ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf97k05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK072777:Os02g0591700 | 348 | 2e-96 | 2 | AK067896:Os04g0473400 | 344 | 4e-95 | 3 | AK066340:Os10g0564300 | 34 | 0.16 | 4 | AK121593:Os02g0284600 | 31 | 1.3 | 5 | Os10g0492800:Os10g0492800 | 29 | 3.8 | 6 | AK108130:Os01g0641000 | 29 | 5.0 | 7 | Os12g0290300:Os12g0290300 | 28 | 6.5 | 8 | U57640:Os01g0124400 | 28 | 6.5 | 9 | AK100349:Os02g0772500 | 28 | 6.5 | 10 | Os11g0599500:Os11g0599500 | 28 | 8.5 | 11 | AK119653:Os02g0115900 | 28 | 8.5 | 12 | AK065743:Os02g0115900 | 28 | 8.5 | 13 | AF006825:Os02g0115900 | 28 | 8.5 |
|---|
>AK072777:Os02g0591700 | Length = 219 Score = 348 bits (894), Expect = 2e-96 Identities = 175/219 (79%), Positives = 190/219 (86%) Frame = +1 Query: 64 MAPTSKMALGIKRTSRSRTYHRRGLWAIKAKHGGXXXXXXXXXXXXXXXXYPADDVKPRT 243 MAPTSK++ GIKR SRS TYHRRGLWAIKAK+GG YPADDVKPR Sbjct: 1 MAPTSKLSQGIKRASRSHTYHRRGLWAIKAKNGGTFPKAGKPAAAAEPKFYPADDVKPRA 60 Query: 244 FSTRKPHPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPIRRV 423 STRK +PTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPIRRV Sbjct: 61 PSTRKANPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPIRRV 120 Query: 424 NQAYVISTSTRLDISKVNMQKFDDKYFAREKKTRAKKSEGELFESEKEATKNLPNFKKDD 603 NQAYVI+TST++DIS V + KFDDKYFAR+KK +AKK+EGELFE+EKEATKNLP+FKKDD Sbjct: 121 NQAYVIATSTKVDISGVKVDKFDDKYFARDKKAKAKKTEGELFETEKEATKNLPDFKKDD 180 Query: 604 QKVIDTELIKAIDAVPDLKSYLGARFSLRDGDKPHEMTF 720 QK +D ELIKAI+ VPDLKSYLGARFSLRDGDKPHEMTF Sbjct: 181 QKAVDAELIKAIEVVPDLKSYLGARFSLRDGDKPHEMTF 219
>AK067896:Os04g0473400 | Length = 239 Score = 344 bits (883), Expect = 4e-95 Identities = 172/223 (77%), Positives = 193/223 (86%), Gaps = 3/223 (1%) Frame = +1 Query: 61 PMAPTSKMALGIKRTSRSRTYHRRGLWAIKAKHGGXXXXXXXXXXXXXXXX---YPADDV 231 PMAPTSK++ GIK+ SRS TYHRRGLWAIKAKHGG YPADDV Sbjct: 17 PMAPTSKLSQGIKKASRSHTYHRRGLWAIKAKHGGAFPKAEKPAAAAAAAAPKFYPADDV 76 Query: 232 KPRTFSTRKPHPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVP 411 KPR STRKP+PTKLRS+ITPGTVLILLAGR+MGKRVVFLKQLKSGLLL+TGPFKINGVP Sbjct: 77 KPRQPSTRKPNPTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSGLLLVTGPFKINGVP 136 Query: 412 IRRVNQAYVISTSTRLDISKVNMQKFDDKYFAREKKTRAKKSEGELFESEKEATKNLPNF 591 IRRVNQ YVI+TST++DIS VN++KFDDKYF+R+KK +AKK+EGELFE+EKEATKNLP F Sbjct: 137 IRRVNQPYVIATSTKVDISGVNVEKFDDKYFSRDKKQKAKKTEGELFETEKEATKNLPEF 196 Query: 592 KKDDQKVIDTELIKAIDAVPDLKSYLGARFSLRDGDKPHEMTF 720 KK+DQKV+D ELIKAI+AVPDLK+YLGARFSLRDGDKPHEM F Sbjct: 197 KKEDQKVVDAELIKAIEAVPDLKTYLGARFSLRDGDKPHEMVF 239
>AK066340:Os10g0564300 | Length = 136 Score = 33.9 bits (76), Expect = 0.16 Identities = 32/129 (24%), Positives = 49/129 (37%), Gaps = 25/129 (19%) Frame = +1 Query: 286 ITPGTVLILLAGRYMGKRVVFLKQLKSGL-------LLITGPFKINGVPIRR-------- 420 + PG +ILL GR+ G++ V ++ + G L+ G K IR+ Sbjct: 5 LKPGKAVILLQGRFAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAKKTAK 64 Query: 421 ----------VNQAYVISTSTRLDISKVNMQKFDDKYFAREKKTRAKKSEGELFESEKEA 570 VN +++ T LD+ + D R+KK A KS E + Sbjct: 65 KSRVKCFLKLVNFTHLMPTRYTLDVDLKEVAAGPDALATRDKKVAACKSAKARLEDRFKT 124 Query: 571 TKNLPNFKK 597 KN F K Sbjct: 125 GKNRWFFTK 133
>AK121593:Os02g0284600 | Length = 137 Score = 30.8 bits (68), Expect = 1.3 Identities = 33/130 (25%), Positives = 49/130 (37%), Gaps = 26/130 (20%) Frame = +1 Query: 286 ITPGTVLILLAGRYMGKRVVFLKQLKSGL-------LLITGPFKINGVPIRR-------- 420 + PG +ILL GRY G++ V ++ + G L+ G K IR+ Sbjct: 5 LKPGKAVILLQGRYAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAKKTAK 64 Query: 421 ----------VNQAYVISTSTRLDIS-KVNMQKFDDKYFAREKKTRAKKSEGELFESEKE 567 VN +++ T LD+ K D R+KK A K+ E + Sbjct: 65 KSRVKCFLKLVNFTHIMPTRYTLDVDFKDVASGGPDALATRDKKVAACKAAKARLEERFK 124 Query: 568 ATKNLPNFKK 597 KN F K Sbjct: 125 TGKNRWFFTK 134
>Os10g0492800:Os10g0492800 | Length = 362 Score = 29.3 bits (64), Expect = 3.8 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = +3 Query: 3 PTAASPSLAEVPLRFRRRITNGPDVEDGARHKADVEVAHLPPPR 134 PT ASP+ A+ R RRR+ G G H+ A P PR Sbjct: 20 PTPASPAHAQHRRRRRRRMCGGGRGRGGGAHQVRCCAAAAPQPR 63
>AK108130:Os01g0641000 | Length = 388 Score = 28.9 bits (63), Expect = 5.0 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 6/53 (11%) Frame = +3 Query: 276 QVDHHAGHGADPAR------GEVHGEARRVPQAAQVRPAPHHWTFQDQWRANP 416 Q++ H G A+ A G GE+ R+ + APHH ++ W +P Sbjct: 29 QLERHLGRPAERAASQHGGSGSRRGESARLGLGEEPPQAPHHQRRREDWEIDP 81
>Os12g0290300:Os12g0290300 | Length = 279 Score = 28.5 bits (62), Expect = 6.5 Identities = 16/44 (36%), Positives = 19/44 (43%) Frame = +3 Query: 9 AASPSLAEVPLRFRRRITNGPDVEDGARHKADVEVAHLPPPRAL 140 AA+PSL PL + + P AR V AH P P L Sbjct: 8 AAAPSLVAPPLHHKPHLAFPPHHPSPARGSIGVRCAHSPSPHPL 51
>U57640:Os01g0124400 | Length = 182 Score = 28.5 bits (62), Expect = 6.5 Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 3/78 (3%) Frame = +3 Query: 249 HTQAPSHQAQVDHHAGHGADPARGEVHGEARRVPQAAQVRPAPHHWTFQDQ---WRANPQ 419 H + P H + HH H P R + +A +V +DQ WR N + Sbjct: 16 HRRRPRHGGRRHHHQHH-TPPDRRRISTAGADEEEAVEVLRQHRAAADEDQPAAWRCNDE 74 Query: 420 SEPGLCHFHIHKARHLQG 473 EP C R G Sbjct: 75 LEPSQCTAACKSCREAPG 92
>AK100349:Os02g0772500 | Length = 1164 Score = 28.5 bits (62), Expect = 6.5 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = -1 Query: 396 LERSSDEEQAGLELLEEHDALPH--VPPREQDQHRARRDGR 280 L SSDEE+A ++D LP+ PP ++ R RR R Sbjct: 86 LSASSDEEEAPRPAPAKYDLLPYSPSPPASDEERRDRRKDR 126
>Os11g0599500:Os11g0599500 | Length = 623 Score = 28.1 bits (61), Expect = 8.5 Identities = 14/25 (56%), Positives = 14/25 (56%) Frame = -1 Query: 141 PKPAAVVGARPRRPLYAERHLRRRG 67 P PAA ARP R Y HLR RG Sbjct: 21 PAPAANGPARPDRSSYVPPHLRNRG 45
>AK119653:Os02g0115900 | Length = 665 Score = 28.1 bits (61), Expect = 8.5 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 16/92 (17%) Frame = +1 Query: 424 NQAYVISTSTRLDISKVNMQKFDDKYFAREKK----------------TRAKKSEGELFE 555 NQA V T D+ ++ +KF+DK R+ K + K E ++F Sbjct: 86 NQAAVNPERTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNKDGKPYIQVKIKDGENKVFS 145 Query: 556 SEKEATKNLPNFKKDDQKVIDTELIKAIDAVP 651 E+ + L K+ + + ++ A+ VP Sbjct: 146 PEEVSAMILGKMKETAEAYLGKKINDAVVTVP 177
>AK065743:Os02g0115900 | Length = 665 Score = 28.1 bits (61), Expect = 8.5 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 16/92 (17%) Frame = +1 Query: 424 NQAYVISTSTRLDISKVNMQKFDDKYFAREKK----------------TRAKKSEGELFE 555 NQA V T D+ ++ +KF+DK R+ K + K E ++F Sbjct: 86 NQAAVNPERTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNKDGKPYIQVKIKDGENKVFS 145 Query: 556 SEKEATKNLPNFKKDDQKVIDTELIKAIDAVP 651 E+ + L K+ + + ++ A+ VP Sbjct: 146 PEEVSAMILGKMKETAEAYLGKKINDAVVTVP 177
>AF006825:Os02g0115900 | Length = 665 Score = 28.1 bits (61), Expect = 8.5 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 16/92 (17%) Frame = +1 Query: 424 NQAYVISTSTRLDISKVNMQKFDDKYFAREKK----------------TRAKKSEGELFE 555 NQA V T D+ ++ +KF+DK R+ K + K E ++F Sbjct: 86 NQAAVNPERTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNKDGKPYIQVKIKDGENKVFS 145 Query: 556 SEKEATKNLPNFKKDDQKVIDTELIKAIDAVP 651 E+ + L K+ + + ++ A+ VP Sbjct: 146 PEEVSAMILGKMKETAEAYLGKKINDAVVTVP 177 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 22,251,018 Number of extensions: 478327 Number of successful extensions: 1868 Number of sequences better than 10.0: 13 Number of HSP's gapped: 1863 Number of HSP's successfully gapped: 13 Length of query: 294 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 194 Effective length of database: 11,395,755 Effective search space: 2210776470 Effective search space used: 2210776470 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
