ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf95g07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK059857:Os06g0332900 31 4.3
2Os03g0170100:Os03g0170100 30 5.6
3Os12g0202900:Os12g0202900 30 7.3
4AK107178:Os05g0518200 30 7.3
5AK065766:Os05g0564300 30 9.5

>AK059857:Os06g0332900 |
          Length = 318
 Score = 30.8 bits (68), Expect = 4.3
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -3

Query: 352 LHTRSPSEAPPPVAWLVIYPACGCLGAARRALVSSCERTPWFRE 221
           +H   P+ +P    W+   P CG L  ARR   ++C +  + RE
Sbjct: 73  VHRNDPNLSPREGDWICQNPNCGNLNFARRTHCNNCNKYRYSRE 116



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>Os03g0170100:Os03g0170100 |
          Length = 119

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
 Frame = -3

Query: 1924 LYMIDELSINIYHSKIILKIRLPKKMPADRLWHPVDGA------WVAGEHEKRSNSL 1772
            ++ +D+L ++ Y  +++L+  + K+     L+  VD        W+AG H++ S+SL
Sbjct: 47   VFSVDQLVLDTYPFRLLLETAVRKEESKAALFVDVDAILFEHILWLAGHHDRSSSSL 103



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>Os12g0202900:Os12g0202900 |
          Length = 1294

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = -3

Query: 946  SKTSKIRCRDIFPSALQ---YPSCKEEKEARVGVLQSPEVENNANACRL 809
            S   K++    FPS+LQ      C +E E +VGV +SPE  N ++  R+
Sbjct: 1202 SGARKLQSLPDFPSSLQKLDITCCCKELEEKVGVYESPEWNNISHIARV 1250



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>AK107178:Os05g0518200 |
          Length = 1055

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +2

Query: 1637 GLEVSSNKQAKNNVSACCQLDAYLFRSIKKRSHG--MEGHPSSTIRSQGV 1780
            G   S++ Q  N VSAC  + +  ++ +   SHG  ++ HPS TI   G+
Sbjct: 449  GSNKSTDAQTPNCVSACRNMHSEGYQGLPLNSHGEFVKLHPSGTIDPNGM 498



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>AK065766:Os05g0564300 |
          Length = 500

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -3

Query: 1489 PGQHRAPSNQYFLQRRPAQHRAPSNQSFLRRPGQHRVPNNRLHHPT 1352
            P  H+ P N         QH A  N   ++ P QH + NN LHHP+
Sbjct: 286  PHFHQNPLNSM-------QHPALFNHIQMQVPHQHCLSNNLLHHPS 324


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 69,525,305
Number of extensions: 1690815
Number of successful extensions: 4354
Number of sequences better than 10.0: 5
Number of HSP's gapped: 4350
Number of HSP's successfully gapped: 5
Length of query: 760
Length of database: 15,399,855
Length adjustment: 108
Effective length of query: 652
Effective length of database: 11,075,427
Effective search space: 7221178404
Effective search space used: 7221178404
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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