Clone Name | FLbaf95g07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AK059857:Os06g0332900 | 31 | 4.3 | 2 | Os03g0170100:Os03g0170100 | 30 | 5.6 | 3 | Os12g0202900:Os12g0202900 | 30 | 7.3 | 4 | AK107178:Os05g0518200 | 30 | 7.3 | 5 | AK065766:Os05g0564300 | 30 | 9.5 |
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>AK059857:Os06g0332900 | Length = 318 Score = 30.8 bits (68), Expect = 4.3 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = -3 Query: 352 LHTRSPSEAPPPVAWLVIYPACGCLGAARRALVSSCERTPWFRE 221 +H P+ +P W+ P CG L ARR ++C + + RE Sbjct: 73 VHRNDPNLSPREGDWICQNPNCGNLNFARRTHCNNCNKYRYSRE 116
>Os03g0170100:Os03g0170100 | Length = 119 Score = 30.4 bits (67), Expect = 5.6 Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 6/57 (10%) Frame = -3 Query: 1924 LYMIDELSINIYHSKIILKIRLPKKMPADRLWHPVDGA------WVAGEHEKRSNSL 1772 ++ +D+L ++ Y +++L+ + K+ L+ VD W+AG H++ S+SL Sbjct: 47 VFSVDQLVLDTYPFRLLLETAVRKEESKAALFVDVDAILFEHILWLAGHHDRSSSSL 103
>Os12g0202900:Os12g0202900 | Length = 1294 Score = 30.0 bits (66), Expect = 7.3 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Frame = -3 Query: 946 SKTSKIRCRDIFPSALQ---YPSCKEEKEARVGVLQSPEVENNANACRL 809 S K++ FPS+LQ C +E E +VGV +SPE N ++ R+ Sbjct: 1202 SGARKLQSLPDFPSSLQKLDITCCCKELEEKVGVYESPEWNNISHIARV 1250
>AK107178:Os05g0518200 | Length = 1055 Score = 30.0 bits (66), Expect = 7.3 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Frame = +2 Query: 1637 GLEVSSNKQAKNNVSACCQLDAYLFRSIKKRSHG--MEGHPSSTIRSQGV 1780 G S++ Q N VSAC + + ++ + SHG ++ HPS TI G+ Sbjct: 449 GSNKSTDAQTPNCVSACRNMHSEGYQGLPLNSHGEFVKLHPSGTIDPNGM 498
>AK065766:Os05g0564300 | Length = 500 Score = 29.6 bits (65), Expect = 9.5 Identities = 17/46 (36%), Positives = 22/46 (47%) Frame = -3 Query: 1489 PGQHRAPSNQYFLQRRPAQHRAPSNQSFLRRPGQHRVPNNRLHHPT 1352 P H+ P N QH A N ++ P QH + NN LHHP+ Sbjct: 286 PHFHQNPLNSM-------QHPALFNHIQMQVPHQHCLSNNLLHHPS 324 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 69,525,305 Number of extensions: 1690815 Number of successful extensions: 4354 Number of sequences better than 10.0: 5 Number of HSP's gapped: 4350 Number of HSP's successfully gapped: 5 Length of query: 760 Length of database: 15,399,855 Length adjustment: 108 Effective length of query: 652 Effective length of database: 11,075,427 Effective search space: 7221178404 Effective search space used: 7221178404 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)