Clone Name | FLbaf99o05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AK100797:Os08g0431500 | 202 | 2e-52 | 2 | AK058993:Os08g0431500 | 85 | 4e-17 | 3 | AK063088: | 74 | 9e-14 | 4 | AK111322:Os11g0241200 | 33 | 0.14 | 5 | Os04g0210700:Os04g0210700 | 31 | 0.69 | 6 | AK071918:Os07g0227200 | 31 | 0.69 | 7 | AK072534:Os04g0659500 | 28 | 7.6 | 8 | AK072124:Os02g0641800 | 28 | 7.6 | 9 | Os12g0176600:Os12g0176600 | 27 | 10.0 |
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>AK100797:Os08g0431500 | Length = 138 Score = 202 bits (513), Expect = 2e-52 Identities = 104/125 (83%), Positives = 110/125 (88%), Gaps = 2/125 (1%) Frame = +1 Query: 28 LLPATKSAAAPPTGIDPRDCA--MNTDITASVKPEYPVVDRNPAFTKVVGNFSALDYMRL 201 L A +A A G +P+ MNTDITASVKPEYPVVDRNP FTKVVGNFSALDY+RL Sbjct: 14 LAAAAAAATAKRGGSNPQPPRGEMNTDITASVKPEYPVVDRNPPFTKVVGNFSALDYLRL 73 Query: 202 STISAVSVTVGYLSGIKPGIRGPSMVTGGLIGVLGGFMYAYQNSAGRLMGFFPNESEVAR 381 STISAVSVTVGYLSGIKPGIRGPSMVTGGLIGV+GGFMYAYQNSAGRLMGFFPN+SEVAR Sbjct: 74 STISAVSVTVGYLSGIKPGIRGPSMVTGGLIGVMGGFMYAYQNSAGRLMGFFPNDSEVAR 133 Query: 382 YKYKL 396 YKYKL Sbjct: 134 YKYKL 138
>AK058993:Os08g0431500 | Length = 41 Score = 85.1 bits (209), Expect = 4e-17 Identities = 39/41 (95%), Positives = 41/41 (100%) Frame = +1 Query: 274 MVTGGLIGVLGGFMYAYQNSAGRLMGFFPNESEVARYKYKL 396 MVTGGLIGV+GGFMYAYQNSAGRLMGFFPN+SEVARYKYKL Sbjct: 1 MVTGGLIGVMGGFMYAYQNSAGRLMGFFPNDSEVARYKYKL 41
>AK063088: | Length = 104 Score = 73.9 bits (180), Expect = 9e-14 Identities = 35/90 (38%), Positives = 57/90 (63%), Gaps = 2/90 (2%) Frame = +1 Query: 121 PEYPVVDRNPAFTKVVGNFSALDYMRLSTISAVSVTVGYLSGIK--PGIRGPSMVTGGLI 294 P +PV+ ++P + NF+ DY+R + ++A+S +GY+ G+K + PSMV G++ Sbjct: 10 PRFPVIVQHPTYADSRANFNGSDYLRWAGLTALSFPLGYVFGVKVHKRVAVPSMVVTGVL 69 Query: 295 GVLGGFMYAYQNSAGRLMGFFPNESEVARY 384 G GGF+ AYQ+S+ RL G N+ EV +Y Sbjct: 70 GSFGGFLLAYQSSSFRLQGRLENDGEVRKY 99
>AK111322:Os11g0241200 | Length = 164 Score = 33.5 bits (75), Expect = 0.14 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = +2 Query: 320 PTRTPPDA*WDSSPTNPRSRATSTSCSGRRRH-RFSPFLYRKC 445 P+R+PP A S P+ PR RA T RRR R + L R+C Sbjct: 80 PSRSPPPATGSSLPSPPRPRAARTGAGTRRRRPRGTRSLRRRC 122
>Os04g0210700:Os04g0210700 | Length = 413 Score = 31.2 bits (69), Expect = 0.69 Identities = 23/69 (33%), Positives = 30/69 (43%) Frame = -1 Query: 218 TAEMVERRM*SSAEKLPTTLVKAGFRSTTGYSGFTDAVMSVFIAQSRGSIPVGGAAADLV 39 T VERR+ E+ ++G R G G AV + A RG+ P+GG Sbjct: 176 TGSAVERRLPGQGERR-----RSGSRRRAG-GGNAVAVSILVAAARRGTAPLGGRGGSKA 229 Query: 38 AGRRRSRFR 12 GRR R R Sbjct: 230 TGRRARRRR 238
>AK071918:Os07g0227200 | Length = 223 Score = 31.2 bits (69), Expect = 0.69 Identities = 18/41 (43%), Positives = 22/41 (53%) Frame = +2 Query: 326 RTPPDA*WDSSPTNPRSRATSTSCSGRRRHRFSPFLYRKCC 448 R PP PT P SR+TS+S S R R +P R+CC Sbjct: 137 RRPPPPRPSRWPTPPSSRSTSSSASSRAR--VAPRRARRCC 175
>AK072534:Os04g0659500 | Length = 282 Score = 27.7 bits (60), Expect = 7.6 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 Query: 229 VGYLSGIKPGIRGPSMVTGGLIGVLGGFMYAYQNSAGR 342 +GYLS + P P V+GG + G F Y Y +S G+ Sbjct: 1 MGYLSSVIPTDGSP--VSGGGLSQNGKFSYGYASSPGK 36
>AK072124:Os02g0641800 | Length = 508 Score = 27.7 bits (60), Expect = 7.6 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = +3 Query: 63 YRNRSPRLRDEHRHHRVSEAGVP 131 Y NR P L+ +H HH+ + P Sbjct: 21 YYNRGPPLQQQHNHHQQQQTSAP 43
>Os12g0176600:Os12g0176600 | Length = 56 Score = 27.3 bits (59), Expect = 10.0 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 5/47 (10%) Frame = +2 Query: 293 LGSWEGSCTPTRTPPDA*WDSSPTNP-----RSRATSTSCSGRRRHR 418 LG GS + TRTPP ++PT P R R T+T+ + RR R Sbjct: 2 LGPSGGSGSATRTPPR---PTTPTTPTPRWLRRRTTTTTTTTRRSTR 45 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 19,969,799 Number of extensions: 476681 Number of successful extensions: 1873 Number of sequences better than 10.0: 9 Number of HSP's gapped: 1868 Number of HSP's successfully gapped: 9 Length of query: 229 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 132 Effective length of database: 11,515,878 Effective search space: 1520095896 Effective search space used: 1520095896 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)