089 tgtacaaccatgaggattactctaagttgatgaccaaagatgacatcaaaacatcaagct 1148
            |||||| ||||||||| ||||| |||||||||   ||||||||||| ||||   ||||||
Sbjct: 888  tgtacagccatgaggagtactccaagttgatggtgaaagatgacattaaaatggcaagct 947

                  
Query: 1149 tttggg 1154
            ||||||
Sbjct: 948  tttggg 953

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>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06
            map near C10769, complete sequence
          Length = 194856

 Score =  137 bits (69), Expect = 1e-28
 Identities = 120/137 (87%)
 Strand = Plus / Minus

                                                                        
Query: 434  ctcagagctgcacttgggcctttgtccgcccgtggagagaaatattgtaatgaagcatgc 493
            |||||||||||||||||||| |||||  ||  |||  |||||||||||| ||||||||||
Sbjct: 8931 ctcagagctgcacttgggccgttgtcttcctctggtaagaaatattgtactgaagcatgc 8872

                                                                        
Query: 494  ttggtaagatatctcgaggcccgcaactggaatgttgacaagtctagaaaaatgctggaa 553
            |||  ||||||||| |||||||| |||||||||||||| ||||| ||||||||| |||||
Sbjct: 8871 ttgagaagatatctagaggcccgtaactggaatgttgataagtccagaaaaatgttggaa 8812

                             
Query: 554  gaaagtctccagtggag 570
            ||||||||  |||||||
Sbjct: 8811 gaaagtcttaagtggag 8795



 Score =  115 bits (58), Expect = 5e-22
 Identities = 127/150 (84%)
 Strand = Plus / Minus

                                                                        
Query: 1005 agaacgaagagagcatgaagacaatgtacagccacattgatccagaagttcttcctgttg 1064
            ||||||| |||||||||||||   || |||   |||||||||||||||| |||||||| |
Sbjct: 8022 agaacgaggagagcatgaagatcctgcacaagtacattgatccagaagtccttcctgtag 7963

                                                                        
Query: 1065 agtttggagggaagaacaatgtactgtacaaccatgaggattactctaagttgatgacca 1124
            |||||||||| |||||||||||  |||||| ||||||||| ||||| |||||||||   |
Sbjct: 7962 agtttggaggaaagaacaatgtggtgtacagccatgaggagtactccaagttgatggtga 7903

                                          
Query: 1125 aagatgacatcaaaacatcaagcttttggg 1154
            |||||||||| ||||   ||||||||||||
Sbjct: 7902 aagatgacattaaaatggcaagcttttggg 7873



 Score = 91.7 bits (46), Expect = 7e-15
 Identities = 103/122 (84%)
 Strand = Plus / Minus

                                                                        
Query: 698  cagaatacatcatctcatgaagggcagttgcagtatcttacatataccttggagaatgca 757
            ||||| ||||| || |||||||||||| | | || ||||  |||||| ||||||||||||
Sbjct: 8476 cagaacacatcgtcccatgaagggcaggtacggtttcttgtatatacgttggagaatgca 8417

                                                                        
Query: 758  gtcctcaacctgcctcaaggtcaagacaaaatggtgtggctgatagacttcacaggatgg 817
             |||||| | ||||| ||| |||||| |||||||| ||| ||||||| ||||||||||||
Sbjct: 8416 atcctcagcttgcctgaagatcaagagaaaatggtttggttgatagatttcacaggatgg 8357

              
Query: 818  ac 819
            ||
Sbjct: 8356 ac 8355



 Score = 44.1 bits (22), Expect = 1.4
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 909  tgttcaatccgcccaaagtatttgaggctt 938
            |||| ||||| |||||||||||||||||||
Sbjct: 8265 tgtttaatccccccaaagtatttgaggctt 8236

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>gb|AC137997.2| Oryza sativa chromosome 3 BAC OJ1499_D04 genomic sequence, complete
             sequence
          Length = 91084

 Score =  137 bits (69), Expect = 1e-28
 Identities = 120/137 (87%)
 Strand = Plus / Minus

                                                                         
Query: 434   ctcagagctgcacttgggcctttgtccgcccgtggagagaaatattgtaatgaagcatgc 493
             |||||||||||||||||||| |||||  ||  |||  |||||||||||| ||||||||||
Sbjct: 41016 ctcagagctgcacttgggccgttgtcttcctctggtaagaaatattgtactgaagcatgc 40957

                                                                         
Query: 494   ttggtaagatatctcgaggcccgcaactggaatgttgacaagtctagaaaaatgctggaa 553
             |||  ||||||||| |||||||| |||||||||||||| ||||| ||||||||| |||||
Sbjct: 40956 ttgagaagatatctagaggcccgtaactggaatgttgataagtccagaaaaatgttggaa 40897

                              
Query: 554   gaaagtctccagtggag 570
             ||||||||  |||||||
Sbjct: 40896 gaaagtcttaagtggag 40880



 Score =  115 bits (58), Expect = 5e-22
 Identities = 127/150 (84%)
 Strand = Plus / Minus

                                                                         
Query: 1005  agaacgaagagagcatgaagacaatgtacagccacattgatccagaagttcttcctgttg 1064
             ||||||| |||||||||||||   || |||   |||||||||||||||| |||||||| |
Sbjct: 40107 agaacgaggagagcatgaagatcctgcacaagtacattgatccagaagtccttcctgtag 40048

                                                                         
Query: 1065  agtttggagggaagaacaatgtactgtacaaccatgaggattactctaagttgatgacca 1124
             |||||||||| |||||||||||  |||||| ||||||||| ||||| |||||||||   |
Sbjct: 40047 agtttggaggaaagaacaatgtggtgtacagccatgaggagtactccaagttgatggtga 39988

                                           
Query: 1125  aagatgacatcaaaacatcaagcttttggg 1154
             |||||||||| ||||   ||||||||||||
Sbjct: 39987 aagatgacattaaaatggcaagcttttggg 39958



 Score = 91.7 bits (46), Expect = 7e-15
 Identities = 103/122 (84%)
 Strand = Plus / Minus

                                                                         
Query: 698   cagaatacatcatctcatgaagggcagttgcagtatcttacatataccttggagaatgca 757
             ||||| ||||| || |||||||||||| | | || ||||  |||||| ||||||||||||
Sbjct: 40561 cagaacacatcgtcccatgaagggcaggtacggtttcttgtatatacgttggagaatgca 40502

                                                                         
Query: 758   gtcctcaacctgcctcaaggtcaagacaaaatggtgtggctgatagacttcacaggatgg 817
              |||||| | ||||| ||| |||||| |||||||| ||| ||||||| ||||||||||||
Sbjct: 40501 atcctcagcttgcctgaagatcaagagaaaatggtttggttgatagatttcacaggatgg 40442

               
Query: 818   ac 819
             ||
Sbjct: 40441 ac 40440



 Score = 44.1 bits (22), Expect = 1.4
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 909   tgttcaatccgcccaaagtatttgaggctt 938
             |||| ||||| |||||||||||||||||||
Sbjct: 40350 tgtttaatccccccaaagtatttgaggctt 40321

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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  137 bits (69), Expect = 1e-28
 Identities = 120/137 (87%)
 Strand = Plus / Plus

                                                                            
Query: 434      ctcagagctgcacttgggcctttgtccgcccgtggagagaaatattgtaatgaagcatgc 493
                |||||||||||||||||||| |||||  ||  |||  |||||||||||| ||||||||||
Sbjct: 29221782 ctcagagctgcacttgggccgttgtcttcctctggtaagaaatattgtactgaagcatgc 29221841

                                                                            
Query: 494      ttggtaagatatctcgaggcccgcaactggaatgttgacaagtctagaaaaatgctggaa 553
                |||  ||||||||| |||||||| |||||||||||||| ||||| ||||||||| |||||
Sbjct: 29221842 ttgagaagatatctagaggcccgtaactggaatgttgataagtccagaaaaatgttggaa 29221901

                                 
Query: 554      gaaagtctccagtggag 570
                ||||||||  |||||||
Sbjct: 29221902 gaaagtcttaagtggag 29221918



 Score =  115 bits (58), Expect = 5e-22
 Identities = 127/150 (84%)
 Strand = Plus / Plus

                                                                            
Query: 1005     agaacgaagagagcatgaagacaatgtacagccacattgatccagaagttcttcctgttg 1064
                ||||||| |||||||||||||   || |||   |||||||||||||||| |||||||| |
Sbjct: 29222691 agaacgaggagagcatgaagatcctgcacaagtacattgatccagaagtccttcctgtag 29222750

                                                                            
Query: 1065     agtttggagggaagaacaatgtactgtacaaccatgaggattactctaagttgatgacca 1124
                |||||||||| |||||||||||  |||||| ||||||||| ||||| |||||||||   |
Sbjct: 29222751 agtttggaggaaagaacaatgtggtgtacagccatgaggagtactccaagttgatggtga 29222810

                                              
Query: 1125     aagatgacatcaaaacatcaagcttttggg 1154
                |||||||||| ||||   ||||||||||||
Sbjct: 29222811 aagatgacattaaaatggcaagcttttggg 29222840



 Score = 91.7 bits (46), Expect = 7e-15
 Identities = 103/122 (84%)
 Strand = Plus / Plus

                                                                            
Query: 698      cagaatacatcatctcatgaagggcagttgcagtatcttacatataccttggagaatgca 757
                ||||| ||||| || |||||||||||| | | || ||||  |||||| ||||||||||||
Sbjct: 29222237 cagaacacatcgtcccatgaagggcaggtacggtttcttgtatatacgttggagaatgca 29222296

                                                                            
Query: 758      gtcctcaacctgcctcaaggtcaagacaaaatggtgtggctgatagacttcacaggatgg 817
                 |||||| | ||||| ||| |||||| |||||||| ||| ||||||| ||||||||||||
Sbjct: 29222297 atcctcagcttgcctgaagatcaagagaaaatggtttggttgatagatttcacaggatgg 29222356

                  
Query: 818      ac 819
                ||
Sbjct: 29222357 ac 29222358



 Score = 44.1 bits (22), Expect = 1.4
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 909      tgttcaatccgcccaaagtatttgaggctt 938
                |||| ||||| |||||||||||||||||||
Sbjct: 29222448 tgtttaatccccccaaagtatttgaggctt 29222477

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>gb|AY275710.1| Kashmir bee virus, complete genome
          Length = 9524

 Score = 48.1 bits (24), Expect = 0.088
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 348 gagttgaagaaaacatgttttggagaaa 375
           ||||||||||||||||||||||| ||||
Sbjct: 624 gagttgaagaaaacatgttttggcgaaa 597

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>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 1120    gaccaaagatgacatcaaaacat 1142
               |||||||||||||||||||||||
Sbjct: 1424656 gaccaaagatgacatcaaaacat 1424634

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>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 1120    gaccaaagatgacatcaaaacat 1142
               |||||||||||||||||||||||
Sbjct: 1425519 gaccaaagatgacatcaaaacat 1425497

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>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete
              sequence
          Length = 3214944

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1344   aaacaaatgtaactacaaaata 1365
              ||||||||||||||||||||||
Sbjct: 618224 aaacaaatgtaactacaaaata 618203

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>gb|AC093859.3| Homo sapiens BAC clone RP11-538A7 from 2, complete sequence
          Length = 107842

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1233  aaagttgagaaacattggtcag 1254
             ||||||||||||||||||||||
Sbjct: 91763 aaagttgagaaacattggtcag 91784

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>emb|CR753823.10| Zebrafish DNA sequence from clone DKEY-41D18 in linkage group 12,
             complete sequence
          Length = 145069

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1332  ataaaaagaaataaacaaatgtaac 1356
             ||||||||||||||| |||||||||
Sbjct: 44956 ataaaaagaaataaataaatgtaac 44980

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>gb|AC189219.1| Brassica rapa subsp. pekinensis clone KBrB010F19, complete sequence
          Length = 133217

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 1331 tataaaaagaaataaacaaatgtaa 1355
            |||||||| ||||||||||||||||
Sbjct: 3789 tataaaaacaaataaacaaatgtaa 3765

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>gb|AC123713.13| Mus musculus chromosome 7, clone RP23-391D20, complete sequence
          Length = 183590

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 923    aaagtatttgaggcttctttt 943
              |||||||||||||||||||||
Sbjct: 166131 aaagtatttgaggcttctttt 166151

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>gb|AC161439.3| Mus musculus chromosome 7, clone RP24-297G19, complete sequence
          Length = 192731

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1335  aaaagaaataaacaaatgtaa 1355
             |||||||||||||||||||||
Sbjct: 79546 aaaagaaataaacaaatgtaa 79566

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>gb|AC137110.11| Mus musculus chromosome 7, clone RP23-399P8, complete sequence
          Length = 199827

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 923    aaagtatttgaggcttctttt 943
              |||||||||||||||||||||
Sbjct: 152960 aaagtatttgaggcttctttt 152940

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>gb|AC134933.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0579A05,
             complete sequence
          Length = 107407

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 351   ttgaagaaaacatgttttgga 371
             |||||||||||||||||||||
Sbjct: 43525 ttgaagaaaacatgttttgga 43505

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>gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0084P24,
              complete sequence
          Length = 148784

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 351    ttgaagaaaacatgttttgga 371
              |||||||||||||||||||||
Sbjct: 148206 ttgaagaaaacatgttttgga 148186

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>gb|AC111022.9| Mus musculus chromosome 7, clone RP23-157K2, complete sequence
          Length = 208225

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1335   aaaagaaataaacaaatgtaa 1355
              |||||||||||||||||||||
Sbjct: 198172 aaaagaaataaacaaatgtaa 198152

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>gb|AC154324.2| Mus musculus BAC clone RP24-494E12 from chromosome 14, complete sequence
          Length = 198197

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 1340   aaataaacaaatgtaactacaaaat 1364
              |||||||||||||||||| ||||||
Sbjct: 121897 aaataaacaaatgtaactgcaaaat 121873

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>gb|AC117507.5| Homo sapiens 3 BAC RP11-137K3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 134182

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 614   gttgaagcagaaacaggtaaaatat 638
             |||||| ||||||||||||||||||
Sbjct: 34674 gttgaaacagaaacaggtaaaatat 34650

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>gb|AC090605.7| Homo sapiens chromosome 15, clone RP11-261P5, complete sequence
          Length = 166870

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 763    caacctgcctcaaggtcaaga 783
              |||||||||||||||||||||
Sbjct: 136304 caacctgcctcaaggtcaaga 136284

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>gb|AC105123.4| Homo sapiens chromosome 15, clone RP11-94B17, complete sequence
          Length = 134569

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 763   caacctgcctcaaggtcaaga 783
             |||||||||||||||||||||
Sbjct: 13909 caacctgcctcaaggtcaaga 13889

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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 879      attacccggagaggcttgcggttgcattt 907
                |||||||| |||||||||||||| |||||
Sbjct: 25322235 attacccgaagaggcttgcggttccattt 25322207

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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 351      ttgaagaaaacatgttttgga 371
                |||||||||||||||||||||
Sbjct: 20309935 ttgaagaaaacatgttttgga 20309915

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>emb|AL356074.11| Human DNA sequence from clone RP11-265G20 on chromosome 10, complete
             sequence
          Length = 70187

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1147  cttttggggggcagatggtaa 1167
             |||||||||||||||||||||
Sbjct: 34903 cttttggggggcagatggtaa 34883

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>gb|AC160061.6| Mus musculus 10 BAC RP24-496L10 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 174662

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1341  aataaacaaatgtaactacaa 1361
             |||||||||||||||||||||
Sbjct: 60232 aataaacaaatgtaactacaa 60212

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>emb|BX000486.13| Zebrafish DNA sequence from clone DKEY-149M16 in linkage group 10,
             complete sequence
          Length = 195419

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1057  tcctgttgagtttggagggaa 1077
             |||||||||||||||||||||
Sbjct: 23242 tcctgttgagtttggagggaa 23262

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>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0016N23
          Length = 147336

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 879   attacccggagaggcttgcggttgcattt 907
             |||||||| |||||||||||||| |||||
Sbjct: 97420 attacccgaagaggcttgcggttccattt 97392

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>emb|BX005230.9| Zebrafish DNA sequence from clone CH211-288J12 in linkage group 10,
             complete sequence
          Length = 67465

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 905   tttatgttcaatccgcccaaa 925
             |||||||||||||||||||||
Sbjct: 26098 tttatgttcaatccgcccaaa 26078

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>gb|AC105944.8| Mus musculus chromosome 14, clone RP24-473K24, complete sequence
          Length = 156945

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1340   aaataaacaaatgtaactacaaaat 1364
              |||||||||||||||||| ||||||
Sbjct: 136323 aaataaacaaatgtaactgcaaaat 136347

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>gb|AY919317.1| Hydra vulgaris apoptosis inducing factor mRNA, complete cds
          Length = 1818

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 605  gatgtttccgttgaagcagaaacag 629
            |||||| ||||||||||||||||||
Sbjct: 1603 gatgttaccgttgaagcagaaacag 1627

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>gb|AC092203.16| Mus musculus strain C57BL/6J chromosome 3 clone rp23-422n18, complete
              sequence
          Length = 188880

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1331   tataaaaagaaataaacaaatgtaa 1355
              |||||||| ||||||||||||||||
Sbjct: 173407 tataaaaataaataaacaaatgtaa 173431

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>gb|AC092202.28| Mus musculus strain C57BL/6J chromosome 3 clone rp23-407b16, complete
            sequence
          Length = 196249

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1331 tataaaaagaaataaacaaatgtaa 1355
            |||||||| ||||||||||||||||
Sbjct: 8381 tataaaaataaataaacaaatgtaa 8405

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>gb|AC132383.5| Mus musculus BAC clone RP23-434M19 from 10, complete sequence
          Length = 212242

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1330  gtataaaaagaaataaacaaa 1350
             |||||||||||||||||||||
Sbjct: 45362 gtataaaaagaaataaacaaa 45342


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 266,121,680
Number of extensions: 14017079
Number of successful extensions: 295946
Number of sequences better than 10.0: 34
Number of HSP's gapped: 295939
Number of HSP's successfully gapped: 49
Length of query: 1433
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1410
Effective length of database: 18,503,978,556
Effective search space: 26090609763960
Effective search space used: 26090609763960
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result