Clone Name | FLbaf95i07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | Os12g0203100:Os12g0203100 | 426 | e-119 | 2 | AK061274:Os02g0744100 | 37 | 0.037 | 3 | AK110203: | 34 | 0.24 | 4 | AK099820:Os03g0669000 | 34 | 0.31 | 5 | AK067769:Os03g0669000 | 32 | 0.91 | 6 | Os09g0521100:Os09g0521100 | 29 | 7.7 | 7 | Os02g0114800:Os02g0114800 | 29 | 7.7 |
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>Os12g0203100:Os12g0203100 | Length = 303 Score = 426 bits (1094), Expect(2) = e-119 Identities = 222/296 (75%), Positives = 234/296 (79%) Frame = +1 Query: 169 DLKCRHRDRAAWAMRETDPLVDAVADNLLDRLEDCRKAFPSAFCLGGSAGAVRRSLRGRG 348 DLK RHRDRAAWAM ETD L DAVADNLLDRLEDCRKAFPSA CLGGSAGAVRRSLRGRG Sbjct: 53 DLKRRHRDRAAWAMGETDALADAVADNLLDRLEDCRKAFPSALCLGGSAGAVRRSLRGRG 112 Query: 349 GIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKENSQDLIMSCLGLHWI 528 GIEKL MMDMS DMV KWRE+++ATDD E F+VGDEEYLPIKE Sbjct: 113 GIEKLIMMDMSADMVRKWREMDNATDDVLETQFVVGDEEYLPIKE--------------- 157 Query: 529 NDLPGAMIQCRLALKPDGLFLAAILGGETLKELRIACTIAQMEREGGISPRMSPLAQVRD 708 +ELRIACTIAQMEREGGISPRMSPLAQVRD Sbjct: 158 ------------------------------RELRIACTIAQMEREGGISPRMSPLAQVRD 187 Query: 709 AGNLLSRAGFALPGVDVDRYTVKYNSALELVEHLRAMAETNALFQRSPILKRDTALATAA 888 AGNLL+RAGF LPGVDVDRYTVKYNSALELVEHLRAM ETNALFQR+PILK+DTALATAA Sbjct: 188 AGNLLTRAGFTLPGVDVDRYTVKYNSALELVEHLRAMGETNALFQRNPILKKDTALATAA 247 Query: 889 IYQSMFGLEDGTIPATFQVIYMTGWKEHSSQQKPKRRGSATVSFGDIRKQFGSNQD 1056 IYQSMFGLEDGT+PATFQVIYMTGWKEH SQQK KRRGSATVSF D++KQFGSNQ+ Sbjct: 248 IYQSMFGLEDGTVPATFQVIYMTGWKEHPSQQKAKRRGSATVSFSDLQKQFGSNQN 303 Score = 23.9 bits (50), Expect(2) = e-119 Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 11/36 (30%) Frame = +2 Query: 95 VPNH---HFSSSSA-GEELDGG-------RVKIFDR 169 +P H H SSS+A LDGG RVKIFDR Sbjct: 17 LPRHRWAHLSSSAAPAGGLDGGDGSGGGGRVKIFDR 52
>AK061274:Os02g0744100 | Length = 293 Score = 37.0 bits (84), Expect = 0.037 Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 4/127 (3%) Frame = +1 Query: 454 GDEEYLPIKENSQDLIMSCLGLHWINDLPGAMIQCRLALKPDGLFL----AAILGGETLK 621 G E LP ++NS D ++ L + ++D+ A+ + + LKP GL++ A G L+ Sbjct: 176 GVGEALPAEDNSMDAVVGTLVMCSVSDVEMALREIKRVLKPGGLYIFIEHVAAPDGSFLR 235 Query: 622 ELRIACTIAQMEREGGISPRMSPLAQVRDAGNLLSRAGFALPGVDVDRYTVKYNSALELV 801 ++ A Q G R+ G ++ AGF+ +D T + ++A L Sbjct: 236 FVQGALNPLQQFVSDGCH-------LTRETGEIIRDAGFS----SLDLNTTRLSTAFILS 284 Query: 802 EHLRAMA 822 H+ +A Sbjct: 285 PHVYGVA 291
>AK110203: | Length = 1316 Score = 34.3 bits (77), Expect = 0.24 Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 2/70 (2%) Frame = -3 Query: 408 LPPLVHHIYRHVHHGQFLDSTAATKRPADGAGRTAEAECRGERLPAVL--EAVEEVIGDC 235 +PP H + H H G TA P G T R P L E + +V+G Sbjct: 829 VPPKTAHAHAHAHFGGTETDTATAAEPIVDLGSTR------RRDPDALDPEGLLQVVGHT 882 Query: 234 VYQWISFPHR 205 +Y WI P R Sbjct: 883 IYTWIRRPFR 892
>AK099820:Os03g0669000 | Length = 219 Score = 33.9 bits (76), Expect = 0.31 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 1/98 (1%) Frame = +1 Query: 496 LIMSCLGLHWINDLPGAMIQCRLALKPDGLFLAAILGGETLKELRIACTIAQMEREGGIS 675 L C +H +N+LPG+MI + LA L K + I+ ++Q +R G ++ Sbjct: 14 LFQDCFLVHVLNELPGSMIMIFVRTCESTRLLALTLRNLRFKAISISGQMSQDKRLGALN 73 Query: 676 PRMSPLAQVRDAGNLLSRAGFALPGVD-VDRYTVKYNS 786 + + ++ SR G + GVD V Y + NS Sbjct: 74 RFKTKDCNILICTDVASR-GLDIQGVDVVINYDIPMNS 110
>AK067769:Os03g0669000 | Length = 472 Score = 32.3 bits (72), Expect = 0.91 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 1/94 (1%) Frame = +1 Query: 508 CLGLHWINDLPGAMIQCRLALKPDGLFLAAILGGETLKELRIACTIAQMEREGGISPRMS 687 C +H +N+LPG+MI + LA L K + I+ ++Q +R G ++ + Sbjct: 271 CFLVHVLNELPGSMIMIFVRTCESTRLLALTLRNLRFKAISISGQMSQDKRLGALNRFKT 330 Query: 688 PLAQVRDAGNLLSRAGFALPGVD-VDRYTVKYNS 786 + ++ SR G + GVD V Y + NS Sbjct: 331 KDCNILICTDVASR-GLDIQGVDVVINYDIPMNS 363
>Os09g0521100:Os09g0521100 | Length = 483 Score = 29.3 bits (64), Expect = 7.7 Identities = 15/55 (27%), Positives = 28/55 (50%) Frame = -3 Query: 525 PMKPKTAHYQILGVLFDRKILFISNDKVHLGAVVGSTLQLPPLVHHIYRHVHHGQ 361 P+ H++++G D + F++ KV + +G+ PP +HHI HG+ Sbjct: 85 PVAGLLEHFKLIGCFDDGSVEFMT--KVIEASGMGNETYFPPSLHHIPPAATHGE 137
>Os02g0114800:Os02g0114800 | Length = 297 Score = 29.3 bits (64), Expect = 7.7 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = -3 Query: 405 PPLVHHIYRHVHHGQFLDSTAATKRPAD 322 PP +HH + H HH Q +S+ +T D Sbjct: 143 PPSLHHHHHHPHHHQIKNSSGSTTTSHD 170 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 45,459,663 Number of extensions: 1103493 Number of successful extensions: 3361 Number of sequences better than 10.0: 7 Number of HSP's gapped: 3355 Number of HSP's successfully gapped: 9 Length of query: 505 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 400 Effective length of database: 11,195,550 Effective search space: 4478220000 Effective search space used: 4478220000 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)