ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf97i14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os02g45590:12002.t04146:unspliced-genomic expressed protein 37 0.13
2LOC_Os11g43300:12011.t03860:unspliced-genomic retrotransposo... 30 0.38
3LOC_Os05g43950:12005.t03884:unspliced-genomic expressed protein 35 0.62
4LOC_Os12g32950:12012.t02988:unspliced-genomic membrane prote... 33 2.2
5LOC_Os04g31430:12004.t02825:unspliced-genomic expressed protein 33 2.2
6LOC_Os12g34802:12012.t004164:unspliced-genomic expressed pro... 32 3.1
7LOC_Os08g16600:12008.t01532:unspliced-genomic expressed protein 32 4.2
8LOC_Os03g04610:12003.t00338:unspliced-genomic expressed protein 26 4.3
9LOC_Os10g35950:12010.t02883:unspliced-genomic 10-deacetylbac... 31 5.8
10LOC_Os05g11950:12005.t01025:unspliced-genomic esterase precu... 31 5.8
11LOC_Os02g50370:12002.t04621:unspliced-genomic ATP binding pr... 31 5.8
12LOC_Os02g45450:12002.t04132:unspliced-genomic dehydration-re... 31 5.8
13LOC_Os09g02380:12009.t00137:unspliced-genomic hypothetical p... 31 7.9
14LOC_Os12g28390:12012.t02549:unspliced-genomic conserved hypo... 26 8.3
15LOC_Os02g09170:12002.t00764:unspliced-genomic sucrose-phosph... 25 8.9

>LOC_Os02g45590:12002.t04146:unspliced-genomic expressed protein|
          Length = 5093
 Score = 36.8 bits (74), Expect = 0.13
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +2 / +2

                                 
Query: 20   CPAHTRRRPRPHGLLAVKLAP 82
            CPAH R RPRPH L A+  +P
Sbjct: 2033 CPAHRRHRPRPHQLRALARSP 2095



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>LOC_Os11g43300:12011.t03860:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 1899

 Score = 29.9 bits (59), Expect(2) = 0.38
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -3 / +3

                                            
Query: 106  DSGHGIDGGRELHGEKAMGSRTTTGVSGAEGG 11
            + G G  GGRE  GEK    R T+G +  +GG
Sbjct: 990  ERGGGPRGGREGEGEKEREERETSG*TWPKGG 1085



 Score = 25.8 bits (50), Expect(2) = 0.38
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3 / +3

                         
Query: 421 QRSNEARPPAWEPP 380
           +  ++ARP AW+PP
Sbjct: 753 EEGDDARPGAWDPP 794



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>LOC_Os05g43950:12005.t03884:unspliced-genomic expressed protein|
          Length = 4122

 Score = 34.5 bits (69), Expect = 0.62
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -3 / +3

                                 
Query: 100 GHGIDGGRELHGEKAMGSRTTT 35
           GHG DGG+ L GE  MGS   T
Sbjct: 723 GHGQDGGQNLQGEAVMGSTAAT 788



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>LOC_Os12g32950:12012.t02988:unspliced-genomic membrane protein, putative, expressed|
          Length = 3164

 Score = 32.7 bits (65), Expect = 2.2
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -3 / -3

                                                  
Query: 124 TELQDMDSGHGIDGGRELHGEKAMGSRTTTGVSGAEGGE 8
           T + +     G+ GG E  GE+  GSR++ G  G+  GE
Sbjct: 171 TPVMNSPESRGVRGGGEAGGERERGSRSSVGRCGSFVGE 55



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>LOC_Os04g31430:12004.t02825:unspliced-genomic expressed protein|
          Length = 506

 Score = 32.7 bits (65), Expect = 2.2
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2 / -2

                                 
Query: 5   RLSSLCPAHTRRRPRPHGLLAV 70
           R SS C +H R RPR HG++ V
Sbjct: 103 RCSSSCLSHARTRPRDHGVVGV 38



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>LOC_Os12g34802:12012.t004164:unspliced-genomic expressed protein|
          Length = 2008

 Score = 32.2 bits (64), Expect = 3.1
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3 / -2

                                   
Query: 94  GIDGGRELHGEKAMGSRTTTGVSG 23
           G   GR +HG+K  GSRT+  V G
Sbjct: 150 GRGAGRAMHGKKGAGSRTSASVEG 79



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>LOC_Os08g16600:12008.t01532:unspliced-genomic expressed protein|
          Length = 4728

 Score = 31.8 bits (63), Expect = 4.2
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = +2 / +3

                                       
Query: 17  LCPAHTRRRPRPHGLLAVKLAPSVDPVP 100
           L P   RRRPRP G L + L P   P P
Sbjct: 141 LRPPPRRRRPRPGGALLLLLPPPPPPAP 224



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>LOC_Os03g04610:12003.t00338:unspliced-genomic expressed protein|
          Length = 1051

 Score = 25.8 bits (50), Expect(2) = 4.3
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = -3 / -2

                                            
Query: 106 DSGHGIDGGRELHGEKAMGSRTTTGVSGAEGGE 8
           D+G G DGGR   GE         G+    GGE
Sbjct: 432 DAGGGRDGGRRGGGEAEERGGGEGGLEALVGGE 334



 Score = 25.4 bits (49), Expect(2) = 4.3
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3 / -3

                                            
Query: 448 P*RRLAQKIQRSNEARPPAWEPPNYS*SSAAST 350
           P  R+ Q+ +     RPP   PP ++ +S A T
Sbjct: 668 PLGRVEQRNRTERPRRPPQHRPPTHTATSEAMT 570



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>LOC_Os10g35950:12010.t02883:unspliced-genomic 10-deacetylbaccatin III 10-O-acetyltransferase, putative, expressed|
          Length = 2699

 Score = 31.3 bits (62), Expect = 5.8
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -3 / +3

                                       
Query: 85  GGRELHGEKAMGSRTTTGVSGAEGGEAA 2
           GG E+HGE+  G     G + AEG E A
Sbjct: 75  GGAEVHGEEEAGGAGGAGGADAEGAEEA 158



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>LOC_Os05g11950:12005.t01025:unspliced-genomic esterase precursor, putative, expressed|
          Length = 2799

 Score = 31.3 bits (62), Expect = 5.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3 / -2

                                             
Query: 454 GVP*RRLAQKIQRSNEARPPAWEPPNYS*SSAAS 353
           G P RR   + +R+    PP W PP ++ SS+ S
Sbjct: 905 GSPARRRGARPRRAAARCPPPWRPPRWAPSSSPS 804



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>LOC_Os02g50370:12002.t04621:unspliced-genomic ATP binding protein, putative, expressed|
          Length = 6094

 Score = 31.3 bits (62), Expect = 5.8
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +3 / -2

                                     
Query: 291  AQEMEVPATDDCYPDGAYYYVEAAD 365
            A+ M++PATD C+P    Y +EAA+
Sbjct: 4953 AKHMQIPATDWCHPV*VNYAMEAAN 4879



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>LOC_Os02g45450:12002.t04132:unspliced-genomic dehydration-responsive element-binding protein 1A, putative,|
           expressed
          Length = 1272

 Score = 31.3 bits (62), Expect = 5.8
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +2 / -1

                                 
Query: 41  RPRPHGLLAVKLAPSVDPVPGV 106
           RP P+ LLAV+LA    P PGV
Sbjct: 294 RPEPYPLLAVRLAHLAHPPPGV 229



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>LOC_Os09g02380:12009.t00137:unspliced-genomic hypothetical protein|
          Length = 555

 Score = 30.9 bits (61), Expect = 7.9
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2 / +3

                                
Query: 20  CPAHTRRRPRPHGLLAVKLAP 82
           CP H RRRPRP   L +   P
Sbjct: 243 CPLHERRRPRPRPFLRLPQPP 305



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>LOC_Os12g28390:12012.t02549:unspliced-genomic conserved hypothetical protein|
          Length = 1589

 Score = 25.8 bits (50), Expect(2) = 8.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3 / +1

                         
Query: 421 QRSNEARPPAWEPP 380
           +  ++ARP AW+PP
Sbjct: 727 EEGDDARPGAWDPP 768



 Score = 24.9 bits (48), Expect(2) = 8.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3 / +1

                                    
Query: 88   DGGRELHGEKAMGSRTTTGVSGAE 17
            +GGRE  GEK    R T G+  A+
Sbjct: 967  EGGREGEGEKKREERETFGLGLAQ 1038



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>LOC_Os02g09170:12002.t00764:unspliced-genomic sucrose-phosphate synthase 1, putative, expressed|
          Length = 8388

 Score = 25.4 bits (49), Expect(2) = 8.9
 Identities = 14/36 (38%), Positives = 14/36 (38%)
 Frame = -1 / +2

                                               
Query: 405 RGLLPGNLLTTPDHQXXXXXXXXXXXXXRLWLGPPS 298
           R LLPG LL    H              R WL PPS
Sbjct: 263 RPLLPGALLRRGGHHRVRRDRPLQDMAPRAWLPPPS 370



 Score = 22.1 bits (42), Expect(2) = 8.9
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3 / +2

                                
Query: 442 RRLAQKIQRSNEARPPAWEPP 380
           RR  ++ Q  N  RPP   PP
Sbjct: 194 RRHPRRRQGGNRRRPPLAPPP 256


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 141,644,057
Number of extensions: 1767641
Number of successful extensions: 8288
Number of sequences better than 10.0: 15
Length of query: 194
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 146
Effective length of database: 52,912,542
Effective search space: 7725231132
Effective search space used: 7725231132
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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