ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf95m04 |
|---|---|
| Clone Library Name | barley_pub |
>Q9FXE5:FUCO3_ARATH Alpha-L-fucosidase 3 precursor - Arabidopsis thaliana (Mouse-ear| cress) Length = 372 Score = 356 bits (914), Expect = 1e-97 Identities = 183/342 (53%), Positives = 229/342 (66%), Gaps = 7/342 (2%) Frame = +1 Query: 112 CDFPAIFNFGDSYSDTGAFPALFPAVQPPYGQTFFGMPAGRQSDGRLTIDFMAQSLGLRY 291 C FPAIFNFGDS SDTG A F PP+G +FFG PAGR DGRL IDF+A+SLGL Y Sbjct: 26 CHFPAIFNFGDSNSDTGGLSAAFGQAGPPHGSSFFGSPAGRYCDGRLVIDFIAESLGLPY 85 Query: 292 LNAYLDSLGSNFTQGANFASAAGTIRRVNGSLWTSGYSPISLDVQIWQFQQFINRSRFVY 471 L+A+LDS+GSNF+ GANFA+A IR +N +L SG+SP SLDVQ QF F NRS+ V Sbjct: 86 LSAFLDSVGSNFSHGANFATAGSPIRALNSTLRQSGFSPFSLDVQFVQFYNFHNRSQTVR 145 Query: 472 NNIGGIYRAILPKPDHLVSKALYTFDIGANDLAMGYLENMTTAQVEAYVPDLMERLASAI 651 + GG+Y+ +LP+ D SKALYTFDIG NDL GY N T QVE VP+++ + +AI Sbjct: 146 SR-GGVYKTMLPESDSF-SKALYTFDIGQNDLTAGYFANKTVEQVETEVPEIISQFMNAI 203 Query: 652 QTVYNHGGRYFWVHNTGTLGCLPYALVYRPDLAAEKDDAGCSVALNAGPQFFNARLKETV 831 + +Y GGRYFW+HNTG +GCL Y + P+ A++ D GC LN Q FN LK+ V Sbjct: 204 KNIYGQGGRYFWIHNTGPIGCLAYVIERFPNKASDFDSHGCVSPLNHLAQQFNHALKQAV 263 Query: 832 ARLRVALPEAAFTYVDVYAATYKLMSEAKKFGFGDPLRVCCGYGGGQYNFDKNIRC---- 999 LR +L EAA TYVDVY+ ++L A+ GF L CCG+ GG+YN++K I C Sbjct: 264 IELRSSLSEAAITYVDVYSLKHELFVHAQGHGFKGSLVSCCGH-GGKYNYNKGIGCGMKK 322 Query: 1000 ---GDPVLEGKSCEDPSKSVSWDGVHLTEAAYKFIFDQIVDG 1116 G V GK C++P K+V WDGVH T+AA KFIFD+I G Sbjct: 323 IVKGKEVYIGKPCDEPDKAVVWDGVHFTQAANKFIFDKIAPG 364
>Q7Y1X1:EST_HEVBR Esterase precursor - Hevea brasiliensis (Para rubber tree)| Length = 391 Score = 348 bits (892), Expect = 4e-95 Identities = 187/356 (52%), Positives = 230/356 (64%), Gaps = 8/356 (2%) Frame = +1 Query: 112 CDFPAIFNFGDSYSDTGAFPALFPAVQPPYGQTFFGMPAGRQSDGRLTIDFMAQSLGLRY 291 CDFPAIFNFGDS SDTG A F + PPYG+TFF GR SDGRL IDF+A+S L Y Sbjct: 30 CDFPAIFNFGDSNSDTGGKAAAFYPLNPPYGETFFHRSTGRYSDGRLIIDFIAESFNLPY 89 Query: 292 LNAYLDSLGSNFTQGANFASAAGTIRRVNGSLWT-SGYSPISLDVQIWQFQQFINRSRFV 468 L+ YL SLGSNF GA+FA+A TI+ + G+SP LDVQ QF+QFI RS+F+ Sbjct: 90 LSPYLSSLGSNFKHGADFATAGSTIKLPTTIIPAHGGFSPFYLDVQYSQFRQFIPRSQFI 149 Query: 469 YNNIGGIYRAILPKPDHLVSKALYTFDIGANDLAMGYLENMTTAQVEAYVPDLMERLASA 648 GGI+ ++P+ ++ KALYTFDIG NDL G+L N+T +V A VPDL+ ++ Sbjct: 150 -RETGGIFAELVPE-EYYFEKALYTFDIGQNDLTEGFL-NLTVEEVNATVPDLVNSFSAN 206 Query: 649 IQTVYNHGGRYFWVHNTGTLGCLPYALVYRPDLAAEKDDAGCSVALNAGPQFFNARLKET 828 ++ +Y+ G R FW+HNTG +GCL + L Y P AEKD AGC+ A N Q FN +LKE Sbjct: 207 VKKIYDLGARTFWIHNTGPIGCLSFILTYFP--WAEKDSAGCAKAYNEVAQHFNHKLKEI 264 Query: 829 VARLRVALPEAAFTYVDVYAATYKLMSEAKKFGFGDPLRVCCGYGGGQYNFDKNIRCGDP 1008 VA+LR LP A F +VD+Y+ Y L SE +K GF PL CCGY GG+YNF CGD Sbjct: 265 VAQLRKDLPLATFVHVDIYSVKYSLFSEPEKHGFEFPLITCCGY-GGKYNFSVTAPCGDT 323 Query: 1009 VLEGK-------SCEDPSKSVSWDGVHLTEAAYKFIFDQIVDGALSDPPVPLRGAC 1155 V SC PS V+WDG H TEAA ++ FDQI GA SDPPVPL AC Sbjct: 324 VTADDGTKIVVGSCACPSVRVNWDGAHYTEAANEYFFDQISTGAFSDPPVPLNMAC 379
>P40602:APG_ARATH Anter-specific proline-rich protein APG precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 534 Score = 119 bits (297), Expect = 4e-26 Identities = 96/344 (27%), Positives = 155/344 (45%), Gaps = 19/344 (5%) Frame = +1 Query: 121 PAIFNFGDSYSDTGAFPALFPAVQP---PYGQTF-FGMPAGRQSDGRLTIDFMAQSLGLR 288 PA+F FGDS DTG L ++ PYG F F + GR S+G + D++A+ +G++ Sbjct: 203 PAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGVK 262 Query: 289 YL-NAYLDSL--GSNFTQGANFASAAGTIRRVNGSLWTSGYSPISLDV--------QIWQ 435 + AYLD ++ G +FAS +GY+P + + Q+ Sbjct: 263 EIVPAYLDPKIQPNDLLTGVSFASGG------------AGYNPTTSEAANAIPMLDQLTY 310 Query: 436 FQQFINR-SRFVYNNIGGIYRAILPKPDHLVSKALYTFDIGANDLAMGYLENMTTA---Q 603 FQ +I + +R V A L K + L+SK + G+NDL + Y + Sbjct: 311 FQDYIEKVNRLVRQEKSQYKLAGLEKTNQLISKGVAIVVGGSNDLIITYFGSGAQRLKND 370 Query: 604 VEAYVPDLMERLASAIQTVYNHGGRYFWVHNTGTLGCLPYALVYRPDLAAEKDDAGCSVA 783 +++Y + + AS + +Y +G R V T LGC+P + + + C+ Sbjct: 371 IDSYTTIIADSAASFVLQLYGYGARRIGVIGTPPLGCVPSQRLKKKKI--------CNEE 422 Query: 784 LNAGPQFFNARLKETVARLRVALPEAAFTYVDVYAATYKLMSEAKKFGFGDPLRVCCGYG 963 LN Q FN++L + +L LP + F Y+D+Y +++ +GF + + CC G Sbjct: 423 LNYASQLFNSKLLLILGQLSKTLPNSTFVYMDIYTIISQMLETPAAYGFEETKKPCCKTG 482 Query: 964 GGQYNFDKNIRCGDPVLEGKSCEDPSKSVSWDGVHLTEAAYKFI 1095 C K C + S + WDGVH T+ AYK I Sbjct: 483 ----LLSAGALCKKST--SKICPNTSSYLFWDGVHPTQRAYKTI 520
>P40603:APG_BRANA Anther-specific proline-rich protein APG - Brassica napus (Rape)| Length = 449 Score = 103 bits (258), Expect = 1e-21 Identities = 90/343 (26%), Positives = 154/343 (44%), Gaps = 20/343 (5%) Frame = +1 Query: 121 PAIFNFGDSYSDTGAFPALFPAVQ---PPYGQTF-FGMPAGRQSDGRLTIDFMAQSLGLR 288 PA+F FGDS DTG L ++ PYG F G+ GR S+GR+ D++++ LG++ Sbjct: 124 PAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGVK 183 Query: 289 YL-NAYLDSL--------GSNFTQGANFASA-AGTIRRVNGSLWTSGYSPISLDVQIWQF 438 + AY+D S+ G +FAS AG + + + S + ++ Q+ F Sbjct: 184 EIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYLPQTSES-----WKVTTMLDQLTYF 238 Query: 439 QQFINRSRFVYNNIGGIYRAILPKPDHLVSKALYTFDIGANDLAMGYLENMTTA---QVE 609 Q + R + + K +VSK G+NDL Y N V+ Sbjct: 239 QDYKKRMKKLVGK---------KKTKKIVSKGAAIVVAGSNDLIYTYFGNGAQHLKNDVD 289 Query: 610 AYVPDLMERLASAIQTVYNHGGRYFWVHNTGTLGCLPYALVYRPDLAAEKDDAGCSVALN 789 ++ + + AS + +Y +G R V T +GC P V + + C+ LN Sbjct: 290 SFTTMMADSAASFVLQLYGYGARRIGVIGTPPIGCTPSQRVKKKKI--------CNEDLN 341 Query: 790 AGPQFFNARLKETVARLRVALPEAAFTYVDVYAATYKLMSEAKKFGFGDPLRVCCGYG-- 963 Q FN++L + +L LP + Y D+Y+ K++ + +GF + + CC G Sbjct: 342 YAAQLFNSKLVIILGQLSKTLPNSTIVYGDIYSIFSKMLESPEDYGFEEIKKPCCKIGLT 401 Query: 964 -GGQYNFDKNIRCGDPVLEGKSCEDPSKSVSWDGVHLTEAAYK 1089 GG + ++ + K+ + S + WDG+H ++ AY+ Sbjct: 402 KGGVFCKERTL---------KNMSNASSYLFWDGLHPSQRAYE 435
>Q8Y662:PYRB_LISMO Aspartate carbamoyltransferase - Listeria monocytogenes| Length = 303 Score = 34.3 bits (77), Expect = 1.2 Identities = 15/52 (28%), Positives = 29/52 (55%) Frame = -3 Query: 579 VAHGEVVGADVEGVKRLGDQVIWFGQDRSVDSTYVVVDEAAPVDELLELPDL 424 + H V ++++ +KRLG ++ + G D +Y+ PVDE++E D+ Sbjct: 155 IRHSRVANSNMKVLKRLGAELFFSGPREWFDESYLAYGTYLPVDEIVEKVDV 206
>Q92AH0:PYRB_LISIN Aspartate carbamoyltransferase - Listeria innocua| Length = 303 Score = 33.5 bits (75), Expect = 2.0 Identities = 15/52 (28%), Positives = 29/52 (55%) Frame = -3 Query: 579 VAHGEVVGADVEGVKRLGDQVIWFGQDRSVDSTYVVVDEAAPVDELLELPDL 424 + H V ++++ +KRLG ++ + G D +Y+ PVDE++E D+ Sbjct: 155 IRHSRVANSNMKVLKRLGAKLFFSGPKEWFDDSYLEYGTYLPVDEIVEKVDV 206
>Q6PEV3:WIPF2_MOUSE WAS/WASL-interacting protein family member 2 - Mus musculus (Mouse)| Length = 440 Score = 31.6 bits (70), Expect = 7.5 Identities = 11/25 (44%), Positives = 19/25 (76%) Frame = +3 Query: 204 PDLLRHASREAERRPPHHRLHGSKP 278 P ++R+ +R+A PP +R+HGS+P Sbjct: 329 PPMIRNGARDAPPPPPPYRMHGSEP 353
>Q9L4T8:PYRB_ENTFA Aspartate carbamoyltransferase - Enterococcus faecalis| (Streptococcus faecalis) Length = 308 Score = 31.6 bits (70), Expect = 7.5 Identities = 13/52 (25%), Positives = 29/52 (55%) Frame = -3 Query: 579 VAHGEVVGADVEGVKRLGDQVIWFGQDRSVDSTYVVVDEAAPVDELLELPDL 424 + H V ++++ + RLG ++ + G + D + V + P+DE++E D+ Sbjct: 168 ITHSRVAKSNMQLLNRLGAEIYFSGPEEWYDHQFDVYGQYVPLDEIVEKVDV 219
>Q9H013:ADA19_HUMAN ADAM 19 precursor - Homo sapiens (Human)| Length = 956 Score = 31.6 bits (70), Expect = 7.5 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = +3 Query: 204 PDLLRHASREAERRPPHHRLHGSKPGAALPECVSGFAREQLHAGSQ 341 P++LR S+ R PP + L G P A LP +S AR GSQ Sbjct: 781 PEILRKPSQPPPRPPPDY-LRGGSPPAPLPAHLSRAARNSPGPGSQ 825
>Q8TF74:WIPF2_HUMAN WAS/WASL-interacting protein family member 2 - Homo sapiens (Human)| Length = 440 Score = 31.2 bits (69), Expect = 9.8 Identities = 11/25 (44%), Positives = 19/25 (76%) Frame = +3 Query: 204 PDLLRHASREAERRPPHHRLHGSKP 278 P ++R+ +R+A PP +R+HGS+P Sbjct: 329 PPVIRNGARDAPPPPPPYRMHGSEP 353
>Q71YH8:PYRB_LISMF Aspartate carbamoyltransferase - Listeria monocytogenes serotype 4b| (strain F2365) Length = 303 Score = 31.2 bits (69), Expect = 9.8 Identities = 14/52 (26%), Positives = 28/52 (53%) Frame = -3 Query: 579 VAHGEVVGADVEGVKRLGDQVIWFGQDRSVDSTYVVVDEAAPVDELLELPDL 424 + H V ++++ +KRLG ++ + G D +Y+ VDE++E D+ Sbjct: 155 IRHSRVANSNMKVLKRLGAELFFSGPREWFDESYLAYGTYLSVDEIVEKVDV 206
>Q07722:PLCB4_BOVIN 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta 4 -| Bos taurus (Bovine) Length = 1023 Score = 31.2 bits (69), Expect = 9.8 Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 8/134 (5%) Frame = +1 Query: 145 SYSDTGAFPALFPAVQPP--YGQT--FFGMPAGRQSDGRLTIDFMAQSLGLRYLNAY-LD 309 SY GA + P + Y Q F G + + + +S+GL YL + ++ Sbjct: 399 SYKYVGATTNIHPYLSTMINYAQPVKFQGFHVAEERNIHYNMSSFNESVGLGYLKTHAIE 458 Query: 310 SLGSNFTQGANFASAAGTIRRVNGS---LWTSGYSPISLDVQIWQFQQFINRSRFVYNNI 480 + N Q + G + N W SG +SL+ Q +N+ +F YN Sbjct: 459 FVNYNKRQMSRIYPKGGRVDSSNYMPQIFWNSGCQMVSLNYQTPDLAMQLNQGKFEYNGS 518 Query: 481 GGIYRAILPKPDHL 522 G L KPD + Sbjct: 519 CG----YLLKPDFM 528
>Q01970:PLCB3_HUMAN 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta 3 -| Homo sapiens (Human) Length = 1234 Score = 31.2 bits (69), Expect = 9.8 Identities = 17/48 (35%), Positives = 26/48 (54%) Frame = +3 Query: 267 GSKPGAALPECVSGFAREQLHAGSQFRERRWNYQTSERELVDLRIQPH 410 G++PG + E L GS+F +W+ +TS R LV LR+ P+ Sbjct: 3 GAQPGVHALQLEPPTVVETLRRGSKFI--KWDEETSSRNLVTLRVDPN 48
>P10480:GCAT_AERHY Phosphatidylcholine-sterol acyltransferase precursor - Aeromonas| hydrophila Length = 335 Score = 31.2 bits (69), Expect = 9.8 Identities = 70/299 (23%), Positives = 104/299 (34%), Gaps = 7/299 (2%) Frame = +1 Query: 91 VRSDESPCDFPAIFNFGDSYSDTGAFPAL---FPAVQPPYGQTFFGMPAGRQSDGRLTID 261 V++ +S F I FGDS SDTG + + PPY + GR S+G + Sbjct: 16 VQAADSRPAFSRIVMFGDSLSDTGKMYSKMRGYLPSSPPYYE-------GRFSNGPV--- 65 Query: 262 FMAQSLGLRYLNAYLDSLGSNF--TQGANFASAAGTIRRVNGSLWTSGYSPI-SLDVQIW 432 +L+ L + F AN A T N W Y I +LD ++ Sbjct: 66 -------------WLEQLTNEFPGLTIANEAEGGPTAVAYNKISWNPKYQVINNLDYEV- 111 Query: 433 QFQQFINRSRFVYNNIGGIYRAILPKPDHLVSKALYTFDIGAND-LAMGYLENMTTAQVE 609 QF+ + F KPD LV +GAND LA G+ +V Sbjct: 112 --TQFLQKDSF--------------KPDDLV-----ILWVGANDYLAYGWNTEQDAKRVR 150 Query: 610 AYVPDLMERLASAIQTVYNHGGRYFWVHNTGTLGCLPYALVYRPDLAAEKDDAGCSVALN 789 + D R+ +G + + N LG P A + AA A Sbjct: 151 DAISDAANRMVL-------NGAKEILLFNLPDLGQNPSARSQKVVEAASHVSA------- 196 Query: 790 AGPQFFNARLKETVARLRVALPEAAFTYVDVYAATYKLMSEAKKFGFGDPLRVCCGYGG 966 + N L +L P ++ +++ + + FG D C YGG Sbjct: 197 ----YHNQLLLNLARQL---APTGMVKLFEIDKQFAEMLRDPQNFGLSDTENAC--YGG 246 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 209,777,908 Number of extensions: 4654981 Number of successful extensions: 14415 Number of sequences better than 10.0: 14 Number of HSP's gapped: 14382 Number of HSP's successfully gapped: 14 Length of query: 428 Length of database: 100,686,439 Length adjustment: 116 Effective length of query: 312 Effective length of database: 68,868,219 Effective search space: 21486884328 Effective search space used: 21486884328 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
