>P29128:ICP0_BHV1J Trans-acting transcriptional protein ICP0 - Bovine herpesvirus 1.1|
           (strain Jura) (BoHV-1) (Infectious bovine
           rhinotracheitis virus)
          Length = 676
 Score = 37.4 bits (85), Expect = 0.40
 Identities = 37/134 (27%), Positives = 51/134 (38%), Gaps = 27/134 (20%)
 Frame = +2

Query: 119 GQQNLPRVSSANR--------PSPAPHASGSPRASFSLVARVLSIRLYPS--VPAAKPG- 265
           G+   PRV +  R        P+PAP  + +P    +++    +    P+   PAA PG 
Sbjct: 452 GEAGPPRVQARRRRRTELDRAPTPAPAPAPAPAPISTVIDLTANAPARPADPAPAAAPGP 511

Query: 266 ----------GSALCCERLGFQPELRGSGAPG------GWRLREARRLPDPTPSPTRYAC 397
                      +A         P +  S AP             A     PTPSP   A 
Sbjct: 512 ASAGAQIGTPAAAAAVTAAAAAPSVARSSAPSPAVTAAATSTAAAISTRAPTPSPAGRAP 571

Query: 398 AAAPRLSGIPSLAG 439
           AA PR +G P+LAG
Sbjct: 572 AADPRRAGAPALAG 585

>Q8VDN4:CCD92_MOUSE Coiled-coil domain-containing protein 92 - Mus musculus (Mouse)|
          Length = 314

 Score = 35.0 bits (79), Expect = 2.0
 Identities = 23/69 (33%), Positives = 36/69 (52%)
 Frame = -2

Query: 1180 VPDPSLILLHRLRSESSSTKIRVMPIYKLPLASDNISYKKLVTIHCPDR*S*HKTAVHLK 1001
            +PDP+  LL R   ES+  +++  P+   P+ASD  +  +    H P R   HKT V + 
Sbjct: 223  MPDPTPFLLAR---ESAEVQLKERPLVIPPIASDRSATGQ----HSPARDKPHKTHVGVA 275

Query: 1000 HHSYHDSSS 974
            H  +H + S
Sbjct: 276  HRIHHATPS 284

>P29836:ICP0_BHV1K Trans-acting transcriptional protein ICP0 - Bovine herpesvirus 1.2|
           (strain K22) (BoHV-1) (Infectious bovine rhinotracheitis
           virus)
          Length = 676

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
 Frame = +2

Query: 146 SANRPS----PAPHASGSPRASFSLVARVLSIRLYPSVPAAKPGGSALCCERLGFQPELR 313
           +AN P+    PAP A+  P  + + +         P+  AA    +A      G  P   
Sbjct: 493 TANAPARPADPAPAAALGPALAGAQIGT-------PAAAAAVTAAAAAPSVARGSAPSPA 545

Query: 314 GSGAPGGWRLREARRLPDPTPSPTRYACAAAPRLSGIPSLAG 439
            + A  G     + R P  TPSP   A AA PR +G P+LAG
Sbjct: 546 VTAAATGTAAAISTRAP--TPSPAGRAPAADPRRAGAPALAG 585

>Q2THX0:ZDHC8_PANTR Probable palmitoyltransferase ZDHHC8 - Pan troglodytes (Chimpanzee)|
          Length = 765

 Score = 33.5 bits (75), Expect = 5.7
 Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
 Frame = +2

Query: 134 PRVSSANRPSPAPHASGSPRAS--FSLVARVLSIRLYPSVPAAKPGGSALCCERLGFQPE 307
           PR SS +  SPA     SP  +   +++    S RL+P  P   P  +AL  +R    P+
Sbjct: 658 PRPSSGSHRSPARQGLPSPPGTPHLTILRGPQSCRLHPHGP---PRATALA-DRAEDHPQ 713

Query: 308 LR------GSGAPGGWRLREARRLPDPTPSPTRYACAAAPRLSGI 424
           L+         +PG  RL  A   P P+ SPTR+      ++SG+
Sbjct: 714 LKTPPSKLNGQSPGLARLGLATGPPGPSASPTRH--TLVKKVSGV 756

>P97445:CAC1A_MOUSE Voltage-dependent P/Q-type calcium channel subunit alpha-1A - Mus|
            musculus (Mouse)
          Length = 2368

 Score = 32.7 bits (73), Expect = 9.8
 Identities = 38/117 (32%), Positives = 44/117 (37%), Gaps = 5/117 (4%)
 Frame = +2

Query: 119  GQQNLPRVSSANRP----SPAPHASGSPRASFSLVARVLSIRLYPSVPAAKPGGSALCCE 286
            G++ LP+     RP    SPAP    + R +                PAA PGGS   C 
Sbjct: 2234 GRRQLPQTPCTPRPLVSYSPAPRRPAARRMAG---------------PAAPPGGSPRGCR 2278

Query: 287  RLGFQPELRGSGAPGGWRLREARRL-PDPTPSPTRYACAAAPRLSGIPSLAGLCFHP 454
            R    P    + AP G R R A    PD    P   A   APR    P  AG C  P
Sbjct: 2279 RAPRWP----AHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAAG-CASP 2330


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 554,083,212
Number of extensions: 12368242
Number of successful extensions: 27701
Number of sequences better than 10.0: 5
Number of HSP's gapped: 27646
Number of HSP's successfully gapped: 5
Length of query: 1061
Length of database: 100,686,439
Length adjustment: 124
Effective length of query: 937
Effective length of database: 66,673,859
Effective search space: 62473405883
Effective search space used: 62473405883
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)