ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf99o05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|CT831135.1| Oryza sativa (indica cultivar-group) cDNA clone:... 492 e-136
2emb|CT831134.1| Oryza sativa (indica cultivar-group) cDNA clone:... 492 e-136
3ref|NM_001068398.1| Oryza sativa (japonica cultivar-group) Os08g... 484 e-133
4dbj|AK100797.1| Oryza sativa (japonica cultivar-group) cDNA clon... 484 e-133
5gb|DQ245261.1| Zea mays clone 14095 mRNA sequence 438 e-119
6gb|AY106611.1| Zea mays PCO079496 mRNA sequence 438 e-119
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 262 1e-66
8dbj|AP003868.3| Oryza sativa (japonica cultivar-group) genomic D... 262 1e-66
9dbj|AP003881.3| Oryza sativa (japonica cultivar-group) genomic D... 262 1e-66
10dbj|AK058993.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 1e-42
11dbj|AP006668.1| Lotus japonicus genomic DNA, chromosome 6, clone... 80 1e-11
12gb|AC189632.1| Brassica rapa subsp. pekinensis clone KBrS003O10,... 78 5e-11
13dbj|AK227352.1| Arabidopsis thaliana mRNA for hypothetical prote... 58 4e-05
14ref|NM_117743.2| Arabidopsis thaliana unknown protein (AT4G16450... 58 4e-05
15gb|AY085607.1| Arabidopsis thaliana clone 16090 mRNA, complete s... 58 4e-05
16gb|BT004558.1| Arabidopsis thaliana At4g16450 gene, complete cds 58 4e-05
17emb|BX826421.1|CNS0A4GX Arabidopsis thaliana Full-length cDNA Co... 58 4e-05
18ref|NM_180142.1| Arabidopsis thaliana unknown protein (AT2G47390... 44 0.65
19gb|AY099560.1| Arabidopsis thaliana unknown protein (At2g47390) ... 44 0.65
20gb|AC002337.3| Arabidopsis thaliana chromosome 2 clone T8I13 map... 44 0.65
21gb|AY064997.1| Arabidopsis thaliana At2g47390/T8I13.23 mRNA, com... 44 0.65
22gb|AC004129.2| Homo sapiens BAC clone CTB-136N17 from 7, complet... 44 0.65
23gb|BT002650.1| Arabidopsis thaliana At2g47390/T8I13.23 gene, com... 44 0.65
24emb|BX819726.1|CNS0AA1Y Arabidopsis thaliana Full-length cDNA Co... 44 0.65
25gb|AC188848.2| Phakopsora pachyrhizi clone JGIAFNA-1121C5, compl... 42 2.6
26emb|Z97341.2|ATFCA6 Arabidopsis thaliana DNA chromosome 4, ESSA ... 42 2.6
27emb|AL161544.2|ATCHRIV44 Arabidopsis thaliana DNA chromosome 4, ... 42 2.6
28gb|AC169792.2| Rhesus Macaque BAC CH250-117K11 (Children's Hosp... 42 2.6

>emb|CT831135.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA024F23, full
           insert sequence
          Length = 639
 Score =  492 bits (248), Expect = e-136
 Identities = 296/312 (94%)
 Strand = Plus / Plus

                                                                       
Query: 90  gatgaacaccgacatcaccgcgtcagtgaagccggagtacccggtggtggatcggaaccc 149
           |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 92  gatgaacaccgacatcaccgcgtcggtgaagccggagtacccggtggtggaccggaaccc 151

                                                                       
Query: 150 ggccttcaccaaggtcgtcggcaacttctccgcgctcgactacatgcgcctctccaccat 209
           | ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 152 gcccttcaccaaggtcgtcggcaacttctccgcgctcgactacctccgcctctccaccat 211

                                                                       
Query: 210 ctccgccgtctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggcc 269
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ctccgccgtctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggcc 271

                                                                       
Query: 270 gtcaatggtgacggggggcctcattggggtcctgggagggttcatgtacgcctaccagaa 329
            || ||||||||||| || ||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 272 atcgatggtgacgggagggctcatcggggtcatgggagggttcatgtacgcctaccagaa 331

                                                                       
Query: 330 ctccgccggacgcctgatgggattcttccccaacgaatccgaggtcgcgcgctacaagta 389
           ||||||||| ||||| ||||| |||||||||||||| ||||||||||| |||||||||||
Sbjct: 332 ctccgccggccgcctcatgggcttcttccccaacgactccgaggtcgcccgctacaagta 391

                       
Query: 390 caagctgtagtg 401
           ||||||||||||
Sbjct: 392 caagctgtagtg 403



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>emb|CT831134.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA014B16, full
           insert sequence
          Length = 768

 Score =  492 bits (248), Expect = e-136
 Identities = 296/312 (94%)
 Strand = Plus / Plus

                                                                       
Query: 90  gatgaacaccgacatcaccgcgtcagtgaagccggagtacccggtggtggatcggaaccc 149
           |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 229 gatgaacaccgacatcaccgcgtcggtgaagccggagtacccggtggtggaccggaaccc 288

                                                                       
Query: 150 ggccttcaccaaggtcgtcggcaacttctccgcgctcgactacatgcgcctctccaccat 209
           | ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 289 gcccttcaccaaggtcgtcggcaacttctccgcgctcgactacctccgcctctccaccat 348

                                                                       
Query: 210 ctccgccgtctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggcc 269
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ctccgccgtctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggcc 408

                                                                       
Query: 270 gtcaatggtgacggggggcctcattggggtcctgggagggttcatgtacgcctaccagaa 329
            || ||||||||||| || ||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 409 atcgatggtgacgggagggctcatcggggtcatgggagggttcatgtacgcctaccagaa 468

                                                                       
Query: 330 ctccgccggacgcctgatgggattcttccccaacgaatccgaggtcgcgcgctacaagta 389
           ||||||||| ||||| ||||| |||||||||||||| ||||||||||| |||||||||||
Sbjct: 469 ctccgccggccgcctcatgggcttcttccccaacgactccgaggtcgcccgctacaagta 528

                       
Query: 390 caagctgtagtg 401
           ||||||||||||
Sbjct: 529 caagctgtagtg 540



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>ref|NM_001068398.1| Oryza sativa (japonica cultivar-group) Os08g0431500 (Os08g0431500)
           mRNA, partial cds
          Length = 648

 Score =  484 bits (244), Expect = e-133
 Identities = 295/312 (94%)
 Strand = Plus / Plus

                                                                       
Query: 90  gatgaacaccgacatcaccgcgtcagtgaagccggagtacccggtggtggatcggaaccc 149
           |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 110 gatgaacaccgacatcaccgcgtcggtgaagccggagtacccggtggtggaccggaaccc 169

                                                                       
Query: 150 ggccttcaccaaggtcgtcggcaacttctccgcgctcgactacatgcgcctctccaccat 209
           | |||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||
Sbjct: 170 gcccttcaccaaggtcgtcggcaatttctccgcgctcgactacctccgcctctccaccat 229

                                                                       
Query: 210 ctccgccgtctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggcc 269
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ctccgccgtctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggcc 289

                                                                       
Query: 270 gtcaatggtgacggggggcctcattggggtcctgggagggttcatgtacgcctaccagaa 329
            || ||||||||||| || ||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 290 atcgatggtgacgggagggctcatcggggtcatgggagggttcatgtacgcctaccagaa 349

                                                                       
Query: 330 ctccgccggacgcctgatgggattcttccccaacgaatccgaggtcgcgcgctacaagta 389
           ||||||||| ||||| ||||| |||||||||||||| ||||||||||| |||||||||||
Sbjct: 350 ctccgccggccgcctcatgggcttcttccccaacgactccgaggtcgcccgctacaagta 409

                       
Query: 390 caagctgtagtg 401
           ||||||||||||
Sbjct: 410 caagctgtagtg 421



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>dbj|AK100797.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121F15, full
           insert sequence
          Length = 649

 Score =  484 bits (244), Expect = e-133
 Identities = 295/312 (94%)
 Strand = Plus / Plus

                                                                       
Query: 90  gatgaacaccgacatcaccgcgtcagtgaagccggagtacccggtggtggatcggaaccc 149
           |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 111 gatgaacaccgacatcaccgcgtcggtgaagccggagtacccggtggtggaccggaaccc 170

                                                                       
Query: 150 ggccttcaccaaggtcgtcggcaacttctccgcgctcgactacatgcgcctctccaccat 209
           | |||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||
Sbjct: 171 gcccttcaccaaggtcgtcggcaatttctccgcgctcgactacctccgcctctccaccat 230

                                                                       
Query: 210 ctccgccgtctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggcc 269
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ctccgccgtctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggcc 290

                                                                       
Query: 270 gtcaatggtgacggggggcctcattggggtcctgggagggttcatgtacgcctaccagaa 329
            || ||||||||||| || ||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 291 atcgatggtgacgggagggctcatcggggtcatgggagggttcatgtacgcctaccagaa 350

                                                                       
Query: 330 ctccgccggacgcctgatgggattcttccccaacgaatccgaggtcgcgcgctacaagta 389
           ||||||||| ||||| ||||| |||||||||||||| ||||||||||| |||||||||||
Sbjct: 351 ctccgccggccgcctcatgggcttcttccccaacgactccgaggtcgcccgctacaagta 410

                       
Query: 390 caagctgtagtg 401
           ||||||||||||
Sbjct: 411 caagctgtagtg 422



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>gb|DQ245261.1| Zea mays clone 14095 mRNA sequence
          Length = 646

 Score =  438 bits (221), Expect = e-119
 Identities = 287/309 (92%)
 Strand = Plus / Plus

                                                                       
Query: 87  cgcgatgaacaccgacatcaccgcgtcagtgaagccggagtacccggtggtggatcggaa 146
           |||||||||||||||||||||||| ||    |||||||||||||||||||||||||||||
Sbjct: 82  cgcgatgaacaccgacatcaccgcctcgactaagccggagtacccggtggtggatcggaa 141

                                                                       
Query: 147 cccggccttcaccaaggtcgtcggcaacttctccgcgctcgactacatgcgcctctccac 206
           |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 142 cccggccttcaccaaggtggtcggcaacttctctgcgctcgactacatgcgcctctccac 201

                                                                       
Query: 207 catctccgccgtctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgg 266
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 202 catctccgccgtctccgtcaccgttggctacctctccgggatcaagccggggatccgggg 261

                                                                       
Query: 267 gccgtcaatggtgacggggggcctcattggggtcctgggagggttcatgtacgcctacca 326
            ||||| ||||| ||||| |||||||| |||||| |||||||||||||||||||||||||
Sbjct: 262 cccgtcgatggtcacgggcggcctcatcggggtcatgggagggttcatgtacgcctacca 321

                                                                       
Query: 327 gaactccgccggacgcctgatgggattcttccccaacgaatccgaggtcgcgcgctacaa 386
           |||||||||||| ||||| ||||||||||| ||||||||  ||||||| |||||||||||
Sbjct: 322 gaactccgccgggcgcctaatgggattctttcccaacgacgccgaggttgcgcgctacaa 381

                    
Query: 387 gtacaagct 395
           | |||||||
Sbjct: 382 gcacaagct 390



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>gb|AY106611.1| Zea mays PCO079496 mRNA sequence
          Length = 674

 Score =  438 bits (221), Expect = e-119
 Identities = 287/309 (92%)
 Strand = Plus / Plus

                                                                       
Query: 87  cgcgatgaacaccgacatcaccgcgtcagtgaagccggagtacccggtggtggatcggaa 146
           |||||||||||||||||||||||| ||    |||||||||||||||||||||||||||||
Sbjct: 78  cgcgatgaacaccgacatcaccgcctcgactaagccggagtacccggtggtggatcggaa 137

                                                                       
Query: 147 cccggccttcaccaaggtcgtcggcaacttctccgcgctcgactacatgcgcctctccac 206
           |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 138 cccggccttcaccaaggtggtcggcaacttctctgcgctcgactacatgcgcctctccac 197

                                                                       
Query: 207 catctccgccgtctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgg 266
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 198 catctccgccgtctccgtcaccgttggctacctctccgggatcaagccggggatccgggg 257

                                                                       
Query: 267 gccgtcaatggtgacggggggcctcattggggtcctgggagggttcatgtacgcctacca 326
            ||||| ||||| ||||| |||||||| |||||| |||||||||||||||||||||||||
Sbjct: 258 cccgtcgatggtcacgggcggcctcatcggggtcatgggagggttcatgtacgcctacca 317

                                                                       
Query: 327 gaactccgccggacgcctgatgggattcttccccaacgaatccgaggtcgcgcgctacaa 386
           |||||||||||| ||||| ||||||||||| ||||||||  ||||||| |||||||||||
Sbjct: 318 gaactccgccgggcgcctaatgggattctttcccaacgacgccgaggttgcgcgctacaa 377

                    
Query: 387 gtacaagct 395
           | |||||||
Sbjct: 378 gcacaagct 386



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score =  262 bits (132), Expect = 1e-66
 Identities = 150/156 (96%)
 Strand = Plus / Plus

                                                                            
Query: 90       gatgaacaccgacatcaccgcgtcagtgaagccggagtacccggtggtggatcggaaccc 149
                |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 20866455 gatgaacaccgacatcaccgcgtcggtgaagccggagtacccggtggtggaccggaaccc 20866514

                                                                            
Query: 150      ggccttcaccaaggtcgtcggcaacttctccgcgctcgactacatgcgcctctccaccat 209
                | |||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||
Sbjct: 20866515 gcccttcaccaaggtcgtcggcaatttctccgcgctcgactacctccgcctctccaccat 20866574

                                                    
Query: 210      ctccgccgtctccgtcaccgtcggctacctctccgg 245
                ||||||||||||||||||||||||||||||||||||
Sbjct: 20866575 ctccgccgtctccgtcaccgtcggctacctctccgg 20866610



 Score =  226 bits (114), Expect = 8e-56
 Identities = 147/158 (93%)
 Strand = Plus / Plus

                                                                            
Query: 244      gggatcaagccggggatccgcgggccgtcaatggtgacggggggcctcattggggtcctg 303
                |||||||||||||||||||||||||| || ||||||||||| || ||||| |||||| ||
Sbjct: 20866684 gggatcaagccggggatccgcgggccatcgatggtgacgggagggctcatcggggtcatg 20866743

                                                                            
Query: 304      ggagggttcatgtacgcctaccagaactccgccggacgcctgatgggattcttccccaac 363
                ||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 20866744 ggagggttcatgtacgcctaccagaactccgccggccgcctcatgggcttcttccccaac 20866803

                                                      
Query: 364      gaatccgaggtcgcgcgctacaagtacaagctgtagtg 401
                || ||||||||||| |||||||||||||||||||||||
Sbjct: 20866804 gactccgaggtcgcccgctacaagtacaagctgtagtg 20866841



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>dbj|AP003868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1111_B08
          Length = 131184

 Score =  262 bits (132), Expect = 1e-66
 Identities = 150/156 (96%)
 Strand = Plus / Plus

                                                                         
Query: 90    gatgaacaccgacatcaccgcgtcagtgaagccggagtacccggtggtggatcggaaccc 149
             |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 44756 gatgaacaccgacatcaccgcgtcggtgaagccggagtacccggtggtggaccggaaccc 44815

                                                                         
Query: 150   ggccttcaccaaggtcgtcggcaacttctccgcgctcgactacatgcgcctctccaccat 209
             | |||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||
Sbjct: 44816 gcccttcaccaaggtcgtcggcaatttctccgcgctcgactacctccgcctctccaccat 44875

                                                 
Query: 210   ctccgccgtctccgtcaccgtcggctacctctccgg 245
             ||||||||||||||||||||||||||||||||||||
Sbjct: 44876 ctccgccgtctccgtcaccgtcggctacctctccgg 44911



 Score =  226 bits (114), Expect = 8e-56
 Identities = 147/158 (93%)
 Strand = Plus / Plus

                                                                         
Query: 244   gggatcaagccggggatccgcgggccgtcaatggtgacggggggcctcattggggtcctg 303
             |||||||||||||||||||||||||| || ||||||||||| || ||||| |||||| ||
Sbjct: 44985 gggatcaagccggggatccgcgggccatcgatggtgacgggagggctcatcggggtcatg 45044

                                                                         
Query: 304   ggagggttcatgtacgcctaccagaactccgccggacgcctgatgggattcttccccaac 363
             ||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 45045 ggagggttcatgtacgcctaccagaactccgccggccgcctcatgggcttcttccccaac 45104

                                                   
Query: 364   gaatccgaggtcgcgcgctacaagtacaagctgtagtg 401
             || ||||||||||| |||||||||||||||||||||||
Sbjct: 45105 gactccgaggtcgcccgctacaagtacaagctgtagtg 45142



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>dbj|AP003881.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1124_B05
          Length = 109917

 Score =  262 bits (132), Expect = 1e-66
 Identities = 150/156 (96%)
 Strand = Plus / Plus

                                                                         
Query: 90    gatgaacaccgacatcaccgcgtcagtgaagccggagtacccggtggtggatcggaaccc 149
             |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 97588 gatgaacaccgacatcaccgcgtcggtgaagccggagtacccggtggtggaccggaaccc 97647

                                                                         
Query: 150   ggccttcaccaaggtcgtcggcaacttctccgcgctcgactacatgcgcctctccaccat 209
             | |||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||
Sbjct: 97648 gcccttcaccaaggtcgtcggcaatttctccgcgctcgactacctccgcctctccaccat 97707

                                                 
Query: 210   ctccgccgtctccgtcaccgtcggctacctctccgg 245
             ||||||||||||||||||||||||||||||||||||
Sbjct: 97708 ctccgccgtctccgtcaccgtcggctacctctccgg 97743



 Score =  226 bits (114), Expect = 8e-56
 Identities = 147/158 (93%)
 Strand = Plus / Plus

                                                                         
Query: 244   gggatcaagccggggatccgcgggccgtcaatggtgacggggggcctcattggggtcctg 303
             |||||||||||||||||||||||||| || ||||||||||| || ||||| |||||| ||
Sbjct: 97817 gggatcaagccggggatccgcgggccatcgatggtgacgggagggctcatcggggtcatg 97876

                                                                         
Query: 304   ggagggttcatgtacgcctaccagaactccgccggacgcctgatgggattcttccccaac 363
             ||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 97877 ggagggttcatgtacgcctaccagaactccgccggccgcctcatgggcttcttccccaac 97936

                                                   
Query: 364   gaatccgaggtcgcgcgctacaagtacaagctgtagtg 401
             || ||||||||||| |||||||||||||||||||||||
Sbjct: 97937 gactccgaggtcgcccgctacaagtacaagctgtagtg 97974



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>dbj|AK058993.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-F11, full
           insert sequence
          Length = 413

 Score =  182 bits (92), Expect = 1e-42
 Identities = 119/128 (92%)
 Strand = Plus / Plus

                                                                       
Query: 274 atggtgacggggggcctcattggggtcctgggagggttcatgtacgcctaccagaactcc 333
           ||||||||||| || ||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 4   atggtgacgggagggctcatcggggtcatgggagggttcatgtacgcctaccagaactcc 63

                                                                       
Query: 334 gccggacgcctgatgggattcttccccaacgaatccgaggtcgcgcgctacaagtacaag 393
           ||||| ||||| ||||| |||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 64  gccggccgcctcatgggcttcttccccaacgactccgaggtcgcccgctacaagtacaag 123

                   
Query: 394 ctgtagtg 401
           ||||||||
Sbjct: 124 ctgtagtg 131



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>dbj|AP006668.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT16B20, TM0367,
              complete sequence
          Length = 112717

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                          
Query: 118    aagccggagtacccggtggtggatcggaacccggccttcaccaaggtcgtcggcaacttc 177
              ||||| |||||||| ||  | ||||| |||||  |||||||||| |||||||||||||||
Sbjct: 102946 aagccagagtaccccgtcattgatcgcaaccctcccttcaccaacgtcgtcggcaacttc 102887

                                                                          
Query: 178    tccgcgctcgactacatgcgcctctccaccatctccgccgtctccgtcaccgtcggctac 237
                | | ||||||||  | ||| ||  ||||||| ||| ||| ||||||||||||||||||
Sbjct: 102886 aacaccctcgactatctccgcttcgtcaccatcaccggcgtttccgtcaccgtcggctac 102827

                      
Query: 238    ctctccgg 245
              ||||||||
Sbjct: 102826 ctctccgg 102819



 Score = 48.1 bits (24), Expect = 0.042
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                      
Query: 310    ttcatgtacgcctaccagaactccgccggacgcctgatgggattcttccccaacga 365
              ||||||||||| ||||||||||| || ||  | || ||||| ||||||||||||||
Sbjct: 102662 ttcatgtacgcttaccagaactcagctggtagactcatgggtttcttccccaacga 102607



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>gb|AC189632.1| Brassica rapa subsp. pekinensis clone KBrS003O10, complete sequence
          Length = 118656

 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 111/135 (82%)
 Strand = Plus / Plus

                                                                          
Query: 244    gggatcaagccggggatccgcgggccgtcaatggtgacggggggcctcattggggtcctg 303
              ||||||||||| ||||||   || ||||| ||||||||||| || || || ||  || ||
Sbjct: 109674 gggatcaagccagggatcaagggaccgtcgatggtgacgggaggactgatcggactcatg 109733

                                                                          
Query: 304    ggagggttcatgtacgcctaccagaactccgccggacgcctgatgggattcttccccaac 363
              ||||||||||||||||| |||||||||||||| ||  | || ||||| || ||||| |||
Sbjct: 109734 ggagggttcatgtacgcttaccagaactccgcggggaggctcatgggctttttccctaac 109793

                             
Query: 364    gaatccgaggtcgcg 378
              |||  ||||||||||
Sbjct: 109794 gaaggcgaggtcgcg 109808



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 122/150 (81%)
 Strand = Plus / Plus

                                                                          
Query: 90     gatgaacaccgacatcaccgcgtcagtgaagccggagtacccggtggtggatcggaaccc 149
              ||||||||| ||||||||||| |  | ||||||  ||||||| || || |||||||||||
Sbjct: 109430 gatgaacactgacatcaccgccttggagaagccccagtaccccgtcgtcgatcggaaccc 109489

                                                                          
Query: 150    ggccttcaccaaggtcgtcggcaacttctccgcgctcgactacatgcgcctctccaccat 209
                | ||||| || |||||||| ||||||  ||  ||||| ||| | ||  ||||||||||
Sbjct: 109490 tccattcacgaaagtcgtcggaaacttcagcgtcctcgattacctccgtttctccaccat 109549

                                            
Query: 210    ctccgccgtctccgtcaccgtcggctacct 239
              | ||| ||| ||||||||||||||||||||
Sbjct: 109550 caccggcgtttccgtcaccgtcggctacct 109579



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>dbj|AK227352.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL14-03-D09
          Length = 542

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 98/121 (80%)
 Strand = Plus / Plus

                                                                       
Query: 218 tctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggccgtcaatgg 277
           ||||||||||||||||||| ||||| ||||| ||||| |||||    || ||||| ||||
Sbjct: 175 tctccgtcaccgtcggctatctctctgggattaagcctgggattaagggaccgtcgatgg 234

                                                                       
Query: 278 tgacggggggcctcattggggtcctgggagggttcatgtacgcctaccagaactccgccg 337
           | || || ||  | || ||| || ||||||| |||||||| || ||||||||||| ||||
Sbjct: 235 ttactggaggattgatcgggctcatgggaggtttcatgtatgcgtaccagaactctgccg 294

            
Query: 338 g 338
           |
Sbjct: 295 g 295



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>ref|NM_117743.2| Arabidopsis thaliana unknown protein (AT4G16450) mRNA, complete cds
          Length = 548

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 98/121 (80%)
 Strand = Plus / Plus

                                                                       
Query: 218 tctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggccgtcaatgg 277
           ||||||||||||||||||| ||||| ||||| ||||| |||||    || ||||| ||||
Sbjct: 178 tctccgtcaccgtcggctatctctctgggattaagcctgggattaagggaccgtcgatgg 237

                                                                       
Query: 278 tgacggggggcctcattggggtcctgggagggttcatgtacgcctaccagaactccgccg 337
           | || || ||  | || ||| || ||||||| |||||||| || ||||||||||| ||||
Sbjct: 238 ttactggaggattgatcgggctcatgggaggtttcatgtatgcgtaccagaactctgccg 297

            
Query: 338 g 338
           |
Sbjct: 298 g 298



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>gb|AY085607.1| Arabidopsis thaliana clone 16090 mRNA, complete sequence
          Length = 545

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 98/121 (80%)
 Strand = Plus / Plus

                                                                       
Query: 218 tctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggccgtcaatgg 277
           ||||||||||||||||||| ||||| ||||| ||||| |||||    || ||||| ||||
Sbjct: 178 tctccgtcaccgtcggctatctctctgggattaagcctgggattaagggaccgtcgatgg 237

                                                                       
Query: 278 tgacggggggcctcattggggtcctgggagggttcatgtacgcctaccagaactccgccg 337
           | || || ||  | || ||| || ||||||| |||||||| || ||||||||||| ||||
Sbjct: 238 ttactggaggattgatcgggctcatgggaggtttcatgtatgcgtaccagaactctgccg 297

            
Query: 338 g 338
           |
Sbjct: 298 g 298



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>gb|BT004558.1| Arabidopsis thaliana At4g16450 gene, complete cds
          Length = 321

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 98/121 (80%)
 Strand = Plus / Plus

                                                                       
Query: 218 tctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggccgtcaatgg 277
           ||||||||||||||||||| ||||| ||||| ||||| |||||    || ||||| ||||
Sbjct: 128 tctccgtcaccgtcggctatctctctgggattaagcctgggattaagggaccgtcgatgg 187

                                                                       
Query: 278 tgacggggggcctcattggggtcctgggagggttcatgtacgcctaccagaactccgccg 337
           | || || ||  | || ||| || ||||||| |||||||| || ||||||||||| ||||
Sbjct: 188 ttactggaggattgatcgggctcatgggaggtttcatgtatgcgtaccagaactctgccg 247

            
Query: 338 g 338
           |
Sbjct: 248 g 248



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>emb|BX826421.1|CNS0A4GX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB25ZB07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 518

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 98/121 (80%)
 Strand = Plus / Plus

                                                                       
Query: 218 tctccgtcaccgtcggctacctctccgggatcaagccggggatccgcgggccgtcaatgg 277
           ||||||||||||||||||| ||||| ||||| ||||| |||||    || ||||| ||||
Sbjct: 159 tctccgtcaccgtcggctatctctctgggattaagcctgggattaagggaccgtcgatgg 218

                                                                       
Query: 278 tgacggggggcctcattggggtcctgggagggttcatgtacgcctaccagaactccgccg 337
           | || || ||  | || ||| || ||||||| |||||||| || ||||||||||| ||||
Sbjct: 219 ttactggaggattgatcgggctcatgggaggtttcatgtatgcgtaccagaactctgccg 278

            
Query: 338 g 338
           |
Sbjct: 279 g 279



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>ref|NM_180142.1| Arabidopsis thaliana unknown protein (AT2G47390) mRNA, complete cds
          Length = 3604

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 208 atctccgccgtctccgtcaccg 229
           ||||||||||||||||||||||
Sbjct: 169 atctccgccgtctccgtcaccg 190



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>gb|AY099560.1| Arabidopsis thaliana unknown protein (At2g47390) mRNA, partial cds
          Length = 1875

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 208 atctccgccgtctccgtcaccg 229
           ||||||||||||||||||||||
Sbjct: 135 atctccgccgtctccgtcaccg 156



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>gb|AC002337.3| Arabidopsis thaliana chromosome 2 clone T8I13 map CIC06C03, complete
             sequence
          Length = 88068

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 208   atctccgccgtctccgtcaccg 229
             ||||||||||||||||||||||
Sbjct: 80473 atctccgccgtctccgtcaccg 80452



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>gb|AY064997.1| Arabidopsis thaliana At2g47390/T8I13.23 mRNA, complete cds
          Length = 3171

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 208 atctccgccgtctccgtcaccg 229
           ||||||||||||||||||||||
Sbjct: 169 atctccgccgtctccgtcaccg 190



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>gb|AC004129.2| Homo sapiens BAC clone CTB-136N17 from 7, complete sequence
          Length = 162701

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 447   gcatctttccttttatctttct 468
             ||||||||||||||||||||||
Sbjct: 59617 gcatctttccttttatctttct 59638



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>gb|BT002650.1| Arabidopsis thaliana At2g47390/T8I13.23 gene, complete cds
          Length = 2883

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 208 atctccgccgtctccgtcaccg 229
           ||||||||||||||||||||||
Sbjct: 57  atctccgccgtctccgtcaccg 78



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>emb|BX819726.1|CNS0AA1Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS20ZB02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 3005

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 208 atctccgccgtctccgtcaccg 229
           ||||||||||||||||||||||
Sbjct: 64  atctccgccgtctccgtcaccg 85



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>gb|AC188848.2| Phakopsora pachyrhizi clone JGIAFNA-1121C5, complete sequence
          Length = 39300

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 457   ttttatctttctctatctaat 477
             |||||||||||||||||||||
Sbjct: 18015 ttttatctttctctatctaat 17995



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>emb|Z97341.2|ATFCA6 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 6
          Length = 213788

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 218   tctccgtcaccgtcggctacctctc 242
             ||||||||||||||||||| |||||
Sbjct: 44760 tctccgtcaccgtcggctatctctc 44784



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 302   tgggagggttcatgtacgcctaccagaactccgccgg 338
             ||||||| |||||||| || ||||||||||| |||||
Sbjct: 44933 tgggaggtttcatgtatgcgtaccagaactctgccgg 44969



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>emb|AL161544.2|ATCHRIV44 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 44
          Length = 198735

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 218   tctccgtcaccgtcggctacctctc 242
             ||||||||||||||||||| |||||
Sbjct: 22688 tctccgtcaccgtcggctatctctc 22712



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 302   tgggagggttcatgtacgcctaccagaactccgccgg 338
             ||||||| |||||||| || ||||||||||| |||||
Sbjct: 22861 tgggaggtttcatgtatgcgtaccagaactctgccgg 22897



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>gb|AC169792.2| Rhesus Macaque  BAC CH250-117K11 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 186393

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 454    tccttttatctttctctatct 474
              |||||||||||||||||||||
Sbjct: 133431 tccttttatctttctctatct 133451


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 102,682,731
Number of extensions: 5639925
Number of successful extensions: 110814
Number of sequences better than 10.0: 28
Number of HSP's gapped: 110810
Number of HSP's successfully gapped: 40
Length of query: 689
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 667
Effective length of database: 18,508,616,841
Effective search space: 12345247432947
Effective search space used: 12345247432947
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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