ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf95j22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os01g0790900:Os01g0790900 43 0.002
2Os07g0638600:Os07g0638600 33 1.2
3AK110069: 33 1.2
4AK073540:Os01g0836400 33 1.2
5AK106670:Os02g0524800 33 1.6
6AK106651:Os06g0659400 33 1.6
7AK070642:Os03g0123300 33 1.6
8Os06g0478200:Os06g0478200 32 2.1
9AK106363:Os09g0270900 32 2.1
10Os03g0717300:Os03g0717300 32 3.6
11Os01g0290600:Os01g0290600 32 3.6
12AK120368:Os03g0399700 32 3.6
13Os05g0433200:Os05g0433200 31 4.7
14AK121560:Os02g0282900 31 4.7
15AK103219:Os02g0638900 31 4.7
16Os06g0638500:Os06g0638500 31 6.2
17AK105224:Os12g0459300 31 6.2
18AK101617:Os03g0166800 31 6.2
19AK100637:Os03g0166800 31 6.2
20AK073993:Os03g0618900 31 6.2
21AK059827:Os03g0187000 31 6.2
22AK110094: 30 8.1
23AK121896:Os01g0745700 30 8.1
24AK102840:Os01g0206200 30 8.1
25AK102444:Os01g0954500 30 8.1
26AK064720:Os04g0386300 30 8.1

>Os01g0790900:Os01g0790900 |
          Length = 1546
 Score = 42.7 bits (99), Expect = 0.002
 Identities = 21/26 (80%), Positives = 21/26 (80%)
 Frame = +3

Query: 2121 SPSQPRLTEPDLLRGESGAY*STLES 2198
            S   PRLTEPDL RGESGAY STLES
Sbjct: 422  SIGHPRLTEPDLFRGESGAYRSTLES 447



to top

>Os07g0638600:Os07g0638600 |
          Length = 340

 Score = 33.1 bits (74), Expect = 1.2
 Identities = 28/81 (34%), Positives = 37/81 (45%)
 Frame = +2

Query: 347 EARRLPDPTPSPTRYACAAAPRLSGIPSLAGLCFHPVLTFPGLARDSFCPGYGSRTVRCR 526
           +A  L DPTP     A AAAP  +GIP+L+   F  V+     A +  CPG  S      
Sbjct: 87  DASVLLDPTP-----ASAAAPEKAGIPNLSLRGFE-VIDAAKAALEGECPGVVSCADVVA 140

Query: 527 LAGQSARLLADSHYMAASAPA 589
            AG+ A  L   + +    PA
Sbjct: 141 FAGRDAAYLLSGNKVYFDMPA 161



to top

>AK110069: |
          Length = 788

 Score = 33.1 bits (74), Expect = 1.2
 Identities = 34/125 (27%), Positives = 48/125 (38%)
 Frame = +2

Query: 140 VSSANRPSPAPHASGSPRASFSLVARVLSIRLYPSVPAAKPGGSALCCERLGFQPELRGS 319
           V + + P+PAP AS  P   +    +  S  +   VP+A P  S          PE   S
Sbjct: 156 VPTPSAPAPAPPAS-VPGNGYGTPEKPSSAPV--EVPSASPSASTEA------SPEQPSS 206

Query: 320 GAPGGWRLREARRLPDPTPSPTRYACAAAPRLSGIPSLAGLCFHPVLTFPGLARDSFCPG 499
            AP G             P+P+  A    P   G+P+ +G    P  + P  A  +  PG
Sbjct: 207 SAPAG------------VPTPSAPAEVPTPSAPGVPTPSGPAGVPTPSAPAPAPPASVPG 254

Query: 500 YGSRT 514
            G  T
Sbjct: 255 NGYGT 259



to top

>AK073540:Os01g0836400 |
          Length = 914

 Score = 33.1 bits (74), Expect = 1.2
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +1

Query: 334 MAAQGGEAAAGSDPKP 381
           MAAQGGEAAAGSD KP
Sbjct: 1   MAAQGGEAAAGSDAKP 16



to top

>AK106670:Os02g0524800 |
          Length = 215

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = +2

Query: 281 CERLGFQPELRGSGAPGGWRLREARRLPDPTP 376
           C   G +  LRG G  G  RL   RR+P PTP
Sbjct: 72  CAAAGHRRWLRGYGESGSSRLHHGRRVPQPTP 103



to top

>AK106651:Os06g0659400 |
          Length = 463

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = -3

Query: 1929 RFTWAESPSPSLIGEWDPIVIPTPSLSIPLLGVWTPPPSESTVVPIA 1789
            R  W    SP L    DP   P P L++PL  + TPPP   + +P+A
Sbjct: 45   RLDWLPPLSP-LPRTPDPSTPPPPPLTLPLAPLTTPPPPPPSTLPMA 90



to top

>AK070642:Os03g0123300 |
          Length = 523

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 28/102 (27%), Positives = 43/102 (42%)
 Frame = +2

Query: 134 PRVSSANRPSPAPHASGSPRASFSLVARVLSIRLYPSVPAAKPGGSALCCERLGFQPELR 313
           P  +SA+   P P ++ S R + +  +RV S   +PS  ++ P  ++       F P   
Sbjct: 16  PMENSASSKPPTPASTPSSRLAAAPSSRVSSAAPHPSPSSSAPTPASRTVYSDRFIPSRA 75

Query: 314 GSGAPGGWRLREARRLPDPTPSPTRYACAAAPRLSGIPSLAG 439
           GS             L D  PSP+ +  AAA    G P  +G
Sbjct: 76  GSNL----------ALFDLAPSPSHHDAAAAAASPGAPPPSG 107



to top

>Os06g0478200:Os06g0478200 |
          Length = 1349

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 33/93 (35%), Positives = 38/93 (40%)
 Frame = +2

Query: 317 SGAPGGWRLREARRLPDPTPSPTRYACAAAPRLSGIPSLAGLCFHPVLTFPGLARDSFCP 496
           SG P G R       P P+PSPTR      P LSG P             P   R +   
Sbjct: 704 SGRPSGAR-------PGPSPSPTR--SLGGPTLSGPPPAQ----------PPSTRSA--G 742

Query: 497 GYGSRTVRCRLAGQSARLLADSHYMAASAPAPS 595
             GS T R   +   ARL  DS  +A+ APA S
Sbjct: 743 SLGSTTPRPDSSPAPARLAHDSARLASPAPAVS 775



to top

>AK106363:Os09g0270900 |
          Length = 366

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
 Frame = +1

Query: 58  SQTPIHSAAPHNTSLHQAAAGPAESPPRLLGQSPLARPT---RLRFPACLIFACRARPVD 228
           S TP  SAA    +   +   PA+ PP L     L +     R R+   L +A R  P+D
Sbjct: 48  SPTPSPSAAAAAAAASGSGVDPAQLPPALRDIVALFQSVPDPRTRYKQLLAYAARLPPMD 107

Query: 229 PAL 237
           PAL
Sbjct: 108 PAL 110



to top

>Os03g0717300:Os03g0717300 |
          Length = 160

 Score = 31.6 bits (70), Expect = 3.6
 Identities = 29/91 (31%), Positives = 37/91 (40%)
 Frame = +2

Query: 146 SANRPSPAPHASGSPRASFSLVARVLSIRLYPSVPAAKPGGSALCCERLGFQPELRGSGA 325
           SA+ PSP+  +SGS  +S S      S R  P  P   P  S   C           S  
Sbjct: 58  SASSPSPSSASSGSSASSPSGSRAPTSARAPPPPPPTSPPASPSSCS---------PSAP 108

Query: 326 PGGWRLREARRLPDPTPSPTRYACAAAPRLS 418
           P   R   +RR P P P P R + + +P  S
Sbjct: 109 P---RRDSSRRAPPPRP-PARPSSSTSPASS 135



to top

>Os01g0290600:Os01g0290600 |
          Length = 500

 Score = 31.6 bits (70), Expect = 3.6
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
 Frame = +2

Query: 1931 DLQQDNYGSKIASW---PRSTGLIQSPERDLEVLLLYQTTLGSTHLQSVPLSSVWPDVGG 2101
            D+  D Y S +  W   P +   I + + D     L+   + S +   +P+ S W  V  
Sbjct: 258  DIGADFYASNLHKWFFCPSAVAFIHTRKDDPVSSKLHHPVVSSEYGNGLPMESAWIGVRD 317

Query: 2102 FSC*LVIP 2125
            +S  LV+P
Sbjct: 318  YSAQLVVP 325



to top

>AK120368:Os03g0399700 |
          Length = 174

 Score = 31.6 bits (70), Expect = 3.6
 Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -3

Query: 189 GEPEACGAGEGRLAEETRGRFCWPGSGLVERS-VVGGGGVDW 67
           GE    GA  GR     R    W G G VER  +V GGG  W
Sbjct: 70  GEARGAGAVWGRRRRFVRDGCWWRGGGAVERRLIVDGGGAVW 111



to top

>Os05g0433200:Os05g0433200 |
          Length = 177

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 32/93 (34%), Positives = 37/93 (39%), Gaps = 4/93 (4%)
 Frame = -3

Query: 333 PPGAPEPRSSG*NPSRSQQRAEPPGFAAGTDG*SRIDRTRATSENEARGE----PEACGA 166
           P GAP PR  G  P+R  +     G     DG S  D   A S   A G     P+  G 
Sbjct: 8   PDGAPSPRVDG-GPARGARLTTRRG-----DGGS--DAAAAGSGLPAVGSGGSTPDLAGG 59

Query: 165 GEGRLAEETRGRFCWPGSGLVERSVVGGGGVDW 67
           G  RLA   +G    P +    R   GGGG  W
Sbjct: 60  GGWRLAAAGKGGRRVPRTRWRRRGHGGGGGGGW 92



to top

>AK121560:Os02g0282900 |
          Length = 608

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 20/69 (28%), Positives = 31/69 (44%)
 Frame = -1

Query: 1508 EPIFQCYVYTCKRCVSAARTRCSHNKSRNCDKVRGRQTCFKDSKHVFKLGKSPT*VVFLI 1329
            E I +   Y C R  +  +TRC         K+   +  F DS+ +  LG++ T     I
Sbjct: 342  EEIVEGQTYQCYRYPTMTKTRCGF-------KLSVTEGSFNDSQIIVMLGENGTGKTTFI 394

Query: 1328 RIGGGSIKP 1302
            R+  G +KP
Sbjct: 395  RMLAGRVKP 403



to top

>AK103219:Os02g0638900 |
          Length = 329

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 21/82 (25%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
 Frame = -2

Query: 1729 NFLNHRIQITIHIRATRWSQLRVSSIDR*S*QSIPASKLQILLDLGNN*LQHRLSDTYSI 1550
            N L H+ QI +HI+  + SQ +++ I     Q +P S  ++++   ++  + R+ D++ +
Sbjct: 96   NMLKHKKQIDLHIKKRKSSQKKITGI-----QFVPGSSSKVIITSADS--RIRVIDSFEL 148

Query: 1549 LIRS*IRGF--IHSSLSPSSSV 1490
            + +   +GF   +S +S  S+V
Sbjct: 149  VCK--FKGFRNTNSQISACSAV 168



to top

>Os06g0638500:Os06g0638500 |
          Length = 876

 Score = 30.8 bits (68), Expect = 6.2
 Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 10/78 (12%)
 Frame = +1

Query: 64  TPIHSAAPHNTSLHQAAAGPAESPPRLL---GQSPLARPTRLRFPACLIFACRARPV--- 225
           TP H +  H+   HQAAA P  +P  L+   G   L   T L+  A ++ A  +  V   
Sbjct: 500 TPQHHSKKHDHPHHQAAAAP-PAPATLVTVDGDGELEMETLLKASAYILGATGSSIVYKA 558

Query: 226 ----DPALPVRTSGETGG 267
                 AL VR  GE+GG
Sbjct: 559 VLADGTALAVRRIGESGG 576



to top

>AK105224:Os12g0459300 |
          Length = 122

 Score = 30.8 bits (68), Expect = 6.2
 Identities = 20/59 (33%), Positives = 23/59 (38%)
 Frame = +2

Query: 359 LPDPTPSPTRYACAAAPRLSGIPSLAGLCFHPVLTFPGLARDSFCPGYGSRTVRCRLAG 535
           LP P+ S +R     A R  GIPS       P   F   +  S C   G R  R R  G
Sbjct: 20  LPSPSSSCSRRGAHQALRQDGIPSATCCLAPPSFPFSSASSSSVCGNSGGRPRRRRRRG 78



to top

>AK101617:Os03g0166800 |
          Length = 480

 Score = 30.8 bits (68), Expect = 6.2
 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
 Frame = +2

Query: 128 NLPRVSSANRPSPAPHASGSPRASFSLVARVLSIRLYPSVPAAKPGGSALCCERLGFQPE 307
           N+ + SS N      + +G+ + S      V   R Y   P A   G AL  E +    E
Sbjct: 21  NIGQSSSVNNGPTPVYPTGTEKNSGETWFEVGRSRTY--TPTADDIGHALRFECVAVDSE 78

Query: 308 LRGS-GAPGGWRLREARRLPDPTPSPTR 388
            R S GAP    +  +R +P PTP+P R
Sbjct: 79  TRSSVGAPTS--IMTSRVIPAPTPTPRR 104



to top

>AK100637:Os03g0166800 |
          Length = 607

 Score = 30.8 bits (68), Expect = 6.2
 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
 Frame = +2

Query: 128 NLPRVSSANRPSPAPHASGSPRASFSLVARVLSIRLYPSVPAAKPGGSALCCERLGFQPE 307
           N+ + SS N      + +G+ + S      V   R Y   P A   G AL  E +    E
Sbjct: 148 NIGQSSSVNNGPTPVYPTGTEKNSGETWFEVGRSRTY--TPTADDIGHALRFECVAVDSE 205

Query: 308 LRGS-GAPGGWRLREARRLPDPTPSPTR 388
            R S GAP    +  +R +P PTP+P R
Sbjct: 206 TRSSVGAPTS--IMTSRVIPAPTPTPRR 231



to top

>AK073993:Os03g0618900 |
          Length = 271

 Score = 30.8 bits (68), Expect = 6.2
 Identities = 25/81 (30%), Positives = 35/81 (43%)
 Frame = +2

Query: 128 NLPRVSSANRPSPAPHASGSPRASFSLVARVLSIRLYPSVPAAKPGGSALCCERLGFQPE 307
           +LPR  +   P  +P ++ SP      VA V   R +PS P   P  ++      G + E
Sbjct: 140 SLPRRRARLPPPGSPRSAPSPSRQRRRVAVVTPRRRHPSSPHGCPATNS-----DGGETE 194

Query: 308 LRGSGAPGGWRLREARRLPDP 370
               G  GGWR R     P+P
Sbjct: 195 ---RGEEGGWRRRRLGFAPEP 212



to top

>AK059827:Os03g0187000 |
          Length = 232

 Score = 30.8 bits (68), Expect = 6.2
 Identities = 22/64 (34%), Positives = 30/64 (46%)
 Frame = -3

Query: 324 APEPRSSG*NPSRSQQRAEPPGFAAGTDG*SRIDRTRATSENEARGEPEACGAGEGRLAE 145
           A EP ++  NPS+ ++R E    AAG  G        A  + +  GE EA GA +    E
Sbjct: 19  AAEPAAA--NPSQKREREEGDDSAAGAAG-EEAAEGAAAKKQKVEGEGEAKGAEDEAKGE 75

Query: 144 ETRG 133
           E  G
Sbjct: 76  EEEG 79



to top

>AK110094: |
          Length = 906

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 21/71 (29%), Positives = 32/71 (45%)
 Frame = +2

Query: 122 QQNLPRVSSANRPSPAPHASGSPRASFSLVARVLSIRLYPSVPAAKPGGSALCCERLGFQ 301
           ++++ + S+ +  +PAPHAS  P  +    AR   I      PA +  G A      G +
Sbjct: 87  KKHVKKESNVHHAAPAPHASAPPTTTAPHAARGNHI----GAPAGRGRGGASVRGARGGR 142

Query: 302 PELRGSGAPGG 334
              RG G  GG
Sbjct: 143 GGFRGVGGRGG 153



to top

>AK121896:Os01g0745700 |
          Length = 387

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 10/96 (10%)
 Frame = +2

Query: 179 SGSPRASFSLVARVLSIRLYPSVPA-AKPGGSALCCERLGFQPEL---------RGSGAP 328
           SG P   FS  +        PS  A A    +++  +  GF PE          R   AP
Sbjct: 130 SGIPSGGFSTAS-------VPSAQAQAASAAASMAVQPGGFLPEAPVPAKARSKRSRAAP 182

Query: 329 GGWRLREARRLPDPTPSPTRYACAAAPRLSGIPSLA 436
           G W  R     P P   P+  + A +P  SG+ + A
Sbjct: 183 GNWSSRLLVLPPPPASPPSPASMAISPAESGVSAHA 218



to top

>AK102840:Os01g0206200 |
          Length = 197

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +1

Query: 133 PPRLLGQSPLARPTRLRFPACLIFACRARPVDPA 234
           PPR    S  A P   R+PA    +CR RP+DPA
Sbjct: 27  PPRSAPPSAAATPPLRRWPA----SCRTRPLDPA 56



to top

>AK102444:Os01g0954500 |
          Length = 340

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -1

Query: 1481 TCKRCVSAARTRCSHNKSRNCDKVRGRQTCFKDSKHV 1371
            TC+ C + A+  C H + R C K RG    F  S HV
Sbjct: 114  TCQDCGNQAKKDCGHQRCRTCCKSRG----FDCSTHV 146



to top

>AK064720:Os04g0386300 |
          Length = 169

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 25/88 (28%), Positives = 30/88 (34%), Gaps = 6/88 (6%)
 Frame = +1

Query: 208 CRARPVDPALPVRTS----GETGGLCXXXXXXXXXXXXPGLRSAGRMAAQGGEAA--AGS 369
           C  RP  P    R +    G  GG              PG+R AG     GG  A  AG 
Sbjct: 36  CSRRPPPPPRRHRAAAAGGGRAGGEAADGGPDEAGVGAPGVRGAGEGDGAGGAGARGAGV 95

Query: 370 DPKPNEVCLRRRSSSLRNPELGGPLLPP 453
             +P ++  R R    R    G    PP
Sbjct: 96  RARPGDLGARPRGGGARRAHEGDRRPPP 123


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 91,885,308
Number of extensions: 2177865
Number of successful extensions: 6338
Number of sequences better than 10.0: 26
Number of HSP's gapped: 6299
Number of HSP's successfully gapped: 26
Length of query: 1061
Length of database: 15,399,855
Length adjustment: 111
Effective length of query: 950
Effective length of database: 10,955,304
Effective search space: 10407538800
Effective search space used: 10407538800
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top