ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf97n18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9D956:MALD3_MOUSE MARVEL domain-containing protein 3 - Mus musc... 31 2.8

>Q9D956:MALD3_MOUSE MARVEL domain-containing protein 3 - Mus musculus (Mouse)|
          Length = 376
 Score = 31.2 bits (69), Expect = 2.8
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
 Frame = -2

Query: 470 SGMIDRLLREQRIQRKQNVA-----QRPIPK-RKHRSMVPPWLHCLCCAHAPGLAPHGLP 309
           +G   R  R+QR  R ++       QR + K R+ R+   PW      A  PG AP G  
Sbjct: 57  AGREQRTDRDQRQDRHRDAGHRASEQRALEKSRQSRARPEPWGPSWDAAPTPGPAPWGPR 116

Query: 308 DGHRRHGLG 282
           +  ++HGLG
Sbjct: 117 ELSQKHGLG 125


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 83,756,539
Number of extensions: 1565156
Number of successful extensions: 4083
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4082
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 100,686,439
Length adjustment: 107
Effective length of query: 86
Effective length of database: 71,336,874
Effective search space: 6134971164
Effective search space used: 6134971164
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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