Clone Information

BLAST Search Result

Clone Name	FLbaf95g07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	LOC_Os10g07460:12010.t00604:unspliced-genomic retrotransposo...	41	0.036
2	LOC_Os09g38600:12009.t03328:unspliced-genomic expressed protein	40	0.049
3	LOC_Os01g27490:12001.t02452:unspliced-genomic leucoanthocyan...	40	0.067
4	LOC_Os08g37740:12008.t03510:unspliced-genomic retrotransposo...	26	0.083
5	LOC_Os09g17970:12009.t01582:unspliced-genomic senescence-ind...	36	1.2
6	LOC_Os03g48480:12003.t04206:unspliced-genomic acyl-CoA thioe...	29	1.2
7	LOC_Os11g16450:12011.t01425:unspliced-genomic retrotransposo...	27	1.2
8	LOC_Os06g33450:12006.t03042:unspliced-genomic DNA binding pr...	35	1.6
9	LOC_Os03g60620:12003.t05301:unspliced-genomic heat shock cog...	35	1.6
10	LOC_Os09g26270:12009.t02306:unspliced-genomic hypothetical p...	29	1.7
11	LOC_Os02g03294:12002.t00229:unspliced-genomic nuc-1 negative...	26	2.3
12	LOC_Os09g02250:12009.t00125:unspliced-genomic transposon pro...	31	2.3
13	LOC_Os09g38350:12009.t03303:unspliced-genomic acyl-activatin...	33	2.6
14	LOC_Os10g36984:12010.t02973:unspliced-genomic hypothetical p...	29	2.7
15	LOC_Os03g22070:12003.t01959:unspliced-genomic hypothetical p...	30	3.0
16	LOC_Os03g01700:12003.t00064:unspliced-genomic citrate transp...	35	3.0
17	LOC_Os01g03020:12001.t00194:unspliced-genomic leucyl-tRNA sy...	28	3.7
18	LOC_Os01g15550:12001.t01406:unspliced-genomic expressed protein	28	3.8
19	LOC_Os06g44240:12006.t04112:unspliced-genomic gp165, putative	33	4.0
20	LOC_Os04g33390:12004.t03009:unspliced-genomic P-protein, put...	34	4.2
21	LOC_Os04g25680:12004.t02275:unspliced-genomic ulp1 protease ...	34	4.2
22	LOC_Os01g38390:12001.t03376:unspliced-genomic hypothetical p...	34	4.2
23	LOC_Os07g33740:12007.t03052:unspliced-genomic vrga1, putativ...	34	4.2
24	LOC_Os06g14080:12006.t01283:unspliced-genomic ATMAP70-4, put...	34	4.2
25	LOC_Os08g07610:12008.t00650:unspliced-genomic retrotransposo...	34	4.9
26	LOC_Os03g08710:12003.t00727:unspliced-genomic expressed protein	29	5.2
27	LOC_Os03g04000:12003.t00281:unspliced-genomic 4-coumarate--C...	28	5.2
28	LOC_Os11g07750:12011.t00666:unspliced-genomic hypothetical p...	29	5.5
29	LOC_Os07g14120:12007.t01276:unspliced-genomic agmatine couma...	33	5.6
30	LOC_Os11g15230:12011.t01352:unspliced-genomic expressed protein	34	5.7
31	LOC_Os09g39670:12009.t03432:unspliced-genomic retinol dehydr...	34	5.7
32	LOC_Os07g26940:12007.t02390:unspliced-genomic ORMDL family p...	34	5.7
33	LOC_Os01g45570:12001.t04012:unspliced-genomic homeobox-leuci...	34	5.7
34	LOC_Os09g39590:12009.t03424:unspliced-genomic cleavage and p...	34	5.7
35	LOC_Os07g43020:12007.t03950:unspliced-genomic expressed protein	34	5.7
36	LOC_Os07g11250:12007.t00999:unspliced-genomic hypothetical p...	28	6.4
37	LOC_Os11g47500:12011.t04246:unspliced-genomic xylanase inhib...	32	6.6
38	LOC_Os12g38610:12012.t03541:unspliced-genomic lectin-like re...	33	7.9
39	LOC_Os11g41310:12011.t03668:unspliced-genomic snRNP protein,...	33	7.9
40	LOC_Os07g25550:12007.t02252:unspliced-genomic conserved hypo...	33	7.9
41	LOC_Os03g56180:12003.t04878:unspliced-genomic legume lectins...	33	7.9
42	LOC_Os03g15390:12003.t01325:unspliced-genomic expressed protein	33	7.9
43	LOC_Os02g36264:12002.t03263:unspliced-genomic ent-kaurene sy...	33	7.9
44	LOC_Os02g01340:12002.t00034:unspliced-genomic ferredoxin--NA...	33	7.9
45	LOC_Os08g06250:12008.t00515:unspliced-genomic tetraspanin fa...	33	7.9
46	LOC_Os08g42870:12008.t04016:unspliced-genomic expressed protein	29	8.2
47	LOC_Os02g30714:12002.t02764:unspliced-genomic dehydrogenase/...	32	9.0
48	LOC_Os10g42299:12010.t03458:unspliced-genomic mitochondrial ...	26	9.2
49	LOC_Os02g36360:12002.t03273:unspliced-genomic zinc finger, C...	31	9.2
50	LOC_Os03g26570:12003.t02342:unspliced-genomic retrotransposo...	25	9.3
51	LOC_Os05g51860:12005.t04611:unspliced-genomic conserved hypo...	25	9.4

>LOC_Os10g07460:12010.t00604:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 7845
 Score = 40.9 bits (83), Expect = 0.036
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = -2 / -3

                                        
Query: 218  AADARCCRSPRSPAVIECRHSRSAATPI 135
            A D RCCRSPR    + CRHSR    P+
Sbjct: 2071 APDRRCCRSPRPRPHLHCRHSRPPPPPL 1988

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>LOC_Os09g38600:12009.t03328:unspliced-genomic expressed protein|
          Length = 2090

 Score = 40.5 bits (82), Expect = 0.049
 Identities = 23/75 (30%), Positives = 31/75 (41%)
 Frame = -3 / +3

                                                                        
Query: 1519 HQQQSFLR*RPGQHRAPSNQYFLQRRPAQHRAPSNQSFLRRPGQHRVPNNRLHHPT*MIK 1340
            H   +  R R  + R  S +   +RRP  HR P  +    R  Q R P N  HH      
Sbjct: 39   HTAPALPRRRRWRWRWRSPRLDSRRRPGLHRRPPERHHRHRHAQQRRPPNPGHHLRRAAA 218

                           
Query: 1339 SAMYYFVCKPHHPGR 1295
            + + +    PHHP R
Sbjct: 219  ARLLHLRLVPHHPPR 263



 Score = 34.5 bits (69), Expect = 3.0
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = -3 / +3

                                                         
Query: 1498 R*RPGQHRAPSNQYFLQRRPAQHRAPSNQSFLRRPGQHRVPNNRL 1364
            R RPG HR P  ++   R   Q R P+    LRR    R+ + RL
Sbjct: 108  RRRPGLHRRPPERHHRHRHAQQRRPPNPGHHLRRAAAARLLHLRL 242

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>LOC_Os01g27490:12001.t02452:unspliced-genomic leucoanthocyanidin dioxygenase, putative, expressed|
          Length = 1590

 Score = 40.0 bits (81), Expect = 0.067
 Identities = 21/50 (42%), Positives = 25/50 (50%)
 Frame = -2 / +1

                                                              
Query: 296  PRVRMPGSRTPCLGEQLRAHSMV*GAAADARCCRSPRSPAVIECRHSRSA 147
            PR R P  R P LG  LRA + V  AAA A   R  R  A +   H ++A
Sbjct: 946  PRPRQPRRRAPLLGRLLRAAA*VRAAAAGAGAARRRRRQAALRAAHIQAA 1095

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>LOC_Os08g37740:12008.t03510:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3341

 Score = 26.3 bits (51), Expect(3) = 0.083
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +2 / -2

                                  
Query: 281  ASARGVYD*PCDRGWCLTWRPR 346
            A AR    *PC   WC  WR R
Sbjct: 1249 ARARRRRT*PCRARWCRGWRRR 1184



 Score = 24.0 bits (46), Expect(3) = 0.083
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1 / -2

                       
Query: 346  CEGSSRRRPIP 378
            C+GSSR RP P
Sbjct: 1150 CQGSSRGRPAP 1118



 Score = 22.6 bits (43), Expect(3) = 0.083
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3 / -3

                                          
Query: 369  AYSLLFFLLLGQMWFSGGGHRQRVTHQRRG 458
            A+ +     +GQ+ F  G     + HQ+RG
Sbjct: 1092 AFLVQLHFTIGQLRFVDGSELADLCHQQRG 1003

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>LOC_Os09g17970:12009.t01582:unspliced-genomic senescence-induced receptor-like serine/threonine-protein kinase|
           precursor, putative
          Length = 6083

 Score = 35.9 bits (72), Expect = 1.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1 / +2

                          
Query: 96  WNEEAPKWGRWWLEC 52
           WN+    WGRWWL C
Sbjct: 254 WNDNLQMWGRWWLAC 298

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>LOC_Os03g48480:12003.t04206:unspliced-genomic acyl-CoA thioesterase/ catalytic/ hydrolase, acting on ester bonds,|
            putative, expressed
          Length = 2961

 Score = 29.5 bits (58), Expect(2) = 1.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3 / +1

                                             
Query: 1492 RPGQHRAPSNQYFLQRRPAQHRAPSNQSFLRRP 1394
            +P + RA  +Q   QRRP +HR    +   RRP
Sbjct: 553  QPRRRRAAQHQPLPQRRPRRHRPRPRRPAPRRP 651



 Score = 23.5 bits (45), Expect(2) = 1.2
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = -3 / +1

                                      
Query: 1378 PNNRLHHPT*MIKSAMYYFVCKPHHP 1301
            P N  HHP  +  +AM       H P
Sbjct: 658  PGNLTHHPQFLFSAAMLATYLPHHRP 735

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>LOC_Os11g16450:12011.t01425:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 2720

 Score = 26.7 bits (52), Expect(2) = 1.2
 Identities = 10/30 (33%), Positives = 11/30 (36%)
 Frame = -1 / +2

                                         
Query: 141 PDCVRSKTDASPASRWNEEAPKWGRWWLEC 52
           P C R     S   RW+     W RW   C
Sbjct: 401 PGCGRPPPPRSRRRRWSRTRGGWRRWRRRC 490



 Score = 26.3 bits (51), Expect(2) = 1.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -2 / +2

                                 
Query: 206 RCCRSPRSPAVIECRHSRSAAT 141
           RC R+PR  A    R SR+ AT
Sbjct: 254 RCRRAPRRAATTPARASRTTAT 319

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>LOC_Os06g33450:12006.t03042:unspliced-genomic DNA binding protein, putative, expressed|
          Length = 6100

 Score = 35.4 bits (71), Expect = 1.6
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -3 / +3

                                                  
Query: 1867 IRLPKKMPADRLWHPVDGAWVAGEHEKRSNSLRPNCGA 1754
            +RL  ++P D    P DG  VAG H +R+  +R   GA
Sbjct: 3939 VRLQLRVPGDDADPPRDGGAVAGRHRRRAVGVRQQAGA 4052

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>LOC_Os03g60620:12003.t05301:unspliced-genomic heat shock cognate 70 kDa protein 2, putative, expressed|
          Length = 4622

 Score = 35.4 bits (71), Expect = 1.6
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = -1 / -1

                                              
Query: 162  PL*ICRHPDCVRSKTDASPASRWNEEAPKWGRWW 61
            P  +  HP    S   A   SRW   AP W  WW
Sbjct: 3566 PWSVSSHPHRPESTHQAGYRSRWRRPAPSW*EWW 3465

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>LOC_Os09g26270:12009.t02306:unspliced-genomic hypothetical protein|
          Length = 2026

 Score = 28.6 bits (56), Expect(2) = 1.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1 / +1

                              
Query: 1426 LGAELGVAGENIDCWGLG 1479
            +  +LG+ GE  DCW +G
Sbjct: 1681 VAGDLGIEGEGGDCWSMG 1734



 Score = 24.0 bits (46), Expect(2) = 1.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1 / +1

                       
Query: 1360 GAGDCWGLGAD 1392
            G G CW LGA+
Sbjct: 1543 GGGGCWDLGAE 1575

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>LOC_Os02g03294:12002.t00229:unspliced-genomic nuc-1 negative regulatory protein preg, putative, expressed|
          Length = 2024

 Score = 26.3 bits (51), Expect(2) = 2.3
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +3 / -2

                                    
Query: 1383 RC*PGRRRKD*LLGARC*AGRRWR 1454
            RC PGRRR+      R  AGRR R
Sbjct: 142  RCRPGRRRRRRPAPRRARAGRRGR 71



 Score = 25.8 bits (50), Expect(2) = 2.3
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3 / -2

                     
Query: 1497 RRKDCCWCS 1523
            RR+ CCWC+
Sbjct: 46   RRRPCCWCA 20

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>LOC_Os09g02250:12009.t00125:unspliced-genomic transposon protein, putative, unclassified, expressed|
          Length = 3301

 Score = 30.9 bits (61), Expect(3) = 2.3
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2 / -2

                                                   
Query: 1721 LLTGRDRHLIDSKH*HCFSPACWKTPPSRT*LGLLPGQC 1605
            +LTG+D  ++ +KH + F    WKT    T   LL   C
Sbjct: 2982 ILTGKDNMMV*TKHTNSFQKLGWKTMAKPTASKLLHAWC 2866



 Score = 24.4 bits (47), Expect(3) = 2.3
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2 / -1

                              
Query: 1520 TPAAIFSPVTPRSAPSPQ 1467
            TPA   SP  P S PSP+
Sbjct: 2686 TPAGGSSPAPPPSRPSPR 2633



 Score = 23.5 bits (45), Expect(3) = 2.3
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -2 / -1

                                    
Query: 209  ARCCRSPRSPAVIECRHSRSAATP 138
            A CC   R  A   CR  R A +P
Sbjct: 2245 AGCCWGERCRARTSCRGGRPALSP 2174

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>LOC_Os09g38350:12009.t03303:unspliced-genomic acyl-activating enzyme 11, putative, expressed|
          Length = 2258

 Score = 33.1 bits (66), Expect(2) = 2.6
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -2 / +2

                                                     
Query: 308  VSHIPRVRMPGSRTPCLGEQLRAHSMV*GAAADARCCRSPR 186
            + H PR R+PG+  P  G   R  +   GAA   R  R PR
Sbjct: 1127 LQHPPRRRVPGAAAPPRGGAHRRRAAARGAARARRAARLPR 1249



 Score = 24.4 bits (47), Expect(2) = 2.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3 / +3

                                    
Query: 1432 HRAPSNQSFLRRPGQHRVPNNRLH 1361
            H  P ++  LRRP   RV  ++LH
Sbjct: 51   HLPPQSRLRLRRPHLRRVRRHQLH 122

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>LOC_Os10g36984:12010.t02973:unspliced-genomic hypothetical protein|
          Length = 1680

 Score = 28.6 bits (56), Expect(2) = 2.7
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = -2 / -2

                                                     
Query: 1598 CVCYPRPSLAYGDFLSSCNHSPFFS*TPAAIFSPVTPRSAP 1476
            C+    PSL      S+   SPF S +  A   P T R+AP
Sbjct: 419  CIRRRLPSLNVATTASTYRRSPFLSRSVPAYRPPATARAAP 297



 Score = 28.6 bits (56), Expect(2) = 2.7
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3 / -1

                                
Query: 322 PPVAWLVIYPACGCLGAARRA 260
           PPVA+L+  PAC C+  A  A
Sbjct: 198 PPVAFLLRRPACSCVVVAAAA 136

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>LOC_Os03g22070:12003.t01959:unspliced-genomic hypothetical protein|
          Length = 1369

 Score = 30.4 bits (60), Expect(2) = 3.0
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -3 / +1

                                                
Query: 1537 APFSHEHQQQSFLR*RPGQHRAPSNQYFLQRRPAQH 1430
            +P S +       R RP Q R+PS+ ++ + R AQH
Sbjct: 508  SPSSSQLTSHEACRRRPPQRRSPSSSHWRRNRMAQH 615



 Score = 26.3 bits (51), Expect(2) = 3.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2 / +2

                                     
Query: 209 ARCCRSPRSPAVIECRHSRSAATPIV 132
           ARC RS    + +   H R +ATP+V
Sbjct: 671 ARCPRSTAPRSELTTSHRRRSATPLV 748

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>LOC_Os03g01700:12003.t00064:unspliced-genomic citrate transporter family protein, expressed|
          Length = 2385

 Score = 34.5 bits (69), Expect = 3.0
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = +1 / -1

                                                             
Query: 1360 GAGDCWGLGADLGVAEKIDCWGLGAELGVAGENIDCWGLGADLGVTGEK 1506
            G  D  G GAD+G   + +  GLG E+ + GE  D  G     GV GE+
Sbjct: 648  GVADGGGGGADVGAGGEGEEEGLGGEVALGGELEDELGEDDAAGVVGEE 502

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>LOC_Os01g03020:12001.t00194:unspliced-genomic leucyl-tRNA synthetase, putative, expressed|
          Length = 9266

 Score = 27.6 bits (54), Expect(2) = 3.7
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1 / +3

                                           
Query: 150 CRHPDCVRSKTDASPASRWNEEAPKWGRWWLE 55
           C + D  +++  A  A  ++E  P+W R W E
Sbjct: 153 CANADAGKAQAQARRAYPYDEIEPRWQRHWEE 248



 Score = 23.5 bits (45), Expect(2) = 3.7
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -2 / +2

                                     
Query: 221 AAADARCCRSPRSPAVIECRHSRSAA 144
           AAA  RCC  P  P       + SAA
Sbjct: 53  AAAPGRCCCPPPPPPAKRVPAAESAA 130

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>LOC_Os01g15550:12001.t01406:unspliced-genomic expressed protein|
          Length = 852

 Score = 27.6 bits (54), Expect(3) = 3.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3 / -2

                                 
Query: 271 ARRALVSSCERTPWFREQLPMR 206
           +RR +V   E TPW + ++P+R
Sbjct: 74  SRRCIVVDVESTPWQKLRMPLR 9



 Score = 24.4 bits (47), Expect(3) = 3.8
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2 / -1

                                    
Query: 599 HLTNSR*NAGVELSSVPPGSHCYVV 525
           H T+   +AGV+ +SV    HC+V+
Sbjct: 807 HPTDVGGHAGVKGASVARAGHCHVI 733



 Score = 22.1 bits (42), Expect(3) = 3.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3 / -3

                     
Query: 340 SPSEAPPPVA 311
           SPS APPP++
Sbjct: 709 SPSRAPPPLS 680

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>LOC_Os06g44240:12006.t04112:unspliced-genomic gp165, putative|
          Length = 1926

 Score = 33.1 bits (66), Expect(2) = 4.0
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = +3 / -2

                                                       
Query: 1734 TAWRDTQAPQFGRRELLRFSCSPATQAPSTGCHSRSAGIFLGS 1862
            TA +    P   R   +RF C  AT  PS  C S  A +  GS
Sbjct: 1331 TARQLLSLPSSSRSSTMRFHCRLATSLPSLSCESTEARMSCGS 1203



 Score = 23.5 bits (45), Expect(2) = 4.0
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3 / -3

                                        
Query: 138  RGGGRSRVAALYDRRRPW*STTTRIGSC 221
            RGGGR+R    +  R    +  TR GSC
Sbjct: 1399 RGGGRARRRRPWGGRSCCPTRRTRRGSC 1316

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>LOC_Os04g33390:12004.t03009:unspliced-genomic P-protein, putative, expressed|
          Length = 1662

 Score = 34.1 bits (68), Expect = 4.2
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +3 / +3

                                     
Query: 1599 RPTLARQETKSCTAWRCLPTSRRKT 1673
            RP        SCTAWRC PT+ R T
Sbjct: 945  RPPSPPPAPPSCTAWRCSPTASRTT 1019

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>LOC_Os04g25680:12004.t02275:unspliced-genomic ulp1 protease family, C-terminal catalytic domain containing protein|
          Length = 7607

 Score = 34.1 bits (68), Expect = 4.2
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +3 / +1

                                             
Query: 1827 CHSRSAGIFLGSLIFRIILLWYIFILSSSIMYN 1925
            CH     IF  SLIF  ++ WYIF LS    Y+
Sbjct: 5143 CHVSVCFIF*FSLIFLFVVAWYIFSLS*QFTYS 5241

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>LOC_Os01g38390:12001.t03376:unspliced-genomic hypothetical protein|
          Length = 698

 Score = 34.1 bits (68), Expect = 4.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2 / +2

                                
Query: 398 WSDVVFRWWAPAASHSPETGI 460
           W+DV  RWW+ A S +P  G+
Sbjct: 38  WNDVGLRWWSAAGSRTPPLGL 100

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>LOC_Os07g33740:12007.t03052:unspliced-genomic vrga1, putative, expressed|
          Length = 3289

 Score = 34.1 bits (68), Expect = 4.2
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +1 / -1

                                                                  
Query: 292  RGI*LTMRQGVVPHLATACEGSSRRRPIPCSFFYSLVRCGFQVVGTGSESLTRD 453
            R + L M+ G   +LA+  E S+ RRP+ C    +   CG  V+      + R+
Sbjct: 1918 RCVNLLMKSGAFSNLASL*EKSNTRRPLRCDRILANASCGLIVLRPSKSKMVRN 1757

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>LOC_Os06g14080:12006.t01283:unspliced-genomic ATMAP70-4, putative, expressed|
          Length = 5684

 Score = 34.1 bits (68), Expect = 4.2
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +1 / +1

                                                  
Query: 2110 PCRCFCRSILLCTCKIMLMRPC*ALNLNACSRWMMYCI 2223
            P  C C S L CTCKI L   C   NL+  +  +M+ +
Sbjct: 1342 PDACICFSALSCTCKIFLNPHCRCHNLDFDAYVVMFLV 1455

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>LOC_Os08g07610:12008.t00650:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass|
          Length = 4766

 Score = 33.6 bits (67), Expect(2) = 4.9
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1 / +2

                                                      
Query: 1666 EKQCQCLLSIRCLSLPVNKKEISRHGGTPKLHNSVAGSCSVF 1791
            EK+C   L I CL L     E+ R       H  + G C++F
Sbjct: 1274 EKRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLCNMF 1399



 Score = 24.0 bits (46), Expect(2) = 4.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3 / +3

                            
Query: 1641 WRCLPTSRRKTMSVLA 1688
            WRC P S R T  V++
Sbjct: 822  WRCHPNSTRVTYDVIS 869

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>LOC_Os03g08710:12003.t00727:unspliced-genomic expressed protein|
          Length = 869

 Score = 29.5 bits (58), Expect(3) = 5.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1 / +1

                                            
Query: 1075 AESDNSRKSAESYTCEKICDYARVLVQVDAFA 1170
            A     + S E + CE++C   R+L +V AF+
Sbjct: 373  AARGREKSSDEVFVCERVCTSKRMLKKVGAFS 468



 Score = 22.6 bits (43), Expect(3) = 5.2
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2 / +3

                                      
Query: 392 TPWSDVVFRWWAPAASHSPETGIIKPQ 472
           +PW    FR WA + +  P    + PQ
Sbjct: 186 SPWPVRDFRIWAKSDNRGPSILSVFPQ 266



 Score = 21.7 bits (41), Expect(3) = 5.2
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +3 / +3

                            
Query: 3   PPSLPVIPITSSDPDPH 53
           PPS P     S  P PH
Sbjct: 54  PPSTPTSNGASGQPTPH 104

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>LOC_Os03g04000:12003.t00281:unspliced-genomic 4-coumarate--CoA ligase 1, putative, expressed|
          Length = 3902

 Score = 28.1 bits (55), Expect(2) = 5.2
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -3 / +1

                                           
Query: 1447 RRPAQHRAPSNQSFLRRPGQHRVPNNRLHHP 1355
            RRP   +        R+ G+ R P  RLHHP
Sbjct: 457  RRPHHRQPAQYPRRDRQAGRRRPPRPRLHHP 549



 Score = 22.6 bits (43), Expect(2) = 5.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2 / +3

                       
Query: 1502 SPVTPRSAPSP 1470
            SP+TP ++PSP
Sbjct: 402  SPLTPSTSPSP 434

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>LOC_Os11g07750:12011.t00666:unspliced-genomic hypothetical protein|
          Length = 393

 Score = 28.6 bits (56), Expect(2) = 5.5
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -1 / +2

                                  
Query: 132 VRSKTDASPASRWNEEAPKWGRW 64
           VRS+   SPA RW  EA   G W
Sbjct: 218 VRSQGAQSPAPRW*REARSQGAW 286



 Score = 25.4 bits (49), Expect(2) = 5.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2 / +3

                                
Query: 1649 TPPSRT*LGLLPGQCGSCVC 1590
            +PPS + LGLL G+   C C
Sbjct: 39   SPPSSSLLGLLGGRGRYCTC 98

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>LOC_Os07g14120:12007.t01276:unspliced-genomic agmatine coumaroyltransferase, putative|
          Length = 1433

 Score = 33.1 bits (66), Expect(2) = 5.6
 Identities = 18/43 (41%), Positives = 21/43 (48%)
 Frame = -3 / -3

                                                       
Query: 436  RCRCPPPENHI*PRSRKKSRE*AAVVRILHTRSPSEAPPPVAW 308
            R R PPP   I  RSR  +R     +R   +RSPS   P  AW
Sbjct: 1386 RTRAPPPSAAICRRSRATTRRLPGALRRPASRSPSCRGPRWAW 1258



 Score = 22.6 bits (43), Expect(2) = 5.6
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = -2 / -3

                               
Query: 296 PRVRMPGSRTPCLGEQLRAH 237
           PRV  P    P LG   R H
Sbjct: 924 PRVHPPPHAAPLLGHARRGH 865

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>LOC_Os11g15230:12011.t01352:unspliced-genomic expressed protein|
          Length = 1993

 Score = 33.6 bits (67), Expect = 5.7
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = -3 / +1

                                         
Query: 289  CGCLGAARRALVSSCERTPWFREQLPMRV 203
            C C   AR  LV   ER+ W RE  PM V
Sbjct: 1057 CVCGNLARHRLVEGSERSAWHRETQPMAV 1143

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>LOC_Os09g39670:12009.t03432:unspliced-genomic retinol dehydrogenase 14, putative, expressed|
          Length = 4104

 Score = 33.6 bits (67), Expect = 5.7
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -3 / +2

                                            
Query: 1486 GQHRAPSNQYFLQRRPAQHRAPSNQSFLRRPG 1391
            G HR PS++  L+RRP +HR    Q   RR G
Sbjct: 170  GLHRRPSHRRALRRRPHRHRHRRLQRHRRRDG 265

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>LOC_Os07g26940:12007.t02390:unspliced-genomic ORMDL family protein, expressed|
          Length = 2556

 Score = 33.6 bits (67), Expect = 5.7
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +3 / +3

                                       
Query: 141 GGGRSRVAALYDRRRPW*STTTRIGSCS 224
           GGGR      + RRR W  T TR GSC+
Sbjct: 138 GGGRGPTPTTWRRRRRWT*TRTRSGSCT 221

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>LOC_Os01g45570:12001.t04012:unspliced-genomic homeobox-leucine zipper protein ATHB-4, putative, expressed|
          Length = 3515

 Score = 33.6 bits (67), Expect = 5.7
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3 / +2

                                                        
Query: 1515 WCS*EKGAVITR*KEISIC*RGTWVTDARPTLARQETKSCTAWR 1646
            +C  +KG V T    ++    GTW + +R   AR+ +    AWR
Sbjct: 416  YCCLQKGPVATTTTPVAAAT*GTWTSTSRRAAARRRSSRWAAWR 547

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>LOC_Os09g39590:12009.t03424:unspliced-genomic cleavage and polyadenylation specificity factor, 100 kDa subunit,|
            putative, expressed
          Length = 7197

 Score = 33.6 bits (67), Expect = 5.7
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -1 / -1

                                                               
Query: 1626 WSLAWPVWVVRLLPTSLASIWRFPFIL*SQPLFLMNTSSNLFSGDAQVSTE 1474
            W++  PVW    L T+L     F +IL  +  F  N  S+ FSG   ++TE
Sbjct: 5604 WTIQ*PVWNQSFLKTALEGPRSFIYILHMK*HFCNNRRSSAFSGYNLITTE 5452

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>LOC_Os07g43020:12007.t03950:unspliced-genomic expressed protein|
          Length = 905

 Score = 33.6 bits (67), Expect = 5.7
 Identities = 19/60 (31%), Positives = 27/60 (45%)
 Frame = +1 / -3

                                                                        
Query: 1378 GLGADLGVAEKIDCWGLGAELGVAGENIDCWGLGADLGVTGEKIAAGVHEKKGL*LQDER 1557
            G+GAD G    +D      E       +    LG +LGV G ++   + E +GL   DER
Sbjct: 555  GVGADEGALLDVDLEERAVEAAERAALVGGGALGGELGVGGGRLGEELREAEGLGGGDER 376

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>LOC_Os07g11250:12007.t00999:unspliced-genomic hypothetical protein|
          Length = 859

 Score = 28.1 bits (55), Expect(2) = 6.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3 / -1

                               
Query: 349 HTRSPSEAPPPVAWLVIYPA 290
           H R P  +PPPVA   + PA
Sbjct: 613 HPRQPPHSPPPVAVFPLLPA 554



 Score = 26.7 bits (52), Expect(2) = 6.4
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -2 / -1

                                     
Query: 221 AAADARCCRSPRSPAVIECRHSRSAA 144
           A    RC R+PR      CRH   AA
Sbjct: 160 AVRSGRCRRAPRPRRAASCRHPCRAA 83

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>LOC_Os11g47500:12011.t04246:unspliced-genomic xylanase inhibitor protein 1 precursor, putative, expressed|
          Length = 1718

 Score = 32.2 bits (64), Expect(2) = 6.6
 Identities = 18/40 (45%), Positives = 20/40 (50%)
 Frame = +3 / -2

                                                    
Query: 1359 WCRRLLGTRC*PGRRRKD*LLGARC*AGRRWRKY*LLGAR 1478
            WCRR  G R   GRRR     G R    R WRK   +G+R
Sbjct: 658  WCRRRRGGRRRGGRRRGRSSRGFRRRRRRTWRKGGSIGSR 539



 Score = 23.5 bits (45), Expect(2) = 6.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1 / -2

                        
Query: 337  ATACEGSSRRRP 372
            A AC G+ RRRP
Sbjct: 1036 AAACRGARRRRP 1001

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>LOC_Os12g38610:12012.t03541:unspliced-genomic lectin-like receptor kinase 7, putative, expressed|
          Length = 2596

 Score = 33.1 bits (66), Expect = 7.9
 Identities = 18/66 (27%), Positives = 24/66 (36%)
 Frame = -3 / -2

                                                                        
Query: 1552 HLVITAPFSHEHQQQSFLR*RPGQHRAPSNQYFLQRRPAQHRAPSNQSFLRRPGQHRVPN 1373
            HL    P     +Q   LR RP   R P   +  ++RP +      +   R     R   
Sbjct: 1710 HLAGGVPLPRPLRQHELLRRRPRLDRPPPRHHLERQRPEREHVRRRRRLPRPRQLRRQVT 1531

                  
Query: 1372 NRLHHP 1355
             R HHP
Sbjct: 1530 QRPHHP 1513

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>LOC_Os11g41310:12011.t03668:unspliced-genomic snRNP protein, putative|
          Length = 3189

 Score = 33.1 bits (66), Expect = 7.9
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -2 / -3

                                      
Query: 224  GAAADARCCRSPRSPAVIECRHSRSA 147
            GAA  + C R P SPA   CR SR+A
Sbjct: 2869 GAAP*SPCARRPPSPAARRCRRSRAA 2792

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>LOC_Os07g25550:12007.t02252:unspliced-genomic conserved hypothetical protein|
          Length = 4441

 Score = 33.1 bits (66), Expect = 7.9
 Identities = 14/37 (37%), Positives = 25/37 (67%)
 Frame = +2 / -3

                                                 
Query: 1388 LTWASQKRLIAGGSVLSWASLEKILIAGGSVLTWASP 1498
            LTW+++ R+IAG ++LS  +  ++ +A  +  T ASP
Sbjct: 134  LTWSTRARVIAGVNLLSAVNGCRVSVAAAATATSASP 24

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>LOC_Os03g56180:12003.t04878:unspliced-genomic legume lectins beta domain containing protein, expressed|
          Length = 2035

 Score = 33.1 bits (66), Expect = 7.9
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3 / +3

                                       
Query: 1569 C*RGTWVTDARPTLARQETKSCTAWRC 1649
            C RGTW    R + A   T + T+WRC
Sbjct: 1902 CRRGTWTWPLRRSCATTMTTTTTSWRC 1982

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>LOC_Os03g15390:12003.t01325:unspliced-genomic expressed protein|
          Length = 3474

 Score = 33.1 bits (66), Expect = 7.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -3 / +1

                                      
Query: 292 ACGCLGAARRALVSSCERTPWFREQLP 212
           AC C  +AR A  S+  R PW+R  LP
Sbjct: 616 ACCCRSSARSASTSAPPRCPWWRPTLP 696

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>LOC_Os02g36264:12002.t03263:unspliced-genomic ent-kaurene synthase B, chloroplast precursor, putative, expressed|
          Length = 12921

 Score = 33.1 bits (66), Expect = 7.9
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -2 / +2

                              
Query: 206  RCCRSPRSPAVIECRHSR 153
            RCCR P  PA   CRH R
Sbjct: 9296 RCCRRPPLPAATRCRHHR 9349

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>LOC_Os02g01340:12002.t00034:unspliced-genomic ferredoxin--NADP reductase, leaf isozyme, chloroplast precursor,|
            putative, expressed
          Length = 1727

 Score = 33.1 bits (66), Expect = 7.9
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +3 / +2

                                              
Query: 123  WTAHNRGGGRSRVAALYDRRRPW*STTTRIGSCS 224
            WT+   G  R+R       RR W ST T  GSCS
Sbjct: 1151 WTSR*AGSRRTRRGRRCTSRRGWRSTRTSCGSCS 1252

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>LOC_Os08g06250:12008.t00515:unspliced-genomic tetraspanin family protein, expressed|
          Length = 3570

 Score = 33.1 bits (66), Expect = 7.9
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -1 / +1

                                                  
Query: 1125 FFTCIRFCAFATVIRFCAAMSNMFGSLGRRQGGCYISF 1012
            FF C RF      +     ++++FG  G  +GGC +SF
Sbjct: 1147 FFVCCRFIYAFIGVGVILFITSIFGCAGASRGGCCLSF 1260

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>LOC_Os08g42870:12008.t04016:unspliced-genomic expressed protein|
          Length = 6162

 Score = 29.0 bits (57), Expect(2) = 8.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2 / -3

                              
Query: 2249 FHFNSISHQIQYIIHRLH 2196
            FHFN+ ++Q+ Y IH  H
Sbjct: 6106 FHFNNRNNQLYYCIHHYH 6053



 Score = 28.1 bits (55), Expect(2) = 8.2
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = -3 / -1

                               
Query: 187  GLRRS*SAATLDLPPPRLC 131
            G RRS SAA L  PP R C
Sbjct: 5796 GTRRSSSAAALSSPPARCC 5740

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>LOC_Os02g30714:12002.t02764:unspliced-genomic dehydrogenase/reductase SDR family member 7 precursor, putative,|
            expressed
          Length = 13881

 Score = 31.8 bits (63), Expect(2) = 9.0
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -1 / +3

                                                 
Query: 186  VSGGHRVPPL*ICRHPDCVRSKTDASPASRWNEEAPK 76
            V+G  R PP  + R   C+RS   A+P S     AP+
Sbjct: 9711 VAGSRRPPPAPVRRARSCLRSAVAATPPSAARPRAPR 9821



 Score = 26.3 bits (51), Expect(2) = 9.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2 / +1

                               
Query: 371  GRRREDPSHAVAK*GTTPC 315
            GRRR   +H   + GT+PC
Sbjct: 9256 GRRRRGDAHGGGRRGTSPC 9312

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>LOC_Os10g42299:12010.t03458:unspliced-genomic mitochondrial carnitine/acylcarnitine carrier-like protein, putative,|
            expressed
          Length = 5352

 Score = 26.3 bits (51), Expect(2) = 9.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2 / +3

                          
Query: 416  RWWAPAASHSPETG 457
            RWW P AS +P +G
Sbjct: 4932 RWWWPGASPAPPSG 4973



 Score = 23.5 bits (45), Expect(2) = 9.2
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2 / +3

                          
Query: 311  CDRGWCLTWRPRVK 352
            C RGW   WR R +
Sbjct: 4806 CSRGWGRRWRGRCR 4847

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>LOC_Os02g36360:12002.t03273:unspliced-genomic zinc finger, C2H2 type family protein, expressed|
          Length = 3535

 Score = 30.9 bits (61), Expect(2) = 9.2
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -1 / +2

                               
Query: 2223 NTIHHPPTTRIKVQRLTRA 2167
            N +HHPPT R + +RL RA
Sbjct: 32   NEVHHPPTRRRRWRRLRRA 88



 Score = 25.4 bits (49), Expect(2) = 9.2
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -1 / +3

                                                   
Query: 759  CLSNYFLWHF*LCSVITEQYTIICSSLFSRRMLQTLFML 643
            CL+  FLW F*+      +Y I C  L      +   +L
Sbjct: 1563 CLAGSFLWLF*ILCE*RFKYLIFCLFLLEYGTFKVFMLL 1679

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>LOC_Os03g26570:12003.t02342:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 4223

 Score = 24.9 bits (48), Expect(2) = 9.3
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +2 / -3

                                
Query: 281  ASARGVYD*PCDRGWCLTWR 340
            A AR    *PC   WC  WR
Sbjct: 1206 ACARHHRT*PCRARWCRGWR 1147



 Score = 24.9 bits (48), Expect(2) = 9.3
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3 / -1

                                          
Query: 369  AYSLLFFLLLGQMWFSGGGHRQRVTHQRRG 458
            A+ +   L +GQ+ F  G     ++HQ+RG
Sbjct: 1049 AFLVQVHLAIGQLGFIDGSKLADLSHQQRG 960

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>LOC_Os05g51860:12005.t04611:unspliced-genomic conserved hypothetical protein|
          Length = 3861

 Score = 25.4 bits (49), Expect(2) = 9.4
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +2 / +1

                                
Query: 362  DGGLFPALFSTPWSDVVFRW 421
            +GG  PAL   PW     RW
Sbjct: 2107 EGGSSPALEGWPWEAATRRW 2166



 Score = 24.4 bits (47), Expect(2) = 9.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2 / +2

                          
Query: 416  RWWAPAASHSPETG 457
            RWW PAA +  + G
Sbjct: 2291 RWWRPAAGNREDDG 2332


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 1,030,606,030
Number of extensions: 18941180
Number of successful extensions: 88220
Number of sequences better than 10.0: 51
Length of query: 760
Length of database: 55,613,886
Length adjustment: 52
Effective length of query: 708
Effective length of database: 52,687,430
Effective search space: 37302700440
Effective search space used: 37302700440
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result