>LOC_Os06g05880:12006.t00474:unspliced-genomic profilin-2, putative, expressed|
Length = 2840
Score = 101 bits (215), Expect(5) = 4e-72
Identities = 37/48 (77%), Positives = 41/48 (85%)
Frame = +1 / +2
Query: 136 RMSWQTYVDDHLCCEIDGQHLTSAAILGHDGSVWAQSPNFPQFKPEEI 279
+MSWQ YVDDHL CEIDG HLT+AAI+GHDGSVWAQSPNFPQ P +
Sbjct: 110 KMSWQAYVDDHLMCEIDGNHLTAAAIVGHDGSVWAQSPNFPQVIPSPL 253
Score = 100 bits (213), Expect(5) = 4e-72
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +1 / +1
Query: 259 QFKPEEIAGIIKDFDEPGHLAPTGLFLGGTKYMVIQGEPGVVIR 390
Q+KPEEI GI+KDFDEPG LAPTGLFLGGTKYMVIQGEPGVVIR
Sbjct: 1390 QYKPEEITGIMKDFDEPGSLAPTGLFLGGTKYMVIQGEPGVVIR 1521
Score = 75.3 bits (158), Expect(5) = 4e-72
Identities = 27/32 (84%), Positives = 32/32 (100%)
Frame = +1 / +3
Query: 433 MALILGIYDEPMTPGQCNLVVERLGDYLVEQG 528
++LILGIYDEPMTPGQCN++VERLGDYL+EQG
Sbjct: 2445 LSLILGIYDEPMTPGQCNMIVERLGDYLIEQG 2540
Score = 54.7 bits (113), Expect(5) = 4e-72
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = +3 / +3
Query: 708 CLASCRIKLSCSFAE*CTFAWSW 776
CLASCRIKLSC F E CTF WSW
Sbjct: 2709 CLASCRIKLSCPFTEFCTFTWSW 2777
Score = 27.6 bits (54), Expect(5) = 4e-72
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / +3
Query: 550 LLFWSSGTKFAP 585
+LFWS GTKF P
Sbjct: 2556 MLFWSFGTKFTP 2591
Score = 107 bits (229), Expect(6) = 2e-70
Identities = 43/52 (82%), Positives = 44/52 (84%)
Frame = -1 / -1
Query: 398 FFPRMTTPGSPWMTMYFVPPRKRPVGARCPGSSKSLMMPAISSGLNWGKLGD 243
FFPRMTTPGSPW+TMYFVPPRKRPVGAR PGSSKS MMP ISSGL K D
Sbjct: 1529 FFPRMTTPGSPWITMYFVPPRKRPVGARLPGSSKSFMMPVISSGLYCNKAPD 1374
Score = 82.2 bits (173), Expect(6) = 2e-70
Identities = 35/45 (77%), Positives = 37/45 (82%)
Frame = -1 / -2
Query: 533 *KPCSTR*SPSLSTTKLHWPGVMGSS*IPRIRAMPVFLIVMPPVP 399
*+PCS R*SPSLST LHWPGV+GSS*IPRI PVFL MPPVP
Sbjct: 2545 *QPCSIR*SPSLSTIMLHWPGVIGSS*IPRINDRPVFLTHMPPVP 2411
Score = 82.2 bits (173), Expect(6) = 2e-70
Identities = 33/44 (75%), Positives = 34/44 (77%)
Frame = -1 / -3
Query: 269 GLNWGKLGDWAQTLPSWPRMAAEVRCWPSISQHRWSSTYVCHDI 138
G+ GKLGD AQTLPSWP MAA VR PSIS RWSSTY CHDI
Sbjct: 243 GITCGKLGDCAQTLPSWPTMAAAVRWLPSISHIRWSSTYACHDI 112
Score = 50.6 bits (104), Expect(6) = 2e-70
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = -1 / -1
Query: 782 KLP*PGKCTLLSERAAEFDTTRCQT 708
++P*PGKCT LSE AEFDTTRCQT
Sbjct: 2783 QVP*PGKCTELSEWTAEFDTTRCQT 2709
Score = 26.3 bits (51), Expect(6) = 2e-70
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2 / -1
Query: 673 STRHQPTNPKLDYSLHI 623
STR P+L+YSLHI
Sbjct: 2687 STRSPTNKPELNYSLHI 2637
Score = 24.0 bits (46), Expect(6) = 2e-70
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1 / -2
Query: 584 GANLVPDDQNN 552
G NLVP+DQN+
Sbjct: 2590 GVNLVPNDQNS 2558
Score = 98.2 bits (208), Expect(3) = 5e-39
Identities = 39/47 (82%), Positives = 39/47 (82%)
Frame = +3 / +3
Query: 261 VQA*GDCWHH*GL*RTRTSCTNWSFPWRHKIHGHPR*TWGCHPRKEG 401
VQA*GD WHH GL* TR S TNWSFPW HKIHG PR*T GCHPRKEG
Sbjct: 1392 VQA*GDYWHHEGL**TRQSRTNWSFPWGHKIHGDPR*TRGCHPRKEG 1532
Score = 57.4 bits (119), Expect(3) = 5e-39
Identities = 28/47 (59%), Positives = 28/47 (59%)
Frame = +3 / +2
Query: 399 GHRWHYYQEDGHGPDSWYLR*AHDSWPVQFGRGEAWRLPGRAGFLSP 539
GH H QED DSW L *A D PVQ GEAWRL RAG LSP
Sbjct: 2411 GHWRHMCQEDWPVVDSWNL**ADDPRPVQHDCGEAWRLSDRAGLLSP 2551
Score = 51.9 bits (107), Expect(3) = 5e-39
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +1 / +1
Query: 709 VWHRVVSNSAALSLSNVHLPGHG 777
VWHRVVSNSA SLS+VHLPGHG
Sbjct: 2710 VWHRVVSNSAVHSLSSVHLPGHG 2778
Score = 86.3 bits (182), Expect(3) = 1e-36
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = -3 / -3
Query: 399 LLSSDDNPRFTLDDHVFCASKEKTSWCKMSGFVKVLNDASN 277
LLSSDDNP FTLD HVFCA KEKTSWC+ +GF+KVL+DASN
Sbjct: 1530 LLSSDDNPWFTLDHHVFCAPKEKTSWCETAGFIKVLHDASN 1408
Score = 67.5 bits (141), Expect(3) = 1e-36
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = -3 / -1
Query: 534 LETLLDQVVAKPLHDQIALARSHGLIVDTKNQGHARLLDSNATGAL 397
L TLLDQ++AKPLH+ +ALA H LI+D+KNQ A LLD+ A+ AL
Sbjct: 2546 LATLLDQIIAKPLHNHVALAWGHRLIIDSKNQRQASLLDTYASSAL 2409
Score = 45.5 bits (93), Expect(3) = 1e-36
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2 / -2
Query: 778 YHDQANVHYSAKEQLSLIRHDAKH 707
YHDQ NV S QLSLIRHDAKH
Sbjct: 2779 YHDQVNVQNSVNGQLSLIRHDAKH 2708
Score = 65.2 bits (136), Expect(3) = 1e-25
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = -2 / -2
Query: 400 PSFLG*QPQVHLG*PCILCLQGKDQLVQDVRV 305
PSFLG*QP VHLG PCILC QGKDQLV+D RV
Sbjct: 1531 PSFLG*QPLVHLGSPCILCPQGKDQLVRDCRV 1436
Score = 57.9 bits (120), Expect(3) = 1e-25
Identities = 27/47 (57%), Positives = 31/47 (65%)
Frame = -2 / -3
Query: 538 GLRNPARPGSRQASPRPNCTGQESWAHRRYQESGPCPSS***CHRCP 398
GL NPAR +RQASP+ CTG S AH R+QES SS* C +CP
Sbjct: 2550 GLSNPARSDNRQASPQSCCTGLGSSAHHRFQESTTGQSS*HICLQCP 2410
Score = 39.1 bits (79), Expect(3) = 1e-25
Identities = 19/26 (73%), Positives = 19/26 (73%)
Frame = -3 / -3
Query: 786 PQVTMTRQMYITQRKSS*V*YDTMPN 709
P TMTR MY TQ S*V*YDTMPN
Sbjct: 2787 PTGTMTR*MYRTQ*MDS*V*YDTMPN 2710
Score = 61.1 bits (127), Expect(3) = 2e-21
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +2 / +2
Query: 305 NPDILHQLVFSLEAQNTWSSKVNLGLSSEERR 400
NP + HQLVFSL AQNTW SKVN GLSSEERR
Sbjct: 1436 NPAVSHQLVFSLGAQNTW*SKVNQGLSSEERR 1531
Score = 43.7 bits (89), Expect(3) = 2e-21
Identities = 27/49 (55%), Positives = 31/49 (63%)
Frame = +2 / +1
Query: 398 RAPVALLSRRRAWP*FLVSTMSP*LLASAIWSWRGLATTWSSRVSKPTL 544
RA A +SRR A *FL S MS * ASA WRGLA SSRV+K ++
Sbjct: 2410 RALEAYVSRRLACR*FLESMMSR*PQASAT*LWRGLAII*SSRVAKSSI 2556
Score = 42.8 bits (87), Expect(3) = 2e-21
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +2 / +2
Query: 701 FLMFGIVSYQTQLLFR*VMYICLVMV 778
+ MFGIVSYQTQL *V+YI LVMV
Sbjct: 2702 WFMFGIVSYQTQLSIH*VLYIYLVMV 2779
>LOC_Os10g17660:12010.t01323:unspliced-genomic profilin A, putative, expressed|
Length = 1111
Score = 92.3 bits (195), Expect(3) = 6e-55
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = +1 / +1
Query: 259 QFKPEEIAGIIKDFDEPGHLAPTGLFLGGTKYMVIQGEPGVVIR 390
QFKPEE+ I+KDFDEPG LAPTGLFLG TKYMVIQGEPG VIR
Sbjct: 340 QFKPEEMTNIMKDFDEPGFLAPTGLFLGPTKYMVIQGEPGAVIR 471
Score = 90.9 bits (192), Expect(3) = 6e-55
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = +1 / +3
Query: 136 RMSWQTYVDDHLCCEIDGQHLTSAAILGHDGSVWAQSPNFPQ 261
+MSWQTYVD+HL CEI+G HLTSAAI+GHDG+VWAQS FPQ
Sbjct: 114 KMSWQTYVDEHLMCEIEGHHLTSAAIVGHDGTVWAQSAAFPQ 239
Score = 75.3 bits (158), Expect(3) = 6e-55
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1 / +2
Query: 436 ALILGIYDEPMTPGQCNLVVERLGDYLVEQGF* 534
AL++GIYDEPMTPGQCN+VVERLGDYLVEQG *
Sbjct: 641 ALVVGIYDEPMTPGQCNMVVERLGDYLVEQGL* 739
Score = 88.1 bits (186), Expect(3) = 2e-48
Identities = 36/46 (78%), Positives = 36/46 (78%)
Frame = -1 / -3
Query: 398 FFPRMTTPGSPWMTMYFVPPRKRPVGARCPGSSKSLMMPAISSGLN 261
F PRMT PGSPWMTMY V PR PVGAR PGSSKS MM ISSGLN
Sbjct: 479 FLPRMTAPGSPWMTMYLVGPRNSPVGARNPGSSKSFMMLVISSGLN 342
Score = 75.8 bits (159), Expect(3) = 2e-48
Identities = 32/44 (72%), Positives = 35/44 (79%)
Frame = -1 / -2
Query: 530 KPCSTR*SPSLSTTKLHWPGVMGSS*IPRIRAMPVFLIVMPPVP 399
+PCSTR*SPSLSTT LH PGV+GSS*+P A PVF VMPP P
Sbjct: 735 RPCSTR*SPSLSTTMLHCPGVIGSS*MPTTSACPVFFTVMPPDP 604
Score = 73.0 bits (153), Expect(3) = 2e-48
Identities = 30/40 (75%), Positives = 31/40 (77%)
Frame = -1 / -1
Query: 257 GKLGDWAQTLPSWPRMAAEVRCWPSISQHRWSSTYVCHDI 138
GK AQT+PSWP MAAEVR WPSIS R SSTYVCHDI
Sbjct: 235 GKAALCAQTVPSWPTMAAEVRWWPSISHIRCSSTYVCHDI 116
Score = 55.1 bits (114), Expect(2) = 5e-12
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +3 / +3
Query: 261 VQA*GDCWHH*GL*RTRTSCTNWSFPWRHKIHGHPR*TWGCHPRKEG 401
VQ GD HH GL R + + W +++HGHPR*TW CH +EG
Sbjct: 342 VQTGGDDQHHEGLRRAGVPRPDRTVSWTNQVHGHPR*TWRCHSWQEG 482
Score = 38.6 bits (78), Expect(2) = 5e-12
Identities = 21/43 (48%), Positives = 24/43 (55%)
Frame = +3 / +1
Query: 399 GHRWHYYQEDGHGPDSWYLR*AHDSWPVQFGRGEAWRLPGRAG 527
G R H+ +ED G +LR A D VQ G EA RLP RAG
Sbjct: 604 GIRRHHGEEDRAGAGGRHLRRADDPRAVQHGGREARRLPRRAG 732
Score = 38.6 bits (78), Expect(2) = 1e-07
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = -3 / -2
Query: 399 LLSSDDNPRFTLDDHVFCASKEKTSWCKMSGFVKVLNDASN 277
LL+++D+ RFTLDDHV SK+++ + V+VL+D +
Sbjct: 480 LLATNDSARFTLDDHVLGWSKKQSGRGEEPRLVEVLHDVGH 358
Score = 37.3 bits (75), Expect(2) = 1e-07
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3 / -1
Query: 534 LETLLDQVVAKPLHDQIALARSHGLIVDTKNQGHARLLDSNATGAL 397
L+ LL +VVA+PL +AL H L+VD +Q LL +A+ +L
Sbjct: 739 LQALLYEVVAEPLDHHVALPWGHRLVVDADHQRLPGLLHRDAS*SL 602
Score = 35.0 bits (70), Expect(2) = 8e-04
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = -2 / -3
Query: 526 PARPGSRQASPRPNCTGQESWAHRRYQESGPCPSS***CHRCPS 395
PA GSR+AS P CT S A RR + P SS *C P+
Sbjct: 731 PALRGSRRASRPPCCTALGSSARRRCRPPAPARSSSP*CLLIPA 600
Score = 27.6 bits (54), Expect(2) = 8e-04
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2 / -1
Query: 400 PSFLG*QPQVHLG*PCILCLQ 338
PS *Q QVHLG*PC +Q
Sbjct: 481 PSCHE*QRQVHLG*PCTWLVQ 419
Score = 32.2 bits (64), Expect(2) = 0.75
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2 / +2
Query: 338 LEAQNTWSSKVNLGLSSEERRAPVALLS 421
L+ +TWSSKVNL LS RR L+S
Sbjct: 419 LDQPSTWSSKVNLALSFVARRYASYLIS 502
Score = 23.1 bits (44), Expect(2) = 0.75
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +2 / +3
Query: 452 STMSP*LLASAIWSWRGLATTWSSRVSK 535
ST S * SA W RG ATT SR +
Sbjct: 657 STTSR*PQGSATWWSRGSATTS*SRACR 740
>LOC_Os10g17680:12010.t01325:unspliced-genomic profilin A, putative, expressed|
Length = 1116
Score = 92.3 bits (195), Expect(3) = 6e-55
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = +1 / +1
Query: 259 QFKPEEIAGIIKDFDEPGHLAPTGLFLGGTKYMVIQGEPGVVIR 390
QFKPEE+ I+KDFDEPG LAPTGLFLG TKYMVIQGEPG VIR
Sbjct: 328 QFKPEEMTNIMKDFDEPGFLAPTGLFLGPTKYMVIQGEPGAVIR 459
Score = 90.9 bits (192), Expect(3) = 6e-55
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = +1 / +3
Query: 136 RMSWQTYVDDHLCCEIDGQHLTSAAILGHDGSVWAQSPNFPQ 261
+MSWQTYVD+HL CEI+G HLTSAAI+GHDG+VWAQS FPQ
Sbjct: 102 KMSWQTYVDEHLMCEIEGHHLTSAAIVGHDGTVWAQSAAFPQ 227
Score = 75.3 bits (158), Expect(3) = 6e-55
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1 / +2
Query: 436 ALILGIYDEPMTPGQCNLVVERLGDYLVEQGF* 534
AL++GIYDEPMTPGQCN+VVERLGDYLVEQG *
Sbjct: 638 ALVVGIYDEPMTPGQCNMVVERLGDYLVEQGL* 736
Score = 88.1 bits (186), Expect(3) = 5e-49
Identities = 36/46 (78%), Positives = 36/46 (78%)
Frame = -1 / -2
Query: 398 FFPRMTTPGSPWMTMYFVPPRKRPVGARCPGSSKSLMMPAISSGLN 261
F PRMT PGSPWMTMY V PR PVGAR PGSSKS MM ISSGLN
Sbjct: 467 FLPRMTAPGSPWMTMYLVGPRNSPVGARNPGSSKSFMMLVISSGLN 330
Score = 77.6 bits (163), Expect(3) = 5e-49
Identities = 33/44 (75%), Positives = 35/44 (79%)
Frame = -1 / -1
Query: 530 KPCSTR*SPSLSTTKLHWPGVMGSS*IPRIRAMPVFLIVMPPVP 399
+PCSTR*SPSLSTT LH PGVMGSS*+P A PVF VMPP P
Sbjct: 732 RPCSTR*SPSLSTTMLHCPGVMGSS*MPTTSACPVFFTVMPPDP 601
Score = 73.0 bits (153), Expect(3) = 5e-49
Identities = 30/40 (75%), Positives = 31/40 (77%)
Frame = -1 / -3
Query: 257 GKLGDWAQTLPSWPRMAAEVRCWPSISQHRWSSTYVCHDI 138
GK AQT+PSWP MAAEVR WPSIS R SSTYVCHDI
Sbjct: 223 GKAALCAQTVPSWPTMAAEVRWWPSISHIRCSSTYVCHDI 104
Score = 55.1 bits (114), Expect(2) = 5e-12
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +3 / +3
Query: 261 VQA*GDCWHH*GL*RTRTSCTNWSFPWRHKIHGHPR*TWGCHPRKEG 401
VQ GD HH GL R + + W +++HGHPR*TW CH +EG
Sbjct: 330 VQTGGDDQHHEGLRRAGVPRPDRTVSWTNQVHGHPR*TWRCHSWQEG 470
Score = 38.6 bits (78), Expect(2) = 5e-12
Identities = 21/43 (48%), Positives = 24/43 (55%)
Frame = +3 / +1
Query: 399 GHRWHYYQEDGHGPDSWYLR*AHDSWPVQFGRGEAWRLPGRAG 527
G R H+ +ED G +LR AHD VQ G EA LP RAG
Sbjct: 601 GIRRHHSEEDRAGAGGRHLRRAHDPGAVQHGG*EAR*LPRRAG 729
Score = 44.6 bits (91), Expect(2) = 6e-09
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = -3 / -3
Query: 540 VGLETLLDQVVAKPLHDQIALARSHGLIVDTKNQGHARLLDSNATGAL 397
+ L+ LL +VV +PL+ +AL R HGL+VD +Q LL +A+ +L
Sbjct: 742 IDLQALLYEVVTEPLNHHVALPRGHGLVVDADHQRLPGLLHCDAS*SL 599
Score = 38.6 bits (78), Expect(2) = 6e-09
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = -3 / -1
Query: 399 LLSSDDNPRFTLDDHVFCASKEKTSWCKMSGFVKVLNDASN 277
LL+++D+ RFTLDDHV SK+++ + V+VL+D +
Sbjct: 468 LLATNDSARFTLDDHVLGWSKKQSGRGEEPRLVEVLHDVGH 346
Score = 40.0 bits (81), Expect(2) = 2e-04
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = -2 / -2
Query: 526 PARPGSRQASPRPNCTGQESWAHRRYQESGPCPSS***CHRCPS 395
PA GS +AS P CT SWA RR + P SS *C P+
Sbjct: 728 PALRGSHRASQPPCCTAPGSWARRRCRPPAPARSSSL*CLLIPA 597
Score = 27.6 bits (54), Expect(2) = 2e-04
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2 / -3
Query: 400 PSFLG*QPQVHLG*PCILCLQ 338
PS *Q QVHLG*PC +Q
Sbjct: 469 PSCHE*QRQVHLG*PCTWLVQ 407
Score = 31.3 bits (62), Expect(2) = 0.23
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2 / +2
Query: 338 LEAQNTWSSKVNLGLSSEERRAPVALLS 421
L+ +TWSSKVNL LS RR L+S
Sbjct: 407 LDQPSTWSSKVNLALSFVARRYLSYLIS 490
Score = 25.8 bits (50), Expect(2) = 0.23
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +2 / +3
Query: 452 STMSP*LLASAIWSWRGLATTWSSRVSK 535
ST SP* SA W RG TT SR +
Sbjct: 654 STTSP*PRGSATWWLRGSVTTS*SRACR 737
>LOC_Os01g63960:12001.t05764:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 4350
Score = 32.7 bits (65), Expect(2) = 1.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1 / -2
Query: 434 MPVFLIVMPPVPFFPRMTTPGSPWMTMYFVPPRKR 330
+P F +++PP+P PR+ P W + V PR R
Sbjct: 767 LPRFALLLPPLPPRPRLFPPRPRWPPLPPVVPRPR 663
Score = 24.0 bits (46), Expect(2) = 1.0
Identities = 8/26 (30%), Positives = 12/26 (46%)
Frame = -1 / -3
Query: 227 PSWPRMAAEVRCWPSISQHRWSSTYV 150
P+ R + R WP +H W+ V
Sbjct: 331 PACSRRQLQCRRWPPAPEHLWTGCSV 254
>LOC_Os04g37650:12004.t03335:unspliced-genomic fucosyltransferase 7, putative, expressed|
Length = 2350
Score = 30.4 bits (60), Expect(2) = 1.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1 / -1
Query: 7 QPAVKARHIQVQAKHPQPRPR 69
QPA + RH+ V+ H PRP+
Sbjct: 1927 QPARRVRHLLVEGAHEHPRPQ 1865
Score = 25.4 bits (49), Expect(2) = 1.1
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -1
Query: 650 VCRLVTCRRKKMIYYVFFLMFGIVSY 727
VC L ++KK+IY + VSY
Sbjct: 442 VCTLGASKKKKLIYETIYFFVCSVSY 365
>LOC_Os05g03650:12005.t00262:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 6341
Score = 32.7 bits (65), Expect(2) = 1.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3 / -2
Query: 303 RTRTSCTNWSFPWRHKIHGHPR*TWGCHPRK 395
RT ++ + +P R ++ G R W CHPR+
Sbjct: 1075 RTSSASLSGRWPSRPRVRGSGREPWSCHPRR 983
Score = 24.0 bits (46), Expect(2) = 1.4
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3 / -3
Query: 6 PASRQSQAHPGPSKASPAETACAP 77
P R ++ PGPS PA+ P
Sbjct: 5775 PRRRAARPPPGPSPGPPAQKPSPP 5704
>LOC_Os12g08170:12012.t00699:unspliced-genomic dihydrolipoyllysine-residue acetyltransferase component of|
pyruvatedehydrogenase complex, mitochondrial precursor,
putative, expressed
Length = 4931
Score = 27.6 bits (54), Expect(2) = 2.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -1 / +2
Query: 338 RKRPVGARCPGSSKSLMMPAISSGLNWGKLGDW 240
R+R R + + MPA+SS + GK+ W
Sbjct: 221 RRRRACFRVEAKIREIFMPALSSTMTEGKIVSW 319
Score = 22.6 bits (43), Expect(2) = 2.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1 / +2
Query: 392 PRMTTPGSPWMTMYFVPPRKRPVGA 318
PR TTP SP PPR + A
Sbjct: 47 PRRTTPPSPSPPRPTPPPRDLAMAA 121
>LOC_Os02g36030:12002.t03240:unspliced-genomic cytochrome P450 76C2, putative, expressed|
Length = 1716
Score = 29.9 bits (59), Expect(2) = 3.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1 / +1
Query: 7 QPAVKARHIQVQAKHPQPRPRALHAAE 87
QPA R A+ P+PRPR H A+
Sbjct: 181 QPAQPPRRPPPPAREPRPRPRPRHGAQ 261
Score = 23.5 bits (45), Expect(2) = 3.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2 / +2
Query: 476 ASAIWSWRGLATTWSSRVSKPTLICCYF 559
A+ ++S RGLA S R SK I YF
Sbjct: 449 ATHLFSPRGLAAVRSVRESKVRDIVAYF 532
>LOC_Os06g39170:12006.t03615:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 3236
Score = 25.8 bits (50), Expect(3) = 7.6
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = -1 / -3
Query: 377 PGSPWMTMYFVPPRKRPVGARCP 309
P PW PPR+ P R P
Sbjct: 2001 PPPPWPPPSVAPPRRAPTPRRAP 1933
Score = 23.1 bits (44), Expect(3) = 7.6
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3 / -3
Query: 612 RQADRCKAHRSKLSPRRPK 556
R RC++HR PRR +
Sbjct: 3213 RPRRRCRSHRRHRPPRRSR 3157
Score = 23.1 bits (44), Expect(3) = 7.6
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1 / -1
Query: 323 GARCPGSSKSLMMPAISSGLN 261
GAR P S + P SG+N
Sbjct: 149 GARHPSPSSTTSRPVADSGMN 87
>LOC_Os12g30340:12012.t02741:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
Length = 7354
Score = 26.3 bits (51), Expect(2) = 7.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3 / -2
Query: 798 QQQNPQVTMTRQMYITQR 745
Q NPQ+ +T Q+YIT +
Sbjct: 354 QTPNPQIEVTSQIYITNQ 301
Score = 22.1 bits (42), Expect(2) = 7.7
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -3 / -1
Query: 840 FFFFFVKMQSSSIKQQQNPQVT 775
FFFF V + NPQ T
Sbjct: 403 FFFFIVSQIKCDTYPKSNPQST 338
>LOC_Os04g50110:12004.t04524:unspliced-genomic plastid-specific 30S ribosomal protein 2, chloroplast precursor,|
putative, expressed
Length = 3110
Score = 25.8 bits (50), Expect(2) = 8.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3 / -2
Query: 840 FFFFFVKMQSSSIKQQQNPQVTMTRQ 763
FF +M+ S+IKQ Q+ VTM Q
Sbjct: 2329 FFLAC*EMELSTIKQVQSSSVTMKHQ 2252
Score = 22.6 bits (43), Expect(2) = 8.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2 / -2
Query: 667 RHQPTNPKLDYSLH 626
+HQP KLDY H
Sbjct: 2260 KHQP*GAKLDYISH 2219
>LOC_Os02g54190:12002.t04998:unspliced-genomic pectinesterase-2 precursor, putative, expressed|
Length = 2327
Score = 26.3 bits (51), Expect(2) = 8.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2 / +3
Query: 2 HPSQPSKPGTSRSKQSIPSR 61
HP PS GTS + PSR
Sbjct: 726 HPGSPSTTGTSSHPRRAPSR 785
Score = 26.3 bits (51), Expect(2) = 8.6
Identities = 16/55 (29%), Positives = 20/55 (36%)
Frame = +3 / +1
Query: 378 GCHPRKEGHRWHYYQEDGHGPDSWYLR*AHDSWPVQFGRGEAWRLPGRAGFLSPP 542
G P E R + G + W +R + GR A R G G L PP
Sbjct: 871 GAPPHGERRRRRRTEPKGDLREGWEVRGEREHHEQAEGRDAARRRQGEDGHLRPP 1035
>LOC_Os05g35010:12005.t03094:unspliced-genomic cytochrome P450 71C4, putative, expressed|
Length = 1934
Score = 25.4 bits (49), Expect(2) = 8.6
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3 / +2
Query: 474 RSHGLIVDTKNQGHARLLDSNATGALLSSDDNP 376
R+ GL+ + +GHAR ALL +P
Sbjct: 425 RARGLVAGRRRRGHARARPRVRDAALLPHGGDP 523
Score = 23.1 bits (44), Expect(2) = 8.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / +2
Query: 517 PGSRQASPRP 488
PG R ASPRP
Sbjct: 332 PGGRAASPRP 361
>LOC_Os02g44654:12002.t05516:unspliced-genomic cytochrome P450 86A2, putative, expressed|
Length = 2197
Score = 31.3 bits (62), Expect = 9.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1 / -1
Query: 392 PRMTTPGSPWMTMYFVPPRKRPVGA 318
PR TPG+ M +++VPP +R + A
Sbjct: 367 PRRATPGTAKMHVWYVPPARRRLAA 293
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 328,210,415
Number of extensions: 5579524
Number of successful extensions: 30358
Number of sequences better than 10.0: 58
Length of query: 281
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 232
Effective length of database: 52,856,264
Effective search space: 12262653248
Effective search space used: 12262653248
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)