ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf97m23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001062023.1| Oryza sativa (japonica cultivar-group) Os05g0401300 (Os05g0401300) mRNA, complete cds Length = 1032 Score = 482 bits (243), Expect = e-132 Identities = 447/515 (86%) Strand = Plus / Plus Query: 271 tgctggtcggcatcgcaaacacgaggtcgtggtcgcagtactacggcagcggcttctcca 330 |||||| ||||||||| ||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 337 tgctgggcggcatcgcgaacaccaagtcgtggtcgcagtactacggcagcggcttctcca 396 Query: 331 tccgcgtgccgccgtccttcgacgacgtcttggagcccgaggatttcagcgccgcgatga 390 ||||||| || || |||||||||||| |||||||||||||||| |||| || || ||||| Sbjct: 397 tccgcgttcccccttccttcgacgacatcttggagcccgaggagttcaacgtcgggatga 456 Query: 391 cctattatggcgacaaggccaaggtcagggcgtacgcagctcggttcgcatctccagaca 450 |||| || ||||||||||| ||| |||| | ||||| ||||| ||||| ||||| |||| Sbjct: 457 cctactacggcgacaaggcgaagcccaggacatacgctgctcgcttcgcgtctccggaca 516 Query: 451 ggtcagaacttgtaagtgtggtaatcaagccatccaatcagctcaagatcacattcctag 510 |||| ||||||||||| |||||||| |||||||| ||||||||||| ||||||||||||| Sbjct: 517 ggtctgaacttgtaagcgtggtaattaagccatcgaatcagctcaaaatcacattcctag 576 Query: 511 aggccaaagatataacggagttgggcactctaaaggaggcatccaagttatttgtacctg 570 |||||||||||||||| || |||||||| ||||||||||||| ||| |||||||||||| Sbjct: 577 aggccaaagatataacagacctgggcactttaaaggaggcatcaaagatatttgtacctg 636 Query: 571 gcagtgcaaaaatatactcagctcgaacaattaaagttaaggatcaggagggtataagga 630 | | |||||| |||||||||||||||||||||||||||||||| | || | |||||||| Sbjct: 637 gtggcgcaaaattatactcagctcgaacaattaaagttaaggatgaagatgatataagga 696 Query: 631 tgtattacttctatgaatttggttttgacaaacaacatgttgctctaatggccaccgtgg 690 |||||||| ||||| |||||| | |||||| ||||||||||| ||||||| || ||| Sbjct: 697 catattacttttatgagtttggtgtggacaaagaacatgttgctgtaatggctactgtga 756 Query: 691 atagtgggaagacatatatcgctgctgccactgctccagagacgaggtgggagacagatg 750 ||||||| ||||||||||| || | |||||||||||||||||| | |||||| |||| Sbjct: 757 atagtggaaagacatatattgccggtgccactgctccagagacaaagtgggacgatgatg 816 Query: 751 gagtgacgctgcgttcggctgctgtatctatgtct 785 | |||| | |||| ||||||||||||||| ||||| Sbjct: 817 gcgtgaagttgcgatcggctgctgtatctttgtct 851
>dbj|AK060678.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C06, full insert sequence Length = 1032 Score = 466 bits (235), Expect = e-128 Identities = 445/515 (86%) Strand = Plus / Plus Query: 271 tgctggtcggcatcgcaaacacgaggtcgtggtcgcagtactacggcagcggcttctcca 330 |||||| ||||||||| ||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 337 tgctgggcggcatcgcgaacaccaagtcgtggtcgcagtactacggcagcggcttctcca 396 Query: 331 tccgcgtgccgccgtccttcgacgacgtcttggagcccgaggatttcagcgccgcgatga 390 ||||||| || || |||||||||||| |||||||||||||||| |||| || || | ||| Sbjct: 397 tccgcgttcccccttccttcgacgacatcttggagcccgaggagttcaacgtcggggtga 456 Query: 391 cctattatggcgacaaggccaaggtcagggcgtacgcagctcggttcgcatctccagaca 450 |||| || ||||||||||| ||| |||| | ||||| ||||| ||||| ||||| |||| Sbjct: 457 cctactacggcgacaaggcgaagcccaggacatacgctgctcgcttcgcgtctccggaca 516 Query: 451 ggtcagaacttgtaagtgtggtaatcaagccatccaatcagctcaagatcacattcctag 510 |||| ||||||||||| |||||||| |||||||| ||||||||||| ||||||||||||| Sbjct: 517 ggtctgaacttgtaagcgtggtaattaagccatcgaatcagctcaaaatcacattcctag 576 Query: 511 aggccaaagatataacggagttgggcactctaaaggaggcatccaagttatttgtacctg 570 ||||||||||| |||| || |||||||| ||||||||||||| ||| |||||||||||| Sbjct: 577 aggccaaagatgtaacagacctgggcactttaaaggaggcatcaaagatatttgtacctg 636 Query: 571 gcagtgcaaaaatatactcagctcgaacaattaaagttaaggatcaggagggtataagga 630 | | |||||| |||||||||||||||||||||||||||||||| | || | |||||||| Sbjct: 637 gtggcgcaaaattatactcagctcgaacaattaaagttaaggatgaagatgatataagga 696 Query: 631 tgtattacttctatgaatttggttttgacaaacaacatgttgctctaatggccaccgtgg 690 |||||||| ||||| |||||| | |||||| ||||||||||| ||||||| || ||| Sbjct: 697 catattacttttatgagtttggtgtggacaaagaacatgttgctgtaatggctactgtga 756 Query: 691 atagtgggaagacatatatcgctgctgccactgctccagagacgaggtgggagacagatg 750 ||||||| ||||||||||| || | |||||||||||||||||| | |||||| |||| Sbjct: 757 atagtggaaagacatatattgccggtgccactgctccagagacaaagtgggacgatgatg 816 Query: 751 gagtgacgctgcgttcggctgctgtatctatgtct 785 | |||| | |||| ||||||||||||||| ||||| Sbjct: 817 gcgtgaagttgcgatcggctgctgtatctttgtct 851
>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16, complete sequence Length = 170233 Score = 139 bits (70), Expect = 2e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 271 tgctggtcggcatcgcaaacacgaggtcgtggtcgcagtactacggcagcggcttctcca 330 |||||| ||||||||| ||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 73742 tgctgggcggcatcgcgaacaccaagtcgtggtcgcagtactacggcagcggcttctcca 73801 Query: 331 tccgcgtgccgccgtccttcgacgacgtcttggagcccgagg 372 ||||||| || || |||||||||||| ||||||||||||||| Sbjct: 73802 tccgcgttcccccttccttcgacgacatcttggagcccgagg 73843 Score = 89.7 bits (45), Expect = 2e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 449 caggtcagaacttgtaagtgtggtaatcaagccatccaatcagctcaagatcacattcct 508 |||||| ||||||||||| |||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 74234 caggtctgaacttgtaagcgtggtaattaagccatcgaatcagctcaaaatcacattcct 74293 Query: 509 agagg 513 ||||| Sbjct: 74294 agagg 74298 Score = 73.8 bits (37), Expect = 1e-09 Identities = 55/61 (90%) Strand = Plus / Plus Query: 511 aggccaaagatataacggagttgggcactctaaaggaggcatccaagttatttgtacctg 570 |||||||||||||||| || |||||||| ||||||||||||| ||| |||||||||||| Sbjct: 75066 aggccaaagatataacagacctgggcactttaaaggaggcatcaaagatatttgtacctg 75125 Query: 571 g 571 | Sbjct: 75126 g 75126 Score = 69.9 bits (35), Expect = 2e-08 Identities = 38/39 (97%) Strand = Plus / Plus Query: 576 gcaaaaatatactcagctcgaacaattaaagttaaggat 614 |||||| |||||||||||||||||||||||||||||||| Sbjct: 75749 gcaaaattatactcagctcgaacaattaaagttaaggat 75787 Score = 60.0 bits (30), Expect = 2e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 700 agacatatatcgctgctgccactgctccagagacgaggtgggagacagatggagtgacgc 759 |||||||||| || | |||||||||||||||||| | |||||| ||||| |||| | Sbjct: 76254 agacatatattgccggtgccactgctccagagacaaagtgggacgatgatggcgtgaagt 76313 Query: 760 tgcgttcggctgctgtatctatgtct 785 |||| ||||||||||||||| ||||| Sbjct: 76314 tgcgatcggctgctgtatctttgtct 76339 Score = 58.0 bits (29), Expect = 7e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 633 tattacttctatgaatttggttttgacaaacaacatgttgctctaatggccaccgtggat 692 |||||||| ||||| |||||| | |||||| ||||||||||| ||||||| || ||| || Sbjct: 75933 tattacttttatgagtttggtgtggacaaagaacatgttgctgtaatggctactgtgaat 75992 Query: 693 agtgg 697 ||||| Sbjct: 75993 agtgg 75997 Score = 48.1 bits (24), Expect = 0.066 Identities = 57/68 (83%) Strand = Plus / Plus Query: 386 gatgacctattatggcgacaaggccaaggtcagggcgtacgcagctcggttcgcatctcc 445 ||||||||| || ||||||||||| ||| |||| | ||||| ||||| ||||| ||||| Sbjct: 73974 gatgacctactacggcgacaaggcgaagcccaggacatacgctgctcgcttcgcgtctcc 74033 Query: 446 agacaggt 453 ||||||| Sbjct: 74034 ggacaggt 74041
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 139 bits (70), Expect = 2e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 271 tgctggtcggcatcgcaaacacgaggtcgtggtcgcagtactacggcagcggcttctcca 330 |||||| ||||||||| ||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 19370393 tgctgggcggcatcgcgaacaccaagtcgtggtcgcagtactacggcagcggcttctcca 19370452 Query: 331 tccgcgtgccgccgtccttcgacgacgtcttggagcccgagg 372 ||||||| || || |||||||||||| ||||||||||||||| Sbjct: 19370453 tccgcgttcccccttccttcgacgacatcttggagcccgagg 19370494 Score = 89.7 bits (45), Expect = 2e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 449 caggtcagaacttgtaagtgtggtaatcaagccatccaatcagctcaagatcacattcct 508 |||||| ||||||||||| |||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 19370885 caggtctgaacttgtaagcgtggtaattaagccatcgaatcagctcaaaatcacattcct 19370944 Query: 509 agagg 513 ||||| Sbjct: 19370945 agagg 19370949 Score = 73.8 bits (37), Expect = 1e-09 Identities = 55/61 (90%) Strand = Plus / Plus Query: 511 aggccaaagatataacggagttgggcactctaaaggaggcatccaagttatttgtacctg 570 |||||||||||||||| || |||||||| ||||||||||||| ||| |||||||||||| Sbjct: 19371717 aggccaaagatataacagacctgggcactttaaaggaggcatcaaagatatttgtacctg 19371776 Query: 571 g 571 | Sbjct: 19371777 g 19371777 Score = 69.9 bits (35), Expect = 2e-08 Identities = 38/39 (97%) Strand = Plus / Plus Query: 576 gcaaaaatatactcagctcgaacaattaaagttaaggat 614 |||||| |||||||||||||||||||||||||||||||| Sbjct: 19372400 gcaaaattatactcagctcgaacaattaaagttaaggat 19372438 Score = 60.0 bits (30), Expect = 2e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 700 agacatatatcgctgctgccactgctccagagacgaggtgggagacagatggagtgacgc 759 |||||||||| || | |||||||||||||||||| | |||||| ||||| |||| | Sbjct: 19372905 agacatatattgccggtgccactgctccagagacaaagtgggacgatgatggcgtgaagt 19372964 Query: 760 tgcgttcggctgctgtatctatgtct 785 |||| ||||||||||||||| ||||| Sbjct: 19372965 tgcgatcggctgctgtatctttgtct 19372990 Score = 58.0 bits (29), Expect = 7e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 633 tattacttctatgaatttggttttgacaaacaacatgttgctctaatggccaccgtggat 692 |||||||| ||||| |||||| | |||||| ||||||||||| ||||||| || ||| || Sbjct: 19372584 tattacttttatgagtttggtgtggacaaagaacatgttgctgtaatggctactgtgaat 19372643 Query: 693 agtgg 697 ||||| Sbjct: 19372644 agtgg 19372648 Score = 48.1 bits (24), Expect = 0.066 Identities = 57/68 (83%) Strand = Plus / Plus Query: 386 gatgacctattatggcgacaaggccaaggtcagggcgtacgcagctcggttcgcatctcc 445 ||||||||| || ||||||||||| ||| |||| | ||||| ||||| ||||| ||||| Sbjct: 19370625 gatgacctactacggcgacaaggcgaagcccaggacatacgctgctcgcttcgcgtctcc 19370684 Query: 446 agacaggt 453 ||||||| Sbjct: 19370685 ggacaggt 19370692 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ccgccctcctccccctcgtcccttc 46 |||||||||||| |||||||||||| Sbjct: 25195586 ccgccctcctccgcctcgtcccttc 25195562
>gb|AY596298.1| Haloarcula marismortui ATCC 43049 chromosome II, complete sequence Length = 288050 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 897 actcccagtccagcgcccgctc 918 |||||||||||||||||||||| Sbjct: 146484 actcccagtccagcgcccgctc 146505
>gb|AC024859.1| Caenorhabditis elegans cosmid Y71H2AM, complete sequence Length = 143786 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 147 gcctccgttgccgcctccgccg 168 |||||||||||||||||||||| Sbjct: 79649 gcctccgttgccgcctccgccg 79670
>ref|NM_065214.3| Caenorhabditis elegans Y71H2AM.19 (Y71H2AM.19) mRNA, complete cds Length = 1967 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 gcctccgttgccgcctccgccg 168 |||||||||||||||||||||| Sbjct: 1841 gcctccgttgccgcctccgccg 1820
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 829 tcattatatattagaactgcgg 850 |||||||||||||||||||||| Sbjct: 1255727 tcattatatattagaactgcgg 1255706
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 152 cgttgccgcctccgccgcagcc 173 |||||||||||||||||||||| Sbjct: 2430677 cgttgccgcctccgccgcagcc 2430698
>dbj|AB018798.1| Plasmodium yoelii gene for P-Type ATPase, complete cds Length = 7852 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 820 caactattatcattatatatta 841 |||||||||||||||||||||| Sbjct: 24 caactattatcattatatatta 45
>gb|AC166602.2| Eulemur macaco macaco clone CH273-138L3, complete sequence Length = 172515 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1037 caagttaaaattggatcaaag 1057 ||||||||||||||||||||| Sbjct: 13670 caagttaaaattggatcaaag 13690
>ref|NM_001062557.1| Oryza sativa (japonica cultivar-group) Os05g0512500 (Os05g0512500) mRNA, complete cds Length = 691 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ccgccctcctccccctcgtcccttc 46 |||||||||||| |||||||||||| Sbjct: 148 ccgccctcctccgcctcgtcccttc 172
>gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07, complete sequence Length = 146712 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ccgccctcctccccctcgtcccttc 46 |||||||||||| |||||||||||| Sbjct: 58427 ccgccctcctccgcctcgtcccttc 58403
>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11, complete sequence Length = 162772 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 ccgccctcctccccctcgtcccttc 46 |||||||||||| |||||||||||| Sbjct: 138241 ccgccctcctccgcctcgtcccttc 138217
>gb|AC087160.2| Sus scrofa clone RP44-418J7, complete sequence Length = 166651 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1037 caagttaaaattggatcaaag 1057 ||||||||||||||||||||| Sbjct: 72647 caagttaaaattggatcaaag 72667
>gb|AC140134.2| Homo sapiens chromosome 5 clone RP11-1319K7, complete sequence Length = 217820 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 821 aactattatcattatatatta 841 ||||||||||||||||||||| Sbjct: 89736 aactattatcattatatatta 89716
>gb|AC142324.1| Pan troglodytes BAC clone RP43-73K6 from 7, complete sequence Length = 178050 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 824 tattatcattatatattagaa 844 ||||||||||||||||||||| Sbjct: 124035 tattatcattatatattagaa 124015
>gb|AC139778.2| Homo sapiens chromosome 5 clone RP11-1012N14, complete sequence Length = 180014 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 821 aactattatcattatatatta 841 ||||||||||||||||||||| Sbjct: 137781 aactattatcattatatatta 137801
>gb|AC139277.2| Homo sapiens chromosome 5 clone RP11-619K7, complete sequence Length = 199996 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 821 aactattatcattatatatta 841 ||||||||||||||||||||| Sbjct: 183528 aactattatcattatatatta 183508
>gb|AC160145.6| Mus musculus 10 BAC RP24-160D12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 155235 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1028 tgaagtcttcaagttaaaattggat 1052 ||||||||||||||||||| ||||| Sbjct: 6689 tgaagtcttcaagttaaaaatggat 6665
>gb|AC132139.4| Mus musculus BAC clone RP23-181A24 from chromosome 10, complete sequence Length = 206712 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1028 tgaagtcttcaagttaaaattggat 1052 ||||||||||||||||||| ||||| Sbjct: 38649 tgaagtcttcaagttaaaaatggat 38673
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 cctcctccccctcgtcccttc 46 ||||||||||||||||||||| Sbjct: 5290078 cctcctccccctcgtcccttc 5290098
>gb|AC138559.3| Lemur catta clone LB2-251E18, complete sequence Length = 171058 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1037 caagttaaaattggatcaaag 1057 ||||||||||||||||||||| Sbjct: 117775 caagttaaaattggatcaaag 117795
>gb|AC010217.6| Homo sapiens chromosome 5 clone CTC-202F24, complete sequence Length = 169137 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 821 aactattatcattatatatta 841 ||||||||||||||||||||| Sbjct: 63907 aactattatcattatatatta 63927
>gb|AC016554.8| Homo sapiens chromosome 5 clone CTC-340H12, complete sequence Length = 113213 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 821 aactattatcattatatatta 841 ||||||||||||||||||||| Sbjct: 61681 aactattatcattatatatta 61661
>gb|AC022119.4|AC022119 Homo sapiens chromosome 5 clone CTC-566F17, complete sequence Length = 155974 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 821 aactattatcattatatatta 841 ||||||||||||||||||||| Sbjct: 22775 aactattatcattatatatta 22755
>gb|AC139834.2| Homo sapiens chromosome 5 clone RP11-974F13, complete sequence Length = 185457 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 821 aactattatcattatatatta 841 ||||||||||||||||||||| Sbjct: 152551 aactattatcattatatatta 152531
>gb|AC139494.2| Homo sapiens chromosome 5 clone RP11-846E15, complete sequence Length = 210288 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 821 aactattatcattatatatta 841 ||||||||||||||||||||| Sbjct: 94820 aactattatcattatatatta 94800
>dbj|AP006155.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1012G04 Length = 144644 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 cctcctccccctcgtcccttc 46 ||||||||||||||||||||| Sbjct: 125018 cctcctccccctcgtcccttc 125038
>dbj|AP005739.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0012A04 Length = 150317 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 cctcctccccctcgtcccttc 46 ||||||||||||||||||||| Sbjct: 86791 cctcctccccctcgtcccttc 86811
>dbj|AK062441.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-A12, full insert sequence Length = 691 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 ccgccctcctccccctcgtcccttc 46 |||||||||||| |||||||||||| Sbjct: 148 ccgccctcctccgcctcgtcccttc 172
>gb|AC004999.1|AC004999 Homo sapiens PAC clone RP1-215P15 from 5q12, complete sequence Length = 129541 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 821 aactattatcattatatatta 841 ||||||||||||||||||||| Sbjct: 74815 aactattatcattatatatta 74835
>emb|AL672307.9| Mouse DNA sequence from clone RP23-141N2 on chromosome 2, complete sequence Length = 206168 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 649 ttggttttgacaaacaacatgttgc 673 ||||||||||| ||||||||||||| Sbjct: 184425 ttggttttgaccaacaacatgttgc 184449 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 176,073,821 Number of extensions: 9116128 Number of successful extensions: 242894 Number of sequences better than 10.0: 33 Number of HSP's gapped: 242890 Number of HSP's successfully gapped: 46 Length of query: 1073 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1050 Effective length of database: 18,503,978,556 Effective search space: 19429177483800 Effective search space used: 19429177483800 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
