ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf95h13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | D21130:Os08g0130500 | 483 | e-136 | 2 | AK064857:Os08g0130500 | 483 | e-136 | 3 | Os11g0135400:Os11g0135400 | 481 | e-136 | 4 | AK111208: | 207 | 2e-53 | 5 | AK062008:Os08g0130500 | 116 | 4e-26 | 6 | AK067673:Os11g0105400 | 47 | 2e-05 | 7 | Os12g0105200:Os12g0105200 | 40 | 0.004 | 8 | AK121843:Os01g0899000 | 35 | 0.087 | 9 | Os04g0326000:Os04g0326000 | 32 | 0.74 | 10 | AK066375:Os08g0300300 | 31 | 1.6 | 11 | AK098844:Os07g0160600 | 29 | 6.3 | 12 | AK065047:Os07g0160600 | 29 | 6.3 | 13 | U82833:Os01g0323600 | 29 | 8.2 | 14 | AK107842:Os08g0138900 | 29 | 8.2 | 15 | AK106114:Os03g0788600 | 29 | 8.2 | 16 | AK071516:Os01g0323600 | 29 | 8.2 | 17 | AK069046:Os03g0788600 | 29 | 8.2 |
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>D21130:Os08g0130500 | Length = 319 Score = 483 bits (1242), Expect = e-136 Identities = 253/319 (79%), Positives = 267/319 (83%) Frame = +1 Query: 139 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNT 318 MAIKRTKAEKK+AYD+KLCQLL+EYTKVLIAVADNVGS QLQEIRKGLRGDSIVLMGKNT Sbjct: 1 MAIKRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNT 60 Query: 319 LIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARXXXXX 498 LIRRCIKVH++ TGNK+FLEL LLVGNVGLIFTKGDLKEVREEVAKYKVGAPAR Sbjct: 61 LIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVA 120 Query: 499 XXXXXXXXGNTGLDPSQTSFFQVLNIPTKINKGTVEITIPVELIKKGDKVGSSESALLAK 678 GNTGLDPSQTSFFQVLNIPTKINKGTVEI PVELIKKGDKVGSSESALLAK Sbjct: 121 PVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAK 180 Query: 679 LGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAA 858 LGIRPFSYGLVI NVYDSGSVFSPEVLDLTE+DLM+KFASGVSMVAS+SLAISYPT+AAA Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISYPTIAAA 240 Query: 859 PHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXX 1038 PHMFLN YKNVLAVA+ET+YSY HADKIKEYLKDPSKFAV Sbjct: 241 PHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKFAVAAPVAADSGAAAPSAAKEEE 300 Query: 1039 XXXXXXXXXDGEMGFSLFD 1095 DG++G SLFD Sbjct: 301 KKEEPEEESDGDLGMSLFD 319
>AK064857:Os08g0130500 | Length = 319 Score = 483 bits (1242), Expect = e-136 Identities = 253/319 (79%), Positives = 267/319 (83%) Frame = +1 Query: 139 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNT 318 MAIKRTKAEKK+AYD+KLCQLL+EYTKVLIAVADNVGS QLQEIRKGLRGDSIVLMGKNT Sbjct: 1 MAIKRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNT 60 Query: 319 LIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARXXXXX 498 LIRRCIKVH++ TGNK+FLEL LLVGNVGLIFTKGDLKEVREEVAKYKVGAPAR Sbjct: 61 LIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVA 120 Query: 499 XXXXXXXXGNTGLDPSQTSFFQVLNIPTKINKGTVEITIPVELIKKGDKVGSSESALLAK 678 GNTGLDPSQTSFFQVLNIPTKINKGTVEI PVELIKKGDKVGSSESALLAK Sbjct: 121 PVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAK 180 Query: 679 LGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAA 858 LGIRPFSYGLVI NVYDSGSVFSPEVLDLTE+DLM+KFASGVSMVAS+SLAISYPT+AAA Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISYPTIAAA 240 Query: 859 PHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXX 1038 PHMFLN YKNVLAVA+ET+YSY HADKIKEYLKDPSKFAV Sbjct: 241 PHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKFAVAAPVAADSGAAAPSAAKEEE 300 Query: 1039 XXXXXXXXXDGEMGFSLFD 1095 DG++G SLFD Sbjct: 301 KKEEPEEESDGDLGMSLFD 319
>Os11g0135400:Os11g0135400 | Length = 320 Score = 481 bits (1237), Expect = e-136 Identities = 255/320 (79%), Positives = 267/320 (83%), Gaps = 1/320 (0%) Frame = +1 Query: 139 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNT 318 MAIKRTKAEKK+AYD+KLCQLL+EYTKVLIAVADNVGS QLQEIRKGLRGDSIVLMGKNT Sbjct: 1 MAIKRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNT 60 Query: 319 LIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARXXXXX 498 LIRRCIKVH++ TGNKDFLEL LLVGNVGLIFTKGDLKEVREEVAKYKVGAPAR Sbjct: 61 LIRRCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVA 120 Query: 499 XXXXXXXXGNTGLDPSQTSFFQVLNIPTKINKGTVEITIPVELIKKGDKVGSSESALLAK 678 GNTGLDPSQTSFFQVLNIPTKINKGTVEI PVELIKKGDKVGSSESALLAK Sbjct: 121 PVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAK 180 Query: 679 LGIRPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAA 858 LGIRPFSYGLVI NVYDSGSVFSPEVLDLTEEDLM+KFASGVSMVAS+SLAISYPT+AAA Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEVLDLTEEDLMEKFASGVSMVASVSLAISYPTIAAA 240 Query: 859 PHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAV-XXXXXXXXXXXXXXXXXXX 1035 PHMFLN YKNVLAVA+ET+YSY HADKIKEYLKDPSKFAV Sbjct: 241 PHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKFAVAAAVAAADSGAAAPAASKEE 300 Query: 1036 XXXXXXXXXXDGEMGFSLFD 1095 DG++G SLFD Sbjct: 301 EKKEEPEEESDGDLGMSLFD 320
>AK111208: | Length = 254 Score = 207 bits (526), Expect = 2e-53 Identities = 109/218 (50%), Positives = 144/218 (66%), Gaps = 1/218 (0%) Frame = +1 Query: 328 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARXXXXXXXX 507 R I +H EK N L L L+ NVGL+FT DL +VR+ + KV APAR Sbjct: 2 RSINLHKEK--NPKLLALIPLIKNNVGLVFTNEDLTKVRDVIVSNKVAAPARQGAISPID 59 Query: 508 XXXXXGNTGLDPSQTSFFQVLNIPTKINKGTVEITIPVELIKKGDKVGSSESALLAKLGI 687 NTGL+P++TSFFQ LNIPTKI KGTVEI LIKKGDKVG+SE+ LL L I Sbjct: 60 VIVPANNTGLEPTKTSFFQALNIPTKITKGTVEIIADYHLIKKGDKVGNSEATLLQMLNI 119 Query: 688 RPFSYGLVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHM 867 +PF YGL + VYD G+++ P VLD+ ++ L +KF V+ VAS+SLA+ PT A+ PH Sbjct: 120 KPFFYGLTVNKVYDDGNLYEPSVLDINDQVLSEKFYKAVNNVASISLALGIPTEASLPHT 179 Query: 868 FLNAYKNVLAV-ALETDYSYDHADKIKEYLKDPSKFAV 978 +N +K++LA+ A E + ++ A+++K YLKDPSKFAV Sbjct: 180 LINGFKSLLALAAAEENITFKEAEEVKAYLKDPSKFAV 217
>AK062008:Os08g0130500 | Length = 99 Score = 116 bits (290), Expect = 4e-26 Identities = 61/99 (61%), Positives = 67/99 (67%) Frame = +1 Query: 799 GVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLKDPSKFAV 978 GVSMVAS+SLAISYPT+AAAPHMFLN YKNVLAVA+ET+YSY HADKIKEYLKDPSKFAV Sbjct: 1 GVSMVASVSLAISYPTIAAAPHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKFAV 60 Query: 979 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGEMGFSLFD 1095 DG++G SLFD Sbjct: 61 AAPVAADSGAAAPSAAKEEEKKEEPEEESDGDLGMSLFD 99
>AK067673:Os11g0105400 | Length = 233 Score = 47.4 bits (111), Expect = 2e-05 Identities = 38/198 (19%), Positives = 79/198 (39%), Gaps = 1/198 (0%) Frame = +1 Query: 124 PVAAPMAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVL 303 PV K+ E+K + +E Y + DN+ +++L+++R+ L+ S + Sbjct: 9 PVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSRIF 68 Query: 304 MGKNTLIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPAR 483 + +++ + S +LS L G+ GL FT +V +++ AR Sbjct: 69 LAGKKVMQIALGRSSADEAKTGLHKLSKFLQGDTGLFFTNLPRDDVERLFREFEEHDFAR 128 Query: 484 XXXXXXXXXXXXXGN-TGLDPSQTSFFQVLNIPTKINKGTVEITIPVELIKKGDKVGSSE 660 G F + +P ++NKG VE+ + ++G + Sbjct: 129 TGSIVTETVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGAVELVADHIVCEEGKPISPEA 188 Query: 661 SALLAKLGIRPFSYGLVI 714 + L LG++ ++ L + Sbjct: 189 AQTLRLLGMQMATFRLYL 206
>Os12g0105200:Os12g0105200 | Length = 383 Score = 40.0 bits (92), Expect = 0.004 Identities = 36/182 (19%), Positives = 75/182 (41%), Gaps = 7/182 (3%) Frame = +1 Query: 142 AIKRTKAEKKIAYDQK------LCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVL 303 A+ +K +KK ++K + +E Y + DN+ +++L+++R+ L+ S + Sbjct: 145 AVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSRIF 204 Query: 304 MGKNTLIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPAR 483 + +++ + +LS L G+ GL FT +V +++ AR Sbjct: 205 LAGKKVMQIALGRSPADEAKTGLHKLSKFLQGDTGLFFTNLPRDDVERLFREFEEHDFAR 264 Query: 484 XXXXXXXXXXXXXGN-TGLDPSQTSFFQVLNIPTKINKGTVEITIPVELIKKGDKVGSSE 660 G F + +P ++NKG VE+ + ++G + S E Sbjct: 265 TGSIATETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGAVELVADHIVCEEGKPI-SPE 323 Query: 661 SA 666 +A Sbjct: 324 AA 325
>AK121843:Os01g0899000 | Length = 369 Score = 35.4 bits (80), Expect = 0.087 Identities = 32/97 (32%), Positives = 47/97 (48%) Frame = +1 Query: 532 GLDPSQTSFFQVLNIPTKINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGLV 711 GL S T Q N IN + + EL++K D GSS AL+ + SYG V Sbjct: 38 GLKDSATEKAQPQNSALTINIPVLSLD---ELVEKTDDFGSS--ALIGE-----GSYGRV 87 Query: 712 ICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASL 822 V DSG+ + + LD E + +F + V++V+ L Sbjct: 88 YYAVLDSGTKIAVKKLDSNENEPTSEFLTQVALVSRL 124
>Os04g0326000:Os04g0326000 | Length = 649 Score = 32.3 bits (72), Expect = 0.74 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%) Frame = +1 Query: 703 GLVICNVYDSGSVFSPEVLDLTEE-DLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNA 879 G I DSG PE++ T+E +K A S+V S + + +P A MF N Sbjct: 286 GKTIGQPADSGDELKPEIVQGTKEAPNSNKKALDGSIVGS-RIKVRWP----ADEMFYNG 340 Query: 880 YKNVLAVALET-DYSYDHADKIKEYLKD 960 + ET + YDH D +++ LKD Sbjct: 341 LVKSFDASSETHEIVYDHGDVVRQSLKD 368
>AK066375:Os08g0300300 | Length = 538 Score = 31.2 bits (69), Expect = 1.6 Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = +3 Query: 204 RGVHQGAHRRRRQCRLQA-APGDPQGSPR*LHRAHGQEHPDPPLHQG 341 R VH AHRRRR R A +G P HRAH +H P + G Sbjct: 261 RAVHAAAHRRRRGGRAAAELQRRREGGP---HRAHAPDHGAPRVPGG 304
>AK098844:Os07g0160600 | Length = 479 Score = 29.3 bits (64), Expect = 6.3 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = +3 Query: 186 EALPVARGVHQGAHRRRRQCRLQAAPGDPQGSPR*LHRAHGQEHPDPPLHQGA 344 E L V R V + +RRR + A P G+P R H + P PP+ GA Sbjct: 186 ERLLVPRSVQEDFNRRRSLAAISAVL--PTGAPEVDPRTHRLKKPAPPVPPGA 236
>AK065047:Os07g0160600 | Length = 479 Score = 29.3 bits (64), Expect = 6.3 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = +3 Query: 186 EALPVARGVHQGAHRRRRQCRLQAAPGDPQGSPR*LHRAHGQEHPDPPLHQGA 344 E L V R V + +RRR + A P G+P R H + P PP+ GA Sbjct: 186 ERLLVPRSVQEDFNRRRSLAAISAVL--PTGAPEVDPRTHRLKKPAPPVPPGA 236
>U82833:Os01g0323600 | Length = 212 Score = 28.9 bits (63), Expect = 8.2 Identities = 23/49 (46%), Positives = 25/49 (51%), Gaps = 6/49 (12%) Frame = +3 Query: 219 GAHRRRRQCRLQAAPGDPQGSP-R*LHRAHG-QEH----PDPPLHQGAL 347 G RRRR R G QG P R LHR G QEH P PPLH+ + Sbjct: 88 GRARRRRLLR----QGPDQGRPERRLHRQAGRQEHRRQRPRPPLHRAGV 132
>AK107842:Os08g0138900 | Length = 123 Score = 28.9 bits (63), Expect = 8.2 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = +3 Query: 183 PEALPVARGVHQGAHRRRRQCRLQAAPGDPQGSP 284 P ALP A GA RRR+ R ++ G PQ P Sbjct: 21 PAALPAATAGDGGAAARRRRRRARSLGGSPQWRP 54
>AK106114:Os03g0788600 | Length = 474 Score = 28.9 bits (63), Expect = 8.2 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = +3 Query: 186 EALPVARGVHQGAHRRRRQCRLQAAPGDPQGSPR*LHRAHGQEHPDPPLHQGA 344 E L V R V + +RRR + A P G+P R H + P PP+ GA Sbjct: 188 ERLLVPRSVQEDFNRRRSLADISAVL--PTGAPEVDPRTHRLKKPAPPVPPGA 238
>AK071516:Os01g0323600 | Length = 212 Score = 28.9 bits (63), Expect = 8.2 Identities = 23/49 (46%), Positives = 25/49 (51%), Gaps = 6/49 (12%) Frame = +3 Query: 219 GAHRRRRQCRLQAAPGDPQGSP-R*LHRAHG-QEH----PDPPLHQGAL 347 G RRRR R G QG P R LHR G QEH P PPLH+ + Sbjct: 88 GRARRRRLLR----QGPDQGRPERRLHRQAGRQEHRRQRPRPPLHRAGV 132
>AK069046:Os03g0788600 | Length = 474 Score = 28.9 bits (63), Expect = 8.2 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = +3 Query: 186 EALPVARGVHQGAHRRRRQCRLQAAPGDPQGSPR*LHRAHGQEHPDPPLHQGA 344 E L V R V + +RRR + A P G+P R H + P PP+ GA Sbjct: 188 ERLLVPRSVQEDFNRRRSLADISAVL--PTGAPEVDPRTHRLKKPAPPVPPGA 238 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 31,217,666 Number of extensions: 676783 Number of successful extensions: 2174 Number of sequences better than 10.0: 17 Number of HSP's gapped: 2165 Number of HSP's successfully gapped: 17 Length of query: 425 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 322 Effective length of database: 11,275,632 Effective search space: 3630753504 Effective search space used: 3630753504 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
