Clone Name | FLbaf97j13 |
---|---|
Clone Library Name | barley_pub |
>emb|CT831545.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA017G10, full insert sequence Length = 719 Score = 139 bits (70), Expect = 1e-29 Identities = 139/162 (85%) Strand = Plus / Plus Query: 158 tatccggtgaaggtgagcggcgtggagatctcccccgaccccgtcgtgcgcggcaagccc 217 ||||| |||||||||||||| ||||||||| ||| ||||||||||| |||| |||| Sbjct: 215 tatcctgtgaaggtgagcggagtggagatcgtccctgaccccgtcgtcagcgggcagccg 274 Query: 218 gccaccttcaagatctccgcctccacggataaaaccatcaccaaagggaagctggtggta 277 |||||||||||||||||||| ||||||||||||| |||||| || |||||||| ||| || Sbjct: 275 gccaccttcaagatctccgcatccacggataaaagcatcactaaggggaagctcgtgata 334 Query: 278 gatgtgtggtacttcttcttccacgtcgattcagaaactcac 319 ||||| ||||||||| ||||| ||| ||||||||| |||| Sbjct: 335 gatgtcaagtacttctttttccatgtccattcagaaagtcac 376 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Plus Query: 447 aggagctgacctgcatctccttcggcttcaacatcgggttcat 489 |||| |||||||||||||| || || |||| |||||||||||| Sbjct: 504 aggaactgacctgcatctcgtttgggttcagcatcgggttcat 546
>ref|NM_001058035.1| Oryza sativa (japonica cultivar-group) Os03g0788200 (Os03g0788200) mRNA, complete cds Length = 678 Score = 139 bits (70), Expect = 1e-29 Identities = 139/162 (85%) Strand = Plus / Plus Query: 158 tatccggtgaaggtgagcggcgtggagatctcccccgaccccgtcgtgcgcggcaagccc 217 ||||| |||||||||||||| ||||||||| ||| ||||||||||| |||| |||| Sbjct: 177 tatcctgtgaaggtgagcggagtggagatcgtccctgaccccgtcgtcagcgggcagccg 236 Query: 218 gccaccttcaagatctccgcctccacggataaaaccatcaccaaagggaagctggtggta 277 |||||||||||||||||||| ||||||||||||| |||||| || |||||||| ||| || Sbjct: 237 gccaccttcaagatctccgcatccacggataaaagcatcactaaggggaagctcgtgata 296 Query: 278 gatgtgtggtacttcttcttccacgtcgattcagaaactcac 319 ||||| ||||||||| ||||| ||| ||||||||| |||| Sbjct: 297 gatgtcaagtacttctttttccatgtccattcagaaagtcac 338 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Plus Query: 447 aggagctgacctgcatctccttcggcttcaacatcgggttcat 489 |||| |||||||||||||| || || |||| |||||||||||| Sbjct: 466 aggaactgacctgcatctcgtttgggttcagcatcgggttcat 508
>dbj|AK106623.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-B04, full insert sequence Length = 678 Score = 131 bits (66), Expect = 4e-27 Identities = 138/162 (85%) Strand = Plus / Plus Query: 158 tatccggtgaaggtgagcggcgtggagatctcccccgaccccgtcgtgcgcggcaagccc 217 ||||| |||||||||||||| || |||||| ||| ||||||||||| |||| |||| Sbjct: 177 tatcctgtgaaggtgagcggagtagagatcgtccctgaccccgtcgtcagcgggcagccg 236 Query: 218 gccaccttcaagatctccgcctccacggataaaaccatcaccaaagggaagctggtggta 277 |||||||||||||||||||| ||||||||||||| |||||| || |||||||| ||| || Sbjct: 237 gccaccttcaagatctccgcatccacggataaaagcatcactaaggggaagctcgtgata 296 Query: 278 gatgtgtggtacttcttcttccacgtcgattcagaaactcac 319 ||||| ||||||||| ||||| ||| ||||||||| |||| Sbjct: 297 gatgtcaagtacttctttttccatgtccattcagaaagtcac 338 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Plus Query: 447 aggagctgacctgcatctccttcggcttcaacatcgggttcat 489 |||| |||||||||||||| || || |||| |||||||||||| Sbjct: 466 aggaactgacctgcatctcgtttgggttcagcatcgggttcat 508
>emb|CT829198.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN017A24, full insert sequence Length = 708 Score = 119 bits (60), Expect = 1e-23 Identities = 144/172 (83%) Strand = Plus / Plus Query: 127 cgacttcgagtactgcaataagggccgccactatccggtgaaggtgagcggcgtggagat 186 |||| |||||||||||||||||||| | || |||||||||||||||||||||||||| Sbjct: 148 cgacgtcgagtactgcaataagggcaagaagtacccggtgaaggtgagcggcgtggagat 207 Query: 187 ctcccccgaccccgtcgtgcgcggcaagcccgccaccttcaagatctccgcctccacgga 246 | ||||| || |||| |||||| ||||||| ||||||||||||||||| ||||| || Sbjct: 208 cgtgcccgatccggtcgcccgcggcgagcccgcaaccttcaagatctccgcttccactga 267 Query: 247 taaaaccatcaccaaagggaagctggtggtagatgtgtggtacttcttcttc 298 |||||| ||| |||||||||||||| | |||||| |||||||||||| Sbjct: 268 taaaactatcggtaaagggaagctggttattgatgtgaaatacttcttcttc 319 Score = 56.0 bits (28), Expect = 2e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 380 accctgccatctttcaccccaccaggctcttacagtctccagatgaagctgctgggggac 439 ||||||||||| | ||| |||||||||||||||| || |||||| ||||||| || Sbjct: 401 accctgccatcatacactccaccaggctcttacaccatcaccatgaagatgctgggtgat 460 Query: 440 aagaaagaggagctgacctgcatctccttcggcttcaacatcgg 483 || | |||||||||| ||||||||| ||||| |||| |||||| Sbjct: 461 aacgatgaggagctgagctgcatctcgttcgggttcagcatcgg 504
>emb|CT829197.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA211L08, full insert sequence Length = 704 Score = 119 bits (60), Expect = 1e-23 Identities = 144/172 (83%) Strand = Plus / Plus Query: 127 cgacttcgagtactgcaataagggccgccactatccggtgaaggtgagcggcgtggagat 186 |||| |||||||||||||||||||| | || |||||||||||||||||||||||||| Sbjct: 104 cgacgtcgagtactgcaataagggcaagaagtacccggtgaaggtgagcggcgtggagat 163 Query: 187 ctcccccgaccccgtcgtgcgcggcaagcccgccaccttcaagatctccgcctccacgga 246 | ||||| || |||| |||||| ||||||| ||||||||||||||||| ||||| || Sbjct: 164 cgtgcccgatccggtcgcccgcggcgagcccgcaaccttcaagatctccgcttccactga 223 Query: 247 taaaaccatcaccaaagggaagctggtggtagatgtgtggtacttcttcttc 298 |||||| ||| |||||||||||||| | |||||| |||||||||||| Sbjct: 224 taaaactatcggtaaagggaagctggttattgatgtgaaatacttcttcttc 275 Score = 56.0 bits (28), Expect = 2e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 380 accctgccatctttcaccccaccaggctcttacagtctccagatgaagctgctgggggac 439 ||||||||||| | ||| |||||||||||||||| || |||||| ||||||| || Sbjct: 357 accctgccatcatacactccaccaggctcttacaccatcaccatgaagatgctgggtgat 416 Query: 440 aagaaagaggagctgacctgcatctccttcggcttcaacatcgg 483 || | |||||||||| ||||||||| ||||| |||| |||||| Sbjct: 417 aacgatgaggagctgagctgcatctcgttcgggttcagcatcgg 460
>ref|NM_001065469.1| Oryza sativa (japonica cultivar-group) Os07g0159800 (Os07g0159800) mRNA, complete cds Length = 661 Score = 119 bits (60), Expect = 1e-23 Identities = 144/172 (83%) Strand = Plus / Plus Query: 127 cgacttcgagtactgcaataagggccgccactatccggtgaaggtgagcggcgtggagat 186 |||| |||||||||||||||||||| | || |||||||||||||||||||||||||| Sbjct: 105 cgacgtcgagtactgcaataagggcaagaagtacccggtgaaggtgagcggcgtggagat 164 Query: 187 ctcccccgaccccgtcgtgcgcggcaagcccgccaccttcaagatctccgcctccacgga 246 | ||||| || |||| |||||| ||||||| ||||||||||||||||| ||||| || Sbjct: 165 cgtgcccgatccggtcgcccgcggcgagcccgcaaccttcaagatctccgcttccactga 224 Query: 247 taaaaccatcaccaaagggaagctggtggtagatgtgtggtacttcttcttc 298 |||||| ||| |||||||||||||| | |||||| |||||||||||| Sbjct: 225 taaaactatcggtaaagggaagctggttattgatgtgaaatacttcttcttc 276 Score = 56.0 bits (28), Expect = 2e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 380 accctgccatctttcaccccaccaggctcttacagtctccagatgaagctgctgggggac 439 ||||||||||| | ||| |||||||||||||||| || |||||| ||||||| || Sbjct: 358 accctgccatcatacactccaccaggctcttacaccatcaccatgaagatgctgggtgat 417 Query: 440 aagaaagaggagctgacctgcatctccttcggcttcaacatcgg 483 || | |||||||||| ||||||||| ||||| |||| |||||| Sbjct: 418 aacgatgaggagctgagctgcatctcgttcgggttcagcatcgg 461
>dbj|AK060475.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-F03, full insert sequence Length = 678 Score = 119 bits (60), Expect = 1e-23 Identities = 144/172 (83%) Strand = Plus / Plus Query: 127 cgacttcgagtactgcaataagggccgccactatccggtgaaggtgagcggcgtggagat 186 |||| |||||||||||||||||||| | || |||||||||||||||||||||||||| Sbjct: 105 cgacgtcgagtactgcaataagggcaagaagtacccggtgaaggtgagcggcgtggagat 164 Query: 187 ctcccccgaccccgtcgtgcgcggcaagcccgccaccttcaagatctccgcctccacgga 246 | ||||| || |||| |||||| ||||||| ||||||||||||||||| ||||| || Sbjct: 165 cgtgcccgatccggtcgcccgcggcgagcccgcaaccttcaagatctccgcttccactga 224 Query: 247 taaaaccatcaccaaagggaagctggtggtagatgtgtggtacttcttcttc 298 |||||| ||| |||||||||||||| | |||||| |||||||||||| Sbjct: 225 taaaactatcggtaaagggaagctggttattgatgtgaaatacttcttcttc 276 Score = 56.0 bits (28), Expect = 2e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 380 accctgccatctttcaccccaccaggctcttacagtctccagatgaagctgctgggggac 439 ||||||||||| | ||| |||||||||||||||| || |||||| ||||||| || Sbjct: 358 accctgccatcatacactccaccaggctcttacaccatcaccatgaagatgctgggtgat 417 Query: 440 aagaaagaggagctgacctgcatctccttcggcttcaacatcgg 483 || | |||||||||| ||||||||| ||||| |||| |||||| Sbjct: 418 aacgatgaggagctgagctgcatctcgttcgggttcagcatcgg 461
>gb|DQ244339.1| Zea mays clone 5154 mRNA sequence Length = 827 Score = 93.7 bits (47), Expect = 8e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 161 ccggtgaaggtgagcggcgtggagatctcccccgaccccgtcgtgcgcggcaagcccgcc 220 ||||||||||||||||| ||| ||||| ||||| || |||| || ||||||||||||| Sbjct: 223 ccggtgaaggtgagcggggtgcagatcgtgcccgatcctgtcgagcccggcaagcccgcc 282 Query: 221 accttcaagatctccgcctccacggataaaaccatcaccaaagggaagctggtggtagat 280 || |||||||||||||| || || |||||||||||| || |||||||||||| | || Sbjct: 283 actttcaagatctccgcttctactgataaaaccatcgagaaggggaagctggtgatcgac 342 Query: 281 gtgtggtacttcttcttccacgt 303 || ||||||||||||| |||| Sbjct: 343 gtcaagtacttcttcttctacgt 365
>gb|BT018231.1| Zea mays clone EL01N0562D11.c mRNA sequence Length = 606 Score = 93.7 bits (47), Expect = 8e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 161 ccggtgaaggtgagcggcgtggagatctcccccgaccccgtcgtgcgcggcaagcccgcc 220 ||||||||||||||||| ||| ||||| ||||| || |||| || ||||||||||||| Sbjct: 71 ccggtgaaggtgagcggggtgcagatcgtgcccgatccggtcgagcccggcaagcccgcc 130 Query: 221 accttcaagatctccgcctccacggataaaaccatcaccaaagggaagctggtggtagat 280 || |||||||||||||| || || |||||||||||| || |||||||||||| | || Sbjct: 131 actttcaagatctccgcttctactgataaaaccatcgagaaggggaagctggtgatcgac 190 Query: 281 gtgtggtacttcttcttccacgt 303 || ||||||||||||| |||| Sbjct: 191 gtcaagtacttcttcttctacgt 213
>gb|AY108527.1| Zea mays PCO089202 mRNA sequence Length = 666 Score = 93.7 bits (47), Expect = 8e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 161 ccggtgaaggtgagcggcgtggagatctcccccgaccccgtcgtgcgcggcaagcccgcc 220 ||||||||||||||||| ||| ||||| ||||| || |||| || ||||||||||||| Sbjct: 150 ccggtgaaggtgagcggggtgcagatcgtgcccgatccggtcgagcccggcaagcccgcc 209 Query: 221 accttcaagatctccgcctccacggataaaaccatcaccaaagggaagctggtggtagat 280 || |||||||||||||| || || |||||||||||| || |||||||||||| | || Sbjct: 210 actttcaagatctccgcttctactgataaaaccatcgagaaggggaagctggtgatcgac 269 Query: 281 gtgtggtacttcttcttccacgt 303 || ||||||||||||| |||| Sbjct: 270 gtcaagtacttcttcttctacgt 292
>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete sequence Length = 145507 Score = 87.7 bits (44), Expect = 5e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 158 tatccggtgaaggtgagcggcgtggagatctcccccgaccccgtcgtgcgcggcaagccc 217 ||||| |||||||||||||| ||||||||| ||| ||||||||||| |||| |||| Sbjct: 88247 tatcctgtgaaggtgagcggagtggagatcgtccctgaccccgtcgtcagcgggcagccg 88306 Query: 218 gccaccttcaagatctccgcctccacgg 245 |||||||||||||||||||| ||||||| Sbjct: 88307 gccaccttcaagatctccgcatccacgg 88334 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Plus Query: 447 aggagctgacctgcatctccttcggcttcaacatcgggttcat 489 |||| |||||||||||||| || || |||| |||||||||||| Sbjct: 90260 aggaactgacctgcatctcgtttgggttcagcatcgggttcat 90302
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 87.7 bits (44), Expect = 5e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 158 tatccggtgaaggtgagcggcgtggagatctcccccgaccccgtcgtgcgcggcaagccc 217 ||||| |||||||||||||| ||||||||| ||| ||||||||||| |||| |||| Sbjct: 32526629 tatcctgtgaaggtgagcggagtggagatcgtccctgaccccgtcgtcagcgggcagccg 32526688 Query: 218 gccaccttcaagatctccgcctccacgg 245 |||||||||||||||||||| ||||||| Sbjct: 32526689 gccaccttcaagatctccgcatccacgg 32526716 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Plus Query: 447 aggagctgacctgcatctccttcggcttcaacatcgggttcat 489 |||| |||||||||||||| || || |||| |||||||||||| Sbjct: 32528642 aggaactgacctgcatctcgtttgggttcagcatcgggttcat 32528684
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 161 ccggtgaaggtgagcggcgtggagatctcccccgaccccgtcgtgcgcggcaagcccgcc 220 ||||||||||||||||||||||||||| ||||| || |||| |||||| ||||||| Sbjct: 3231258 ccggtgaaggtgagcggcgtggagatcgtgcccgatccggtcgcccgcggcgagcccgca 3231317 Query: 221 accttcaagatctccgcctccac 243 ||||||||||||||||| ||||| Sbjct: 3231318 accttcaagatctccgcttccac 3231340
>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455F03 Length = 158201 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 161 ccggtgaaggtgagcggcgtggagatctcccccgaccccgtcgtgcgcggcaagcccgcc 220 ||||||||||||||||||||||||||| ||||| || |||| |||||| ||||||| Sbjct: 146248 ccggtgaaggtgagcggcgtggagatcgtgcccgatccggtcgcccgcggcgagcccgca 146307 Query: 221 accttcaagatctccgcctccac 243 ||||||||||||||||| ||||| Sbjct: 146308 accttcaagatctccgcttccac 146330
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 161 ccggtgaaggtgagcggcgtggagatctcccccgaccccgtcgtgcgcggcaagcccgcc 220 ||||||||||||||||||||||||||| ||||| || |||| |||||| ||||||| Sbjct: 40951 ccggtgaaggtgagcggcgtggagatcgtgcccgatccggtcgcccgcggcgagcccgca 41010 Query: 221 accttcaagatctccgcctccac 243 ||||||||||||||||| ||||| Sbjct: 41011 accttcaagatctccgcttccac 41033
>gb|AY109152.1| Zea mays PCO089203 mRNA sequence Length = 811 Score = 83.8 bits (42), Expect = 7e-13 Identities = 99/118 (83%) Strand = Plus / Plus Query: 156 actatccggtgaaggtgagcggcgtggagatctcccccgaccccgtcgtgcgcggcaagc 215 |||| ||||||||||||||||| ||| ||||| ||||| || |||| | |||||||| Sbjct: 156 actacccggtgaaggtgagcggggtgcagatcctgcccgatccggtcgaacccggcaagc 215 Query: 216 ccgccaccttcaagatctccgcctccacggataaaaccatcaccaaagggaagctggt 273 ||||||| |||||||||||||| || || |||||||||||| || ||||||||||| Sbjct: 216 ccgccactttcaagatctccgcttctactgataaaaccatcgagaaggggaagctggt 273
>dbj|AK059284.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-D07, full insert sequence Length = 566 Score = 73.8 bits (37), Expect = 7e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 206 cgcggcaagcccgccaccttcaagatctccgcctccacggataaaaccatcaccaaaggg 265 |||||| ||||||| ||||||||||||||||| ||||| |||||||| ||| |||||| Sbjct: 15 cgcggcgagcccgcaaccttcaagatctccgcttccactgataaaactatcggtaaaggg 74 Query: 266 aagctggtggtagatgtgtggtacttcttcttc 298 |||||||| | |||||| |||||||||||| Sbjct: 75 aagctggttattgatgtgaaatacttcttcttc 107 Score = 56.0 bits (28), Expect = 2e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 380 accctgccatctttcaccccaccaggctcttacagtctccagatgaagctgctgggggac 439 ||||||||||| | ||| |||||||||||||||| || |||||| ||||||| || Sbjct: 189 accctgccatcatacactccaccaggctcttacaccatcaccatgaagatgctgggtgat 248 Query: 440 aagaaagaggagctgacctgcatctccttcggcttcaacatcgg 483 || | |||||||||| ||||||||| ||||| |||| |||||| Sbjct: 249 aacgatgaggagctgagctgcatctcgttcgggttcagcatcgg 292
>gb|AC110597.7| Homo sapiens chromosome 18, clone CTD-2541J13, complete sequence Length = 180310 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 270 tggtggtagatgtgtggtacttcttct 296 |||| |||||||||||||||||||||| Sbjct: 74685 tggttgtagatgtgtggtacttcttct 74711
>gb|AY263359.1| Guzmania lingulata 5aT7ethylene-responsive mRNA, partial cds Length = 303 Score = 44.1 bits (22), Expect = 0.63 Identities = 43/50 (86%) Strand = Plus / Plus Query: 446 gaggagctgacctgcatctccttcggcttcaacatcgggttcatcgcgcc 495 ||||| ||||||||||| |||||| ||||| ||| ||||| |||||||| Sbjct: 107 gaggaactgacctgcataaccttcgacttcagcattgggtttatcgcgcc 156
>dbj|AK028588.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732406G15 product:mitochondrial solute carrier protein, full insert sequence Length = 2904 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 263 gggaagctggtggtagatgtgt 284 |||||||||||||||||||||| Sbjct: 86 gggaagctggtggtagatgtgt 107
>dbj|AK021203.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330015G08 product:mitochondrial solute carrier protein, full insert sequence Length = 799 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 263 gggaagctggtggtagatgtgt 284 |||||||||||||||||||||| Sbjct: 662 gggaagctggtggtagatgtgt 683
>gb|AF361699.1|AF361699 Mus musculus mitochondrial carrier-like protein mRNA, complete cds; nuclear gene for mitochondrial product Length = 5869 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 263 gggaagctggtggtagatgtgt 284 |||||||||||||||||||||| Sbjct: 729 gggaagctggtggtagatgtgt 750
>gb|AC134575.3| Mus musculus BAC clone RP24-67I21 from chromosome 14, complete sequence Length = 172103 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 263 gggaagctggtggtagatgtgt 284 |||||||||||||||||||||| Sbjct: 123854 gggaagctggtggtagatgtgt 123875
>emb|CT025562.10| Mouse DNA sequence from clone RP24-225O12 on chromosome 14, complete sequence Length = 194430 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 263 gggaagctggtggtagatgtgt 284 |||||||||||||||||||||| Sbjct: 171292 gggaagctggtggtagatgtgt 171271
>emb|BX927344.10| Zebrafish DNA sequence from clone DKEY-156H5 in linkage group 7, complete sequence Length = 85242 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 385 gccatctttcaccccaccagg 405 ||||||||||||||||||||| Sbjct: 50801 gccatctttcaccccaccagg 50781
>gb|AC108071.2| Homo sapiens BAC clone RP11-688P1 from 4, complete sequence Length = 64873 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 tgtgctgggactccctgtccc 346 ||||||||||||||||||||| Sbjct: 8752 tgtgctgggactccctgtccc 8772
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 191 cccgaccccgtcgtgcgcggcaagc 215 |||||||||| |||||||||||||| Sbjct: 115276 cccgaccccgacgtgcgcggcaagc 115252
>ref|NM_001050844.1| Oryza sativa (japonica cultivar-group) Os01g0759200 (Os01g0759200) mRNA, complete cds Length = 1689 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 cgccaccttcaagatctccgcctc 240 ||||||||| |||||||||||||| Sbjct: 1365 cgccaccttgaagatctccgcctc 1342
>ref|XM_514278.2| PREDICTED: Pan troglodytes similar to mKIAA0435 protein (LOC457826), mRNA Length = 6816 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 gaggagctgacctgcatctc 465 |||||||||||||||||||| Sbjct: 2454 gaggagctgacctgcatctc 2435
>ref|XM_001103403.1| PREDICTED: Macaca mulatta similar to pecanex-like 2 isoform 1, transcript variant 1 (LOC712828), mRNA Length = 5763 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 gaggagctgacctgcatctc 465 |||||||||||||||||||| Sbjct: 1634 gaggagctgacctgcatctc 1615
>ref|XM_001103740.1| PREDICTED: Macaca mulatta similar to pecanex-like 2 isoform 1, transcript variant 3 (LOC712828), mRNA Length = 6011 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 gaggagctgacctgcatctc 465 |||||||||||||||||||| Sbjct: 1657 gaggagctgacctgcatctc 1638
>gb|BC008300.1| Homo sapiens pecanex-like 2 (Drosophila), mRNA (cDNA clone MGC:15062 IMAGE:2959567), complete cds Length = 2205 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 gaggagctgacctgcatctc 465 |||||||||||||||||||| Sbjct: 534 gaggagctgacctgcatctc 515
>gb|BC014639.1| Homo sapiens pecanex-like 2 (Drosophila), mRNA (cDNA clone IMAGE:2959567), containing frame-shift errors Length = 2205 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 gaggagctgacctgcatctc 465 |||||||||||||||||||| Sbjct: 534 gaggagctgacctgcatctc 515
>ref|NM_024938.2| Homo sapiens pecanex-like 2 (Drosophila) (PCNXL2), transcript variant 2, mRNA Length = 3399 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 gaggagctgacctgcatctc 465 |||||||||||||||||||| Sbjct: 1728 gaggagctgacctgcatctc 1709
>ref|NM_014801.2| Homo sapiens pecanex-like 2 (Drosophila) (PCNXL2), transcript variant 1, mRNA Length = 5887 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 gaggagctgacctgcatctc 465 |||||||||||||||||||| Sbjct: 1728 gaggagctgacctgcatctc 1709
>gb|AC165245.2| Mus musculus BAC clone RP24-376N22 from chromosome 9, complete sequence Length = 217074 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 aaactcacgacttctgtgct 331 |||||||||||||||||||| Sbjct: 209511 aaactcacgacttctgtgct 209492
>gb|AC154573.2| Mus musculus BAC clone RP23-398O19 from chromosome 14, complete sequence Length = 197419 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 cttctgtgctgggactccct 341 |||||||||||||||||||| Sbjct: 188272 cttctgtgctgggactccct 188291
>gb|AC165244.2| Mus musculus BAC clone RP24-498C9 from chromosome 14, complete sequence Length = 191747 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cttctgtgctgggactccct 341 |||||||||||||||||||| Sbjct: 139582 cttctgtgctgggactccct 139563
>gb|AF464544.1| Hepatitis C virus clone C14-21 polyprotein gene, nonstructural protein NS5A region, partial cds Length = 198 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 gatctccgcctccacggata 248 |||||||||||||||||||| Sbjct: 198 gatctccgcctccacggata 179
>dbj|AK021445.1| Homo sapiens cDNA FLJ11383 fis, clone HEMBA1000518, weakly similar to PECANEX PROTEIN Length = 1833 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 gaggagctgacctgcatctc 465 |||||||||||||||||||| Sbjct: 454 gaggagctgacctgcatctc 435
>gb|AC087641.5| Homo sapiens chromosome 15, clone RP11-368J22, complete sequence Length = 178066 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gttgcagttgcaaagagcac 565 |||||||||||||||||||| Sbjct: 55376 gttgcagttgcaaagagcac 55357
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 cgccaccttcaagatctccgcctc 240 ||||||||| |||||||||||||| Sbjct: 31932070 cgccaccttgaagatctccgcctc 31932093
>emb|AL139342.7| Human DNA sequence from clone RP5-1016N21 on chromosome 1q42.13-43 Contains the 5' end of a novel gene (FLJ11383), complete sequence Length = 151553 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 gaggagctgacctgcatctc 465 |||||||||||||||||||| Sbjct: 116843 gaggagctgacctgcatctc 116862
>dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131G08 Length = 158241 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 cgccaccttcaagatctccgcctc 240 ||||||||| |||||||||||||| Sbjct: 118148 cgccaccttgaagatctccgcctc 118171
>gb|AC012074.9| Homo sapiens BAC clone RP11-458N5 from 2, complete sequence Length = 197652 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 448 ggagctgacctgcatctccttcggcttc 475 ||||||||||| |||||||||| ||||| Sbjct: 45493 ggagctgacctccatctccttctgcttc 45466
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 cgaccccgtcgtgcgcggca 212 |||||||||||||||||||| Sbjct: 6351582 cgaccccgtcgtgcgcggca 6351563
>gb|AC139932.4| Homo sapiens 3 BAC RP11-463A8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 103273 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 aagctgctgggggacaagaaagag 448 ||||||||||||||||| |||||| Sbjct: 50660 aagctgctgggggacaacaaagag 50637
>gb|AC013394.12| Homo sapiens chromosome 15, clone RP11-437B10, complete sequence Length = 182320 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gttgcagttgcaaagagcac 565 |||||||||||||||||||| Sbjct: 71905 gttgcagttgcaaagagcac 71924
>dbj|AK100202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040M01, full insert sequence Length = 1628 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 cgccaccttcaagatctccgcctc 240 ||||||||| |||||||||||||| Sbjct: 1374 cgccaccttgaagatctccgcctc 1351
>dbj|AK069231.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013G02, full insert sequence Length = 1690 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 cgccaccttcaagatctccgcctc 240 ||||||||| |||||||||||||| Sbjct: 1366 cgccaccttgaagatctccgcctc 1343
>ref|NM_017010.1| Rattus norvegicus glutamate receptor, ionotropic, N-methyl D-aspartate 1 (Grin1), mRNA emb|X63255.1|RVNMDAR1 R.norvegicus NMDAR1 mRNA for NMDA receptor Length = 4213 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 ctcccccgaccccgtcgtgc 206 |||||||||||||||||||| Sbjct: 3182 ctcccccgaccccgtcgtgc 3163
>emb|BX470122.3| Mouse DNA sequence from clone RP24-82G12 on chromosome 4, complete sequence Length = 22248 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 ccaccaggctcttacagtct 417 |||||||||||||||||||| Sbjct: 11380 ccaccaggctcttacagtct 11399
>gb|AC113480.8| Mus musculus chromosome 13, clone RP23-309D8, complete sequence Length = 181457 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 tgtggtacttcttcttccac 301 |||||||||||||||||||| Sbjct: 93915 tgtggtacttcttcttccac 93896
>emb|CT009732.8| Mouse DNA sequence from clone RP23-72O20 on chromosome 9, complete sequence Length = 239257 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 aaactcacgacttctgtgct 331 |||||||||||||||||||| Sbjct: 129368 aaactcacgacttctgtgct 129349
>gb|U08264.1|RNU08264 Rattus norvegicus Sprague-Dawley N-methyl-D-aspartate receptor NMDAR1-2b subunit (NMDAR1) mRNA, complete cds Length = 4111 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 ctcccccgaccccgtcgtgc 206 |||||||||||||||||||| Sbjct: 3080 ctcccccgaccccgtcgtgc 3061
>gb|U08263.1|RNU08263 Rattus norvegicus Sprague-Dawley N-methyl-D-aspartate receptor NMDAR1-1b subunit (NMDAR1) mRNA, complete cds Length = 4222 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 ctcccccgaccccgtcgtgc 206 |||||||||||||||||||| Sbjct: 3191 ctcccccgaccccgtcgtgc 3172
>gb|U08262.1|RNU08262 Rattus norvegicus Sprague-Dawley N-methyl-D-aspartate receptor NMDAR1-2a subunit (NMDAR1) mRNA, complete cds Length = 4072 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 ctcccccgaccccgtcgtgc 206 |||||||||||||||||||| Sbjct: 3041 ctcccccgaccccgtcgtgc 3022
>gb|U08261.1|RNU08261 Rattus norvegicus Sprague-Dawley N-methyl-D-aspartate receptor NMDAR1-1a subunit (NMDAR1) mRNA, complete cds Length = 4183 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 ctcccccgaccccgtcgtgc 206 |||||||||||||||||||| Sbjct: 3152 ctcccccgaccccgtcgtgc 3133
>emb|AL732309.9| Mouse DNA sequence from clone RP23-132N23 on chromosome 2, complete sequence Length = 221859 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 ctcccccgaccccgtcgtgc 206 |||||||||||||||||||| Sbjct: 184900 ctcccccgaccccgtcgtgc 184919
>ref|NM_008169.1| Mus musculus glutamate receptor, ionotropic, NMDA1 (zeta 1) (Grin1), mRNA dbj|D10028.1|MUSGLURZ1 Mus musculus mRNA for glutamate receptor channel subunit zeta-1, complete cds Length = 3031 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 ctcccccgaccccgtcgtgc 206 |||||||||||||||||||| Sbjct: 3010 ctcccccgaccccgtcgtgc 2991
>gb|L08228.1|RATNMDARI Rattus norvegicus N-methyl-D-aspartate receptor (NMDAR1) gene, exons 1 through 22 Length = 4444 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 ctcccccgaccccgtcgtgc 206 |||||||||||||||||||| Sbjct: 3413 ctcccccgaccccgtcgtgc 3394
>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460E08 Length = 170021 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 cgccaccttcaagatctccgcctc 240 ||||||||| |||||||||||||| Sbjct: 28797 cgccaccttgaagatctccgcctc 28820
>dbj|AK074078.1| Homo sapiens mRNA for FLJ00149 protein Length = 5889 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 gaggagctgacctgcatctc 465 |||||||||||||||||||| Sbjct: 1729 gaggagctgacctgcatctc 1710 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 94,898,652 Number of extensions: 5080496 Number of successful extensions: 104940 Number of sequences better than 10.0: 63 Number of HSP's gapped: 104932 Number of HSP's successfully gapped: 73 Length of query: 669 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 647 Effective length of database: 18,508,616,841 Effective search space: 11975075096127 Effective search space used: 11975075096127 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)