Clone Name | FLbaf97j01 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_001073270.1| Oryza sativa (japonica cultivar-group) Os12g0460800 (Os12g0460800) mRNA, partial cds Length = 1335 Score = 392 bits (198), Expect = e-105 Identities = 285/314 (90%) Strand = Plus / Plus Query: 525 aggtacctttggtcaggtgttggaatgttgggacaaggaacggaaagaaatggtggctat 584 |||||||||||||||||| |||||||||||||| | |||| |||||||||||||||| || Sbjct: 409 aggtacctttggtcaggtattggaatgttgggatagggaaaggaaagaaatggtggccat 468 Query: 585 taagatcatcagaggcattaagaagtacagggatgctgcaatgatagaaattggcatgct 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 taagatcatcagaggcattaagaagtacagggatgctgcaatgatagaaattggcatgct 528 Query: 645 cgagcagcgttgtaaatatgaaaagagcagatccaggtttcatcccgttcaccaaaggag 704 |||||||| | ||||||||||||| || |||||||||||||||||||||| |||||||| Sbjct: 529 cgagcagcttggtaaatatgaaaaaagtagatccaggtttcatcccgttctccaaaggaa 588 Query: 705 ggatcctactacaaacgtgtgcccaagtccagttcaataaaggttattgattttggcagc 764 || ||||| | ||| | |||||||||||||| | || ||||| ||||||||||||||| Sbjct: 589 ggttcctatttcaagcagctgcccaagtccagtgctattaaggtgattgattttggcagc 648 Query: 765 acaacatatgaccagcaggaccagacctatgtagtttctactaggcattatcgggccccg 824 |||||||||||||||||||| ||||||||||| || ||||||||||||||||| || || Sbjct: 649 acaacatatgaccagcaggatcagacctatgtggtgtctactaggcattatcgagctcca 708 Query: 825 gaagttatcctggg 838 ||||||||| |||| Sbjct: 709 gaagttatcttggg 722 Score = 200 bits (101), Expect = 1e-47 Identities = 209/245 (85%) Strand = Plus / Plus Query: 1278 gagaaatatgtgagaaagggccgtttaaactggcctgaaggatgtgcttcacgggaaagc 1337 ||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||| ||| Sbjct: 895 gagaaatatgtcagaaaaggccgtttaaactggcctgaaggttgtgcgtcacgggatagc 954 Query: 1338 atgaaagctgttatgaagctgccccggcttcagaatcttgtgatgcaaaacatagaacat 1397 ||||||||||||||||||||||| || ||||||||||| ||||||||||| |||| ||| Sbjct: 955 atgaaagctgttatgaagctgccacgtcttcagaatctggtgatgcaaaatgtagatcat 1014 Query: 1398 tctgctggggacttcatcaatcttctccaagggctgctgagctatgatccagcaagccgc 1457 |||| || || ||||| | ||| | ||||| ||| | || ||||||||||| |||||| Sbjct: 1015 tctgggggcgagttcattgaccttttgcaaggtctgttaaggtatgatccagctagccgc 1074 Query: 1458 ctaacggcccaagaggcccttgagcatccattcttgatggagcggagtgagcgacgaaga 1517 ||||| || |||||||| ||| |||||||||||||| ||||| | |||||| ||||| Sbjct: 1075 ctaacagcacaagaggcgcttaggcatccattcttgagggagcagtccgagcgaagaaga 1134 Query: 1518 tgacg 1522 ||||| Sbjct: 1135 tgacg 1139 Score = 143 bits (72), Expect = 3e-30 Identities = 102/112 (91%) Strand = Plus / Plus Query: 292 tcgttttgcgacccctcctctgagagaagatgacaaggatgggcactatgtttttgctgt 351 ||||||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||| Sbjct: 301 tcgttttgcttcccctcctctgagagaagatgacaaggatggacactttgtctttgctgt 360 Query: 352 gggagacaacctcacatctcgctataggattaatgcaaaaatgggtgaaggt 403 ||||||||||||||| | || || ||||||||||||||||||||||||||| Sbjct: 361 tggagacaacctcacaccacgatacaggattaatgcaaaaatgggtgaaggt 412 Score = 97.6 bits (49), Expect = 1e-16 Identities = 73/81 (90%) Strand = Plus / Plus Query: 1082 tgtttcaaacccatgaaaatttggagcatcttgctatgatggagagggtgctcgggccgt 1141 ||||||| ||||||||||| ||||||||||||||||||||||||||||| | || || | Sbjct: 797 tgtttcagacccatgaaaacttggagcatcttgctatgatggagagggtatttggtcctt 856 Query: 1142 tgccatatcacatgctcaaaa 1162 |||||| |||||||||||||| Sbjct: 857 tgccatgtcacatgctcaaaa 877 Score = 89.7 bits (45), Expect = 3e-14 Identities = 83/95 (87%), Gaps = 3/95 (3%) Strand = Plus / Plus Query: 91 gatggagtgccttgccgagatgccgcacgcgccgct---cgaccgccgcccgcgcaagcg 147 |||||||||| | ||||||||||||| ||||||||| ||||||||||||||| ||| | Sbjct: 121 gatggagtgcttggccgagatgccgcgcgcgccgctggccgaccgccgcccgcggaagag 180 Query: 148 gcagcgccttggctgggatgtcggccccgagatcc 182 |||||| || || ||||| |||||||||||||||| Sbjct: 181 gcagcggctggggtgggacgtcggccccgagatcc 215 Score = 85.7 bits (43), Expect = 5e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 929 ggacttggatggagttacccatgtgatatctggagcgttggttgtatactagttgaactc 988 |||||||||||||||||||| |||||||| ||||| |||||||||||||| ||||| || Sbjct: 721 ggacttggatggagttacccctgtgatatatggagtgttggttgtatactggttgagcta 780 Query: 989 tgcacgg 995 ||||||| Sbjct: 781 tgcacgg 787
>dbj|AK104229.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-D03, full insert sequence Length = 1247 Score = 392 bits (198), Expect = e-105 Identities = 285/314 (90%) Strand = Plus / Plus Query: 525 aggtacctttggtcaggtgttggaatgttgggacaaggaacggaaagaaatggtggctat 584 |||||||||||||||||| |||||||||||||| | |||| |||||||||||||||| || Sbjct: 381 aggtacctttggtcaggtattggaatgttgggatagggaaaggaaagaaatggtggccat 440 Query: 585 taagatcatcagaggcattaagaagtacagggatgctgcaatgatagaaattggcatgct 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 taagatcatcagaggcattaagaagtacagggatgctgcaatgatagaaattggcatgct 500 Query: 645 cgagcagcgttgtaaatatgaaaagagcagatccaggtttcatcccgttcaccaaaggag 704 |||||||| | ||||||||||||| || |||||||||||||||||||||| |||||||| Sbjct: 501 cgagcagcttggtaaatatgaaaaaagtagatccaggtttcatcccgttctccaaaggaa 560 Query: 705 ggatcctactacaaacgtgtgcccaagtccagttcaataaaggttattgattttggcagc 764 || ||||| | ||| | |||||||||||||| | || ||||| ||||||||||||||| Sbjct: 561 ggttcctatttcaagcagctgcccaagtccagtgctattaaggtgattgattttggcagc 620 Query: 765 acaacatatgaccagcaggaccagacctatgtagtttctactaggcattatcgggccccg 824 |||||||||||||||||||| ||||||||||| || ||||||||||||||||| || || Sbjct: 621 acaacatatgaccagcaggatcagacctatgtggtgtctactaggcattatcgagctcca 680 Query: 825 gaagttatcctggg 838 ||||||||| |||| Sbjct: 681 gaagttatcttggg 694 Score = 200 bits (101), Expect = 1e-47 Identities = 209/245 (85%) Strand = Plus / Plus Query: 1278 gagaaatatgtgagaaagggccgtttaaactggcctgaaggatgtgcttcacgggaaagc 1337 ||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||| ||| Sbjct: 867 gagaaatatgtcagaaaaggccgtttaaactggcctgaaggttgtgcgtcacgggatagc 926 Query: 1338 atgaaagctgttatgaagctgccccggcttcagaatcttgtgatgcaaaacatagaacat 1397 ||||||||||||||||||||||| || ||||||||||| ||||||||||| |||| ||| Sbjct: 927 atgaaagctgttatgaagctgccacgtcttcagaatctggtgatgcaaaatgtagatcat 986 Query: 1398 tctgctggggacttcatcaatcttctccaagggctgctgagctatgatccagcaagccgc 1457 |||| || || ||||| | ||| | ||||| ||| | || ||||||||||| |||||| Sbjct: 987 tctgggggcgagttcattgaccttttgcaaggtctgttaaggtatgatccagctagccgc 1046 Query: 1458 ctaacggcccaagaggcccttgagcatccattcttgatggagcggagtgagcgacgaaga 1517 ||||| || |||||||| ||| |||||||||||||| ||||| | |||||| ||||| Sbjct: 1047 ctaacagcacaagaggcgcttaggcatccattcttgagggagcagtccgagcgaagaaga 1106 Query: 1518 tgacg 1522 ||||| Sbjct: 1107 tgacg 1111 Score = 143 bits (72), Expect = 3e-30 Identities = 102/112 (91%) Strand = Plus / Plus Query: 292 tcgttttgcgacccctcctctgagagaagatgacaaggatgggcactatgtttttgctgt 351 ||||||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||| Sbjct: 273 tcgttttgcttcccctcctctgagagaagatgacaaggatggacactttgtctttgctgt 332 Query: 352 gggagacaacctcacatctcgctataggattaatgcaaaaatgggtgaaggt 403 ||||||||||||||| | || || ||||||||||||||||||||||||||| Sbjct: 333 tggagacaacctcacaccacgatacaggattaatgcaaaaatgggtgaaggt 384 Score = 97.6 bits (49), Expect = 1e-16 Identities = 73/81 (90%) Strand = Plus / Plus Query: 1082 tgtttcaaacccatgaaaatttggagcatcttgctatgatggagagggtgctcgggccgt 1141 ||||||| ||||||||||| ||||||||||||||||||||||||||||| | || || | Sbjct: 769 tgtttcagacccatgaaaacttggagcatcttgctatgatggagagggtatttggtcctt 828 Query: 1142 tgccatatcacatgctcaaaa 1162 |||||| |||||||||||||| Sbjct: 829 tgccatgtcacatgctcaaaa 849 Score = 89.7 bits (45), Expect = 3e-14 Identities = 83/95 (87%), Gaps = 3/95 (3%) Strand = Plus / Plus Query: 91 gatggagtgccttgccgagatgccgcacgcgccgct---cgaccgccgcccgcgcaagcg 147 |||||||||| | ||||||||||||| ||||||||| ||||||||||||||| ||| | Sbjct: 93 gatggagtgcttggccgagatgccgcgcgcgccgctggccgaccgccgcccgcggaagag 152 Query: 148 gcagcgccttggctgggatgtcggccccgagatcc 182 |||||| || || ||||| |||||||||||||||| Sbjct: 153 gcagcggctggggtgggacgtcggccccgagatcc 187 Score = 85.7 bits (43), Expect = 5e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 929 ggacttggatggagttacccatgtgatatctggagcgttggttgtatactagttgaactc 988 |||||||||||||||||||| |||||||| ||||| |||||||||||||| ||||| || Sbjct: 693 ggacttggatggagttacccctgtgatatatggagtgttggttgtatactggttgagcta 752 Query: 989 tgcacgg 995 ||||||| Sbjct: 753 tgcacgg 759
>dbj|AK066287.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064I06, full insert sequence Length = 1336 Score = 385 bits (194), Expect = e-103 Identities = 284/314 (90%) Strand = Plus / Plus Query: 525 aggtacctttggtcaggtgttggaatgttgggacaaggaacggaaagaaatggtggctat 584 |||||||||||||||||| |||||||||||||| | |||| |||||||||||||||| || Sbjct: 410 aggtacctttggtcaggtattggaatgttgggatagggaaaggaaagaaatggtggccat 469 Query: 585 taagatcatcagaggcattaagaagtacagggatgctgcaatgatagaaattggcatgct 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 taagatcatcagaggcattaagaagtacagggatgctgcaatgatagaaattggcatgct 529 Query: 645 cgagcagcgttgtaaatatgaaaagagcagatccaggtttcatcccgttcaccaaaggag 704 |||||||| | ||||||||||||| || |||||||||||||||||||||| |||||||| Sbjct: 530 cgagcagcttggtaaatatgaaaaaagtagatccaggtttcatcccgttctccaaaggaa 589 Query: 705 ggatcctactacaaacgtgtgcccaagtccagttcaataaaggttattgattttggcagc 764 || ||||| | ||| | |||||||||||||| | || ||||| ||||||||||||||| Sbjct: 590 ggttcctatttcaagcagctgcccaagtccagtgctattaaggtgattgattttggcagc 649 Query: 765 acaacatatgaccagcaggaccagacctatgtagtttctactaggcattatcgggccccg 824 |||||||||||||||||||| ||||| ||||| || ||||||||||||||||| || || Sbjct: 650 acaacatatgaccagcaggatcagacatatgtggtgtctactaggcattatcgagctcca 709 Query: 825 gaagttatcctggg 838 ||||||||| |||| Sbjct: 710 gaagttatcttggg 723 Score = 200 bits (101), Expect = 1e-47 Identities = 209/245 (85%) Strand = Plus / Plus Query: 1278 gagaaatatgtgagaaagggccgtttaaactggcctgaaggatgtgcttcacgggaaagc 1337 ||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||| ||| Sbjct: 896 gagaaatatgtcagaaaaggccgtttaaactggcctgaaggttgtgcgtcacgggatagc 955 Query: 1338 atgaaagctgttatgaagctgccccggcttcagaatcttgtgatgcaaaacatagaacat 1397 ||||||||||||||||||||||| || ||||||||||| ||||||||||| |||| ||| Sbjct: 956 atgaaagctgttatgaagctgccacgtcttcagaatctggtgatgcaaaatgtagatcat 1015 Query: 1398 tctgctggggacttcatcaatcttctccaagggctgctgagctatgatccagcaagccgc 1457 |||| || || ||||| | ||| | ||||| ||| | || ||||||||||| |||||| Sbjct: 1016 tctgggggcgagttcattgaccttttgcaaggtctgttaaggtatgatccagctagccgc 1075 Query: 1458 ctaacggcccaagaggcccttgagcatccattcttgatggagcggagtgagcgacgaaga 1517 ||||| || |||||||| ||| |||||||||||||| ||||| | |||||| ||||| Sbjct: 1076 ctaacagcacaagaggcgcttaggcatccattcttgagggagcagtccgagcgaagaaga 1135 Query: 1518 tgacg 1522 ||||| Sbjct: 1136 tgacg 1140 Score = 143 bits (72), Expect = 3e-30 Identities = 102/112 (91%) Strand = Plus / Plus Query: 292 tcgttttgcgacccctcctctgagagaagatgacaaggatgggcactatgtttttgctgt 351 ||||||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||| Sbjct: 302 tcgttttgcttcccctcctctgagagaagatgacaaggatggacactttgtctttgctgt 361 Query: 352 gggagacaacctcacatctcgctataggattaatgcaaaaatgggtgaaggt 403 ||||||||||||||| | || || ||||||||||||||||||||||||||| Sbjct: 362 tggagacaacctcacaccacgatacaggattaatgcaaaaatgggtgaaggt 413 Score = 97.6 bits (49), Expect = 1e-16 Identities = 73/81 (90%) Strand = Plus / Plus Query: 1082 tgtttcaaacccatgaaaatttggagcatcttgctatgatggagagggtgctcgggccgt 1141 ||||||| ||||||||||| ||||||||||||||||||||||||||||| | || || | Sbjct: 798 tgtttcagacccatgaaaacttggagcatcttgctatgatggagagggtatttggtcctt 857 Query: 1142 tgccatatcacatgctcaaaa 1162 |||||| |||||||||||||| Sbjct: 858 tgccatgtcacatgctcaaaa 878 Score = 89.7 bits (45), Expect = 3e-14 Identities = 83/95 (87%), Gaps = 3/95 (3%) Strand = Plus / Plus Query: 91 gatggagtgccttgccgagatgccgcacgcgccgct---cgaccgccgcccgcgcaagcg 147 |||||||||| | ||||||||||||| ||||||||| ||||||||||||||| ||| | Sbjct: 122 gatggagtgcttggccgagatgccgcgcgcgccgctggccgaccgccgcccgcggaagag 181 Query: 148 gcagcgccttggctgggatgtcggccccgagatcc 182 |||||| || || ||||| |||||||||||||||| Sbjct: 182 gcagcggctggggtgggacgtcggccccgagatcc 216 Score = 85.7 bits (43), Expect = 5e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 929 ggacttggatggagttacccatgtgatatctggagcgttggttgtatactagttgaactc 988 |||||||||||||||||||| |||||||| ||||| |||||||||||||| ||||| || Sbjct: 722 ggacttggatggagttacccctgtgatatatggagtgttggttgtatactggttgagcta 781 Query: 989 tgcacgg 995 ||||||| Sbjct: 782 tgcacgg 788
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 256 bits (129), Expect = 2e-64 Identities = 156/165 (94%) Strand = Plus / Minus Query: 518 atacatcaggtacctttggtcaggtgttggaatgttgggacaaggaacggaaagaaatgg 577 ||||||||||||||||||||||||| |||||||||||||| | |||| |||||||||||| Sbjct: 16243549 atacatcaggtacctttggtcaggtattggaatgttgggatagggaaaggaaagaaatgg 16243490 Query: 578 tggctattaagatcatcagaggcattaagaagtacagggatgctgcaatgatagaaattg 637 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16243489 tggccattaagatcatcagaggcattaagaagtacagggatgctgcaatgatagaaattg 16243430 Query: 638 gcatgctcgagcagcgttgtaaatatgaaaagagcagatccaggt 682 ||||||||||||||| | ||||||||||||| || |||||||||| Sbjct: 16243429 gcatgctcgagcagcttggtaaatatgaaaaaagtagatccaggt 16243385 Score = 172 bits (87), Expect = 3e-39 Identities = 159/183 (86%) Strand = Plus / Minus Query: 679 aggtttcatcccgttcaccaaaggagggatcctactacaaacgtgtgcccaagtccagtt 738 |||||||||||||||| |||||||| || ||||| | ||| | |||||||||||||| Sbjct: 16242614 aggtttcatcccgttctccaaaggaaggttcctatttcaagcagctgcccaagtccagtg 16242555 Query: 739 caataaaggttattgattttggcagcacaacatatgaccagcaggaccagacctatgtag 798 | || ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 16242554 ctattaaggtgattgattttggcagcacaacatatgaccagcaggatcagacctatgtgg 16242495 Query: 799 tttctactaggcattatcgggccccggaagttatcctgggtatctttcttgtccagtgca 858 | ||||||||||||||||| || || ||||||||| ||||||| | ||||| | |||||| Sbjct: 16242494 tgtctactaggcattatcgagctccagaagttatcttgggtatttgtcttgcctagtgca 16242435 Query: 859 aag 861 ||| Sbjct: 16242434 aag 16242432 Score = 145 bits (73), Expect = 6e-31 Identities = 127/145 (87%) Strand = Plus / Minus Query: 1046 tttttgagttaccagaggtactgcagggagaggcgctgtttcaaacccatgaaaatttgg 1105 |||||||||||| | || ||| ||||||||| || ||||||| ||||||||||| |||| Sbjct: 16242251 tttttgagttacgaaagctaccgcagggagaagcattgtttcagacccatgaaaacttgg 16242192 Query: 1106 agcatcttgctatgatggagagggtgctcgggccgttgccatatcacatgctcaaaaagg 1165 ||||||||||||||||||||||||| | || || ||||||| |||||||||||||| || Sbjct: 16242191 agcatcttgctatgatggagagggtatttggtcctttgccatgtcacatgctcaaaaggg 16242132 Query: 1166 ccgagtatgttgctgttcttgatcc 1190 | |||||||||||||| |||||||| Sbjct: 16242131 cagagtatgttgctgtccttgatcc 16242107 Score = 129 bits (65), Expect = 4e-26 Identities = 86/93 (92%) Strand = Plus / Minus Query: 1278 gagaaatatgtgagaaagggccgtttaaactggcctgaaggatgtgcttcacgggaaagc 1337 ||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||| ||| Sbjct: 16242022 gagaaatatgtcagaaaaggccgtttaaactggcctgaaggttgtgcgtcacgggatagc 16241963 Query: 1338 atgaaagctgttatgaagctgccccggcttcag 1370 ||||||||||||||||||||||| || |||||| Sbjct: 16241962 atgaaagctgttatgaagctgccacgtcttcag 16241930 Score = 103 bits (52), Expect = 2e-18 Identities = 70/76 (92%) Strand = Plus / Minus Query: 292 tcgttttgcgacccctcctctgagagaagatgacaaggatgggcactatgtttttgctgt 351 ||||||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||| Sbjct: 16243879 tcgttttgcttcccctcctctgagagaagatgacaaggatggacactttgtctttgctgt 16243820 Query: 352 gggagacaacctcaca 367 ||||||||||||||| Sbjct: 16243819 tggagacaacctcaca 16243804 Score = 93.7 bits (47), Expect = 2e-15 Identities = 68/75 (90%) Strand = Plus / Minus Query: 923 tgtttaggacttggatggagttacccatgtgatatctggagcgttggttgtatactagtt 982 |||| ||||||||||||||||||||| |||||||| ||||| |||||||||||||| ||| Sbjct: 16242376 tgttcaggacttggatggagttacccctgtgatatatggagtgttggttgtatactggtt 16242317 Query: 983 gaactctgcacggta 997 || || ||||||||| Sbjct: 16242316 gagctatgcacggta 16242302 Score = 89.7 bits (45), Expect = 3e-14 Identities = 83/95 (87%), Gaps = 3/95 (3%) Strand = Plus / Minus Query: 91 gatggagtgccttgccgagatgccgcacgcgccgct---cgaccgccgcccgcgcaagcg 147 |||||||||| | ||||||||||||| ||||||||| ||||||||||||||| ||| | Sbjct: 16244720 gatggagtgcttggccgagatgccgcgcgcgccgctggccgaccgccgcccgcggaagag 16244661 Query: 148 gcagcgccttggctgggatgtcggccccgagatcc 182 |||||| || || ||||| |||||||||||||||| Sbjct: 16244660 gcagcggctggggtgggacgtcggccccgagatcc 16244626 Score = 77.8 bits (39), Expect = 1e-10 Identities = 126/155 (81%) Strand = Plus / Minus Query: 1368 cagaatcttgtgatgcaaaacatagaacattctgctggggacttcatcaatcttctccaa 1427 |||||||| ||||||||||| |||| ||||||| || || ||||| | ||| | ||| Sbjct: 16241851 cagaatctggtgatgcaaaatgtagatcattctgggggcgagttcattgaccttttgcaa 16241792 Query: 1428 gggctgctgagctatgatccagcaagccgcctaacggcccaagaggcccttgagcatcca 1487 || ||| | || ||||||||||| ||||||||||| || |||||||| ||| ||||||| Sbjct: 16241791 ggtctgttaaggtatgatccagctagccgcctaacagcacaagaggcgcttaggcatcca 16241732 Query: 1488 ttcttgatggagcggagtgagcgacgaagatgacg 1522 ||||||| ||||| | |||||| |||||||||| Sbjct: 16241731 ttcttgagggagcagtccgagcgaagaagatgacg 16241697 Score = 65.9 bits (33), Expect = 5e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 377 aggattaatgcaaaaatgggtgaaggtcagttcggacagcagcct 421 |||||||||||||||||||||||||||||||| ||| ||| |||| Sbjct: 16243685 aggattaatgcaaaaatgggtgaaggtcagttgggagagctgcct 16243641
>emb|BX672566.2|CNS09SC4 Oryza sativa chromosome 12, . Partial sequence from BAC B1004E12 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 24190 Score = 256 bits (129), Expect = 2e-64 Identities = 156/165 (94%) Strand = Plus / Minus Query: 518 atacatcaggtacctttggtcaggtgttggaatgttgggacaaggaacggaaagaaatgg 577 ||||||||||||||||||||||||| |||||||||||||| | |||| |||||||||||| Sbjct: 13404 atacatcaggtacctttggtcaggtattggaatgttgggatagggaaaggaaagaaatgg 13345 Query: 578 tggctattaagatcatcagaggcattaagaagtacagggatgctgcaatgatagaaattg 637 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13344 tggccattaagatcatcagaggcattaagaagtacagggatgctgcaatgatagaaattg 13285 Query: 638 gcatgctcgagcagcgttgtaaatatgaaaagagcagatccaggt 682 ||||||||||||||| | ||||||||||||| || |||||||||| Sbjct: 13284 gcatgctcgagcagcttggtaaatatgaaaaaagtagatccaggt 13240 Score = 172 bits (87), Expect = 3e-39 Identities = 159/183 (86%) Strand = Plus / Minus Query: 679 aggtttcatcccgttcaccaaaggagggatcctactacaaacgtgtgcccaagtccagtt 738 |||||||||||||||| |||||||| || ||||| | ||| | |||||||||||||| Sbjct: 12469 aggtttcatcccgttctccaaaggaaggttcctatttcaagcagctgcccaagtccagtg 12410 Query: 739 caataaaggttattgattttggcagcacaacatatgaccagcaggaccagacctatgtag 798 | || ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 12409 ctattaaggtgattgattttggcagcacaacatatgaccagcaggatcagacctatgtgg 12350 Query: 799 tttctactaggcattatcgggccccggaagttatcctgggtatctttcttgtccagtgca 858 | ||||||||||||||||| || || ||||||||| ||||||| | ||||| | |||||| Sbjct: 12349 tgtctactaggcattatcgagctccagaagttatcttgggtatttgtcttgcctagtgca 12290 Query: 859 aag 861 ||| Sbjct: 12289 aag 12287 Score = 145 bits (73), Expect = 6e-31 Identities = 127/145 (87%) Strand = Plus / Minus Query: 1046 tttttgagttaccagaggtactgcagggagaggcgctgtttcaaacccatgaaaatttgg 1105 |||||||||||| | || ||| ||||||||| || ||||||| ||||||||||| |||| Sbjct: 12106 tttttgagttacgaaagctaccgcagggagaagcattgtttcagacccatgaaaacttgg 12047 Query: 1106 agcatcttgctatgatggagagggtgctcgggccgttgccatatcacatgctcaaaaagg 1165 ||||||||||||||||||||||||| | || || ||||||| |||||||||||||| || Sbjct: 12046 agcatcttgctatgatggagagggtatttggtcctttgccatgtcacatgctcaaaaggg 11987 Query: 1166 ccgagtatgttgctgttcttgatcc 1190 | |||||||||||||| |||||||| Sbjct: 11986 cagagtatgttgctgtccttgatcc 11962 Score = 129 bits (65), Expect = 4e-26 Identities = 86/93 (92%) Strand = Plus / Minus Query: 1278 gagaaatatgtgagaaagggccgtttaaactggcctgaaggatgtgcttcacgggaaagc 1337 ||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||| ||| Sbjct: 11877 gagaaatatgtcagaaaaggccgtttaaactggcctgaaggttgtgcgtcacgggatagc 11818 Query: 1338 atgaaagctgttatgaagctgccccggcttcag 1370 ||||||||||||||||||||||| || |||||| Sbjct: 11817 atgaaagctgttatgaagctgccacgtcttcag 11785 Score = 103 bits (52), Expect = 2e-18 Identities = 70/76 (92%) Strand = Plus / Minus Query: 292 tcgttttgcgacccctcctctgagagaagatgacaaggatgggcactatgtttttgctgt 351 ||||||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||| Sbjct: 13734 tcgttttgcttcccctcctctgagagaagatgacaaggatggacactttgtctttgctgt 13675 Query: 352 gggagacaacctcaca 367 ||||||||||||||| Sbjct: 13674 tggagacaacctcaca 13659 Score = 93.7 bits (47), Expect = 2e-15 Identities = 68/75 (90%) Strand = Plus / Minus Query: 923 tgtttaggacttggatggagttacccatgtgatatctggagcgttggttgtatactagtt 982 |||| ||||||||||||||||||||| |||||||| ||||| |||||||||||||| ||| Sbjct: 12231 tgttcaggacttggatggagttacccctgtgatatatggagtgttggttgtatactggtt 12172 Query: 983 gaactctgcacggta 997 || || ||||||||| Sbjct: 12171 gagctatgcacggta 12157 Score = 89.7 bits (45), Expect = 3e-14 Identities = 83/95 (87%), Gaps = 3/95 (3%) Strand = Plus / Minus Query: 91 gatggagtgccttgccgagatgccgcacgcgccgct---cgaccgccgcccgcgcaagcg 147 |||||||||| | ||||||||||||| ||||||||| ||||||||||||||| ||| | Sbjct: 14575 gatggagtgcttggccgagatgccgcgcgcgccgctggccgaccgccgcccgcggaagag 14516 Query: 148 gcagcgccttggctgggatgtcggccccgagatcc 182 |||||| || || ||||| |||||||||||||||| Sbjct: 14515 gcagcggctggggtgggacgtcggccccgagatcc 14481 Score = 77.8 bits (39), Expect = 1e-10 Identities = 126/155 (81%) Strand = Plus / Minus Query: 1368 cagaatcttgtgatgcaaaacatagaacattctgctggggacttcatcaatcttctccaa 1427 |||||||| ||||||||||| |||| ||||||| || || ||||| | ||| | ||| Sbjct: 11706 cagaatctggtgatgcaaaatgtagatcattctgggggcgagttcattgaccttttgcaa 11647 Query: 1428 gggctgctgagctatgatccagcaagccgcctaacggcccaagaggcccttgagcatcca 1487 || ||| | || ||||||||||| ||||||||||| || |||||||| ||| ||||||| Sbjct: 11646 ggtctgttaaggtatgatccagctagccgcctaacagcacaagaggcgcttaggcatcca 11587 Query: 1488 ttcttgatggagcggagtgagcgacgaagatgacg 1522 ||||||| ||||| | |||||| |||||||||| Sbjct: 11586 ttcttgagggagcagtccgagcgaagaagatgacg 11552 Score = 65.9 bits (33), Expect = 5e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 377 aggattaatgcaaaaatgggtgaaggtcagttcggacagcagcct 421 |||||||||||||||||||||||||||||||| ||| ||| |||| Sbjct: 13540 aggattaatgcaaaaatgggtgaaggtcagttgggagagctgcct 13496
>dbj|AK061708.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F11, full insert sequence Length = 767 Score = 200 bits (101), Expect = 1e-47 Identities = 209/245 (85%) Strand = Plus / Plus Query: 1278 gagaaatatgtgagaaagggccgtttaaactggcctgaaggatgtgcttcacgggaaagc 1337 ||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||| ||| Sbjct: 327 gagaaatatgtcagaaaaggccgtttaaactggcctgaaggttgtgcgtcacgggatagc 386 Query: 1338 atgaaagctgttatgaagctgccccggcttcagaatcttgtgatgcaaaacatagaacat 1397 ||||||||||||||||||||||| || ||||||||||| ||||||||||| |||| ||| Sbjct: 387 atgaaagctgttatgaagctgccacgtcttcagaatctggtgatgcaaaatgtagatcat 446 Query: 1398 tctgctggggacttcatcaatcttctccaagggctgctgagctatgatccagcaagccgc 1457 |||| || || ||||| | ||| | ||||| ||| | || ||||||||||| |||||| Sbjct: 447 tctgggggcgagttcattgaccttttgcaaggtctgttaaggtatgatccagctagccgc 506 Query: 1458 ctaacggcccaagaggcccttgagcatccattcttgatggagcggagtgagcgacgaaga 1517 ||||| || |||||||| ||| |||||||||||||| ||||| | |||||| ||||| Sbjct: 507 ctaacagcacaagaggcgcttaggcatccattcttgagggagcagtccgagcgaagaaga 566 Query: 1518 tgacg 1522 ||||| Sbjct: 567 tgacg 571 Score = 145 bits (73), Expect = 6e-31 Identities = 133/153 (86%) Strand = Plus / Plus Query: 686 atcccgttcaccaaaggagggatcctactacaaacgtgtgcccaagtccagttcaataaa 745 ||||||||| |||||||| || ||||| | ||| | |||||||||||||| | || || Sbjct: 2 atcccgttctccaaaggaaggttcctatttcaagcagctgcccaagtccagtgctattaa 61 Query: 746 ggttattgattttggcagcacaacatatgaccagcaggaccagacctatgtagtttctac 805 ||| ||||||||||||||||||||||||||||||||||| ||||||||||| || ||||| Sbjct: 62 ggtgattgattttggcagcacaacatatgaccagcaggatcagacctatgtggtgtctac 121 Query: 806 taggcattatcgggccccggaagttatcctggg 838 |||||||||||| || || ||||||||| |||| Sbjct: 122 taggcattatcgagctccagaagttatcttggg 154 Score = 97.6 bits (49), Expect = 1e-16 Identities = 73/81 (90%) Strand = Plus / Plus Query: 1082 tgtttcaaacccatgaaaatttggagcatcttgctatgatggagagggtgctcgggccgt 1141 ||||||| ||||||||||| ||||||||||||||||||||||||||||| | || || | Sbjct: 229 tgtttcagacccatgaaaacttggagcatcttgctatgatggagagggtatttggtcctt 288 Query: 1142 tgccatatcacatgctcaaaa 1162 |||||| |||||||||||||| Sbjct: 289 tgccatgtcacatgctcaaaa 309 Score = 85.7 bits (43), Expect = 5e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 929 ggacttggatggagttacccatgtgatatctggagcgttggttgtatactagttgaactc 988 |||||||||||||||||||| |||||||| ||||| |||||||||||||| ||||| || Sbjct: 153 ggacttggatggagttacccctgtgatatatggagtgttggttgtatactggttgagcta 212 Query: 989 tgcacgg 995 ||||||| Sbjct: 213 tgcacgg 219
>emb|BX649219.2|CNS09SBY Oryza sativa chromosome 12, . BAC B1097F04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165955 Score = 172 bits (87), Expect = 3e-39 Identities = 159/183 (86%) Strand = Plus / Plus Query: 679 aggtttcatcccgttcaccaaaggagggatcctactacaaacgtgtgcccaagtccagtt 738 |||||||||||||||| |||||||| || ||||| | ||| | |||||||||||||| Sbjct: 729 aggtttcatcccgttctccaaaggaaggttcctatttcaagcagctgcccaagtccagtg 788 Query: 739 caataaaggttattgattttggcagcacaacatatgaccagcaggaccagacctatgtag 798 | || ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 789 ctattaaggtgattgattttggcagcacaacatatgaccagcaggatcagacctatgtgg 848 Query: 799 tttctactaggcattatcgggccccggaagttatcctgggtatctttcttgtccagtgca 858 | ||||||||||||||||| || || ||||||||| ||||||| | ||||| | |||||| Sbjct: 849 tgtctactaggcattatcgagctccagaagttatcttgggtatttgtcttgcctagtgca 908 Query: 859 aag 861 ||| Sbjct: 909 aag 911 Score = 145 bits (73), Expect = 6e-31 Identities = 127/145 (87%) Strand = Plus / Plus Query: 1046 tttttgagttaccagaggtactgcagggagaggcgctgtttcaaacccatgaaaatttgg 1105 |||||||||||| | || ||| ||||||||| || ||||||| ||||||||||| |||| Sbjct: 1092 tttttgagttacgaaagctaccgcagggagaagcattgtttcagacccatgaaaacttgg 1151 Query: 1106 agcatcttgctatgatggagagggtgctcgggccgttgccatatcacatgctcaaaaagg 1165 ||||||||||||||||||||||||| | || || ||||||| |||||||||||||| || Sbjct: 1152 agcatcttgctatgatggagagggtatttggtcctttgccatgtcacatgctcaaaaggg 1211 Query: 1166 ccgagtatgttgctgttcttgatcc 1190 | |||||||||||||| |||||||| Sbjct: 1212 cagagtatgttgctgtccttgatcc 1236 Score = 129 bits (65), Expect = 4e-26 Identities = 86/93 (92%) Strand = Plus / Plus Query: 1278 gagaaatatgtgagaaagggccgtttaaactggcctgaaggatgtgcttcacgggaaagc 1337 ||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||| ||| Sbjct: 1321 gagaaatatgtcagaaaaggccgtttaaactggcctgaaggttgtgcgtcacgggatagc 1380 Query: 1338 atgaaagctgttatgaagctgccccggcttcag 1370 ||||||||||||||||||||||| || |||||| Sbjct: 1381 atgaaagctgttatgaagctgccacgtcttcag 1413 Score = 93.7 bits (47), Expect = 2e-15 Identities = 68/75 (90%) Strand = Plus / Plus Query: 923 tgtttaggacttggatggagttacccatgtgatatctggagcgttggttgtatactagtt 982 |||| ||||||||||||||||||||| |||||||| ||||| |||||||||||||| ||| Sbjct: 967 tgttcaggacttggatggagttacccctgtgatatatggagtgttggttgtatactggtt 1026 Query: 983 gaactctgcacggta 997 || || ||||||||| Sbjct: 1027 gagctatgcacggta 1041 Score = 77.8 bits (39), Expect = 1e-10 Identities = 126/155 (81%) Strand = Plus / Plus Query: 1368 cagaatcttgtgatgcaaaacatagaacattctgctggggacttcatcaatcttctccaa 1427 |||||||| ||||||||||| |||| ||||||| || || ||||| | ||| | ||| Sbjct: 1492 cagaatctggtgatgcaaaatgtagatcattctgggggcgagttcattgaccttttgcaa 1551 Query: 1428 gggctgctgagctatgatccagcaagccgcctaacggcccaagaggcccttgagcatcca 1487 || ||| | || ||||||||||| ||||||||||| || |||||||| ||| ||||||| Sbjct: 1552 ggtctgttaaggtatgatccagctagccgcctaacagcacaagaggcgcttaggcatcca 1611 Query: 1488 ttcttgatggagcggagtgagcgacgaagatgacg 1522 ||||||| ||||| | |||||| |||||||||| Sbjct: 1612 ttcttgagggagcagtccgagcgaagaagatgacg 1646
>gb|BT019030.1| Zea mays clone Contig539.F mRNA sequence Length = 1334 Score = 93.7 bits (47), Expect = 2e-15 Identities = 128/155 (82%) Strand = Plus / Plus Query: 684 tcatcccgttcaccaaaggagggatcctactacaaacgtgtgcccaagtccagttcaata 743 |||||||| || ||||||||||||||||| ||||| || ||||||||||| ||| | || Sbjct: 543 tcatcccgatccccaaaggagggatcctattacaagcgggtgcccaagtctagtgctatc 602 Query: 744 aaggttattgattttggcagcacaacatatgaccagcaggaccagacctatgtagtttct 803 ||||| ||||||||||| ||||| || ||||| || || || |||| ||||| || || Sbjct: 603 aaggtgattgattttggtagcactacctatgatcaacatgatcagagttatgttgtgtcg 662 Query: 804 actaggcattatcgggccccggaagttatcctggg 838 || ||||||||||| || || |||||||| ||||| Sbjct: 663 acgaggcattatcgagctccagaagttatactggg 697 Score = 85.7 bits (43), Expect = 5e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 929 ggacttggatggagttacccatgtgatatctggagcgttggttgtatactagttgaactc 988 ||||||||| ||||||||||||||||||||||||| ||||||||||| || ||||| || Sbjct: 696 ggacttggagggagttacccatgtgatatctggagtgttggttgtattcttgttgagctt 755 Query: 989 tgcacgg 995 ||||||| Sbjct: 756 tgcacgg 762 Score = 63.9 bits (32), Expect = 2e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 1332 gaaagcatgaaagctgttatgaagctgccccggcttcagaatcttgtgatgcaaaa 1387 ||||||||||||||||| ||||| || || ||||||||||||| ||||||||||| Sbjct: 924 gaaagcatgaaagctgtgatgaaattgtccaggcttcagaatctggtgatgcaaaa 979 Score = 46.1 bits (23), Expect = 0.44 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1096 gaaaatttggagcatcttgctatgatggagagggt 1130 ||||| ||||| ||||| ||||||||||||||||| Sbjct: 786 gaaaacttggaacatctggctatgatggagagggt 820
>gb|AY109522.1| Zea mays CL31185_1 mRNA sequence Length = 1158 Score = 85.7 bits (43), Expect = 5e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 929 ggacttggatggagttacccatgtgatatctggagcgttggttgtatactagttgaactc 988 |||| |||||||||||||||||||||||||||||| ||||||||||| || ||||| || Sbjct: 700 ggacatggatggagttacccatgtgatatctggagtgttggttgtattcttgttgagctt 641 Query: 989 tgcacgg 995 ||||||| Sbjct: 640 tgcacgg 634 Score = 61.9 bits (31), Expect = 7e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 1329 cgggaaagcatgaaagctgttatgaagctgccccggcttcagaatcttgtgatgcaaaa 1387 ||||| |||||||||||||| ||||| || || ||||||||||||| ||||||||||| Sbjct: 392 cgggagagcatgaaagctgtgatgaaattgtccaggcttcagaatctggtgatgcaaaa 334 Score = 50.1 bits (25), Expect = 0.028 Identities = 109/137 (79%) Strand = Plus / Minus Query: 696 ccaaaggagggatcctactacaaacgtgtgcccaagtccagttcaataaaggttattgat 755 ||||||||||| ||||| ||||| | |||||||||| ||| | || ||||| |||||| Sbjct: 841 ccaaaggaggggtcctattacaagcagttgcccaagtctagtgctatcaaggtgattgat 782 Query: 756 tttggcagcacaacatatgaccagcaggaccagacctatgtagtttctactaggcattat 815 || || ||||| || ||||| || || || |||| ||||| || || || ||||| ||| Sbjct: 781 ttcggtagcactacttatgatcaacatgatcagagttatgtggtatcgacgaggcactat 722 Query: 816 cgggccccggaagttat 832 ||||| || |||||||| Sbjct: 721 cgggctccagaagttat 705 Score = 42.1 bits (21), Expect = 6.9 Identities = 66/81 (81%) Strand = Plus / Minus Query: 1096 gaaaatttggagcatcttgctatgatggagagggtgctcgggccgttgccatatcacatg 1155 ||||| ||||| ||||| |||||||||||||| || || || || ||||| || || ||| Sbjct: 610 gaaaacttggaacatctggctatgatggagagagttcttggacctttgccgtaccatatg 551 Query: 1156 ctcaaaaaggccgagtatgtt 1176 || || | ||| ||||||||| Sbjct: 550 cttaagagggcagagtatgtt 530
>emb|CT830841.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN030I20, full insert sequence Length = 1618 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1084 tttcaaacccatgaaaatttggagcatcttgctatgatggagag 1127 |||||||| |||||||||||||||||| | |||||||||||||| Sbjct: 1155 tttcaaacacatgaaaatttggagcatttggctatgatggagag 1198 Score = 46.1 bits (23), Expect = 0.44 Identities = 26/27 (96%) Strand = Plus / Plus Query: 319 agatgacaaggatgggcactatgtttt 345 ||||||||||||||| ||||||||||| Sbjct: 428 agatgacaaggatggacactatgtttt 454 Score = 44.1 bits (22), Expect = 1.7 Identities = 70/86 (81%) Strand = Plus / Plus Query: 750 attgattttggcagcacaacatatgaccagcaggaccagacctatgtagtttctactagg 809 ||||||||||| || ||||||| || || || ||||| | ||||| || || || ||| Sbjct: 990 attgattttggaagtacaacattcgaacaccaagaccacaattatgtggtatcaacaagg 1049 Query: 810 cattatcgggccccggaagttatcct 835 |||||||| ||||| ||||||||||| Sbjct: 1050 cattatcgtgcccctgaagttatcct 1075
>ref|NM_001051277.1| Oryza sativa (japonica cultivar-group) Os01g0837900 (Os01g0837900) mRNA, complete cds Length = 1703 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1084 tttcaaacccatgaaaatttggagcatcttgctatgatggagag 1127 |||||||| |||||||||||||||||| | |||||||||||||| Sbjct: 1156 tttcaaacacatgaaaatttggagcatttggctatgatggagag 1199 Score = 46.1 bits (23), Expect = 0.44 Identities = 26/27 (96%) Strand = Plus / Plus Query: 319 agatgacaaggatgggcactatgtttt 345 ||||||||||||||| ||||||||||| Sbjct: 429 agatgacaaggatggacactatgtttt 455 Score = 44.1 bits (22), Expect = 1.7 Identities = 70/86 (81%) Strand = Plus / Plus Query: 750 attgattttggcagcacaacatatgaccagcaggaccagacctatgtagtttctactagg 809 ||||||||||| || ||||||| || || || ||||| | ||||| || || || ||| Sbjct: 991 attgattttggaagtacaacattcgaacaccaagaccacaattatgtggtatcaacaagg 1050 Query: 810 cattatcgggccccggaagttatcct 835 |||||||| ||||| ||||||||||| Sbjct: 1051 cattatcgtgcccctgaagttatcct 1076
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1084 tttcaaacccatgaaaatttggagcatcttgctatgatggagag 1127 |||||||| |||||||||||||||||| | |||||||||||||| Sbjct: 35919562 tttcaaacacatgaaaatttggagcatttggctatgatggagag 35919519 Score = 48.1 bits (24), Expect = 0.11 Identities = 75/92 (81%) Strand = Plus / Minus Query: 750 attgattttggcagcacaacatatgaccagcaggaccagacctatgtagtttctactagg 809 ||||||||||| || ||||||| || || || ||||| | ||||| || || || ||| Sbjct: 35919964 attgattttggaagtacaacattcgaacaccaagaccacaattatgtggtatcaacaagg 35919905 Query: 810 cattatcgggccccggaagttatcctgggtat 841 |||||||| ||||| ||||||||||| ||||| Sbjct: 35919904 cattatcgtgcccctgaagttatccttggtat 35919873 Score = 46.1 bits (23), Expect = 0.44 Identities = 23/23 (100%) Strand = Plus / Plus Query: 607 aagtacagggatgctgcaatgat 629 ||||||||||||||||||||||| Sbjct: 23087822 aagtacagggatgctgcaatgat 23087844 Score = 46.1 bits (23), Expect = 0.44 Identities = 26/27 (96%) Strand = Plus / Minus Query: 319 agatgacaaggatgggcactatgtttt 345 ||||||||||||||| ||||||||||| Sbjct: 35921585 agatgacaaggatggacactatgtttt 35921559
>dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D11 Length = 138108 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1084 tttcaaacccatgaaaatttggagcatcttgctatgatggagag 1127 |||||||| |||||||||||||||||| | |||||||||||||| Sbjct: 18240 tttcaaacacatgaaaatttggagcatttggctatgatggagag 18197 Score = 48.1 bits (24), Expect = 0.11 Identities = 75/92 (81%) Strand = Plus / Minus Query: 750 attgattttggcagcacaacatatgaccagcaggaccagacctatgtagtttctactagg 809 ||||||||||| || ||||||| || || || ||||| | ||||| || || || ||| Sbjct: 18642 attgattttggaagtacaacattcgaacaccaagaccacaattatgtggtatcaacaagg 18583 Query: 810 cattatcgggccccggaagttatcctgggtat 841 |||||||| ||||| ||||||||||| ||||| Sbjct: 18582 cattatcgtgcccctgaagttatccttggtat 18551 Score = 46.1 bits (23), Expect = 0.44 Identities = 26/27 (96%) Strand = Plus / Minus Query: 319 agatgacaaggatgggcactatgtttt 345 ||||||||||||||| ||||||||||| Sbjct: 20263 agatgacaaggatggacactatgtttt 20237
>dbj|AK103207.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122I09, full insert sequence Length = 1704 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1084 tttcaaacccatgaaaatttggagcatcttgctatgatggagag 1127 |||||||| |||||||||||||||||| | |||||||||||||| Sbjct: 1157 tttcaaacacatgaaaatttggagcatttggctatgatggagag 1200 Score = 46.1 bits (23), Expect = 0.44 Identities = 26/27 (96%) Strand = Plus / Plus Query: 319 agatgacaaggatgggcactatgtttt 345 ||||||||||||||| ||||||||||| Sbjct: 430 agatgacaaggatggacactatgtttt 456
>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12 Length = 144628 Score = 56.0 bits (28), Expect = 5e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 1067 tgcagggagaggcgctgtttcaaacccatgaaaatttggagcatcttgctatgatggaga 1126 |||||||||||||||| || ||||| |||||||| ||||| ||| | || |||||||| | Sbjct: 102704 tgcagggagaggcgcttttccaaacgcatgaaaacttggaacatttggccatgatggaaa 102645 Query: 1127 gggt 1130 |||| Sbjct: 102644 gggt 102641
>dbj|AK227055.1| Arabidopsis thaliana mRNA for protein kinase, complete cds, clone: RAFL09-60-J23 Length = 1485 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 739 caataaaggttattgattttggcagcacaacatatgaccagcaggaccagaccta 793 |||||||||| ||||||||||| |||||||| ||||| | |||||||| ||||| Sbjct: 867 caataaaggtgattgattttggtagcacaacttatgagcgccaggaccaaaccta 921 Score = 46.1 bits (23), Expect = 0.44 Identities = 44/51 (86%) Strand = Plus / Plus Query: 925 tttaggacttggatggagttacccatgtgatatctggagcgttggttgtat 975 |||||| ||||| |||||||| || |||||| | ||||||||||| ||||| Sbjct: 961 tttaggtcttggctggagttatccgtgtgatgtttggagcgttggatgtat 1011 Score = 42.1 bits (21), Expect = 6.9 Identities = 48/57 (84%) Strand = Plus / Plus Query: 525 aggtacctttggtcaggtgttggaatgttgggacaaggaacggaaagaaatggtggc 581 |||||| |||||||| ||| | ||||||||||| | ||| |||| ||||||||||| Sbjct: 403 aggtacttttggtcaagtgctagaatgttgggatagggagaggaaggaaatggtggc 459
>gb|BT025991.1| Arabidopsis thaliana At4g24740 mRNA, complete cds Length = 1284 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 739 caataaaggttattgattttggcagcacaacatatgaccagcaggaccagaccta 793 |||||||||| ||||||||||| |||||||| ||||| | |||||||| ||||| Sbjct: 782 caataaaggtgattgattttggtagcacaacttatgagcgccaggaccaaaccta 836 Score = 46.1 bits (23), Expect = 0.44 Identities = 44/51 (86%) Strand = Plus / Plus Query: 925 tttaggacttggatggagttacccatgtgatatctggagcgttggttgtat 975 |||||| ||||| |||||||| || |||||| | ||||||||||| ||||| Sbjct: 876 tttaggtcttggctggagttatccgtgtgatgtttggagcgttggatgtat 926 Score = 42.1 bits (21), Expect = 6.9 Identities = 48/57 (84%) Strand = Plus / Plus Query: 525 aggtacctttggtcaggtgttggaatgttgggacaaggaacggaaagaaatggtggc 581 |||||| |||||||| ||| | ||||||||||| | ||| |||| ||||||||||| Sbjct: 318 aggtacttttggtcaagtgctagaatgttgggatagggagaggaaggaaatggtggc 374
>ref|NM_202881.1| Arabidopsis thaliana AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); kinase (AFC2) mRNA, complete cds Length = 1426 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 739 caataaaggttattgattttggcagcacaacatatgaccagcaggaccagaccta 793 |||||||||| ||||||||||| |||||||| ||||| | |||||||| ||||| Sbjct: 725 caataaaggtgattgattttggtagcacaacttatgagcgccaggaccaaaccta 779 Score = 46.1 bits (23), Expect = 0.44 Identities = 44/51 (86%) Strand = Plus / Plus Query: 925 tttaggacttggatggagttacccatgtgatatctggagcgttggttgtat 975 |||||| ||||| |||||||| || |||||| | ||||||||||| ||||| Sbjct: 819 tttaggtcttggctggagttatccgtgtgatgtttggagcgttggatgtat 869 Score = 42.1 bits (21), Expect = 6.9 Identities = 48/57 (84%) Strand = Plus / Plus Query: 525 aggtacctttggtcaggtgttggaatgttgggacaaggaacggaaagaaatggtggc 581 |||||| |||||||| ||| | ||||||||||| | ||| |||| ||||||||||| Sbjct: 261 aggtacttttggtcaagtgctagaatgttgggatagggagaggaaggaaatggtggc 317
>ref|NM_118607.2| Arabidopsis thaliana AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); kinase (AFC2) mRNA, complete cds Length = 1604 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 739 caataaaggttattgattttggcagcacaacatatgaccagcaggaccagaccta 793 |||||||||| ||||||||||| |||||||| ||||| | |||||||| ||||| Sbjct: 902 caataaaggtgattgattttggtagcacaacttatgagcgccaggaccaaaccta 956 Score = 46.1 bits (23), Expect = 0.44 Identities = 44/51 (86%) Strand = Plus / Plus Query: 925 tttaggacttggatggagttacccatgtgatatctggagcgttggttgtat 975 |||||| ||||| |||||||| || |||||| | ||||||||||| ||||| Sbjct: 996 tttaggtcttggctggagttatccgtgtgatgtttggagcgttggatgtat 1046 Score = 42.1 bits (21), Expect = 6.9 Identities = 48/57 (84%) Strand = Plus / Plus Query: 525 aggtacctttggtcaggtgttggaatgttgggacaaggaacggaaagaaatggtggc 581 |||||| |||||||| ||| | ||||||||||| | ||| |||| ||||||||||| Sbjct: 438 aggtacttttggtcaagtgctagaatgttgggatagggagaggaaggaaatggtggc 494
>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62 Length = 197070 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Minus Query: 739 caataaaggttattgattttggcagcacaacatatgaccagcaggaccagaccta 793 |||||||||| ||||||||||| |||||||| ||||| | |||||||| ||||| Sbjct: 29859 caataaaggtgattgattttggtagcacaacttatgagcgccaggaccaaaccta 29805 Score = 42.1 bits (21), Expect = 6.9 Identities = 48/57 (84%) Strand = Plus / Minus Query: 525 aggtacctttggtcaggtgttggaatgttgggacaaggaacggaaagaaatggtggc 581 |||||| |||||||| ||| | ||||||||||| | ||| |||| ||||||||||| Sbjct: 30764 aggtacttttggtcaagtgctagaatgttgggatagggagaggaaggaaatggtggc 30708
>emb|AL035356.1|ATF22K18 Arabidopsis thaliana DNA chromosome 4, BAC clone F22K18 (ESSAII project) Length = 125803 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 739 caataaaggttattgattttggcagcacaacatatgaccagcaggaccagaccta 793 |||||||||| ||||||||||| |||||||| ||||| | |||||||| ||||| Sbjct: 25649 caataaaggtgattgattttggtagcacaacttatgagcgccaggaccaaaccta 25703 Score = 42.1 bits (21), Expect = 6.9 Identities = 48/57 (84%) Strand = Plus / Plus Query: 525 aggtacctttggtcaggtgttggaatgttgggacaaggaacggaaagaaatggtggc 581 |||||| |||||||| ||| | ||||||||||| | ||| |||| ||||||||||| Sbjct: 24744 aggtacttttggtcaagtgctagaatgttgggatagggagaggaaggaaatggtggc 24800
>emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC clone F6I7 (ESSA project) Length = 95185 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Minus Query: 739 caataaaggttattgattttggcagcacaacatatgaccagcaggaccagaccta 793 |||||||||| ||||||||||| |||||||| ||||| | |||||||| ||||| Sbjct: 436 caataaaggtgattgattttggtagcacaacttatgagcgccaggaccaaaccta 382 Score = 42.1 bits (21), Expect = 6.9 Identities = 48/57 (84%) Strand = Plus / Minus Query: 525 aggtacctttggtcaggtgttggaatgttgggacaaggaacggaaagaaatggtggc 581 |||||| |||||||| ||| | ||||||||||| | ||| |||| ||||||||||| Sbjct: 1341 aggtacttttggtcaagtgctagaatgttgggatagggagaggaaggaaatggtggc 1285
>emb|BX827973.1|CNS0A3VC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH40ZG01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1319 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 739 caataaaggttattgattttggcagcacaacatatgaccagcaggaccagaccta 793 |||||||||| ||||||||||| |||||||| ||||| | |||||||| ||||| Sbjct: 651 caataaaggtgattgattttggtagcacaacttatgagcgccaggaccaaaccta 705 Score = 46.1 bits (23), Expect = 0.44 Identities = 44/51 (86%) Strand = Plus / Plus Query: 925 tttaggacttggatggagttacccatgtgatatctggagcgttggttgtat 975 |||||| ||||| |||||||| || |||||| | ||||||||||| ||||| Sbjct: 745 tttaggtcttggctggagttatccgtgtgatgtttggagcgttggatgtat 795 Score = 42.1 bits (21), Expect = 6.9 Identities = 48/57 (84%) Strand = Plus / Plus Query: 525 aggtacctttggtcaggtgttggaatgttgggacaaggaacggaaagaaatggtggc 581 |||||| |||||||| ||| | ||||||||||| | ||| |||| ||||||||||| Sbjct: 187 aggtacttttggtcaagtgctagaatgttgggatagggagaggaaggaaatggtggc 243
>emb|BX828115.1|CNS0A2EM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH54ZA09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1392 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 739 caataaaggttattgattttggcagcacaacatatgaccagcaggaccagaccta 793 |||||||||| ||||||||||| |||||||| ||||| | |||||||| ||||| Sbjct: 725 caataaaggtgattgattttggtagcacaacttatgagcgccaggaccaaaccta 779 Score = 46.1 bits (23), Expect = 0.44 Identities = 44/51 (86%) Strand = Plus / Plus Query: 925 tttaggacttggatggagttacccatgtgatatctggagcgttggttgtat 975 |||||| ||||| |||||||| || |||||| | ||||||||||| ||||| Sbjct: 819 tttaggtcttggctggagttatccgtgtgatgtttggagcgttggatgtat 869 Score = 42.1 bits (21), Expect = 6.9 Identities = 48/57 (84%) Strand = Plus / Plus Query: 525 aggtacctttggtcaggtgttggaatgttgggacaaggaacggaaagaaatggtggc 581 |||||| |||||||| ||| | ||||||||||| | ||| |||| ||||||||||| Sbjct: 261 aggtacttttggtcaagtgctagaatgttgggatagggagaggaaggaaatggtggc 317
>gb|AY109648.1| Zea mays CL57146_1 mRNA sequence Length = 1151 Score = 54.0 bits (27), Expect = 0.002 Identities = 39/43 (90%) Strand = Plus / Plus Query: 1084 tttcaaacccatgaaaatttggagcatcttgctatgatggaga 1126 |||||||| |||||||| ||||||||| | ||||||||||||| Sbjct: 580 tttcaaacacatgaaaacttggagcatttggctatgatggaga 622
>gb|U16177.1|ATU16177 Arabidopsis thaliana protein kinase (AFC2) mRNA, complete cds Length = 1519 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 739 caataaaggttattgattttggcagcacaacatatgaccagcaggaccagaccta 793 |||||||||| ||||||||||| |||||||| ||||| | |||||||| ||||| Sbjct: 825 caataaaggtgattgattttggtagcacaacttatgagcgccaggaccaaaccta 879 Score = 46.1 bits (23), Expect = 0.44 Identities = 44/51 (86%) Strand = Plus / Plus Query: 925 tttaggacttggatggagttacccatgtgatatctggagcgttggttgtat 975 |||||| ||||| |||||||| || |||||| | ||||||||||| ||||| Sbjct: 919 tttaggtcttggctggagttatccgtgtgatgtttggagcgttggatgtat 969 Score = 42.1 bits (21), Expect = 6.9 Identities = 48/57 (84%) Strand = Plus / Plus Query: 525 aggtacctttggtcaggtgttggaatgttgggacaaggaacggaaagaaatggtggc 581 |||||| |||||||| ||| | ||||||||||| | ||| |||| ||||||||||| Sbjct: 361 aggtacttttggtcaagtgctagaatgttgggatagggagaggaaggaaatggtggc 417
>dbj|D45353.1|ATHPKAME1A Arabidopsis thaliana AME1 mRNA for protein kinase, complete cds Length = 1604 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 739 caataaaggttattgattttggcagcacaacatatgaccagcaggaccagaccta 793 |||||||||| ||||||||||| |||||||| ||||| | |||||||| ||||| Sbjct: 902 caataaaggtgattgattttggtagcacaacttatgagcgccaggaccaaaccta 956 Score = 46.1 bits (23), Expect = 0.44 Identities = 44/51 (86%) Strand = Plus / Plus Query: 925 tttaggacttggatggagttacccatgtgatatctggagcgttggttgtat 975 |||||| ||||| |||||||| || |||||| | ||||||||||| ||||| Sbjct: 996 tttaggtcttggctggagttatccgtgtgatgtttggagcgttggatgtat 1046 Score = 42.1 bits (21), Expect = 6.9 Identities = 48/57 (84%) Strand = Plus / Plus Query: 525 aggtacctttggtcaggtgttggaatgttgggacaaggaacggaaagaaatggtggc 581 |||||| |||||||| ||| | ||||||||||| | ||| |||| ||||||||||| Sbjct: 438 aggtacttttggtcaagtgctagaatgttgggatagggagaggaaggaaatggtggc 494
>emb|CT573420.5| M.truncatula DNA sequence from clone MTH2-17L3 on chromosome 3, complete sequence Length = 126234 Score = 52.0 bits (26), Expect = 0.007 Identities = 53/62 (85%) Strand = Plus / Plus Query: 1069 cagggagaggcgctgtttcaaacccatgaaaatttggagcatcttgctatgatggagagg 1128 |||||||| || || ||||| || ||||| ||||| |||||||| || |||||||||||| Sbjct: 18428 cagggagaagctctatttcagacacatgagaatttagagcatctagccatgatggagagg 18487 Query: 1129 gt 1130 || Sbjct: 18488 gt 18489
>emb|CR956430.2| M.truncatula DNA sequence from clone MTH2-49I19 on chromosome 3, complete sequence Length = 97738 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Minus Query: 1082 tgtttcaaacccatgaaaatttggagcatcttgctatgatggagag 1127 ||||||| || ||||||||||||||||| || || ||||||||||| Sbjct: 2504 tgtttcagactcatgaaaatttggagcacctggcaatgatggagag 2459
>gb|AC135413.43| Medicago truncatula clone mth2-16n19, complete sequence Length = 92216 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1082 tgtttcaaacccatgaaaatttggagcatcttgctatgatggagag 1127 ||||||| || ||||||||||||||||| || || ||||||||||| Sbjct: 34031 tgtttcagactcatgaaaatttggagcacctggcaatgatggagag 34076
>ref|NM_180364.2| Arabidopsis thaliana AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-ty> (AFC1) mRNA, complete cds Length = 1887 Score = 48.1 bits (24), Expect = 0.11 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1071 gggagaggcgctgtttcaaacccatgaaaatttggagcatcttgctatgatggagagggt 1130 |||||||||||| || ||||| |||||||| ||||| ||| | || |||||||| ||||| Sbjct: 1376 gggagaggcgcttttccaaacgcatgaaaacttggaacatttggccatgatggaaagggt 1435
>ref|NM_202696.1| Arabidopsis thaliana AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-ty> (AFC1) mRNA, complete cds Length = 1659 Score = 48.1 bits (24), Expect = 0.11 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1071 gggagaggcgctgtttcaaacccatgaaaatttggagcatcttgctatgatggagagggt 1130 |||||||||||| || ||||| |||||||| ||||| ||| | || |||||||| ||||| Sbjct: 1148 gggagaggcgcttttccaaacgcatgaaaacttggaacatttggccatgatggaaagggt 1207
>ref|NM_115217.1| Arabidopsis thaliana AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-ty> (AFC1) mRNA, complete cds Length = 1732 Score = 48.1 bits (24), Expect = 0.11 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1071 gggagaggcgctgtttcaaacccatgaaaatttggagcatcttgctatgatggagagggt 1130 |||||||||||| || ||||| |||||||| ||||| ||| | || |||||||| ||||| Sbjct: 1174 gggagaggcgcttttccaaacgcatgaaaacttggaacatttggccatgatggaaagggt 1233
>ref|NM_001035776.1| Arabidopsis thaliana AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-ty> (AFC1) mRNA, complete cds Length = 1847 Score = 48.1 bits (24), Expect = 0.11 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1071 gggagaggcgctgtttcaaacccatgaaaatttggagcatcttgctatgatggagagggt 1130 |||||||||||| || ||||| |||||||| ||||| ||| | || |||||||| ||||| Sbjct: 1175 gggagaggcgcttttccaaacgcatgaaaacttggaacatttggccatgatggaaagggt 1234
>gb|AY034936.2| Arabidopsis thaliana At3g53570 mRNA sequence Length = 1558 Score = 48.1 bits (24), Expect = 0.11 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1071 gggagaggcgctgtttcaaacccatgaaaatttggagcatcttgctatgatggagagggt 1130 |||||||||||| || ||||| |||||||| ||||| ||| | || |||||||| ||||| Sbjct: 1151 gggagaggcgcttttccaaacgcatgaaaacttggaacatttggccatgatggaaagggt 1210
>emb|BX822243.1|CNS0A7TI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB22ZD07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1887 Score = 48.1 bits (24), Expect = 0.11 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1071 gggagaggcgctgtttcaaacccatgaaaatttggagcatcttgctatgatggagagggt 1130 |||||||||||| || ||||| |||||||| ||||| ||| | || |||||||| ||||| Sbjct: 1376 gggagaggcgcttttccaaacgcatgaaaacttggaacatttggccatgatggaaagggt 1435
>gb|AY111089.1| Zea mays CL31185_3 mRNA sequence Length = 574 Score = 48.1 bits (24), Expect = 0.11 Identities = 48/56 (85%) Strand = Plus / Minus Query: 1332 gaaagcatgaaagctgttatgaagctgccccggcttcagaatcttgtgatgcaaaa 1387 |||||||||||| |||| ||||| || || |||||||||| || ||||||||||| Sbjct: 423 gaaagcatgaaaactgtgatgaaattgtccaggcttcagaacctggtgatgcaaaa 368
>gb|U16176.1|ATU16176 Arabidopsis thaliana protein kinase (AFC1) mRNA, complete cds Length = 1732 Score = 48.1 bits (24), Expect = 0.11 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1071 gggagaggcgctgtttcaaacccatgaaaatttggagcatcttgctatgatggagagggt 1130 |||||||||||| || ||||| |||||||| ||||| ||| | || |||||||| ||||| Sbjct: 1174 gggagaggcgcttttccaaacgcatgaaaacttggaacatttggccatgatggaaagggt 1233
>dbj|D45354.1|ATHPKAME2B Arabidopsis thaliana AME2 mRNA for protein kinase, complete cds Length = 1716 Score = 48.1 bits (24), Expect = 0.11 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1071 gggagaggcgctgtttcaaacccatgaaaatttggagcatcttgctatgatggagagggt 1130 |||||||||||| || ||||| |||||||| ||||| ||| | || |||||||| ||||| Sbjct: 1154 gggagaggcgcttttccaaacgcatgaaaacttggaacatttggccatgatggaaagggt 1213
>ref|NM_001049987.1| Oryza sativa (japonica cultivar-group) Os01g0590900 (Os01g0590900) mRNA, partial cds Length = 1568 Score = 46.1 bits (23), Expect = 0.44 Identities = 23/23 (100%) Strand = Plus / Plus Query: 607 aagtacagggatgctgcaatgat 629 ||||||||||||||||||||||| Sbjct: 349 aagtacagggatgctgcaatgat 371
>dbj|AK229243.1| Arabidopsis thaliana mRNA for protein kinase, complete cds, clone: RAFL16-53-B11 Length = 1687 Score = 46.1 bits (23), Expect = 0.44 Identities = 59/71 (83%) Strand = Plus / Plus Query: 925 tttaggacttggatggagttacccatgtgatatctggagcgttggttgtatactagttga 984 |||||| || ||||||||||||| ||||| | ||||| | |||||||||||| |||| Sbjct: 1060 tttaggtctaggatggagttaccagtgtgacttatggagtataggttgtatactatttga 1119 Query: 985 actctgcacgg 995 ||| ||||||| Sbjct: 1120 actatgcacgg 1130
>ref|NM_001036697.1| Arabidopsis thaliana AME3; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase (AME3) mRNA, complete cds Length = 1552 Score = 46.1 bits (23), Expect = 0.44 Identities = 59/71 (83%) Strand = Plus / Plus Query: 925 tttaggacttggatggagttacccatgtgatatctggagcgttggttgtatactagttga 984 |||||| || ||||||||||||| ||||| | ||||| | |||||||||||| |||| Sbjct: 934 tttaggtctaggatggagttaccagtgtgacttatggagtataggttgtatactatttga 993 Query: 985 actctgcacgg 995 ||| ||||||| Sbjct: 994 actatgcacgg 1004
>ref|NM_202937.1| Arabidopsis thaliana AME3; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase (AME3) mRNA, complete cds Length = 1698 Score = 46.1 bits (23), Expect = 0.44 Identities = 59/71 (83%) Strand = Plus / Plus Query: 925 tttaggacttggatggagttacccatgtgatatctggagcgttggttgtatactagttga 984 |||||| || ||||||||||||| ||||| | ||||| | |||||||||||| |||| Sbjct: 1060 tttaggtctaggatggagttaccagtgtgacttatggagtataggttgtatactatttga 1119 Query: 985 actctgcacgg 995 ||| ||||||| Sbjct: 1120 actatgcacgg 1130
>ref|NM_119418.2| Arabidopsis thaliana AME3; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase (AME3) mRNA, complete cds Length = 1678 Score = 46.1 bits (23), Expect = 0.44 Identities = 59/71 (83%) Strand = Plus / Plus Query: 925 tttaggacttggatggagttacccatgtgatatctggagcgttggttgtatactagttga 984 |||||| || ||||||||||||| ||||| | ||||| | |||||||||||| |||| Sbjct: 1060 tttaggtctaggatggagttaccagtgtgacttatggagtataggttgtatactatttga 1119 Query: 985 actctgcacgg 995 ||| ||||||| Sbjct: 1120 actatgcacgg 1130
>ref|XM_635775.1| Dictyostelium discoideum AX4 putative protein serine/threonine kinase (clkA) mRNA, complete cds Length = 2799 Score = 46.1 bits (23), Expect = 0.44 Identities = 35/39 (89%) Strand = Plus / Plus Query: 938 tggagttacccatgtgatatctggagcgttggttgtata 976 |||||||| ||||||||||| ||| | |||||||||||| Sbjct: 2401 tggagttatccatgtgatatttggggtgttggttgtata 2439
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 46.1 bits (23), Expect = 0.44 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1412 catcaatcttctccaagggctgc 1434 ||||||||||||||||||||||| Sbjct: 1111663 catcaatcttctccaagggctgc 1111641
>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77 Length = 197252 Score = 46.1 bits (23), Expect = 0.44 Identities = 53/63 (84%) Strand = Plus / Plus Query: 935 ggatggagttacccatgtgatatctggagcgttggttgtatactagttgaactctgcacg 994 ||||||||||||| ||||| | ||||| | |||||||||||| ||||||| |||||| Sbjct: 172430 ggatggagttaccagtgtgacttatggagtataggttgtatactatttgaactatgcacg 172489 Query: 995 gta 997 ||| Sbjct: 172490 gta 172492
>emb|AL022537.1|ATF4D11 Arabidopsis thaliana DNA chromosome 4, BAC clone F4D11 (ESSAII project) Length = 101715 Score = 46.1 bits (23), Expect = 0.44 Identities = 53/63 (84%) Strand = Plus / Minus Query: 935 ggatggagttacccatgtgatatctggagcgttggttgtatactagttgaactctgcacg 994 ||||||||||||| ||||| | ||||| | |||||||||||| ||||||| |||||| Sbjct: 58641 ggatggagttaccagtgtgacttatggagtataggttgtatactatttgaactatgcacg 58582 Query: 995 gta 997 ||| Sbjct: 58581 gta 58579
>dbj|AP003048.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710A02 Length = 157201 Score = 46.1 bits (23), Expect = 0.44 Identities = 23/23 (100%) Strand = Plus / Plus Query: 607 aagtacagggatgctgcaatgat 629 ||||||||||||||||||||||| Sbjct: 19981 aagtacagggatgctgcaatgat 20003
>emb|BX827951.1|CNS0A4FP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH38ZD04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1647 Score = 46.1 bits (23), Expect = 0.44 Identities = 59/71 (83%) Strand = Plus / Plus Query: 925 tttaggacttggatggagttacccatgtgatatctggagcgttggttgtatactagttga 984 |||||| || ||||||||||||| ||||| | ||||| | |||||||||||| |||| Sbjct: 1047 tttaggtctaggatggagttaccagtgtgacttatggagtataggttgtatactatttga 1106 Query: 985 actctgcacgg 995 ||| ||||||| Sbjct: 1107 actatgcacgg 1117
>dbj|AK066167.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054D23, full insert sequence Length = 1570 Score = 46.1 bits (23), Expect = 0.44 Identities = 23/23 (100%) Strand = Plus / Plus Query: 607 aagtacagggatgctgcaatgat 629 ||||||||||||||||||||||| Sbjct: 351 aagtacagggatgctgcaatgat 373
>gb|AC145926.4| Gallus gallus BAC clone CH261-29I12 from chromosome unknown, complete sequence Length = 224974 Score = 46.1 bits (23), Expect = 0.44 Identities = 23/23 (100%) Strand = Plus / Minus Query: 306 ctcctctgagagaagatgacaag 328 ||||||||||||||||||||||| Sbjct: 205491 ctcctctgagagaagatgacaag 205469
>gb|U16178.1|ATU16178 Arabidopsis thaliana protein kinase (AFC3) mRNA, partial cds Length = 1395 Score = 46.1 bits (23), Expect = 0.44 Identities = 59/71 (83%) Strand = Plus / Plus Query: 925 tttaggacttggatggagttacccatgtgatatctggagcgttggttgtatactagttga 984 |||||| || ||||||||||||| ||||| | ||||| | |||||||||||| |||| Sbjct: 777 tttaggtctaggatggagttaccagtgtgacttatggagtataggttgtatactatttga 836 Query: 985 actctgcacgg 995 ||| ||||||| Sbjct: 837 actatgcacgg 847
>dbj|D45355.1|ATHPKAME3C Arabidopsis thaliana AME3 mRNA for protein kinase, complete cds Length = 1468 Score = 46.1 bits (23), Expect = 0.44 Identities = 59/71 (83%) Strand = Plus / Plus Query: 925 tttaggacttggatggagttacccatgtgatatctggagcgttggttgtatactagttga 984 |||||| || ||||||||||||| ||||| | ||||| | |||||||||||| |||| Sbjct: 851 tttaggtctaggatggagttaccagtgtgacttatggagtataggttgtatactatttga 910 Query: 985 actctgcacgg 995 ||| ||||||| Sbjct: 911 actatgcacgg 921
>gb|CP000459.1| Burkholderia cenocepacia HI2424 chromosome 2, complete genome Length = 2998664 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 122 ccgctcgaccgccgcccgcgca 143 |||||||||||||||||||||| Sbjct: 1656645 ccgctcgaccgccgcccgcgca 1656666 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 117 acgcgccgctcgaccgccgcccgcgc 142 |||||| ||||||||||||||||||| Sbjct: 2920860 acgcgctgctcgaccgccgcccgcgc 2920835
>gb|CP000379.1| Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence Length = 2788459 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 ccgctcgaccgccgcccgcgca 143 |||||||||||||||||||||| Sbjct: 824479 ccgctcgaccgccgcccgcgca 824458 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 117 acgcgccgctcgaccgccgcccgcgc 142 |||||| ||||||||||||||||||| Sbjct: 2346122 acgcgctgctcgaccgccgcccgcgc 2346147
>gb|AC146347.4| Pan troglodytes clone rp43-34h2, complete sequence Length = 157530 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1041 cagagtttttgagttaccagag 1062 |||||||||||||||||||||| Sbjct: 64836 cagagtttttgagttaccagag 64857
>gb|AC091151.11| Homo sapiens chromosome 18, clone RP11-749H17, complete sequence Length = 170085 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1240 gtattttgttgttgttccttttgtgt 1265 |||||||||||||||| ||||||||| Sbjct: 96559 gtattttgttgttgttgcttttgtgt 96534
>emb|AL021877.1|HS101G11 Human DNA sequence from clone RP1-101G11 on chromosome 22q12, complete sequence Length = 150236 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1041 cagagtttttgagttaccagag 1062 |||||||||||||||||||||| Sbjct: 92425 cagagtttttgagttaccagag 92446
>gb|AC093179.1| Homo sapiens chromosome 3 clone RP11-983J7 map 3p, complete sequence Length = 181321 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1237 tatgtattttgttgttgttccttttg 1262 ||||||||||||||||||| |||||| Sbjct: 91820 tatgtattttgttgttgttgcttttg 91795
>gb|AC099850.7| Homo sapiens chromosome 17, clone CTD-2510F5, complete sequence Length = 210344 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 753 gattttggcagcacaacatatg 774 |||||||||||||||||||||| Sbjct: 64082 gattttggcagcacaacatatg 64103
>gb|AC090937.2| Homo sapiens chromosome 3 clone RP11-316A10 map 3p, complete sequence Length = 160702 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1237 tatgtattttgttgttgttccttttg 1262 ||||||||||||||||||| |||||| Sbjct: 126420 tatgtattttgttgttgttgcttttg 126445
>emb|AM260522.1| Helicobacter acinonychis str. Sheeba complete genome, strain Sheeba Length = 1553927 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1086 tcaaacccatgaaaatttggagcat 1110 |||||||||||||| |||||||||| Sbjct: 1384692 tcaaacccatgaaagtttggagcat 1384668
>gb|AC185330.2| Nasonia giraulti BAC NG_Bb-47D01 (Clemson University Genomics Nasonia giraulti BAC Library) complete sequence Length = 131834 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 648 gcagcgttgtaaatatgaaaa 668 ||||||||||||||||||||| Sbjct: 74694 gcagcgttgtaaatatgaaaa 74714
>gb|AC103624.9| Mus musculus chromosome 5, clone RP24-258B22, complete sequence Length = 172330 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1330 gggaaagcatgaaagctgtta 1350 ||||||||||||||||||||| Sbjct: 55864 gggaaagcatgaaagctgtta 55844
>gb|AC158155.4| Mus musculus chromosome 3, clone RP23-167L9, complete sequence Length = 205345 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1241 tattttgttgttgttccttttgtgt 1265 |||||||||||||||| |||||||| Sbjct: 204972 tattttgttgttgttctttttgtgt 204996
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1515 agatgacgtgcttgagatcct 1535 ||||||||||||||||||||| Sbjct: 361700 agatgacgtgcttgagatcct 361680
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 ccgctcgaccgccgcccgcgc 142 ||||||||||||||||||||| Sbjct: 1305294 ccgctcgaccgccgcccgcgc 1305314
>gb|BC079608.1| Mus musculus neurexophilin 1, mRNA (cDNA clone IMAGE:30360281) Length = 2545 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1469 agaggcccttgagcatccattcttg 1493 |||||||| |||||||||||||||| Sbjct: 1588 agaggcccatgagcatccattcttg 1612
>gb|BC068137.1| Mus musculus neurexophilin 1, mRNA (cDNA clone IMAGE:30534192), partial cds Length = 2593 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1469 agaggcccttgagcatccattcttg 1493 |||||||| |||||||||||||||| Sbjct: 1638 agaggcccatgagcatccattcttg 1662
>gb|AC124081.7| Mus musculus chromosome 3, clone RP24-384A12, complete sequence Length = 223177 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1241 tattttgttgttgttccttttgtgt 1265 |||||||||||||||| |||||||| Sbjct: 217757 tattttgttgttgttctttttgtgt 217733
>dbj|AK163438.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230033C15 product:neurexophilin 1, full insert sequence Length = 2133 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1469 agaggcccttgagcatccattcttg 1493 |||||||| |||||||||||||||| Sbjct: 1322 agaggcccatgagcatccattcttg 1346
>emb|CT010458.8| Mouse DNA sequence from clone RP23-279C9 on chromosome 13, complete sequence Length = 240541 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1100 atttggagcatcttgctatga 1120 ||||||||||||||||||||| Sbjct: 17071 atttggagcatcttgctatga 17091
>gb|AC025198.12| Homo sapiens chromosome 17, clone RP11-766H1, complete sequence Length = 198524 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1618 tctcttccatggaatgggagt 1638 ||||||||||||||||||||| Sbjct: 43137 tctcttccatggaatgggagt 43117
>dbj|AK083014.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530033G22 product:neurexophilin 1, full insert sequence Length = 1982 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1469 agaggcccttgagcatccattcttg 1493 |||||||| |||||||||||||||| Sbjct: 1874 agaggcccatgagcatccattcttg 1898
>dbj|AK047847.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130005L03 product:NEUREXOPHILIN 1 PRECURSOR homolog [Homo sapiens], full insert sequence Length = 2423 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1469 agaggcccttgagcatccattcttg 1493 |||||||| |||||||||||||||| Sbjct: 1530 agaggcccatgagcatccattcttg 1554
>ref|NM_008751.2| Mus musculus neurexophilin 1 (Nxph1), mRNA dbj|AK043942.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830055C10 product:neurexophilin 1, full insert sequence Length = 2678 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1469 agaggcccttgagcatccattcttg 1493 |||||||| |||||||||||||||| Sbjct: 1500 agaggcccatgagcatccattcttg 1524
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1188 tccataccagtgtctcaagct 1208 ||||||||||||||||||||| Sbjct: 17809676 tccataccagtgtctcaagct 17809696
>gb|AE016829.1| Coxiella burnetii strain RSA 493 plasmid pQpH1, complete sequence Length = 37393 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1380 atgcaaaacatagaacattct 1400 ||||||||||||||||||||| Sbjct: 5080 atgcaaaacatagaacattct 5060
>emb|X75356.1|CBQPH1 C.burnetii QpH1 plasmid, complete genomic sequence Length = 37329 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1380 atgcaaaacatagaacattct 1400 ||||||||||||||||||||| Sbjct: 31232 atgcaaaacatagaacattct 31252
>gb|AC068941.7| Homo sapiens BAC clone RP11-465O11 from 2, complete sequence Length = 101127 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1716 tacatatgttgactgatgtgt 1736 ||||||||||||||||||||| Sbjct: 38595 tacatatgttgactgatgtgt 38575
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 cgcgccgctcgaccgccgcccgcgc 142 |||||||||| |||||||||||||| Sbjct: 5676786 cgcgccgctccaccgccgcccgcgc 5676810
>dbj|AP005574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1595_D08 Length = 116351 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1188 tccataccagtgtctcaagct 1208 ||||||||||||||||||||| Sbjct: 50320 tccataccagtgtctcaagct 50340
>dbj|AP005399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0676H02 Length = 144252 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1188 tccataccagtgtctcaagct 1208 ||||||||||||||||||||| Sbjct: 118310 tccataccagtgtctcaagct 118330
>ref|XM_566595.1| Cryptococcus neoformans var. neoformans JEC21 splicing factor Prp8 (CNA01350) partial mRNA Length = 7731 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1515 agatgacgtgcttgagatcct 1535 ||||||||||||||||||||| Sbjct: 1903 agatgacgtgcttgagatcct 1883
>gb|AE001439.1| Helicobacter pylori J99, complete genome Length = 1643831 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1086 tcaaacccatgaaaatttggagcat 1110 |||||||||||| |||||||||||| Sbjct: 1267799 tcaaacccatgagaatttggagcat 1267775
>emb|BX640476.7| Zebrafish DNA sequence from clone DKEY-57C9 in linkage group 21, complete sequence Length = 127139 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1753 attctcaatgaatatattttg 1773 ||||||||||||||||||||| Sbjct: 17018 attctcaatgaatatattttg 17038
>emb|BX321872.10| Zebrafish DNA sequence from clone CH211-281K19 in linkage group 10, complete sequence Length = 78006 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1245 ttgttgttgttccttttgtgt 1265 ||||||||||||||||||||| Sbjct: 10073 ttgttgttgttccttttgtgt 10093
>gb|AC012147.7|AC012147 Mus musculus, clone RP23-191A4, complete sequence Length = 217034 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1469 agaggcccttgagcatccattcttg 1493 |||||||| |||||||||||||||| Sbjct: 118630 agaggcccatgagcatccattcttg 118654
>gb|AF234652.1|AF234652 Mesembryanthemum crystallinum protein kinase MK5 mRNA, complete cds Length = 1738 Score = 42.1 bits (21), Expect = 6.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 525 aggtacctttggtcaggtgttggaatgttggga 557 |||||||||||||||||| || ||||| ||||| Sbjct: 423 aggtacctttggtcaggtattagaatgctggga 455
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 130 ccgccgcccgcgcaagcggcagcgc 154 |||||||||||||||||||| |||| Sbjct: 2864885 ccgccgcccgcgcaagcggcggcgc 2864909
>emb|AL773542.11| Zebrafish DNA sequence from clone CH211-174L22, complete sequence Length = 163443 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1753 attctcaatgaatatattttg 1773 ||||||||||||||||||||| Sbjct: 38407 attctcaatgaatatattttg 38427
>gb|AC154668.2| Mus musculus BAC clone RP24-285D22 from 13, complete sequence Length = 147595 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1100 atttggagcatcttgctatga 1120 ||||||||||||||||||||| Sbjct: 29404 atttggagcatcttgctatga 29384
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1172 atgttgctgttcttgatccat 1192 ||||||||||||||||||||| Sbjct: 1171052 atgttgctgttcttgatccat 1171072
>gb|M64478.1|BACCRYIIIC Bacillus thuringiensis crystal protein (cryIIIC) gene, complete cds Length = 4004 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1378 tgatgcaaaacatagaacatt 1398 ||||||||||||||||||||| Sbjct: 2571 tgatgcaaaacatagaacatt 2591
>gb|U04368.1|BTU04368 Bacillus thuringiensis kumamotoensis HD867 CryIII delta-endotoxin gene, partial cds Length = 3414 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1378 tgatgcaaaacatagaacatt 1398 ||||||||||||||||||||| Sbjct: 2388 tgatgcaaaacatagaacatt 2408
>gb|U04367.1|BTU04367 Bacillus thuringiensis dakota HD511 CryIII delta-endotoxin gene, partial cds Length = 3414 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1378 tgatgcaaaacatagaacatt 1398 ||||||||||||||||||||| Sbjct: 2388 tgatgcaaaacatagaacatt 2408 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 337,014,776 Number of extensions: 18558210 Number of successful extensions: 379956 Number of sequences better than 10.0: 97 Number of HSP's gapped: 379927 Number of HSP's successfully gapped: 172 Length of query: 1797 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1774 Effective length of database: 18,503,978,556 Effective search space: 32826057958344 Effective search space used: 32826057958344 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)