ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf99o05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK100797:Os08g0431500 202 2e-52
2AK058993:Os08g0431500 85 4e-17
3AK063088: 74 9e-14
4AK111322:Os11g0241200 33 0.14
5Os04g0210700:Os04g0210700 31 0.69
6AK071918:Os07g0227200 31 0.69
7AK072534:Os04g0659500 28 7.6
8AK072124:Os02g0641800 28 7.6
9Os12g0176600:Os12g0176600 27 10.0

>AK100797:Os08g0431500 |
          Length = 138
 Score =  202 bits (513), Expect = 2e-52
 Identities = 104/125 (83%), Positives = 110/125 (88%), Gaps = 2/125 (1%)
 Frame = +1

Query: 28  LLPATKSAAAPPTGIDPRDCA--MNTDITASVKPEYPVVDRNPAFTKVVGNFSALDYMRL 201
           L  A  +A A   G +P+     MNTDITASVKPEYPVVDRNP FTKVVGNFSALDY+RL
Sbjct: 14  LAAAAAAATAKRGGSNPQPPRGEMNTDITASVKPEYPVVDRNPPFTKVVGNFSALDYLRL 73

Query: 202 STISAVSVTVGYLSGIKPGIRGPSMVTGGLIGVLGGFMYAYQNSAGRLMGFFPNESEVAR 381
           STISAVSVTVGYLSGIKPGIRGPSMVTGGLIGV+GGFMYAYQNSAGRLMGFFPN+SEVAR
Sbjct: 74  STISAVSVTVGYLSGIKPGIRGPSMVTGGLIGVMGGFMYAYQNSAGRLMGFFPNDSEVAR 133

Query: 382 YKYKL 396
           YKYKL
Sbjct: 134 YKYKL 138



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>AK058993:Os08g0431500 |
          Length = 41

 Score = 85.1 bits (209), Expect = 4e-17
 Identities = 39/41 (95%), Positives = 41/41 (100%)
 Frame = +1

Query: 274 MVTGGLIGVLGGFMYAYQNSAGRLMGFFPNESEVARYKYKL 396
           MVTGGLIGV+GGFMYAYQNSAGRLMGFFPN+SEVARYKYKL
Sbjct: 1   MVTGGLIGVMGGFMYAYQNSAGRLMGFFPNDSEVARYKYKL 41



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>AK063088: |
          Length = 104

 Score = 73.9 bits (180), Expect = 9e-14
 Identities = 35/90 (38%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
 Frame = +1

Query: 121 PEYPVVDRNPAFTKVVGNFSALDYMRLSTISAVSVTVGYLSGIK--PGIRGPSMVTGGLI 294
           P +PV+ ++P +     NF+  DY+R + ++A+S  +GY+ G+K    +  PSMV  G++
Sbjct: 10  PRFPVIVQHPTYADSRANFNGSDYLRWAGLTALSFPLGYVFGVKVHKRVAVPSMVVTGVL 69

Query: 295 GVLGGFMYAYQNSAGRLMGFFPNESEVARY 384
           G  GGF+ AYQ+S+ RL G   N+ EV +Y
Sbjct: 70  GSFGGFLLAYQSSSFRLQGRLENDGEVRKY 99



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>AK111322:Os11g0241200 |
          Length = 164

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +2

Query: 320 PTRTPPDA*WDSSPTNPRSRATSTSCSGRRRH-RFSPFLYRKC 445
           P+R+PP A   S P+ PR RA  T    RRR  R +  L R+C
Sbjct: 80  PSRSPPPATGSSLPSPPRPRAARTGAGTRRRRPRGTRSLRRRC 122



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>Os04g0210700:Os04g0210700 |
          Length = 413

 Score = 31.2 bits (69), Expect = 0.69
 Identities = 23/69 (33%), Positives = 30/69 (43%)
 Frame = -1

Query: 218 TAEMVERRM*SSAEKLPTTLVKAGFRSTTGYSGFTDAVMSVFIAQSRGSIPVGGAAADLV 39
           T   VERR+    E+      ++G R   G  G   AV  +  A  RG+ P+GG      
Sbjct: 176 TGSAVERRLPGQGERR-----RSGSRRRAG-GGNAVAVSILVAAARRGTAPLGGRGGSKA 229

Query: 38  AGRRRSRFR 12
            GRR  R R
Sbjct: 230 TGRRARRRR 238



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>AK071918:Os07g0227200 |
          Length = 223

 Score = 31.2 bits (69), Expect = 0.69
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = +2

Query: 326 RTPPDA*WDSSPTNPRSRATSTSCSGRRRHRFSPFLYRKCC 448
           R PP       PT P SR+TS+S S R R   +P   R+CC
Sbjct: 137 RRPPPPRPSRWPTPPSSRSTSSSASSRAR--VAPRRARRCC 175



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>AK072534:Os04g0659500 |
          Length = 282

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 229 VGYLSGIKPGIRGPSMVTGGLIGVLGGFMYAYQNSAGR 342
           +GYLS + P    P  V+GG +   G F Y Y +S G+
Sbjct: 1   MGYLSSVIPTDGSP--VSGGGLSQNGKFSYGYASSPGK 36



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>AK072124:Os02g0641800 |
          Length = 508

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 63  YRNRSPRLRDEHRHHRVSEAGVP 131
           Y NR P L+ +H HH+  +   P
Sbjct: 21  YYNRGPPLQQQHNHHQQQQTSAP 43



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>Os12g0176600:Os12g0176600 |
          Length = 56

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
 Frame = +2

Query: 293 LGSWEGSCTPTRTPPDA*WDSSPTNP-----RSRATSTSCSGRRRHR 418
           LG   GS + TRTPP     ++PT P     R R T+T+ + RR  R
Sbjct: 2   LGPSGGSGSATRTPPR---PTTPTTPTPRWLRRRTTTTTTTTRRSTR 45


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 19,969,799
Number of extensions: 476681
Number of successful extensions: 1873
Number of sequences better than 10.0: 9
Number of HSP's gapped: 1868
Number of HSP's successfully gapped: 9
Length of query: 229
Length of database: 15,399,855
Length adjustment: 97
Effective length of query: 132
Effective length of database: 11,515,878
Effective search space: 1520095896
Effective search space used: 1520095896
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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