ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf95i07 |
|---|---|
| Clone Library Name | barley_pub |
>O80543:Y1280_ARATH Uncharacterized protein At1g22800 - Arabidopsis thaliana (Mouse-ear| cress) Length = 355 Score = 439 bits (1128), Expect = e-122 Identities = 218/294 (74%), Positives = 250/294 (85%), Gaps = 2/294 (0%) Frame = +1 Query: 169 DLKCRHRDRAAWAMRE-TDPLVDAVADNLLDRLEDCRKAFPSAFCLGGSAGAVRRSLRGR 345 DLK HRDRAAW R+ D VDAVADNLLDRLEDC+K+FP+AFCLGGS GAV+R LRGR Sbjct: 59 DLKRIHRDRAAWLSRQKNDSFVDAVADNLLDRLEDCKKSFPTAFCLGGSLGAVKRLLRGR 118 Query: 346 GGIEKLTMMDMSVDMVNKWRELES-ATDDGPEMHFIVGDEEYLPIKENSQDLIMSCLGLH 522 GGIEKL MMD S DM+ R+ + + D+ E + VGDEE+LP+KE+S DLI+S LGLH Sbjct: 119 GGIEKLIMMDTSYDMIKSCRDAQDDSLDNSIETSYFVGDEEFLPVKESSVDLIISSLGLH 178 Query: 523 WINDLPGAMIQCRLALKPDGLFLAAILGGETLKELRIACTIAQMEREGGISPRMSPLAQV 702 W NDLPG+MIQC+LALKPDGLFLAAILGGETLKELRIACT+A MEREGGISPR+SPLAQV Sbjct: 179 WTNDLPGSMIQCKLALKPDGLFLAAILGGETLKELRIACTLAHMEREGGISPRLSPLAQV 238 Query: 703 RDAGNLLSRAGFALPGVDVDRYTVKYNSALELVEHLRAMAETNALFQRSPILKRDTALAT 882 RDAGNLL+RAGF+LPGVDVD Y VKY A++L+EHLRAM ETNAL +R+ IL R+TA+AT Sbjct: 239 RDAGNLLTRAGFSLPGVDVDEYVVKYKRAMDLIEHLRAMGETNALLERNKILNRETAVAT 298 Query: 883 AAIYQSMFGLEDGTIPATFQVIYMTGWKEHSSQQKPKRRGSATVSFGDIRKQFG 1044 AAIY SMF EDGTIPATFQVIYMTGW+EHSS + KRRGSATVSF D++KQFG Sbjct: 299 AAIYDSMFATEDGTIPATFQVIYMTGWREHSSHPQAKRRGSATVSFTDLQKQFG 352
>Q9ZD84:Y459_RICPR Uncharacterized protein RP459 - Rickettsia prowazekii| Length = 226 Score = 82.0 bits (201), Expect = 6e-15 Identities = 45/132 (34%), Positives = 75/132 (56%) Frame = +1 Query: 442 HFIVGDEEYLPIKENSQDLIMSCLGLHWINDLPGAMIQCRLALKPDGLFLAAILGGETLK 621 H ++ D+E L +++S DLI+ LGLHWIND+ + R LK DG+F+ +GG++LK Sbjct: 49 HKLLIDDENLEFQKDSFDLIIYSLGLHWINDVQRFLYNIRTFLKSDGIFIGNFVGGDSLK 108 Query: 622 ELRIACTIAQMEREGGISPRMSPLAQVRDAGNLLSRAGFALPGVDVDRYTVKYNSALELV 801 LR + ++ SP +SP LL AGF+ VD + +K+ + + L+ Sbjct: 109 NLRKSLIDNEIASGFKHSPHISPFIHFDHVPMLLLHAGFSEVIVDYENIALKFENPIVLM 168 Query: 802 EHLRAMAETNAL 837 + ++ + E+NAL Sbjct: 169 KEIKNIGESNAL 180
>P36571:BIOC_SERMA Biotin synthesis protein bioC - Serratia marcescens| Length = 255 Score = 60.5 bits (145), Expect = 2e-08 Identities = 53/222 (23%), Positives = 97/222 (43%) Frame = +1 Query: 304 GGSAGAVRRSLRGRGGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKE 483 G G R R RG +++T +D++ M++ R+ ++A H+++GD E +P+ + Sbjct: 54 GCGTGYFSRMWRERG--KRVTALDLAPGMLDVARQRQAAH------HYLLGDIEQVPLPD 105 Query: 484 NSQDLIMSCLGLHWINDLPGAMIQCRLALKPDGLFLAAILGGETLKELRIACTIAQMERE 663 + D+ S L + W +DLP A+ + +P G+ L + L +L+EL A ER Sbjct: 106 AAMDICFSSLVVQWCSDLPAALAELYRVTRPGGVILFSTLAAGSLQELGDAWQQVDGERH 165 Query: 664 GGISPRMSPLAQVRDAGNLLSRAGFALPGVDVDRYTVKYNSALELVEHLRAMAETNALFQ 843 PL Q+R A + + T+ Y + L+ L+ + T+ Sbjct: 166 VN---AFLPLTQIRTACAAYRHE------LVTELRTLNYPDVMTLMRSLKGIGATHLHQG 216 Query: 844 RSPILKRDTALATAAIYQSMFGLEDGTIPATFQVIYMTGWKE 969 R L LA Q+ + G P ++ + Y ++E Sbjct: 217 REGGLMSRGRLAA---LQAAYPCRQGQFPLSYHLAYGVIYRE 255
>O06898:BIOC_ESCVU Biotin synthesis protein bioC - Escherichia vulneris| Length = 251 Score = 50.8 bits (120), Expect = 1e-05 Identities = 43/148 (29%), Positives = 67/148 (45%) Frame = +1 Query: 193 RAAWAMRETDPLVDAVADNLLDRLEDCRKAFPSAFCLGGSAGAVRRSLRGRGGIEKLTMM 372 RAA + L AD LL +L + R A S G G++ R R G ++T + Sbjct: 15 RAAQSYDSHAQLQRQSADLLLAKLGERRPA--SVLDAGCGPGSMSRYWRDAGA--EVTAL 70 Query: 373 DMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKENSQDLIMSCLGLHWINDLPGAMI 552 D+S+ M+ + + ++A H++ D E LP+ + DL S L + W NDL A+ Sbjct: 71 DLSLPMLRQAQSQQAA------QHYVAADIEALPLADARFDLAWSNLAVQWCNDLGQALK 124 Query: 553 QCRLALKPDGLFLAAILGGETLKELRIA 636 ++P G L +L EL A Sbjct: 125 SLHRVVRPGGAVAFTTLASGSLPELHQA 152
>Q9A258:UBIE_CAUCR Ubiquinone/menaquinone biosynthesis methyltransferase ubiE -| Caulobacter crescentus (Caulobacter vibrioides) Length = 252 Score = 42.4 bits (98), Expect = 0.005 Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 4/102 (3%) Frame = +1 Query: 298 CLGGSAGAVRRSLR-GRGGIEKLTMMDMSVDMVNKWRELESATDDG---PEMHFIVGDEE 465 C GG+ RR + R E+ D ++++V+ E+ A + PE+ + VGD + Sbjct: 67 CAGGTGDMARRFAKMARKAQERRGGPDATINIVDYNAEMIMAGIERGGEPEITWTVGDAQ 126 Query: 466 YLPIKENSQDLIMSCLGLHWINDLPGAMIQCRLALKPDGLFL 591 LP+ + D + G+ + D+ A+ + R LKP G FL Sbjct: 127 RLPLPDAYADAYVISFGIRNVTDINAALREARRVLKPGGRFL 168
>Q68W57:UBIE_RICTY Ubiquinone/menaquinone biosynthesis methyltransferase ubiE -| Rickettsia typhi Length = 248 Score = 41.2 bits (95), Expect = 0.012 Identities = 26/96 (27%), Positives = 45/96 (46%) Frame = +1 Query: 304 GGSAGAVRRSLRGRGGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKE 483 G A + + + RG L + D++ +M+N ++ + M FIV + E LP + Sbjct: 69 GDIALQLAKKAKARGNNISLILSDINEEMLNNAKKKSIDLNLFQNMKFIVANAEELPFLD 128 Query: 484 NSQDLIMSCLGLHWINDLPGAMIQCRLALKPDGLFL 591 NS D G+ + D+ A+ + LKP G F+ Sbjct: 129 NSFDYYTIAFGIRNVPDINKALKEAYRVLKPMGKFI 164
>P12999:BIOC_ECOLI Biotin synthesis protein bioC - Escherichia coli| Length = 251 Score = 41.2 bits (95), Expect = 0.012 Identities = 40/148 (27%), Positives = 66/148 (44%) Frame = +1 Query: 193 RAAWAMRETDPLVDAVADNLLDRLEDCRKAFPSAFCLGGSAGAVRRSLRGRGGIEKLTMM 372 RAA + L AD LL L ++ + G G + R R R ++T + Sbjct: 15 RAAAHYEQHADLQRQSADALLAMLP--QRKYTHVLDAGCGPGWMSRHWRERHA--QVTAL 70 Query: 373 DMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKENSQDLIMSCLGLHWINDLPGAMI 552 D+S M+ + R+ ++A H++ GD E LP+ + DL S L + W +L A+ Sbjct: 71 DLSPPMLVQARQKDAAD------HYLAGDIESLPLATATFDLAWSNLAVQWCGNLSTALR 124 Query: 553 QCRLALKPDGLFLAAILGGETLKELRIA 636 + ++P G+ L +L EL A Sbjct: 125 ELYRVVRPKGVVAFTTLVQGSLPELHQA 152
>P45249:BIOC_HAEIN Putative biotin synthesis protein bioC - Haemophilus influenzae| Length = 260 Score = 40.4 bits (93), Expect = 0.020 Identities = 54/250 (21%), Positives = 95/250 (38%), Gaps = 4/250 (1%) Frame = +1 Query: 247 NLLDRLEDCRKAFPSAFCLGGSAGAVRRSLRGRGGIEKLTMMDMSVD--MVNKWRELESA 420 NL+ L+D + GS +V G G + L +S D + N ++++ Sbjct: 36 NLMAHLQD--------YLPNGSLDSVLELGCGSGMLSSLLQKQISADYWLFNDLCDVQTQ 87 Query: 421 TDDG--PEMHFIVGDEEYLPIKENSQDLIMSCLGLHWINDLPGAMIQCRLALKPDGLFLA 594 + F GD E+ + DLI S + W + + C+ LK +GL Sbjct: 88 LAEKLPQSFDFYCGDAEHFLFLQQF-DLIASASAVQWFHQPDAFIAHCKTGLKTNGLLAV 146 Query: 595 AILGGETLKELRIACTIAQMEREGGISPRMSPLAQVRDAGNLLSRAGFALPGVDVDRYTV 774 A G + LKE+R Q+ G P +S F L + + + Sbjct: 147 ATFGEDNLKEVR------QITNIGLNYPTLS-------QWQTWLAKDFELLWCEDFKVIL 193 Query: 775 KYNSALELVEHLRAMAETNALFQRSPILKRDTALATAAIYQSMFGLEDGTIPATFQVIYM 954 +++ L++++HL+ T A Q++ R Y S FG+ G + T+ ++ Sbjct: 194 DFDTPLDVLKHLKYTGVT-ATNQKN--WTRKNLNGFIGDYLSAFGMPSGKVRLTYHPLFF 250 Query: 955 TGWKEHSSQQ 984 H Q Sbjct: 251 IARYSHIENQ 260
>Q9ZCP3:UBIE_RICPR Ubiquinone/menaquinone biosynthesis methyltransferase ubiE -| Rickettsia prowazekii Length = 248 Score = 39.7 bits (91), Expect = 0.034 Identities = 25/96 (26%), Positives = 45/96 (46%) Frame = +1 Query: 304 GGSAGAVRRSLRGRGGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKE 483 G A + + + RG L + D++ +M+N ++ + + FIV + E LP + Sbjct: 69 GDIALKLAKKAKDRGNNISLILSDINEEMLNNAKKKSIDLNLFQNIKFIVANAEELPFSD 128 Query: 484 NSQDLIMSCLGLHWINDLPGAMIQCRLALKPDGLFL 591 NS D G+ + D+ A+ + LKP G F+ Sbjct: 129 NSFDYYTIAFGIRNVPDINKALKEAYRVLKPMGKFV 164
>Q8YDE4:UBIE_BRUME Ubiquinone/menaquinone biosynthesis methyltransferase ubiE -| Brucella melitensis Length = 269 Score = 38.9 bits (89), Expect = 0.058 Identities = 26/106 (24%), Positives = 45/106 (42%) Frame = +1 Query: 274 RKAFPSAFCLGGSAGAVRRSLRGRGGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIV 453 R + S GG+ R + G +T++D++ M+ RE + F+ Sbjct: 80 RPGWTSLDVAGGTGDIAFRIVEASGRQAHVTILDINGSMLGVGRERAIKKGLIDNLEFVE 139 Query: 454 GDEEYLPIKENSQDLIMSCLGLHWINDLPGAMIQCRLALKPDGLFL 591 + E LP ++NS D G+ + + A+ + LKP G FL Sbjct: 140 ANAEELPFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFL 185
>Q4UMW4:UBIE_RICFE Ubiquinone/menaquinone biosynthesis methyltransferase ubiE -| Rickettsia felis (Rickettsia azadi) Length = 248 Score = 38.5 bits (88), Expect = 0.075 Identities = 25/96 (26%), Positives = 43/96 (44%) Frame = +1 Query: 304 GGSAGAVRRSLRGRGGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKE 483 G A + + R RG LT+ D++ +M+ ++ + + F V E LP + Sbjct: 69 GDIALKLAKKARDRGNNIALTLSDINEEMLKNAKKKAIDLNLFQNLKFTVASAEELPFSD 128 Query: 484 NSQDLIMSCLGLHWINDLPGAMIQCRLALKPDGLFL 591 NS D G+ + D+ A+ + LKP G F+ Sbjct: 129 NSFDYYTIAFGIRNVPDINKALKEAYRVLKPMGKFI 164
>Q1RJY5:UBIE_RICBR Ubiquinone/menaquinone biosynthesis methyltransferase ubiE -| Rickettsia bellii (strain RML369-C) Length = 248 Score = 38.1 bits (87), Expect = 0.098 Identities = 24/96 (25%), Positives = 44/96 (45%) Frame = +1 Query: 304 GGSAGAVRRSLRGRGGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKE 483 G A + + + RG LT+ D++ +M+ + ++ + + F V E LP + Sbjct: 69 GDIALKLAKKAKDRGSNISLTLSDINEEMLRQAKKKSIDLNLFQNLKFTVASAEELPFPD 128 Query: 484 NSQDLIMSCLGLHWINDLPGAMIQCRLALKPDGLFL 591 NS D G+ + D+ A+ + LKP G F+ Sbjct: 129 NSFDYYTIAFGIRNVPDINKALKEAYRVLKPMGKFI 164
>Q8FUZ3:UBIE_BRUSU Ubiquinone/menaquinone biosynthesis methyltransferase ubiE -| Brucella suis Length = 269 Score = 37.7 bits (86), Expect = 0.13 Identities = 26/106 (24%), Positives = 45/106 (42%) Frame = +1 Query: 274 RKAFPSAFCLGGSAGAVRRSLRGRGGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIV 453 R + S GG+ R + G +T++D++ M+ RE + F+ Sbjct: 80 RPGWTSLDVAGGTGDIAFRIVEVSGRQAHVTILDINGSMLGVGRERAIKKGLIDNLEFVE 139 Query: 454 GDEEYLPIKENSQDLIMSCLGLHWINDLPGAMIQCRLALKPDGLFL 591 + E LP ++NS D G+ + + A+ + LKP G FL Sbjct: 140 ANAEELPFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFL 185
>Q5RBK6:COQ5_PONPY Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial| precursor - Pongo pygmaeus (Orangutan) Length = 327 Score = 36.2 bits (82), Expect = 0.37 Identities = 19/81 (23%), Positives = 39/81 (48%) Frame = +1 Query: 349 GIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKENSQDLIMSCLGLHWI 528 G ++ M D++ +M+ ++ A + +++GD E LP ++ D+ G+ + Sbjct: 163 GGSRVVMCDINKEMLKVGKQKALAQGYRAGLAWVLGDAEELPFDDDKFDIYTIAFGIRNV 222 Query: 529 NDLPGAMIQCRLALKPDGLFL 591 + A+ + LKP G FL Sbjct: 223 THIDQALQEAHRVLKPGGRFL 243
>Q89AK7:BIOC_BUCBP Biotin synthesis protein bioC - Buchnera aphidicola subsp.| Baizongia pistaciae Length = 247 Score = 36.2 bits (82), Expect = 0.37 Identities = 26/92 (28%), Positives = 42/92 (45%) Frame = +1 Query: 361 LTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKENSQDLIMSCLGLHWINDLP 540 +T +D S +M+ + SA +++ D E LPI +N DL S L L W N Sbjct: 65 VTALDFSKNMLLTAKNTNSAD------YYLHADMEQLPICDNIFDLSWSNLSLQWCNKFN 118 Query: 541 GAMIQCRLALKPDGLFLAAILGGETLKELRIA 636 A+ + KP G+ + + + +L E A Sbjct: 119 KAISELCRVTKPGGMVVFSTIAHGSLYEFNKA 150
>Q9WZL2:UBIE_THEMA Menaquinone biosynthesis methyltransferase ubiE - Thermotoga| maritima Length = 229 Score = 35.8 bits (81), Expect = 0.49 Identities = 29/94 (30%), Positives = 39/94 (41%) Frame = +1 Query: 301 LGGSAGAVRRSLRGRGGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIK 480 L G V R L+ + ++T +D S M LE A + FIVGD LP Sbjct: 54 LATGTGDVARLLKRKAPHLEITGLDSSSKM------LEIAEKRLKDGEFIVGDAHNLPFY 107 Query: 481 ENSQDLIMSCLGLHWINDLPGAMIQCRLALKPDG 582 + S D I G +D + +CR LK G Sbjct: 108 DRSFDAITVAFGFRNFSDRRRVLRECRRVLKRKG 141
>Q9CXI0:COQ5_MOUSE Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial| precursor - Mus musculus (Mouse) Length = 327 Score = 35.8 bits (81), Expect = 0.49 Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%) Frame = +1 Query: 364 TMMDMSVDM--VNKWRELESATDDGPEMHFIVGDEEYLPIKENSQDLIMSCLGLHWINDL 537 T+ D++ +M V K + L+ G + +++GD E LP ++S D+ G+ + + Sbjct: 168 TVCDINREMLKVGKQKALDQGHTAG--LAWVLGDAEELPFDDDSFDVYTIAFGIRNVTHI 225 Query: 538 PGAMIQCRLALKPDGLFLAAILG 606 A+ + LKP G FL G Sbjct: 226 DQALQEAHRVLKPGGRFLCLEFG 248
>Q6G577:UBIE_BARHE Ubiquinone/menaquinone biosynthesis methyltransferase ubiE -| Bartonella henselae (Rochalimaea henselae) Length = 260 Score = 35.4 bits (80), Expect = 0.64 Identities = 22/96 (22%), Positives = 42/96 (43%) Frame = +1 Query: 304 GGSAGAVRRSLRGRGGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKE 483 GG+ R L T++D++ M++ ++ P + F+ + E+LP ++ Sbjct: 81 GGTGDIAFRILNASRQKAHATVLDINGSMLSVGKKRAEKNGLAPLIDFVEANAEHLPFED 140 Query: 484 NSQDLIMSCLGLHWINDLPGAMIQCRLALKPDGLFL 591 S D G+ + + A+ + LKP G FL Sbjct: 141 QSFDAYTIAFGIRNVPHIDQALREAFRVLKPGGRFL 176
>Q4L6H3:UBIE_STAHJ Menaquinone biosynthesis methyltransferase ubiE - Staphylococcus| haemolyticus (strain JCSC1435) Length = 239 Score = 35.0 bits (79), Expect = 0.83 Identities = 23/82 (28%), Positives = 39/82 (47%) Frame = +1 Query: 346 GGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKENSQDLIMSCLGLHW 525 G ++T +D S +M+ +E T +H + GD LP ++NS D + GL Sbjct: 72 GAHGEVTGLDFSENMLEVGKE---KTKHMNNIHLVHGDAMNLPFEDNSFDYVTIGFGLRN 128 Query: 526 INDLPGAMIQCRLALKPDGLFL 591 + D A+ + LKP G+ + Sbjct: 129 VPDYLVALKEMNRVLKPGGMIV 150
>Q8EXJ3:UBIE_LEPIN Menaquinone biosynthesis methyltransferase ubiE - Leptospira| interrogans Length = 249 Score = 35.0 bits (79), Expect = 0.83 Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 1/104 (0%) Frame = +1 Query: 298 CLGGSAGAVRRSLRGRGGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPI 477 C G G + L ++ +T +D S +M+ + +HF +GD L Sbjct: 64 CCG--TGDISLRLENSSFVDHVTCVDFSENMLEIAKTRLKKQAQKGRVHFELGDATKLIQ 121 Query: 478 KENSQ-DLIMSCLGLHWINDLPGAMIQCRLALKPDGLFLAAILG 606 +NSQ D++ GL +++L A+ + LKP G+FL +G Sbjct: 122 FQNSQFDVVSIGFGLRNVDNLSKAIGEIFRVLKPGGMFLNLDVG 165
>Q75FL1:UBIE_LEPIC Menaquinone biosynthesis methyltransferase ubiE - Leptospira| interrogans serogroup Icterohaemorrhagiae serovar copenhageni Length = 249 Score = 35.0 bits (79), Expect = 0.83 Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 1/104 (0%) Frame = +1 Query: 298 CLGGSAGAVRRSLRGRGGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPI 477 C G G + L ++ +T +D S +M+ + +HF +GD L Sbjct: 64 CCG--TGDISLRLENSSFVDHVTCVDFSENMLEIAKTRLKKQAQKGRVHFELGDATKLIQ 121 Query: 478 KENSQ-DLIMSCLGLHWINDLPGAMIQCRLALKPDGLFLAAILG 606 +NSQ D++ GL +++L A+ + LKP G+FL +G Sbjct: 122 FQNSQFDVVSIGFGLRNVDNLSKAIGEIFRVLKPGGMFLNLDVG 165
>Q8YLP4:UBIE_ANASP Menaquinone biosynthesis methyltransferase ubiE - Anabaena sp.| (strain PCC 7120) Length = 229 Score = 35.0 bits (79), Expect = 0.83 Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 3/111 (2%) Frame = +1 Query: 280 AFPSAFCLG---GSAGAVRRSLRGRGGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFI 450 A P CL GS R R G +++ +D S +++ ++ + P + ++ Sbjct: 41 AKPGDTCLDLCCGSGDLALRLARRVGSTGQVSGVDFSANLLETAKQRAQSQYPQPNISWV 100 Query: 451 VGDEEYLPIKENSQDLIMSCLGLHWINDLPGAMIQCRLALKPDGLFLAAIL 603 + LP K+N D GL + D+P ++ + LKP+ AAIL Sbjct: 101 EANVLDLPFKDNQFDAATMGYGLRNVTDIPRSLQELHRVLKPNA--KAAIL 149
>Q0P5A2:COQ5_BOVIN Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial| precursor - Bos taurus (Bovine) Length = 330 Score = 35.0 bits (79), Expect = 0.83 Identities = 20/81 (24%), Positives = 38/81 (46%) Frame = +1 Query: 349 GIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKENSQDLIMSCLGLHWI 528 G + + D++ +M+ ++ A + +I+GD E LP +N D+ G+ + Sbjct: 163 GGSHVMVCDINKEMLKIGKQKARAQGYKAGLAWILGDAEELPFDDNKFDVYTIAFGIRNV 222 Query: 529 NDLPGAMIQCRLALKPDGLFL 591 + A+ + LKP G FL Sbjct: 223 THIDQALQEAHRVLKPGGRFL 243
>Q6G1I2:UBIE_BARQU Ubiquinone/menaquinone biosynthesis methyltransferase ubiE -| Bartonella quintana (Rochalimaea quintana) Length = 260 Score = 34.7 bits (78), Expect = 1.1 Identities = 22/96 (22%), Positives = 41/96 (42%) Frame = +1 Query: 304 GGSAGAVRRSLRGRGGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKE 483 GG+ R L T++D++ M++ ++ P F+ + E+LP ++ Sbjct: 81 GGTGDIAFRILNASRKKAHATVLDINSSMLSVGKKRAQKNGLAPLTDFVEANAEHLPFED 140 Query: 484 NSQDLIMSCLGLHWINDLPGAMIQCRLALKPDGLFL 591 S D G+ + + A+ + LKP G FL Sbjct: 141 QSFDAYTIAFGIRNVPHINQALREAFRVLKPGGRFL 176
>Q02362:ICP4_GAHVG Trans-acting transcriptional activator protein ICP4 - Gallid| herpesvirus 2 (strain GA) (GaHV-2) (Marek's disease herpesvirus type 1) Length = 1415 Score = 34.7 bits (78), Expect = 1.1 Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 1/112 (0%) Frame = -1 Query: 611 SPPRIAARKR-PSGFNANLHCIMAPGRSFIQ*SPRQLIIKSWEFSLIGRYSSSPTIKCIS 435 S PR + R R P +N H I++P R+ P ++ +G S SP+ S Sbjct: 114 SSPRSSPRPRGPETSPSNEHIIISPPRN----PPSNTTHRN-----VGHVSRSPSSSSSS 164 Query: 434 GPSSVALSNSRHLFTISTDMSIMVNFSIPPRPRSDRRTAPAEPPRQNAEGNA 279 SS S+S L +S+ S PPRPR+D + P N G + Sbjct: 165 SSSSSPSSSS--LIVLSSPSSSRSPSPSPPRPRADSSSRPRRGRGSNRGGRS 214
>Q5HYK3:COQ5_HUMAN Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial| precursor - Homo sapiens (Human) Length = 327 Score = 34.7 bits (78), Expect = 1.1 Identities = 18/81 (22%), Positives = 39/81 (48%) Frame = +1 Query: 349 GIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKENSQDLIMSCLGLHWI 528 G ++ + D++ +M+ ++ A + +++GD E LP ++ D+ G+ + Sbjct: 163 GGSRVVVCDINKEMLKVGKQKALAQGYRAGLAWVLGDAEELPFDDDKFDIYTIAFGIRNV 222 Query: 529 NDLPGAMIQCRLALKPDGLFL 591 + A+ + LKP G FL Sbjct: 223 THIDQALQEAHRVLKPGGRFL 243
>Q6GGU0:UBIE_STAAR Menaquinone biosynthesis methyltransferase ubiE - Staphylococcus| aureus (strain MRSA252) Length = 241 Score = 34.3 bits (77), Expect = 1.4 Identities = 24/91 (26%), Positives = 43/91 (47%) Frame = +1 Query: 346 GGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKENSQDLIMSCLGLHW 525 G ++T +D S +M+ +E ++ ++ +H GD LP ++NS D + GL Sbjct: 72 GSTGEVTGIDFSENMLEVGKEKTASMENVKLVH---GDAMELPFEDNSFDYVTIGFGLRN 128 Query: 526 INDLPGAMIQCRLALKPDGLFLAAILGGETL 618 + D A+ + LKP G+ + TL Sbjct: 129 VPDYLVALKEMNRVLKPGGMVVCLETSQPTL 159
>P67063:UBIE_STAAW Menaquinone biosynthesis methyltransferase ubiE - Staphylococcus| aureus (strain MW2) Length = 241 Score = 33.5 bits (75), Expect = 2.4 Identities = 24/91 (26%), Positives = 43/91 (47%) Frame = +1 Query: 346 GGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKENSQDLIMSCLGLHW 525 G ++T +D S +M+ +E ++ ++ +H GD LP ++NS D + GL Sbjct: 72 GPTGEVTGIDFSENMLEVGKEKTASMENVKLVH---GDAMELPFEDNSFDYVTIGFGLRN 128 Query: 526 INDLPGAMIQCRLALKPDGLFLAAILGGETL 618 + D A+ + LKP G+ + TL Sbjct: 129 VPDYLVALKEMNRVLKPGGMVVCLETSQPTL 159
>Q6G992:UBIE_STAAS Menaquinone biosynthesis methyltransferase ubiE - Staphylococcus| aureus (strain MSSA476) Length = 241 Score = 33.5 bits (75), Expect = 2.4 Identities = 24/91 (26%), Positives = 43/91 (47%) Frame = +1 Query: 346 GGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKENSQDLIMSCLGLHW 525 G ++T +D S +M+ +E ++ ++ +H GD LP ++NS D + GL Sbjct: 72 GPTGEVTGIDFSENMLEVGKEKTASMENVKLVH---GDAMELPFEDNSFDYVTIGFGLRN 128 Query: 526 INDLPGAMIQCRLALKPDGLFLAAILGGETL 618 + D A+ + LKP G+ + TL Sbjct: 129 VPDYLVALKEMNRVLKPGGMVVCLETSQPTL 159
>P67062:UBIE_STAAN Menaquinone biosynthesis methyltransferase ubiE - Staphylococcus| aureus (strain N315) Length = 241 Score = 33.5 bits (75), Expect = 2.4 Identities = 24/91 (26%), Positives = 43/91 (47%) Frame = +1 Query: 346 GGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKENSQDLIMSCLGLHW 525 G ++T +D S +M+ +E ++ ++ +H GD LP ++NS D + GL Sbjct: 72 GPTGEVTGIDFSENMLEVGKEKTASMENVKLVH---GDAMELPFEDNSFDYVTIGFGLRN 128 Query: 526 INDLPGAMIQCRLALKPDGLFLAAILGGETL 618 + D A+ + LKP G+ + TL Sbjct: 129 VPDYLVALKEMNRVLKPGGMVVCLETSQPTL 159
>P67061:UBIE_STAAM Menaquinone biosynthesis methyltransferase ubiE - Staphylococcus| aureus (strain Mu50 / ATCC 700699) Length = 241 Score = 33.5 bits (75), Expect = 2.4 Identities = 24/91 (26%), Positives = 43/91 (47%) Frame = +1 Query: 346 GGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKENSQDLIMSCLGLHW 525 G ++T +D S +M+ +E ++ ++ +H GD LP ++NS D + GL Sbjct: 72 GPTGEVTGIDFSENMLEVGKEKTASMENVKLVH---GDAMELPFEDNSFDYVTIGFGLRN 128 Query: 526 INDLPGAMIQCRLALKPDGLFLAAILGGETL 618 + D A+ + LKP G+ + TL Sbjct: 129 VPDYLVALKEMNRVLKPGGMVVCLETSQPTL 159
>Q5HFV2:UBIE_STAAC Menaquinone biosynthesis methyltransferase ubiE - Staphylococcus| aureus (strain COL) Length = 241 Score = 33.5 bits (75), Expect = 2.4 Identities = 24/91 (26%), Positives = 43/91 (47%) Frame = +1 Query: 346 GGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKENSQDLIMSCLGLHW 525 G ++T +D S +M+ +E ++ ++ +H GD LP ++NS D + GL Sbjct: 72 GPTGEVTGIDFSENMLEVGKEKTASMENVKLVH---GDAMELPFEDNSFDYVTIGFGLRN 128 Query: 526 INDLPGAMIQCRLALKPDGLFLAAILGGETL 618 + D A+ + LKP G+ + TL Sbjct: 129 VPDYLVALKEMNRVLKPGGMVVCLETSQPTL 159
>Q6NDM2:UBIE_RHOPA Ubiquinone/menaquinone biosynthesis methyltransferase ubiE -| Rhodopseudomonas palustris Length = 253 Score = 33.5 bits (75), Expect = 2.4 Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 2/98 (2%) Frame = +1 Query: 304 GGSAGAVRRSLRGRGGIEKLTMMDMSVDM--VNKWRELESATDDGPEMHFIVGDEEYLPI 477 GG+ R+ + G T+ D++ DM V + R +E DD ++ F+ G+ E L Sbjct: 74 GGTGDISFRAAKASGAGFHSTVCDINTDMLEVGRQRAVERNLDD--KVDFVEGNAESLQF 131 Query: 478 KENSQDLIMSCLGLHWINDLPGAMIQCRLALKPDGLFL 591 + S D G+ + + A+ + LKP FL Sbjct: 132 DDRSFDAYTIAFGIRNVPRIDLALKEAYRVLKPGSRFL 169
>Q5JH53:KHSE_PYRKO Homoserine kinase - Pyrococcus kodakaraensis (Thermococcus| kodakaraensis) Length = 292 Score = 33.1 bits (74), Expect = 3.2 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = +1 Query: 448 IVGDEEYLPIKENSQDLIMSCLGLHWINDLPGAMIQCR-LALKPDGLFLAAILGGE 612 +VG+E YL +K + S LG + L GA+ R L ++ DGL + A L GE Sbjct: 65 LVGEELYLRMKLRKEIRPRSGLGSSGASSLAGALAAARVLGIEDDGLIIKAALAGE 120
>Q8CSH9:UBIE_STAES Menaquinone biosynthesis methyltransferase ubiE - Staphylococcus| epidermidis (strain ATCC 12228) Length = 241 Score = 32.7 bits (73), Expect = 4.1 Identities = 23/91 (25%), Positives = 42/91 (46%) Frame = +1 Query: 346 GGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKENSQDLIMSCLGLHW 525 G ++T +D S +M+ ++ ++ ++ +H GD LP +NS D + GL Sbjct: 72 GSKGQVTGLDFSENMLEVGKQKTASLENIQLVH---GDAMNLPFDDNSFDYVTIGFGLRN 128 Query: 526 INDLPGAMIQCRLALKPDGLFLAAILGGETL 618 + D A+ + LKP G+ + TL Sbjct: 129 VPDYLSALKEMHRVLKPGGMVVCLETSQPTL 159
>Q5HP74:UBIE_STAEQ Menaquinone biosynthesis methyltransferase ubiE - Staphylococcus| epidermidis (strain ATCC 35984 / RP62A) Length = 241 Score = 32.7 bits (73), Expect = 4.1 Identities = 23/91 (25%), Positives = 42/91 (46%) Frame = +1 Query: 346 GGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKENSQDLIMSCLGLHW 525 G ++T +D S +M+ ++ ++ ++ +H GD LP +NS D + GL Sbjct: 72 GSKGQVTGLDFSENMLEVGKQKTASLENIQLVH---GDAMNLPFDDNSFDYVTIGFGLRN 128 Query: 526 INDLPGAMIQCRLALKPDGLFLAAILGGETL 618 + D A+ + LKP G+ + TL Sbjct: 129 VPDYLSALKEMHRVLKPGGMVVCLETSQPTL 159
>Q7Y183:RH10_ORYSJ DEAD-box ATP-dependent RNA helicase 10 - Oryza sativa subsp.| japonica (Rice) Length = 472 Score = 32.3 bits (72), Expect = 5.4 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 1/94 (1%) Frame = +1 Query: 508 CLGLHWINDLPGAMIQCRLALKPDGLFLAAILGGETLKELRIACTIAQMEREGGISPRMS 687 C +H +N+LPG+MI + LA L K + I+ ++Q +R G ++ + Sbjct: 271 CFLVHVLNELPGSMIMIFVRTCESTRLLALTLRNLRFKAISISGQMSQDKRLGALNRFKT 330 Query: 688 PLAQVRDAGNLLSRAGFALPGVD-VDRYTVKYNS 786 + ++ SR G + GVD V Y + NS Sbjct: 331 KDCNILICTDVASR-GLDIQGVDVVINYDIPMNS 363
>Q4G064:COQ5_RAT Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial| precursor - Rattus norvegicus (Rat) Length = 327 Score = 32.3 bits (72), Expect = 5.4 Identities = 17/73 (23%), Positives = 35/73 (47%) Frame = +1 Query: 373 DMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKENSQDLIMSCLGLHWINDLPGAMI 552 D++ +M+ ++ A + +++GD E LP ++ D+ G+ + + A+ Sbjct: 171 DINREMLKVGKQKALARGHTAGLAWVLGDAEELPFDDDRFDVYTIAFGIRNVTHIDRALQ 230 Query: 553 QCRLALKPDGLFL 591 + LKP G FL Sbjct: 231 EAHRVLKPGGRFL 243
>Q83PS8:TREF_SHIFL Cytoplasmic trehalase - Shigella flexneri| Length = 549 Score = 32.0 bits (71), Expect = 7.0 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = +1 Query: 700 VRDAGNLLSRAGFALPGVDVDRYTVKYNSALELVEHLRAMAETNALFQRSPILKRD 867 +RD G L S +D++ + K SA+ + L+ ET ALF++ +RD Sbjct: 332 LRDTGRLASIRTTQFIPIDLNAFLFKLESAIANISALKGEKETEALFRQKASARRD 387
>P62601:TREF_ECOLI Cytoplasmic trehalase - Escherichia coli| Length = 549 Score = 32.0 bits (71), Expect = 7.0 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = +1 Query: 700 VRDAGNLLSRAGFALPGVDVDRYTVKYNSALELVEHLRAMAETNALFQRSPILKRD 867 +RD G L S +D++ + K SA+ + L+ ET ALF++ +RD Sbjct: 332 LRDTGRLASIRTTQFIPIDLNAFLFKLESAIANISALKGEKETEALFRQKASARRD 387
>Q8FCI4:TREF_ECOL6 Cytoplasmic trehalase - Escherichia coli O6| Length = 549 Score = 32.0 bits (71), Expect = 7.0 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = +1 Query: 700 VRDAGNLLSRAGFALPGVDVDRYTVKYNSALELVEHLRAMAETNALFQRSPILKRD 867 +RD G L S +D++ + K SA+ + L+ ET ALF++ +RD Sbjct: 332 LRDTGRLASIRTTQFIPIDLNAFLFKLESAIANISALKGEKETEALFRQKASARRD 387
>P62602:TREF_ECO57 Cytoplasmic trehalase - Escherichia coli O157:H7| Length = 549 Score = 32.0 bits (71), Expect = 7.0 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = +1 Query: 700 VRDAGNLLSRAGFALPGVDVDRYTVKYNSALELVEHLRAMAETNALFQRSPILKRD 867 +RD G L S +D++ + K SA+ + L+ ET ALF++ +RD Sbjct: 332 LRDTGRLASIRTTQFIPIDLNAFLFKLESAIANISALKGEKETEALFRQKASARRD 387
>Q9HQL9:SYC_HALSA Cysteinyl-tRNA synthetase - Halobacterium salinarium (Halobacterium| halobium) Length = 494 Score = 32.0 bits (71), Expect = 7.0 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = -3 Query: 378 HVHHGQFLDSTAATKRPADGAGRTAEAECRGE 283 H +DS AA +PAD A RTA A+ RGE Sbjct: 344 HERAADAIDSVAAHAKPADDALRTAVADARGE 375
>Q92093:VIT_ONCMY Vitellogenin precursor - Oncorhynchus mykiss (Rainbow trout) (Salmo| gairdneri) Length = 1659 Score = 31.6 bits (70), Expect = 9.2 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 14/90 (15%) Frame = -3 Query: 1260 QGMSRSTQMHRRRIVSDARGASANFGGN---QHSTLFLQMGSLGSP-----------KLC 1123 QG++RSTQ R ++ S ++A+F G+ L+ + S P +C Sbjct: 934 QGVARSTQQSRDKLTSMIADSAASFAGSLSRSSEILYSDLPSNFKPIIKAIVVHLEETIC 993 Query: 1122 CEQLGVFFSFLKRCFHIR*SSSVLVGTKLF 1033 E+LGV K CF S+ + LF Sbjct: 994 VERLGV-----KACFEFTSESAAFIRNTLF 1018
>P59911:UBIE_HAEDU Ubiquinone/menaquinone biosynthesis methyltransferase ubiE -| Haemophilus ducreyi Length = 259 Score = 31.6 bits (70), Expect = 9.2 Identities = 21/96 (21%), Positives = 42/96 (43%) Frame = +1 Query: 304 GGSAGAVRRSLRGRGGIEKLTMMDMSVDMVNKWRELESATDDGPEMHFIVGDEEYLPIKE 483 GG+ + R G ++ + D++ M+ R+ ++++ + E+LP + Sbjct: 80 GGTGDFSAKFSRIVGETGQVVLADINSSMLEVGRDKLRNLGVVGNINYVQANAEHLPFAD 139 Query: 484 NSQDLIMSCLGLHWINDLPGAMIQCRLALKPDGLFL 591 N+ D ++ GL + D A+ LKP G L Sbjct: 140 NTFDCVVISFGLRNVTDKDKALKSMYRVLKPGGRLL 175
>Q89WD0:UBIE_BRAJA Ubiquinone/menaquinone biosynthesis methyltransferase ubiE -| Bradyrhizobium japonicum Length = 253 Score = 31.6 bits (70), Expect = 9.2 Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 2/118 (1%) Frame = +1 Query: 244 DNLLDRLEDCRKAFPSAFC--LGGSAGAVRRSLRGRGGIEKLTMMDMSVDMVNKWRELES 417 D +++ L+ R P A GG+ R+ + G T+ D++ DM+ RE + Sbjct: 52 DIMINALDPPRGDRPFALLDVAGGTGDISFRAAKAAGPGFHATVCDINSDMLAVGRERAA 111 Query: 418 ATDDGPEMHFIVGDEEYLPIKENSQDLIMSCLGLHWINDLPGAMIQCRLALKPDGLFL 591 ++ F+ G+ E L + S D G+ + + A+ + L+P FL Sbjct: 112 KRHLETQVDFVEGNAEALAFADRSFDAYTIAFGIRNVPQIDLALREAYRVLRPGSRFL 169 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 272,160,303 Number of extensions: 6256163 Number of successful extensions: 17338 Number of sequences better than 10.0: 46 Number of HSP's gapped: 17329 Number of HSP's successfully gapped: 46 Length of query: 505 Length of database: 100,686,439 Length adjustment: 118 Effective length of query: 387 Effective length of database: 68,319,629 Effective search space: 26439696423 Effective search space used: 26439696423 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
