ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf97j13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK106623:Os03g0788200 | 199 | 1e-51 | 2 | AK060475:Os07g0159800 | 194 | 4e-50 | 3 | AK059284:Os07g0159800 | 156 | 1e-38 | 4 | AY288198:Os02g0719000 | 30 | 1.1 | 5 | AK073093:Os02g0719000 | 30 | 1.1 | 6 | AK066828:Os10g0190100 | 28 | 4.2 | 7 | AK066414:Os04g0583500 | 28 | 7.2 | 8 | AK062225:Os04g0583500 | 28 | 7.2 | 9 | AF247165:Os04g0583500 | 28 | 7.2 | 10 | AK111704:Os04g0557200 | 27 | 9.5 |
|---|
>AK106623:Os03g0788200 | Length = 156 Score = 199 bits (507), Expect = 1e-51 Identities = 95/127 (74%), Positives = 107/127 (84%) Frame = +2 Query: 128 DFEYCNKGRHYPVKVSGVEISPDPVVRGKPATFKISASTDKTITKGKLVVDVWYFFFHVD 307 D EYC +GR YPVKVSGVEI PDPVV G+PATFKISASTDK+ITKGKLV+DV YFFFHV Sbjct: 30 DVEYCRQGRDYPVKVSGVEIVPDPVVSGQPATFKISASTDKSITKGKLVIDVKYFFFHVH 89 Query: 308 SETHDFCAGTPCPATGEFVLTSEQTLPSFTPPGSYSLQMKLLGDKKEELTCISFGFNIGF 487 SE+H+ C T CP TGEFVL EQTLPS TPPGSY+L M+LL D +ELTCISFGF+IGF Sbjct: 90 SESHNLCEETSCPVTGEFVLAHEQTLPSITPPGSYTLTMRLLDDGNKELTCISFGFSIGF 149 Query: 488 IAPVATI 508 I+P+A I Sbjct: 150 ISPLALI 156
>AK060475:Os07g0159800 | Length = 152 Score = 194 bits (493), Expect = 4e-50 Identities = 91/127 (71%), Positives = 107/127 (84%) Frame = +2 Query: 128 DFEYCNKGRHYPVKVSGVEISPDPVVRGKPATFKISASTDKTITKGKLVVDVWYFFFHVD 307 D EYCNKG+ YPVKVSGVEI PDPV RG+PATFKISASTDKTI KGKLV+DV YFFF+V Sbjct: 26 DVEYCNKGKKYPVKVSGVEIVPDPVARGEPATFKISASTDKTIGKGKLVIDVKYFFFYVH 85 Query: 308 SETHDFCAGTPCPATGEFVLTSEQTLPSFTPPGSYSLQMKLLGDKKEELTCISFGFNIGF 487 SET + C T CPA+G+F++ +QTLPS+TPPGSY++ MK+LGD EEL+CISFGF+IGF Sbjct: 86 SETRELCDVTSCPASGDFLVAHQQTLPSYTPPGSYTITMKMLGDNDEELSCISFGFSIGF 145 Query: 488 IAPVATI 508 A ATI Sbjct: 146 AASEATI 152
>AK059284:Os07g0159800 | Length = 105 Score = 156 bits (394), Expect = 1e-38 Identities = 73/105 (69%), Positives = 88/105 (83%) Frame = +2 Query: 194 DPVVRGKPATFKISASTDKTITKGKLVVDVWYFFFHVDSETHDFCAGTPCPATGEFVLTS 373 DPV RG+PATFKISASTDKTI KGKLV+DV YFFF+V SET + C T CPA+G+F++ Sbjct: 1 DPVARGEPATFKISASTDKTIGKGKLVIDVKYFFFYVHSETRELCDVTSCPASGDFLVAH 60 Query: 374 EQTLPSFTPPGSYSLQMKLLGDKKEELTCISFGFNIGFIAPVATI 508 +QTLPS+TPPGSY++ MK+LGD EEL+CISFGF+IGF A ATI Sbjct: 61 QQTLPSYTPPGSYTITMKMLGDNDEELSCISFGFSIGFAASEATI 105
>AY288198:Os02g0719000 | Length = 254 Score = 30.4 bits (67), Expect = 1.1 Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 1/86 (1%) Frame = +2 Query: 227 KISASTDKTITKGKLVVD-VWYFFFHVDSETHDFCAGTPCPATGEFVLTSEQTLPSFTPP 403 K + S I G + VW VDS +P P +V E T Sbjct: 161 KFTFSVSNNIVSGLRYTNAVWKTGIKVDSHKEMLGTFSPQPEPYTYVTPEETTPSGMFAR 220 Query: 404 GSYSLQMKLLGDKKEELTCISFGFNI 481 GSYS + K L D ++ I++ F+I Sbjct: 221 GSYSARTKFLDDDRKCYLEINYTFDI 246
>AK073093:Os02g0719000 | Length = 377 Score = 30.4 bits (67), Expect = 1.1 Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 1/86 (1%) Frame = +2 Query: 227 KISASTDKTITKGKLVVD-VWYFFFHVDSETHDFCAGTPCPATGEFVLTSEQTLPSFTPP 403 K + S I G + VW VDS +P P +V E T Sbjct: 284 KFTFSVSNNIVSGLRYTNAVWKTGIKVDSHKEMLGTFSPQPEPYTYVTPEETTPSGMFAR 343 Query: 404 GSYSLQMKLLGDKKEELTCISFGFNI 481 GSYS + K L D ++ I++ F+I Sbjct: 344 GSYSARTKFLDDDRKCYLEINYTFDI 369
>AK066828:Os10g0190100 | Length = 334 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -3 Query: 580 TYKRGVLFATATKGVFGPRHIFGSDSGDRRDEP 482 T+ + + FATA +G + P + GSD R P Sbjct: 74 TWLKALAFATAVRGTYPPPPVAGSDDEGNRRHP 106
>AK066414:Os04g0583500 | Length = 257 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +2 Query: 206 RGKPATFKISASTDKTITKGKLVVDVWYF 292 RG+P +F++++S KT+T +V W F Sbjct: 218 RGQPLSFELTSSDGKTLTNYNVVPKEWDF 246
>AK062225:Os04g0583500 | Length = 257 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +2 Query: 206 RGKPATFKISASTDKTITKGKLVVDVWYF 292 RG+P +F++++S KT+T +V W F Sbjct: 218 RGQPLSFELTSSDGKTLTNYNVVPKEWDF 246
>AF247165:Os04g0583500 | Length = 257 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +2 Query: 206 RGKPATFKISASTDKTITKGKLVVDVWYF 292 RG+P +F++++S KT+T +V W F Sbjct: 218 RGQPLSFELTSSDGKTLTNYNVVPKEWDF 246
>AK111704:Os04g0557200 | Length = 563 Score = 27.3 bits (59), Expect = 9.5 Identities = 15/56 (26%), Positives = 28/56 (50%) Frame = -1 Query: 345 GQGVPAQKS*VSESTWKKKYHTSTTSFPLVMVLSVEAEILKVAGLPRTTGSGEIST 178 GQG+P + + S W + ++ + L +L+ A I + +P T+G E+ T Sbjct: 133 GQGLPGKSYASNASVWLRNAQSADSKTFLRSLLAKSASIQTIICIPFTSGVLELGT 188 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 16,849,356 Number of extensions: 359181 Number of successful extensions: 1007 Number of sequences better than 10.0: 10 Number of HSP's gapped: 1007 Number of HSP's successfully gapped: 10 Length of query: 223 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 126 Effective length of database: 11,515,878 Effective search space: 1451000628 Effective search space used: 1451000628 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
