ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf97o02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK101471:Os04g0414100 | 121 | 4e-40 | 2 | AK061508:Os04g0414100 | 121 | 4e-40 | 3 | AK110276: | 30 | 1.5 | 4 | AK108624:Os03g0405100 | 29 | 2.6 | 5 | Os01g0937900:Os01g0937900 | 28 | 4.5 | 6 | AK105709:Os01g0826900 | 28 | 4.5 | 7 | AK072789:Os01g0826900 | 28 | 4.5 | 8 | AK119807: | 28 | 5.9 | 9 | AK107690:Os06g0548500 | 28 | 5.9 | 10 | AK105024:Os12g0577800 | 28 | 5.9 | 11 | AK102601:Os02g0592300 | 28 | 5.9 | 12 | AK073685:Os02g0592300 | 28 | 5.9 | 13 | AK068994:Os12g0577800 | 28 | 5.9 | 14 | AK106096:Os07g0608300 | 27 | 7.7 | 15 | AK073927:Os07g0608300 | 27 | 7.7 |
|---|
>AK101471:Os04g0414100 | Length = 550 Score = 121 bits (304), Expect(2) = 4e-40 Identities = 60/68 (88%), Positives = 64/68 (94%) Frame = +3 Query: 195 ENCFVLPDTVLTSSMQVLLAMGFSYMQVMEAYSIFGEDMDSMICYLVEMGGTGASADGSN 374 E CFVLPDTVLT SMQ+LLAMGF+Y+QVMEAYSIFGED+DSMI YLVEMGGTGASA GSN Sbjct: 483 EECFVLPDTVLTRSMQLLLAMGFNYIQVMEAYSIFGEDVDSMIYYLVEMGGTGASAGGSN 542 Query: 375 RRKGKAAE 398 RRKGKAAE Sbjct: 543 RRKGKAAE 550 Score = 60.8 bits (146), Expect(2) = 4e-40 Identities = 30/33 (90%), Positives = 31/33 (93%) Frame = +1 Query: 1 AEGRLYSDLELTEKEIERMVMEASRAEYLNQHR 99 AEGRLYSDLELTEKEIERMVMEASRAEYL Q + Sbjct: 415 AEGRLYSDLELTEKEIERMVMEASRAEYLKQQQ 447
>AK061508:Os04g0414100 | Length = 545 Score = 121 bits (304), Expect(2) = 4e-40 Identities = 60/68 (88%), Positives = 64/68 (94%) Frame = +3 Query: 195 ENCFVLPDTVLTSSMQVLLAMGFSYMQVMEAYSIFGEDMDSMICYLVEMGGTGASADGSN 374 E CFVLPDTVLT SMQ+LLAMGF+Y+QVMEAYSIFGED+DSMI YLVEMGGTGASA GSN Sbjct: 478 EECFVLPDTVLTRSMQLLLAMGFNYIQVMEAYSIFGEDVDSMIYYLVEMGGTGASAGGSN 537 Query: 375 RRKGKAAE 398 RRKGKAAE Sbjct: 538 RRKGKAAE 545 Score = 60.8 bits (146), Expect(2) = 4e-40 Identities = 30/33 (90%), Positives = 31/33 (93%) Frame = +1 Query: 1 AEGRLYSDLELTEKEIERMVMEASRAEYLNQHR 99 AEGRLYSDLELTEKEIERMVMEASRAEYL Q + Sbjct: 410 AEGRLYSDLELTEKEIERMVMEASRAEYLKQQQ 442
>AK110276: | Length = 845 Score = 29.6 bits (65), Expect = 1.5 Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Frame = -1 Query: 344 PHLHQVAD--HRVHVLAEYTVGFHHLHVAKAHC*KNLHAASQHGVWEYETILTASIRCRR 171 P V D HR+HV + Y + V H LH +S+ + Y+ + T R R Sbjct: 98 PRFEAVLDQLHRLHVASNYVKLLRDVDVLSQHAHTQLHTSSEAALHPYQRLRTLHTRLLR 157
>AK108624:Os03g0405100 | Length = 323 Score = 28.9 bits (63), Expect = 2.6 Identities = 13/31 (41%), Positives = 21/31 (67%) Frame = -2 Query: 436 LGSSVASRKVIYHSAAFPFRRLLPSAEAPVP 344 + SS+A+R+++ SAA RRL+P A + P Sbjct: 1 MASSLAARRLLSRSAAAASRRLVPCASSATP 31
>Os01g0937900:Os01g0937900 | Length = 158 Score = 28.1 bits (61), Expect = 4.5 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -2 Query: 193 LPLSAAAEPDD----PVIAAEEDGSAPDLDDFLKLTYAGSDTLPERPPSPSALFPSQLTP 26 LP + A PD P + DGSA A SD +P P SPS P L P Sbjct: 63 LPPAPALSPDIMPLLPSPGPDSDGSAE----------APSDVMPTIPSSPSPPNPDALLP 112 Query: 25 DQS 17 D + Sbjct: 113 DSA 115
>AK105709:Os01g0826900 | Length = 723 Score = 28.1 bits (61), Expect = 4.5 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Frame = -2 Query: 253 ARRTCMLLVSTVSG-STKQFSLPLSAAAEPDDPVIAAEEDGSA 128 +RR +LLV +++ ST SLPLSA+A D+ A+ G A Sbjct: 44 SRRDFLLLVPSIAAASTVLQSLPLSASAADDEKQAASPAPGPA 86
>AK072789:Os01g0826900 | Length = 723 Score = 28.1 bits (61), Expect = 4.5 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Frame = -2 Query: 253 ARRTCMLLVSTVSG-STKQFSLPLSAAAEPDDPVIAAEEDGSA 128 +RR +LLV +++ ST SLPLSA+A D+ A+ G A Sbjct: 44 SRRDFLLLVPSIAAASTVLQSLPLSASAADDEKQAASPAPGPA 86
>AK119807: | Length = 1272 Score = 27.7 bits (60), Expect = 5.9 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = -2 Query: 235 LLVSTVSGSTKQFSLPLSAAAEPDDPVIA 149 LL G T + ++A+AEP+DP +A Sbjct: 684 LLADDARGETPEVPAEIAASAEPEDPAVA 712
>AK107690:Os06g0548500 | Length = 230 Score = 27.7 bits (60), Expect = 5.9 Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 10/65 (15%) Frame = -1 Query: 392 SLSFPAVAAVCGGSGAP----------HLHQVADHRVHVLAEYTVGFHHLHVAKAHC*KN 243 SL + A AA CGG G L + D R HVL E G + + C + Sbjct: 6 SLRWEAAAAACGGGGRERQRRQRQYMGELKRALDARCHVLLEMPTGTGKTAASSSPCART 65 Query: 242 LHAAS 228 ++S Sbjct: 66 AGSSS 70
>AK105024:Os12g0577800 | Length = 381 Score = 27.7 bits (60), Expect = 5.9 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 19/73 (26%) Frame = -2 Query: 214 GSTKQFSLPLSAAAEPD-DPVIAAEED-----------------GSAPDLDD-FLKLTYA 92 GST+ P++AAAE + +P+I E D +AP +D+ + + + Sbjct: 89 GSTRVLGFPINAAAERNTEPLIKREADMEMHKKDDANARNLIDLNAAPSMDEPDIDVHQS 148 Query: 91 GSDTLPERPPSPS 53 T+P++P PS Sbjct: 149 EGGTVPQQPDDPS 161
>AK102601:Os02g0592300 | Length = 923 Score = 27.7 bits (60), Expect = 5.9 Identities = 16/65 (24%), Positives = 31/65 (47%) Frame = -2 Query: 241 CMLLVSTVSGSTKQFSLPLSAAAEPDDPVIAAEEDGSAPDLDDFLKLTYAGSDTLPERPP 62 C +++V K+ + + E D + +E+ SAP+ DD + T + + PE Sbjct: 345 CSFSINSVEDPGKEMDPAIDGSDE--DMCLTEKENVSAPENDDDMDETDSDDEVTPENQK 402 Query: 61 SPSAL 47 PS++ Sbjct: 403 VPSSV 407
>AK073685:Os02g0592300 | Length = 484 Score = 27.7 bits (60), Expect = 5.9 Identities = 16/65 (24%), Positives = 31/65 (47%) Frame = -2 Query: 241 CMLLVSTVSGSTKQFSLPLSAAAEPDDPVIAAEEDGSAPDLDDFLKLTYAGSDTLPERPP 62 C +++V K+ + + E D + +E+ SAP+ DD + T + + PE Sbjct: 345 CSFSINSVEDPGKEMDPAIDGSDE--DMCLTEKENVSAPENDDDMDETDSDDEVTPENQK 402 Query: 61 SPSAL 47 PS++ Sbjct: 403 VPSSV 407
>AK068994:Os12g0577800 | Length = 786 Score = 27.7 bits (60), Expect = 5.9 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 19/73 (26%) Frame = -2 Query: 214 GSTKQFSLPLSAAAEPD-DPVIAAEED-----------------GSAPDLDD-FLKLTYA 92 GST+ P++AAAE + +P+I E D +AP +D+ + + + Sbjct: 494 GSTRVLGFPINAAAERNTEPLIKREADMEMHKKDDANARNLIDLNAAPSMDEPDIDVHQS 553 Query: 91 GSDTLPERPPSPS 53 T+P++P PS Sbjct: 554 EGGTVPQQPDDPS 566
>AK106096:Os07g0608300 | Length = 320 Score = 27.3 bits (59), Expect = 7.7 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 9/45 (20%) Frame = +1 Query: 112 SHQGQGQSHLLPPQ---------LLDHLVRRQRIEAVRIVSYSQT 219 S++G G+S P Q LDHLV+R+ I+ RIV + ++ Sbjct: 115 SYRGYGESDGYPSQKGIINDAQAALDHLVQRKDIDTSRIVVFGRS 159
>AK073927:Os07g0608300 | Length = 320 Score = 27.3 bits (59), Expect = 7.7 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 9/45 (20%) Frame = +1 Query: 112 SHQGQGQSHLLPPQ---------LLDHLVRRQRIEAVRIVSYSQT 219 S++G G+S P Q LDHLV+R+ I+ RIV + ++ Sbjct: 115 SYRGYGESDGYPSQKGIINDAQAALDHLVQRKDIDTSRIVVFGRS 159 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 16,529,451 Number of extensions: 370732 Number of successful extensions: 1288 Number of sequences better than 10.0: 15 Number of HSP's gapped: 1285 Number of HSP's successfully gapped: 17 Length of query: 196 Length of database: 15,399,855 Length adjustment: 95 Effective length of query: 101 Effective length of database: 11,595,960 Effective search space: 1171191960 Effective search space used: 1171191960 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
