>Q9R037:WDR44_RAT WD repeat protein 44 - Rattus norvegicus (Rat)|
          Length = 908
 Score = 34.7 bits (78), Expect = 0.26
 Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = -2

Query: 238 MLLVSTVSGSTKQFSLPLS--AAAEPDDPVIAAEEDGSAPDLDDFLKLTYAGSDTLPERP 65
           +L  +  S ST + SLP    A+A   D ++ A+E+G APD+      T AG    P+RP
Sbjct: 278 LLTTNMASESTVRDSLPSLDLASATSGDKIVTAQENGKAPDVQ-----TVAGEVMGPQRP 332

Query: 64  PSPS 53
            S S
Sbjct: 333 RSNS 336

>Q6NVE8:WDR44_MOUSE WD repeat protein 44 - Mus musculus (Mouse)|
          Length = 915

 Score = 33.5 bits (75), Expect = 0.58
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = -2

Query: 238 MLLVSTVSGSTKQFSLPLS--AAAEPDDPVIAAEEDGSAPDLDDFLKLTYAGSDTLPERP 65
           +L  +  S +T + SLP    A+A   D ++ A+E+G APD+      T AG    P+RP
Sbjct: 288 LLTTNMASENTVRDSLPSLDLASATSGDKIVTAQENGKAPDVQ-----TVAGEVMGPQRP 342

Query: 64  PSPS 53
            S S
Sbjct: 343 RSNS 346

>Q5JSH3:WDR44_HUMAN WD repeat protein 44 - Homo sapiens (Human)|
          Length = 913

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = -2

Query: 238 MLLVSTVSGSTKQFSLPLS--AAAEPDDPVIAAEEDGSAPDLDDFLKLTYAGSDTLPERP 65
           +L  S  S ST + S P    A+A   D ++ A+E+G APD       T AG    P+RP
Sbjct: 286 LLTASMASESTVKDSQPSLDLASATSGDKIVTAQENGKAPD-----GQTVAGEVMGPQRP 340

Query: 64  PSPS 53
            S S
Sbjct: 341 RSNS 344

>Q9XSC3:WDR44_BOVIN WD repeat protein 44 - Bos taurus (Bovine)|
          Length = 912

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 24/64 (37%), Positives = 30/64 (46%)
 Frame = -2

Query: 244 TCMLLVSTVSGSTKQFSLPLSAAAEPDDPVIAAEEDGSAPDLDDFLKLTYAGSDTLPERP 65
           T M   STV  S     L   A+A   D ++ A+E+G APD       T AG    P+RP
Sbjct: 288 TNMASESTVKDSQPSLDL---ASATSGDKIVTAQENGKAPD-----GQTIAGEVMGPQRP 339

Query: 64  PSPS 53
            S S
Sbjct: 340 RSNS 343

>P53858:BNI4_YEAST Protein BNI4 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 892

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 21/73 (28%), Positives = 29/73 (39%)
 Frame = -2

Query: 250 RRTCMLLVSTVSGSTKQFSLPLSAAAEPDDPVIAAEEDGSAPDLDDFLKLTYAGSDTLPE 71
           R+   L +  + G  KQ + PL      DD    A+ D   P  D+FL L Y        
Sbjct: 424 RKPTPLNMDLILGGDKQINTPLQEHVREDDD---AKNDLQLPTKDNFLSLDYEAPSPAFS 480

Query: 70  RPPSPSALFPSQL 32
           +  +   LFP  L
Sbjct: 481 KHDTGEVLFPKFL 493

>Q7MHR2:MUTS_VIBVY DNA mismatch repair protein mutS - Vibrio vulnificus (strain YJ016)|
          Length = 853

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = +1

Query: 28  ELTEKEIERMVMEASRAEYLNQHRLTSESHQGQGQSHLLPPQLLDHLVRRQRIE 189
           +L E+E +R  ++  +  Y N H    +    +GQSHL+PP    H VRRQ ++
Sbjct: 448 KLEEEERDRHGIDTLKVGYNNVHGFYIQV--SRGQSHLVPP----HYVRRQTLK 495

>Q8DC53:MUTS_VIBVU DNA mismatch repair protein mutS - Vibrio vulnificus|
          Length = 853

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = +1

Query: 28  ELTEKEIERMVMEASRAEYLNQHRLTSESHQGQGQSHLLPPQLLDHLVRRQRIE 189
           +L E+E +R  ++  +  Y N H    +    +GQSHL+PP    H VRRQ ++
Sbjct: 448 KLEEEERDRHGIDTLKVGYNNVHGFYIQV--SRGQSHLVPP----HYVRRQTLK 495

>Q9JKD8:TBX21_MOUSE T-box transcription factor TBX21 - Mus musculus (Mouse)|
          Length = 530

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -3

Query: 555 LRVPFIHYYYYPRTRQHYIDVVLTHRGYRYFVLLIVTPDNLDPQS 421
           LRV   ++  + +  QH  ++++T +G R F  L  T   L+P S
Sbjct: 136 LRVALSNHLLWSKFNQHQTEMIITKQGRRMFPFLSFTVAGLEPTS 180

>Q810B7:SLIK5_MOUSE SLIT and NTRK-like protein 5 precursor - Mus musculus (Mouse)|
          Length = 957

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = -2

Query: 163 DPVIAAEEDGSAPDLDDF--LKLTYAGSDTLPERPPSPSALFPSQLTPDQSRV 11
           +P+  + E  S  D  D   LK+TY+ +  L ++PP P    P Q  P Q ++
Sbjct: 763 NPIYRSREGNSVEDYKDLHELKVTYSSNHHLQQQPPPPPQQ-PQQQPPPQMQM 814

>Q9UL17:TBX21_HUMAN T-box transcription factor TBX21 - Homo sapiens (Human)|
          Length = 535

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -3

Query: 555 LRVPFIHYYYYPRTRQHYIDVVLTHRGYRYFVLLIVTPDNLDPQS 421
           LRV   ++  + +  QH  ++++T +G R F  L  T   L+P S
Sbjct: 137 LRVALNNHLLWSKFNQHQTEMIITKQGRRMFPFLSFTVAGLEPTS 181

>Q28YQ7:NGLY1_DROPS Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase -|
           Drosophila pseudoobscura (Fruit fly)
          Length = 630

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -2

Query: 553 ESTFYSLLLLSPNKAALH*CRLNSQRLSLFCTPDSY 446
           E TF ++ + SPN+A L  C+LN   L   C  D+Y
Sbjct: 457 EHTFTNIFVFSPNEAELKKCQLN---LRYSCATDTY 489


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 97,528,383
Number of extensions: 2042988
Number of successful extensions: 6256
Number of sequences better than 10.0: 11
Number of HSP's gapped: 6252
Number of HSP's successfully gapped: 11
Length of query: 196
Length of database: 100,686,439
Length adjustment: 107
Effective length of query: 89
Effective length of database: 71,336,874
Effective search space: 6348981786
Effective search space used: 6348981786
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)