ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf97n18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK068961:Os04g0451700 | 67 | 1e-11 | 2 | Os06g0220900:Os06g0220900 | 47 | 9e-06 | 3 | AK063519:Os11g0705900 | 30 | 1.1 | 4 | Os01g0133900:Os01g0133900 | 30 | 1.5 | 5 | Os08g0229300:Os08g0229300 | 28 | 5.7 | 6 | AK073576:Os02g0262800 | 27 | 7.4 | 7 | AK072864:Os04g0667900 | 27 | 7.4 | 8 | AK067251:Os06g0624900 | 27 | 7.4 | 9 | AK065620:Os06g0624900 | 27 | 7.4 | 10 | AK061790:Os06g0624900 | 27 | 7.4 |
|---|
>AK068961:Os04g0451700 | Length = 89 Score = 66.6 bits (161), Expect = 1e-11 Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 10/85 (11%) Frame = +3 Query: 93 MALDCRALPQPXXXXXXXXXXX-----RPWSGDGG-----ASSSTEERERDLAMDVALLW 242 MALD RA+ P RPWSG+GG S+ +++D+ +W Sbjct: 1 MALDARAMLLPAAAEVATVDVVGDGEERPWSGNGGNGGGGGGDSSSAMVGAVSVDLPTMW 60 Query: 243 DDEGRMKRELVAWAKAVASMAIRES 317 DE RMKRELVAWAKAVASMAIRES Sbjct: 61 GDERRMKRELVAWAKAVASMAIRES 85
>Os06g0220900:Os06g0220900 | Length = 89 Score = 47.0 bits (110), Expect = 9e-06 Identities = 26/42 (61%), Positives = 33/42 (78%) Frame = +3 Query: 183 ASSSTEERERDLAMDVALLWDDEGRMKRELVAWAKAVASMAI 308 A+++TEE R +D ++W DE RMKRELVAWAKAVASMA+ Sbjct: 29 AATATEEGRRR-PVD-PMIWGDERRMKRELVAWAKAVASMAM 68
>AK063519:Os11g0705900 | Length = 642 Score = 30.0 bits (66), Expect = 1.1 Identities = 19/70 (27%), Positives = 34/70 (48%) Frame = +2 Query: 314 VHAVLSLVHARSRGNEAMEEPWIDVFF*EWVAGLHFVSSESFVHGAIGRSFRM*MFLERM 493 V V+SL H R+ +E+++E E + + + + F+HG + ++ FL R Sbjct: 463 VVVVISLCHFRNVMDESLQEDSSRSPRDEVLGNIRRMRPDVFIHGIMNGAYGATYFLTRF 522 Query: 494 EDYLNYYVFQ 523 + L YY Q Sbjct: 523 REALYYYAAQ 532
>Os01g0133900:Os01g0133900 | Length = 797 Score = 29.6 bits (65), Expect = 1.5 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = -2 Query: 380 SMVPPWLHCLCCAHAPGLAPHGLPDGHRR 294 SM PP +H C+ P +APH H R Sbjct: 6 SMAPPVIHTFTCSPNPSMAPHVTTFSHPR 34
>Os08g0229300:Os08g0229300 | Length = 254 Score = 27.7 bits (60), Expect = 5.7 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = +3 Query: 3 APRQHQPRHRSGQQRNFSAAKTXXXXXXXXMALDCRALPQ 122 APR H PRHR ++R+ S A + + R P+ Sbjct: 118 APRAHAPRHRPSRRRSRSIAASSLRRCRRRRPITARRAPR 157
>AK073576:Os02g0262800 | Length = 1394 Score = 27.3 bits (59), Expect = 7.4 Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Frame = -2 Query: 365 WLHCLCCAHAPGLA--PHGLPDGH 300 WL C CC+ A A PH +P H Sbjct: 128 WLSCFCCSSARDDADDPHDIPKSH 151
>AK072864:Os04g0667900 | Length = 276 Score = 27.3 bits (59), Expect = 7.4 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +3 Query: 276 AWAKAVASMAIRESMRC*AWCMRAAEAMKPWRN 374 +W KA+ S R + C RAA+ +PWR+ Sbjct: 34 SWTKAMGRCRYEPSPRRLSSCRRAAKNERPWRS 66
>AK067251:Os06g0624900 | Length = 253 Score = 27.3 bits (59), Expect = 7.4 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +3 Query: 168 SGDGGASSSTEERERDLAMDVALLWDDEGRMKRELVAWA 284 SGDGG+ S + A A +D GR R ++ W+ Sbjct: 177 SGDGGSGSDYDSFSPKKARRAAAGYDQLGRFDRGMIRWS 215
>AK065620:Os06g0624900 | Length = 253 Score = 27.3 bits (59), Expect = 7.4 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +3 Query: 168 SGDGGASSSTEERERDLAMDVALLWDDEGRMKRELVAWA 284 SGDGG+ S + A A +D GR R ++ W+ Sbjct: 177 SGDGGSGSDYDSFSPKKARRAAAGYDQLGRFDRGMIRWS 215
>AK061790:Os06g0624900 | Length = 251 Score = 27.3 bits (59), Expect = 7.4 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +3 Query: 168 SGDGGASSSTEERERDLAMDVALLWDDEGRMKRELVAWA 284 SGDGG+ S + A A +D GR R ++ W+ Sbjct: 175 SGDGGSGSDYDSFSPKKARRAAAGYDQLGRFDRGMIRWS 213 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 14,349,273 Number of extensions: 289951 Number of successful extensions: 859 Number of sequences better than 10.0: 10 Number of HSP's gapped: 858 Number of HSP's successfully gapped: 10 Length of query: 193 Length of database: 15,399,855 Length adjustment: 95 Effective length of query: 98 Effective length of database: 11,595,960 Effective search space: 1136404080 Effective search space used: 1136404080 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
