ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf95i07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os12g0203100:Os12g0203100 426 e-119
2AK061274:Os02g0744100 37 0.037
3AK110203: 34 0.24
4AK099820:Os03g0669000 34 0.31
5AK067769:Os03g0669000 32 0.91
6Os09g0521100:Os09g0521100 29 7.7
7Os02g0114800:Os02g0114800 29 7.7

>Os12g0203100:Os12g0203100 |
          Length = 303
 Score =  426 bits (1094), Expect(2) = e-119
 Identities = 222/296 (75%), Positives = 234/296 (79%)
 Frame = +1

Query: 169  DLKCRHRDRAAWAMRETDPLVDAVADNLLDRLEDCRKAFPSAFCLGGSAGAVRRSLRGRG 348
            DLK RHRDRAAWAM ETD L DAVADNLLDRLEDCRKAFPSA CLGGSAGAVRRSLRGRG
Sbjct: 53   DLKRRHRDRAAWAMGETDALADAVADNLLDRLEDCRKAFPSALCLGGSAGAVRRSLRGRG 112

Query: 349  GIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKENSQDLIMSCLGLHWI 528
            GIEKL MMDMS DMV KWRE+++ATDD  E  F+VGDEEYLPIKE               
Sbjct: 113  GIEKLIMMDMSADMVRKWREMDNATDDVLETQFVVGDEEYLPIKE--------------- 157

Query: 529  NDLPGAMIQCRLALKPDGLFLAAILGGETLKELRIACTIAQMEREGGISPRMSPLAQVRD 708
                                          +ELRIACTIAQMEREGGISPRMSPLAQVRD
Sbjct: 158  ------------------------------RELRIACTIAQMEREGGISPRMSPLAQVRD 187

Query: 709  AGNLLSRAGFALPGVDVDRYTVKYNSALELVEHLRAMAETNALFQRSPILKRDTALATAA 888
            AGNLL+RAGF LPGVDVDRYTVKYNSALELVEHLRAM ETNALFQR+PILK+DTALATAA
Sbjct: 188  AGNLLTRAGFTLPGVDVDRYTVKYNSALELVEHLRAMGETNALFQRNPILKKDTALATAA 247

Query: 889  IYQSMFGLEDGTIPATFQVIYMTGWKEHSSQQKPKRRGSATVSFGDIRKQFGSNQD 1056
            IYQSMFGLEDGT+PATFQVIYMTGWKEH SQQK KRRGSATVSF D++KQFGSNQ+
Sbjct: 248  IYQSMFGLEDGTVPATFQVIYMTGWKEHPSQQKAKRRGSATVSFSDLQKQFGSNQN 303



 Score = 23.9 bits (50), Expect(2) = e-119
 Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 11/36 (30%)
 Frame = +2

Query: 95  VPNH---HFSSSSA-GEELDGG-------RVKIFDR 169
           +P H   H SSS+A    LDGG       RVKIFDR
Sbjct: 17  LPRHRWAHLSSSAAPAGGLDGGDGSGGGGRVKIFDR 52



to top

>AK061274:Os02g0744100 |
          Length = 293

 Score = 37.0 bits (84), Expect = 0.037
 Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
 Frame = +1

Query: 454 GDEEYLPIKENSQDLIMSCLGLHWINDLPGAMIQCRLALKPDGLFL----AAILGGETLK 621
           G  E LP ++NS D ++  L +  ++D+  A+ + +  LKP GL++     A   G  L+
Sbjct: 176 GVGEALPAEDNSMDAVVGTLVMCSVSDVEMALREIKRVLKPGGLYIFIEHVAAPDGSFLR 235

Query: 622 ELRIACTIAQMEREGGISPRMSPLAQVRDAGNLLSRAGFALPGVDVDRYTVKYNSALELV 801
            ++ A    Q     G           R+ G ++  AGF+     +D  T + ++A  L 
Sbjct: 236 FVQGALNPLQQFVSDGCH-------LTRETGEIIRDAGFS----SLDLNTTRLSTAFILS 284

Query: 802 EHLRAMA 822
            H+  +A
Sbjct: 285 PHVYGVA 291



to top

>AK110203: |
          Length = 1316

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
 Frame = -3

Query: 408  LPPLVHHIYRHVHHGQFLDSTAATKRPADGAGRTAEAECRGERLPAVL--EAVEEVIGDC 235
            +PP   H + H H G     TA    P    G T        R P  L  E + +V+G  
Sbjct: 829  VPPKTAHAHAHAHFGGTETDTATAAEPIVDLGSTR------RRDPDALDPEGLLQVVGHT 882

Query: 234  VYQWISFPHR 205
            +Y WI  P R
Sbjct: 883  IYTWIRRPFR 892



to top

>AK099820:Os03g0669000 |
          Length = 219

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
 Frame = +1

Query: 496 LIMSCLGLHWINDLPGAMIQCRLALKPDGLFLAAILGGETLKELRIACTIAQMEREGGIS 675
           L   C  +H +N+LPG+MI   +        LA  L     K + I+  ++Q +R G ++
Sbjct: 14  LFQDCFLVHVLNELPGSMIMIFVRTCESTRLLALTLRNLRFKAISISGQMSQDKRLGALN 73

Query: 676 PRMSPLAQVRDAGNLLSRAGFALPGVD-VDRYTVKYNS 786
              +    +    ++ SR G  + GVD V  Y +  NS
Sbjct: 74  RFKTKDCNILICTDVASR-GLDIQGVDVVINYDIPMNS 110



to top

>AK067769:Os03g0669000 |
          Length = 472

 Score = 32.3 bits (72), Expect = 0.91
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
 Frame = +1

Query: 508 CLGLHWINDLPGAMIQCRLALKPDGLFLAAILGGETLKELRIACTIAQMEREGGISPRMS 687
           C  +H +N+LPG+MI   +        LA  L     K + I+  ++Q +R G ++   +
Sbjct: 271 CFLVHVLNELPGSMIMIFVRTCESTRLLALTLRNLRFKAISISGQMSQDKRLGALNRFKT 330

Query: 688 PLAQVRDAGNLLSRAGFALPGVD-VDRYTVKYNS 786
               +    ++ SR G  + GVD V  Y +  NS
Sbjct: 331 KDCNILICTDVASR-GLDIQGVDVVINYDIPMNS 363



to top

>Os09g0521100:Os09g0521100 |
          Length = 483

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = -3

Query: 525 PMKPKTAHYQILGVLFDRKILFISNDKVHLGAVVGSTLQLPPLVHHIYRHVHHGQ 361
           P+     H++++G   D  + F++  KV   + +G+    PP +HHI     HG+
Sbjct: 85  PVAGLLEHFKLIGCFDDGSVEFMT--KVIEASGMGNETYFPPSLHHIPPAATHGE 137



to top

>Os02g0114800:Os02g0114800 |
          Length = 297

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 405 PPLVHHIYRHVHHGQFLDSTAATKRPAD 322
           PP +HH + H HH Q  +S+ +T    D
Sbjct: 143 PPSLHHHHHHPHHHQIKNSSGSTTTSHD 170


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 45,459,663
Number of extensions: 1103493
Number of successful extensions: 3361
Number of sequences better than 10.0: 7
Number of HSP's gapped: 3355
Number of HSP's successfully gapped: 9
Length of query: 505
Length of database: 15,399,855
Length adjustment: 105
Effective length of query: 400
Effective length of database: 11,195,550
Effective search space: 4478220000
Effective search space used: 4478220000
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top