Clone Name | FLbaf99o05 |
---|---|
Clone Library Name | barley_pub |
>emb|CT831135.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA024F23, full insert sequence Length = 639 Score = 492 bits (248), Expect = e-136 Identities = 296/312 (94%) Strand = Plus / Plus Query: 90 gatgaacaccgacatcaccgcgtcagtgaagccggagtacccggtggtggatcggaaccc 149 |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 92 gatgaacaccgacatcaccgcgtcggtgaagccggagtacccggtggtggaccggaaccc 151 Query: 150 ggccttcaccaaggtcgtcggcaacttctccgcgctcgactacatgcgcctctccaccat 209 | ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 152 gcccttcaccaaggtcgtcggcaacttctccgcgctcgactacctccgcctctccaccat 211 Query: 210 ctccgccgtctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggcc 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 ctccgccgtctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggcc 271 Query: 270 gtcaatggtgacggggggcctcattggggtcctgggagggttcatgtacgcctaccagaa 329 || ||||||||||| || ||||| |||||| |||||||||||||||||||||||||||| Sbjct: 272 atcgatggtgacgggagggctcatcggggtcatgggagggttcatgtacgcctaccagaa 331 Query: 330 ctccgccggacgcctgatgggattcttccccaacgaatccgaggtcgcgcgctacaagta 389 ||||||||| ||||| ||||| |||||||||||||| ||||||||||| ||||||||||| Sbjct: 332 ctccgccggccgcctcatgggcttcttccccaacgactccgaggtcgcccgctacaagta 391 Query: 390 caagctgtagtg 401 |||||||||||| Sbjct: 392 caagctgtagtg 403
>emb|CT831134.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA014B16, full insert sequence Length = 768 Score = 492 bits (248), Expect = e-136 Identities = 296/312 (94%) Strand = Plus / Plus Query: 90 gatgaacaccgacatcaccgcgtcagtgaagccggagtacccggtggtggatcggaaccc 149 |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 229 gatgaacaccgacatcaccgcgtcggtgaagccggagtacccggtggtggaccggaaccc 288 Query: 150 ggccttcaccaaggtcgtcggcaacttctccgcgctcgactacatgcgcctctccaccat 209 | ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 289 gcccttcaccaaggtcgtcggcaacttctccgcgctcgactacctccgcctctccaccat 348 Query: 210 ctccgccgtctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggcc 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 ctccgccgtctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggcc 408 Query: 270 gtcaatggtgacggggggcctcattggggtcctgggagggttcatgtacgcctaccagaa 329 || ||||||||||| || ||||| |||||| |||||||||||||||||||||||||||| Sbjct: 409 atcgatggtgacgggagggctcatcggggtcatgggagggttcatgtacgcctaccagaa 468 Query: 330 ctccgccggacgcctgatgggattcttccccaacgaatccgaggtcgcgcgctacaagta 389 ||||||||| ||||| ||||| |||||||||||||| ||||||||||| ||||||||||| Sbjct: 469 ctccgccggccgcctcatgggcttcttccccaacgactccgaggtcgcccgctacaagta 528 Query: 390 caagctgtagtg 401 |||||||||||| Sbjct: 529 caagctgtagtg 540
>ref|NM_001068398.1| Oryza sativa (japonica cultivar-group) Os08g0431500 (Os08g0431500) mRNA, partial cds Length = 648 Score = 484 bits (244), Expect = e-133 Identities = 295/312 (94%) Strand = Plus / Plus Query: 90 gatgaacaccgacatcaccgcgtcagtgaagccggagtacccggtggtggatcggaaccc 149 |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 110 gatgaacaccgacatcaccgcgtcggtgaagccggagtacccggtggtggaccggaaccc 169 Query: 150 ggccttcaccaaggtcgtcggcaacttctccgcgctcgactacatgcgcctctccaccat 209 | |||||||||||||||||||||| |||||||||||||||||| | |||||||||||||| Sbjct: 170 gcccttcaccaaggtcgtcggcaatttctccgcgctcgactacctccgcctctccaccat 229 Query: 210 ctccgccgtctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggcc 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 ctccgccgtctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggcc 289 Query: 270 gtcaatggtgacggggggcctcattggggtcctgggagggttcatgtacgcctaccagaa 329 || ||||||||||| || ||||| |||||| |||||||||||||||||||||||||||| Sbjct: 290 atcgatggtgacgggagggctcatcggggtcatgggagggttcatgtacgcctaccagaa 349 Query: 330 ctccgccggacgcctgatgggattcttccccaacgaatccgaggtcgcgcgctacaagta 389 ||||||||| ||||| ||||| |||||||||||||| ||||||||||| ||||||||||| Sbjct: 350 ctccgccggccgcctcatgggcttcttccccaacgactccgaggtcgcccgctacaagta 409 Query: 390 caagctgtagtg 401 |||||||||||| Sbjct: 410 caagctgtagtg 421
>dbj|AK100797.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121F15, full insert sequence Length = 649 Score = 484 bits (244), Expect = e-133 Identities = 295/312 (94%) Strand = Plus / Plus Query: 90 gatgaacaccgacatcaccgcgtcagtgaagccggagtacccggtggtggatcggaaccc 149 |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 111 gatgaacaccgacatcaccgcgtcggtgaagccggagtacccggtggtggaccggaaccc 170 Query: 150 ggccttcaccaaggtcgtcggcaacttctccgcgctcgactacatgcgcctctccaccat 209 | |||||||||||||||||||||| |||||||||||||||||| | |||||||||||||| Sbjct: 171 gcccttcaccaaggtcgtcggcaatttctccgcgctcgactacctccgcctctccaccat 230 Query: 210 ctccgccgtctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggcc 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 ctccgccgtctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggcc 290 Query: 270 gtcaatggtgacggggggcctcattggggtcctgggagggttcatgtacgcctaccagaa 329 || ||||||||||| || ||||| |||||| |||||||||||||||||||||||||||| Sbjct: 291 atcgatggtgacgggagggctcatcggggtcatgggagggttcatgtacgcctaccagaa 350 Query: 330 ctccgccggacgcctgatgggattcttccccaacgaatccgaggtcgcgcgctacaagta 389 ||||||||| ||||| ||||| |||||||||||||| ||||||||||| ||||||||||| Sbjct: 351 ctccgccggccgcctcatgggcttcttccccaacgactccgaggtcgcccgctacaagta 410 Query: 390 caagctgtagtg 401 |||||||||||| Sbjct: 411 caagctgtagtg 422
>gb|DQ245261.1| Zea mays clone 14095 mRNA sequence Length = 646 Score = 438 bits (221), Expect = e-119 Identities = 287/309 (92%) Strand = Plus / Plus Query: 87 cgcgatgaacaccgacatcaccgcgtcagtgaagccggagtacccggtggtggatcggaa 146 |||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 82 cgcgatgaacaccgacatcaccgcctcgactaagccggagtacccggtggtggatcggaa 141 Query: 147 cccggccttcaccaaggtcgtcggcaacttctccgcgctcgactacatgcgcctctccac 206 |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 142 cccggccttcaccaaggtggtcggcaacttctctgcgctcgactacatgcgcctctccac 201 Query: 207 catctccgccgtctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgg 266 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 202 catctccgccgtctccgtcaccgttggctacctctccgggatcaagccggggatccgggg 261 Query: 267 gccgtcaatggtgacggggggcctcattggggtcctgggagggttcatgtacgcctacca 326 ||||| ||||| ||||| |||||||| |||||| ||||||||||||||||||||||||| Sbjct: 262 cccgtcgatggtcacgggcggcctcatcggggtcatgggagggttcatgtacgcctacca 321 Query: 327 gaactccgccggacgcctgatgggattcttccccaacgaatccgaggtcgcgcgctacaa 386 |||||||||||| ||||| ||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 322 gaactccgccgggcgcctaatgggattctttcccaacgacgccgaggttgcgcgctacaa 381 Query: 387 gtacaagct 395 | ||||||| Sbjct: 382 gcacaagct 390
>gb|AY106611.1| Zea mays PCO079496 mRNA sequence Length = 674 Score = 438 bits (221), Expect = e-119 Identities = 287/309 (92%) Strand = Plus / Plus Query: 87 cgcgatgaacaccgacatcaccgcgtcagtgaagccggagtacccggtggtggatcggaa 146 |||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 78 cgcgatgaacaccgacatcaccgcctcgactaagccggagtacccggtggtggatcggaa 137 Query: 147 cccggccttcaccaaggtcgtcggcaacttctccgcgctcgactacatgcgcctctccac 206 |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 138 cccggccttcaccaaggtggtcggcaacttctctgcgctcgactacatgcgcctctccac 197 Query: 207 catctccgccgtctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgg 266 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 198 catctccgccgtctccgtcaccgttggctacctctccgggatcaagccggggatccgggg 257 Query: 267 gccgtcaatggtgacggggggcctcattggggtcctgggagggttcatgtacgcctacca 326 ||||| ||||| ||||| |||||||| |||||| ||||||||||||||||||||||||| Sbjct: 258 cccgtcgatggtcacgggcggcctcatcggggtcatgggagggttcatgtacgcctacca 317 Query: 327 gaactccgccggacgcctgatgggattcttccccaacgaatccgaggtcgcgcgctacaa 386 |||||||||||| ||||| ||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 318 gaactccgccgggcgcctaatgggattctttcccaacgacgccgaggttgcgcgctacaa 377 Query: 387 gtacaagct 395 | ||||||| Sbjct: 378 gcacaagct 386
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 262 bits (132), Expect = 1e-66 Identities = 150/156 (96%) Strand = Plus / Plus Query: 90 gatgaacaccgacatcaccgcgtcagtgaagccggagtacccggtggtggatcggaaccc 149 |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 20866455 gatgaacaccgacatcaccgcgtcggtgaagccggagtacccggtggtggaccggaaccc 20866514 Query: 150 ggccttcaccaaggtcgtcggcaacttctccgcgctcgactacatgcgcctctccaccat 209 | |||||||||||||||||||||| |||||||||||||||||| | |||||||||||||| Sbjct: 20866515 gcccttcaccaaggtcgtcggcaatttctccgcgctcgactacctccgcctctccaccat 20866574 Query: 210 ctccgccgtctccgtcaccgtcggctacctctccgg 245 |||||||||||||||||||||||||||||||||||| Sbjct: 20866575 ctccgccgtctccgtcaccgtcggctacctctccgg 20866610 Score = 226 bits (114), Expect = 8e-56 Identities = 147/158 (93%) Strand = Plus / Plus Query: 244 gggatcaagccggggatccgcgggccgtcaatggtgacggggggcctcattggggtcctg 303 |||||||||||||||||||||||||| || ||||||||||| || ||||| |||||| || Sbjct: 20866684 gggatcaagccggggatccgcgggccatcgatggtgacgggagggctcatcggggtcatg 20866743 Query: 304 ggagggttcatgtacgcctaccagaactccgccggacgcctgatgggattcttccccaac 363 ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| Sbjct: 20866744 ggagggttcatgtacgcctaccagaactccgccggccgcctcatgggcttcttccccaac 20866803 Query: 364 gaatccgaggtcgcgcgctacaagtacaagctgtagtg 401 || ||||||||||| ||||||||||||||||||||||| Sbjct: 20866804 gactccgaggtcgcccgctacaagtacaagctgtagtg 20866841
>dbj|AP003868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_B08 Length = 131184 Score = 262 bits (132), Expect = 1e-66 Identities = 150/156 (96%) Strand = Plus / Plus Query: 90 gatgaacaccgacatcaccgcgtcagtgaagccggagtacccggtggtggatcggaaccc 149 |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 44756 gatgaacaccgacatcaccgcgtcggtgaagccggagtacccggtggtggaccggaaccc 44815 Query: 150 ggccttcaccaaggtcgtcggcaacttctccgcgctcgactacatgcgcctctccaccat 209 | |||||||||||||||||||||| |||||||||||||||||| | |||||||||||||| Sbjct: 44816 gcccttcaccaaggtcgtcggcaatttctccgcgctcgactacctccgcctctccaccat 44875 Query: 210 ctccgccgtctccgtcaccgtcggctacctctccgg 245 |||||||||||||||||||||||||||||||||||| Sbjct: 44876 ctccgccgtctccgtcaccgtcggctacctctccgg 44911 Score = 226 bits (114), Expect = 8e-56 Identities = 147/158 (93%) Strand = Plus / Plus Query: 244 gggatcaagccggggatccgcgggccgtcaatggtgacggggggcctcattggggtcctg 303 |||||||||||||||||||||||||| || ||||||||||| || ||||| |||||| || Sbjct: 44985 gggatcaagccggggatccgcgggccatcgatggtgacgggagggctcatcggggtcatg 45044 Query: 304 ggagggttcatgtacgcctaccagaactccgccggacgcctgatgggattcttccccaac 363 ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| Sbjct: 45045 ggagggttcatgtacgcctaccagaactccgccggccgcctcatgggcttcttccccaac 45104 Query: 364 gaatccgaggtcgcgcgctacaagtacaagctgtagtg 401 || ||||||||||| ||||||||||||||||||||||| Sbjct: 45105 gactccgaggtcgcccgctacaagtacaagctgtagtg 45142
>dbj|AP003881.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1124_B05 Length = 109917 Score = 262 bits (132), Expect = 1e-66 Identities = 150/156 (96%) Strand = Plus / Plus Query: 90 gatgaacaccgacatcaccgcgtcagtgaagccggagtacccggtggtggatcggaaccc 149 |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 97588 gatgaacaccgacatcaccgcgtcggtgaagccggagtacccggtggtggaccggaaccc 97647 Query: 150 ggccttcaccaaggtcgtcggcaacttctccgcgctcgactacatgcgcctctccaccat 209 | |||||||||||||||||||||| |||||||||||||||||| | |||||||||||||| Sbjct: 97648 gcccttcaccaaggtcgtcggcaatttctccgcgctcgactacctccgcctctccaccat 97707 Query: 210 ctccgccgtctccgtcaccgtcggctacctctccgg 245 |||||||||||||||||||||||||||||||||||| Sbjct: 97708 ctccgccgtctccgtcaccgtcggctacctctccgg 97743 Score = 226 bits (114), Expect = 8e-56 Identities = 147/158 (93%) Strand = Plus / Plus Query: 244 gggatcaagccggggatccgcgggccgtcaatggtgacggggggcctcattggggtcctg 303 |||||||||||||||||||||||||| || ||||||||||| || ||||| |||||| || Sbjct: 97817 gggatcaagccggggatccgcgggccatcgatggtgacgggagggctcatcggggtcatg 97876 Query: 304 ggagggttcatgtacgcctaccagaactccgccggacgcctgatgggattcttccccaac 363 ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| Sbjct: 97877 ggagggttcatgtacgcctaccagaactccgccggccgcctcatgggcttcttccccaac 97936 Query: 364 gaatccgaggtcgcgcgctacaagtacaagctgtagtg 401 || ||||||||||| ||||||||||||||||||||||| Sbjct: 97937 gactccgaggtcgcccgctacaagtacaagctgtagtg 97974
>dbj|AK058993.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-F11, full insert sequence Length = 413 Score = 182 bits (92), Expect = 1e-42 Identities = 119/128 (92%) Strand = Plus / Plus Query: 274 atggtgacggggggcctcattggggtcctgggagggttcatgtacgcctaccagaactcc 333 ||||||||||| || ||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 4 atggtgacgggagggctcatcggggtcatgggagggttcatgtacgcctaccagaactcc 63 Query: 334 gccggacgcctgatgggattcttccccaacgaatccgaggtcgcgcgctacaagtacaag 393 ||||| ||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 64 gccggccgcctcatgggcttcttccccaacgactccgaggtcgcccgctacaagtacaag 123 Query: 394 ctgtagtg 401 |||||||| Sbjct: 124 ctgtagtg 131
>dbj|AP006668.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT16B20, TM0367, complete sequence Length = 112717 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 118 aagccggagtacccggtggtggatcggaacccggccttcaccaaggtcgtcggcaacttc 177 ||||| |||||||| || | ||||| ||||| |||||||||| ||||||||||||||| Sbjct: 102946 aagccagagtaccccgtcattgatcgcaaccctcccttcaccaacgtcgtcggcaacttc 102887 Query: 178 tccgcgctcgactacatgcgcctctccaccatctccgccgtctccgtcaccgtcggctac 237 | | |||||||| | ||| || ||||||| ||| ||| |||||||||||||||||| Sbjct: 102886 aacaccctcgactatctccgcttcgtcaccatcaccggcgtttccgtcaccgtcggctac 102827 Query: 238 ctctccgg 245 |||||||| Sbjct: 102826 ctctccgg 102819 Score = 48.1 bits (24), Expect = 0.042 Identities = 48/56 (85%) Strand = Plus / Minus Query: 310 ttcatgtacgcctaccagaactccgccggacgcctgatgggattcttccccaacga 365 ||||||||||| ||||||||||| || || | || ||||| |||||||||||||| Sbjct: 102662 ttcatgtacgcttaccagaactcagctggtagactcatgggtttcttccccaacga 102607
>gb|AC189632.1| Brassica rapa subsp. pekinensis clone KBrS003O10, complete sequence Length = 118656 Score = 77.8 bits (39), Expect = 5e-11 Identities = 111/135 (82%) Strand = Plus / Plus Query: 244 gggatcaagccggggatccgcgggccgtcaatggtgacggggggcctcattggggtcctg 303 ||||||||||| |||||| || ||||| ||||||||||| || || || || || || Sbjct: 109674 gggatcaagccagggatcaagggaccgtcgatggtgacgggaggactgatcggactcatg 109733 Query: 304 ggagggttcatgtacgcctaccagaactccgccggacgcctgatgggattcttccccaac 363 ||||||||||||||||| |||||||||||||| || | || ||||| || ||||| ||| Sbjct: 109734 ggagggttcatgtacgcttaccagaactccgcggggaggctcatgggctttttccctaac 109793 Query: 364 gaatccgaggtcgcg 378 ||| |||||||||| Sbjct: 109794 gaaggcgaggtcgcg 109808 Score = 75.8 bits (38), Expect = 2e-10 Identities = 122/150 (81%) Strand = Plus / Plus Query: 90 gatgaacaccgacatcaccgcgtcagtgaagccggagtacccggtggtggatcggaaccc 149 ||||||||| ||||||||||| | | |||||| ||||||| || || ||||||||||| Sbjct: 109430 gatgaacactgacatcaccgccttggagaagccccagtaccccgtcgtcgatcggaaccc 109489 Query: 150 ggccttcaccaaggtcgtcggcaacttctccgcgctcgactacatgcgcctctccaccat 209 | ||||| || |||||||| |||||| || ||||| ||| | || |||||||||| Sbjct: 109490 tccattcacgaaagtcgtcggaaacttcagcgtcctcgattacctccgtttctccaccat 109549 Query: 210 ctccgccgtctccgtcaccgtcggctacct 239 | ||| ||| |||||||||||||||||||| Sbjct: 109550 caccggcgtttccgtcaccgtcggctacct 109579
>dbj|AK227352.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-03-D09 Length = 542 Score = 58.0 bits (29), Expect = 4e-05 Identities = 98/121 (80%) Strand = Plus / Plus Query: 218 tctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggccgtcaatgg 277 ||||||||||||||||||| ||||| ||||| ||||| ||||| || ||||| |||| Sbjct: 175 tctccgtcaccgtcggctatctctctgggattaagcctgggattaagggaccgtcgatgg 234 Query: 278 tgacggggggcctcattggggtcctgggagggttcatgtacgcctaccagaactccgccg 337 | || || || | || ||| || ||||||| |||||||| || ||||||||||| |||| Sbjct: 235 ttactggaggattgatcgggctcatgggaggtttcatgtatgcgtaccagaactctgccg 294 Query: 338 g 338 | Sbjct: 295 g 295
>ref|NM_117743.2| Arabidopsis thaliana unknown protein (AT4G16450) mRNA, complete cds Length = 548 Score = 58.0 bits (29), Expect = 4e-05 Identities = 98/121 (80%) Strand = Plus / Plus Query: 218 tctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggccgtcaatgg 277 ||||||||||||||||||| ||||| ||||| ||||| ||||| || ||||| |||| Sbjct: 178 tctccgtcaccgtcggctatctctctgggattaagcctgggattaagggaccgtcgatgg 237 Query: 278 tgacggggggcctcattggggtcctgggagggttcatgtacgcctaccagaactccgccg 337 | || || || | || ||| || ||||||| |||||||| || ||||||||||| |||| Sbjct: 238 ttactggaggattgatcgggctcatgggaggtttcatgtatgcgtaccagaactctgccg 297 Query: 338 g 338 | Sbjct: 298 g 298
>gb|AY085607.1| Arabidopsis thaliana clone 16090 mRNA, complete sequence Length = 545 Score = 58.0 bits (29), Expect = 4e-05 Identities = 98/121 (80%) Strand = Plus / Plus Query: 218 tctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggccgtcaatgg 277 ||||||||||||||||||| ||||| ||||| ||||| ||||| || ||||| |||| Sbjct: 178 tctccgtcaccgtcggctatctctctgggattaagcctgggattaagggaccgtcgatgg 237 Query: 278 tgacggggggcctcattggggtcctgggagggttcatgtacgcctaccagaactccgccg 337 | || || || | || ||| || ||||||| |||||||| || ||||||||||| |||| Sbjct: 238 ttactggaggattgatcgggctcatgggaggtttcatgtatgcgtaccagaactctgccg 297 Query: 338 g 338 | Sbjct: 298 g 298
>gb|BT004558.1| Arabidopsis thaliana At4g16450 gene, complete cds Length = 321 Score = 58.0 bits (29), Expect = 4e-05 Identities = 98/121 (80%) Strand = Plus / Plus Query: 218 tctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggccgtcaatgg 277 ||||||||||||||||||| ||||| ||||| ||||| ||||| || ||||| |||| Sbjct: 128 tctccgtcaccgtcggctatctctctgggattaagcctgggattaagggaccgtcgatgg 187 Query: 278 tgacggggggcctcattggggtcctgggagggttcatgtacgcctaccagaactccgccg 337 | || || || | || ||| || ||||||| |||||||| || ||||||||||| |||| Sbjct: 188 ttactggaggattgatcgggctcatgggaggtttcatgtatgcgtaccagaactctgccg 247 Query: 338 g 338 | Sbjct: 248 g 248
>emb|BX826421.1|CNS0A4GX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB25ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 518 Score = 58.0 bits (29), Expect = 4e-05 Identities = 98/121 (80%) Strand = Plus / Plus Query: 218 tctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggccgtcaatgg 277 ||||||||||||||||||| ||||| ||||| ||||| ||||| || ||||| |||| Sbjct: 159 tctccgtcaccgtcggctatctctctgggattaagcctgggattaagggaccgtcgatgg 218 Query: 278 tgacggggggcctcattggggtcctgggagggttcatgtacgcctaccagaactccgccg 337 | || || || | || ||| || ||||||| |||||||| || ||||||||||| |||| Sbjct: 219 ttactggaggattgatcgggctcatgggaggtttcatgtatgcgtaccagaactctgccg 278 Query: 338 g 338 | Sbjct: 279 g 279
>ref|NM_180142.1| Arabidopsis thaliana unknown protein (AT2G47390) mRNA, complete cds Length = 3604 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 208 atctccgccgtctccgtcaccg 229 |||||||||||||||||||||| Sbjct: 169 atctccgccgtctccgtcaccg 190
>gb|AY099560.1| Arabidopsis thaliana unknown protein (At2g47390) mRNA, partial cds Length = 1875 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 208 atctccgccgtctccgtcaccg 229 |||||||||||||||||||||| Sbjct: 135 atctccgccgtctccgtcaccg 156
>gb|AC002337.3| Arabidopsis thaliana chromosome 2 clone T8I13 map CIC06C03, complete sequence Length = 88068 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 208 atctccgccgtctccgtcaccg 229 |||||||||||||||||||||| Sbjct: 80473 atctccgccgtctccgtcaccg 80452
>gb|AY064997.1| Arabidopsis thaliana At2g47390/T8I13.23 mRNA, complete cds Length = 3171 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 208 atctccgccgtctccgtcaccg 229 |||||||||||||||||||||| Sbjct: 169 atctccgccgtctccgtcaccg 190
>gb|AC004129.2| Homo sapiens BAC clone CTB-136N17 from 7, complete sequence Length = 162701 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 gcatctttccttttatctttct 468 |||||||||||||||||||||| Sbjct: 59617 gcatctttccttttatctttct 59638
>gb|BT002650.1| Arabidopsis thaliana At2g47390/T8I13.23 gene, complete cds Length = 2883 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 208 atctccgccgtctccgtcaccg 229 |||||||||||||||||||||| Sbjct: 57 atctccgccgtctccgtcaccg 78
>emb|BX819726.1|CNS0AA1Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZB02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 3005 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 208 atctccgccgtctccgtcaccg 229 |||||||||||||||||||||| Sbjct: 64 atctccgccgtctccgtcaccg 85
>gb|AC188848.2| Phakopsora pachyrhizi clone JGIAFNA-1121C5, complete sequence Length = 39300 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 457 ttttatctttctctatctaat 477 ||||||||||||||||||||| Sbjct: 18015 ttttatctttctctatctaat 17995
>emb|Z97341.2|ATFCA6 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 6 Length = 213788 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 218 tctccgtcaccgtcggctacctctc 242 ||||||||||||||||||| ||||| Sbjct: 44760 tctccgtcaccgtcggctatctctc 44784 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 302 tgggagggttcatgtacgcctaccagaactccgccgg 338 ||||||| |||||||| || ||||||||||| ||||| Sbjct: 44933 tgggaggtttcatgtatgcgtaccagaactctgccgg 44969
>emb|AL161544.2|ATCHRIV44 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 44 Length = 198735 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 218 tctccgtcaccgtcggctacctctc 242 ||||||||||||||||||| ||||| Sbjct: 22688 tctccgtcaccgtcggctatctctc 22712 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 302 tgggagggttcatgtacgcctaccagaactccgccgg 338 ||||||| |||||||| || ||||||||||| ||||| Sbjct: 22861 tgggaggtttcatgtatgcgtaccagaactctgccgg 22897
>gb|AC169792.2| Rhesus Macaque BAC CH250-117K11 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 186393 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 454 tccttttatctttctctatct 474 ||||||||||||||||||||| Sbjct: 133431 tccttttatctttctctatct 133451 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 102,682,731 Number of extensions: 5639925 Number of successful extensions: 110814 Number of sequences better than 10.0: 28 Number of HSP's gapped: 110810 Number of HSP's successfully gapped: 40 Length of query: 689 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 667 Effective length of database: 18,508,616,841 Effective search space: 12345247432947 Effective search space used: 12345247432947 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)