ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf97i13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 82 5e-12
2gb|AC120983.6| Oryza sativa chromosome 3 BAC OSJNBb0011H13 genom... 82 5e-12
3ref|NM_001057697.1| Oryza sativa (japonica cultivar-group) Os03g... 70 2e-08
4ref|NM_001057696.1| Oryza sativa (japonica cultivar-group) Os03g... 70 2e-08
5dbj|AK067912.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 2e-08
6dbj|AK066640.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 2e-08
7dbj|AK066477.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 2e-08
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 60 2e-05
9dbj|AP005492.3| Oryza sativa (japonica cultivar-group) genomic D... 60 2e-05
10gb|AC128642.3| Oryza sativa (japonica cultivar-group) chromosome... 58 7e-05
11dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 58 7e-05
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 58 7e-05
13dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic D... 58 7e-05
14ref|NM_001054313.1| Oryza sativa (japonica cultivar-group) Os02g... 56 3e-04
15dbj|AK064814.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 3e-04
16emb|CT834689.1| Oryza sativa (indica cultivar-group) cDNA clone:... 54 0.001
17ref|NM_001074324.1| Oryza sativa (japonica cultivar-group) Os11g... 52 0.004
18dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.004
19dbj|AK111439.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.004
20emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310... 52 0.004
21emb|CT010479.25| Mouse DNA sequence from clone RP23-233G23 on ch... 50 0.016
22gb|AC110517.9| Mus musculus chromosome 17, clone RP23-13F15, com... 50 0.016
23emb|AL928772.8| Mouse DNA sequence from clone RP23-247I15 on chr... 50 0.016
24gb|AC120536.5| Oryza sativa (japonica cultivar-group) chromosome... 46 0.25
25emb|AL163171.4|CNS01RIF Human chromosome 14 DNA sequence BAC R-4... 46 0.25
26emb|AL390076.4|CNS06C7K Human chromosome 14 DNA sequence BAC C-2... 46 0.25
27emb|AL513210.32| Human DNA sequence from clone RP11-35J6 on chro... 44 0.99
28emb|AL161613.23| Human DNA sequence from clone RP11-22J15 on chr... 44 0.99
29emb|AL929042.5| Mouse DNA sequence from clone RP23-91K11 on chro... 44 0.99
30ref|XM_518072.2| PREDICTED: Pan troglodytes cyclin J-like, trans... 42 3.9
31gb|AC151728.19| Medicago truncatula clone mth2-48h10, complete s... 42 3.9
32gb|AC183502.5| Medicago truncatula clone mth2-75g17, complete se... 42 3.9
33gb|AC151460.34| Medicago truncatula clone mth2-6f11, complete se... 42 3.9
34gb|AC121922.3| Mus musculus BAC clone RP24-198H19 from chromosom... 42 3.9
35dbj|AK131381.1| Homo sapiens cDNA FLJ16450 fis, clone BRAWH2010552 42 3.9
36emb|CR936460.7| Zebrafish DNA sequence from clone DKEY-236E20 in... 42 3.9
37gb|AC106857.8| Homo sapiens chromosome 8, clone RP11-262O21, com... 42 3.9
38gb|AC022666.14| Homo sapiens, clone RP11-30K7, complete sequence 42 3.9
39gb|AC112191.2| Homo sapiens chromosome 5 clone RP11-34P1, comple... 42 3.9
40gb|M24890.1|ACCESTERAS Acinetobacter calcoaceticus esterase gene... 42 3.9
41emb|AL671518.3| Human DNA sequence from clone RP11-315C6 on chro... 42 3.9
42gb|AC091842.3| Homo sapiens chromosome 5 clone CTD-2155B8, compl... 42 3.9
43emb|Y00513.1|SCVIT5 Strongylocentrotus purpuratus vitellogenin g... 42 3.9
44emb|BX538353.1| Cryptosporidium parvum chromosome 6, complete se... 42 3.9
45gb|AC022333.11|AC022333 Homo sapiens chr3 BAC RP11-64O13 (Roswel... 42 3.9
46gb|AC006020.2|AC006020 Homo sapiens PAC clone RP5-1049N15 from 7... 42 3.9
47dbj|AP002754.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 3.9
48emb|AL935300.10| Zebrafish DNA sequence from clone CH211-241E1, ... 42 3.9
49gb|L38252.1|ACCEST Acinetobacter lwoffii orf1 and esterase (est)... 42 3.9
50dbj|AP003532.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 3.9 
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742
 Score = 81.8 bits (41), Expect = 5e-12
 Identities = 101/121 (83%)
 Strand = Plus / Plus

                                                                            
Query: 389      tgcagtggagaccatgatattgtagtaccatttttgagtacacaagcatggattaggtcc 448
                |||||||| ||||||||| |  || | |||||| |||| || || |||||||| || |||
Sbjct: 29662953 tgcagtggtgaccatgatctcatattgccatttctgagcacccaggcatggataagatcc 29663012

                                                                            
Query: 449      ttcaacttctctatagtcgatgattggagagcatggcatctcgatggccagtctgccggg 508
                || |||||||| ||||| ||||| ||||||||||||||| | ||||||||| |||| |||
Sbjct: 29663013 ttgaacttctccatagttgatgagtggagagcatggcatgtggatggccaggctgcaggg 29663072

                 
Query: 509      t 509
                |
Sbjct: 29663073 t 29663073



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                            
Query: 416      ccatttttgagtacacaagcatggattaggtccttcaacttctctatagtcgatgattgg 475
                ||||||||||| || || |||||||| || ||||| |||||||  ||||| ||||| |||
Sbjct: 29674055 ccatttttgagcactcaggcatggataagatcctttaacttcttcatagttgatgactgg 29674114

                                       
Query: 476      agagcatggcatctcgatggcca 498
                |||||||||||| | ||||||||
Sbjct: 29674115 agagcatggcatgtggatggcca 29674137



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                            
Query: 434      gcatggattaggtccttcaacttctctatagtcgatgattggagagcatggcatctcgat 493
                |||||||| || ||||| |||||| | ||  | ||||| ||||||||||||||||| |||
Sbjct: 29685863 gcatggataagatccttaaacttcaccattattgatgactggagagcatggcatcttgat 29685922

                                
Query: 494      ggccagtctgccgggt 509
                |||||| |||| ||||
Sbjct: 29685923 ggccaggctgcggggt 29685938
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>gb|AC120983.6| Oryza sativa chromosome 3 BAC OSJNBb0011H13 genomic sequence, complete
             sequence
          Length = 132782

 Score = 81.8 bits (41), Expect = 5e-12
 Identities = 101/121 (83%)
 Strand = Plus / Plus

                                                                         
Query: 389   tgcagtggagaccatgatattgtagtaccatttttgagtacacaagcatggattaggtcc 448
             |||||||| ||||||||| |  || | |||||| |||| || || |||||||| || |||
Sbjct: 94161 tgcagtggtgaccatgatctcatattgccatttctgagcacccaggcatggataagatcc 94220

                                                                         
Query: 449   ttcaacttctctatagtcgatgattggagagcatggcatctcgatggccagtctgccggg 508
             || |||||||| ||||| ||||| ||||||||||||||| | ||||||||| |||| |||
Sbjct: 94221 ttgaacttctccatagttgatgagtggagagcatggcatgtggatggccaggctgcaggg 94280

              
Query: 509   t 509
             |
Sbjct: 94281 t 94281



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                          
Query: 416    ccatttttgagtacacaagcatggattaggtccttcaacttctctatagtcgatgattgg 475
              ||||||||||| || || |||||||| || ||||| |||||||  ||||| ||||| |||
Sbjct: 105263 ccatttttgagcactcaggcatggataagatcctttaacttcttcatagttgatgactgg 105322

                                     
Query: 476    agagcatggcatctcgatggcca 498
              |||||||||||| | ||||||||
Sbjct: 105323 agagcatggcatgtggatggcca 105345



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                          
Query: 434    gcatggattaggtccttcaacttctctatagtcgatgattggagagcatggcatctcgat 493
              |||||||| || ||||| |||||| | ||  | ||||| ||||||||||||||||| |||
Sbjct: 117071 gcatggataagatccttaaacttcaccattattgatgactggagagcatggcatcttgat 117130

                              
Query: 494    ggccagtctgccgggt 509
              |||||| |||| ||||
Sbjct: 117131 ggccaggctgcggggt 117146
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>ref|NM_001057697.1| Oryza sativa (japonica cultivar-group) Os03g0730500 (Os03g0730500)
            mRNA, complete cds
          Length = 2967

 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                        
Query: 416  ccatttttgagtacacaagcatggattaggtccttcaacttctctatagtcgatgattgg 475
            ||||||||||| || || |||||||| || ||||| |||||||  ||||| ||||| |||
Sbjct: 1282 ccatttttgagcactcaggcatggataagatcctttaacttcttcatagttgatgactgg 1341

                                   
Query: 476  agagcatggcatctcgatggcca 498
            |||||||||||| | ||||||||
Sbjct: 1342 agagcatggcatgtggatggcca 1364
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>ref|NM_001057696.1| Oryza sativa (japonica cultivar-group) Os03g0730400 (Os03g0730400)
            mRNA, complete cds
          Length = 1674

 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                        
Query: 434  gcatggattaggtccttcaacttctctatagtcgatgattggagagcatggcatctcgat 493
            |||||||| || ||||| |||||||| ||||| ||||| ||||||||||||||| | |||
Sbjct: 1355 gcatggataagatccttgaacttctccatagttgatgagtggagagcatggcatgtggat 1414

                       
Query: 494  ggccagtctgc 504
            |||||| ||||
Sbjct: 1415 ggccaggctgc 1425
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>dbj|AK067912.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128F10, full
            insert sequence
          Length = 1677

 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                        
Query: 434  gcatggattaggtccttcaacttctctatagtcgatgattggagagcatggcatctcgat 493
            |||||||| || ||||| |||||||| ||||| ||||| ||||||||||||||| | |||
Sbjct: 1358 gcatggataagatccttgaacttctccatagttgatgagtggagagcatggcatgtggat 1417

                       
Query: 494  ggccagtctgc 504
            |||||| ||||
Sbjct: 1418 ggccaggctgc 1428
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>dbj|AK066640.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073A13, full
            insert sequence
          Length = 2970

 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                        
Query: 416  ccatttttgagtacacaagcatggattaggtccttcaacttctctatagtcgatgattgg 475
            ||||||||||| || || |||||||| || ||||| |||||||  ||||| ||||| |||
Sbjct: 1283 ccatttttgagcactcaggcatggataagatcctttaacttcttcatagttgatgactgg 1342

                                   
Query: 476  agagcatggcatctcgatggcca 498
            |||||||||||| | ||||||||
Sbjct: 1343 agagcatggcatgtggatggcca 1365
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>dbj|AK066477.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070H07, full
            insert sequence
          Length = 1931

 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                        
Query: 416  ccatttttgagtacacaagcatggattaggtccttcaacttctctatagtcgatgattgg 475
            ||||||||||| || || |||||||| || ||||| |||||||  ||||| ||||| |||
Sbjct: 1366 ccatttttgagcactcaggcatggataagatcctttaacttcttcatagttgatgactgg 1425

                                   
Query: 476  agagcatggcatctcgatggcca 498
            |||||||||||| | ||||||||
Sbjct: 1426 agagcatggcatgtggatggcca 1448
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 78/94 (82%)
 Strand = Plus / Plus

                                                                            
Query: 416      ccatttttgagtacacaagcatggattaggtccttcaacttctctatagtcgatgattgg 475
                ||||||||||| || || ||||||||  | ||||| |||||||  ||||   ||||||||
Sbjct: 18717918 ccatttttgagcactcaggcatggataggatcctttaacttcttcatagctaatgattgg 18717977

                                                  
Query: 476      agagcatggcatctcgatggccagtctgccgggt 509
                |||||||||||| | ||||||||| |||| ||||
Sbjct: 18717978 agagcatggcatgtggatggccaggctgcagggt 18718011
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>dbj|AP005492.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0077L03
          Length = 171177

 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 78/94 (82%)
 Strand = Plus / Plus

                                                                         
Query: 416   ccatttttgagtacacaagcatggattaggtccttcaacttctctatagtcgatgattgg 475
             ||||||||||| || || ||||||||  | ||||| |||||||  ||||   ||||||||
Sbjct: 43669 ccatttttgagcactcaggcatggataggatcctttaacttcttcatagctaatgattgg 43728

                                               
Query: 476   agagcatggcatctcgatggccagtctgccgggt 509
             |||||||||||| | ||||||||| |||| ||||
Sbjct: 43729 agagcatggcatgtggatggccaggctgcagggt 43762
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>gb|AC128642.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OJ1115_A03
             map S20262S, complete sequence
          Length = 149553

 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                          
Query: 467   gatgattggagagcatggcatctcgatggccagtctgccgggtaa 511
             ||||| |||||||| |||||| |||||||||||||||| ||||||
Sbjct: 31180 gatgactggagagcctggcatatcgatggccagtctgctgggtaa 31136
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                             
Query: 467      gatgattggagagcatggcatctcgatggccagtctgccgggtaa 511
                ||||| |||||||| |||||| |||||||||||||||| ||||||
Sbjct: 13314827 gatgactggagagcctggcatatcgatggccagtctgctgggtaa 13314783



 Score = 46.1 bits (23), Expect = 0.25
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                           
Query: 467      gatgattggagagcatggcatctcgatggccagtctgccgggt 509
                ||||| ||||| || |||||||| |||||||||||||| ||||
Sbjct: 13192974 gatgactggagggcctggcatcttgatggccagtctgcagggt 13192932
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                            
Query: 434      gcatggattaggtccttcaacttctctatagtcgatgattggagagcatggcatctcgat 493
                |||||||| || || || ||||| || || || |||||||||||||||||||| || |||
Sbjct: 28234666 gcatggataagatcattaaacttttccattgttgatgattggagagcatggcaccttgat 28234725

                                     
Query: 494      ggccagtctgccgggtaaagt 514
                |||||| |||| |||| ||||
Sbjct: 28234726 ggccaggctgcagggttaagt 28234746
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>dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1743_B12
          Length = 175645

 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                         
Query: 434   gcatggattaggtccttcaacttctctatagtcgatgattggagagcatggcatctcgat 493
             |||||||| || || || ||||| || || || |||||||||||||||||||| || |||
Sbjct: 26423 gcatggataagatcattaaacttttccattgttgatgattggagagcatggcaccttgat 26482

                                  
Query: 494   ggccagtctgccgggtaaagt 514
             |||||| |||| |||| ||||
Sbjct: 26483 ggccaggctgcagggttaagt 26503
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>ref|NM_001054313.1| Oryza sativa (japonica cultivar-group) Os02g0687900 (Os02g0687900)
            mRNA, complete cds
          Length = 1671

 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                        
Query: 434  gcatggattaggtccttcaacttctctatagtcgatgattggagagcatggcatctcgat 493
            |||||||| || || || ||||| || || || |||||||||||||||||||| || |||
Sbjct: 1279 gcatggataagatcattaaacttttccattgttgatgattggagagcatggcaccttgat 1338

                            
Query: 494  ggccagtctgccgggt 509
            |||||| |||| ||||
Sbjct: 1339 ggccaggctgcagggt 1354
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>dbj|AK064814.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E09, full
            insert sequence
          Length = 1673

 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                        
Query: 434  gcatggattaggtccttcaacttctctatagtcgatgattggagagcatggcatctcgat 493
            |||||||| || || || ||||| || || || |||||||||||||||||||| || |||
Sbjct: 1280 gcatggataagatcattaaacttttccattgttgatgattggagagcatggcaccttgat 1339

                            
Query: 494  ggccagtctgccgggt 509
            |||||| |||| ||||
Sbjct: 1340 ggccaggctgcagggt 1355
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>emb|CT834689.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI016F04, full
           insert sequence
          Length = 716

 Score = 54.0 bits (27), Expect = 0.001
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 434 gcatggattaggtccttcaacttctctatagtcgatgattggagagcatggcatctcgat 493
           |||||||| || || || ||||| || || || |||||||||||||||||||| || |||
Sbjct: 311 gcatggataagatcattaaacttttccattgttgatgattggagagcatggcaccttgat 370

                      
Query: 494 ggccagtctgc 504
           |||||| ||||
Sbjct: 371 ggccaggctgc 381
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>ref|NM_001074324.1| Oryza sativa (japonica cultivar-group) Os11g0431700 (Os11g0431700)
            mRNA, complete cds
          Length = 1523

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                  
Query: 467  gatgattggagagcatggcatctcgatggccagtctgc 504
            ||||| |||||||| |||||| ||||||||||||||||
Sbjct: 1260 gatgactggagagcctggcatatcgatggccagtctgc 1297
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                            
Query: 414      taccatttttgagtacacaagcatggattaggtccttcaacttctctatagtcgatgatt 473
                ||||||||||| | |||||||| ||| | || ||  ||||||||||| | || ||||| |
Sbjct: 24142866 taccatttttgggcacacaagcctgggtgagatcactcaacttctctgttgtagatgact 24142807

                                                      
Query: 474      ggagagcatggcatctcgatggccagtctgccgggtaa 511
                |||| || |||||  ||||||||||||| || ||||||
Sbjct: 24142806 ggagggcttggcacgtcgatggccagtcagcagggtaa 24142769
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>dbj|AK111439.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-A05, full
            insert sequence
          Length = 1523

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                  
Query: 467  gatgattggagagcatggcatctcgatggccagtctgc 504
            ||||| |||||||| |||||| ||||||||||||||||
Sbjct: 1260 gatgactggagagcctggcatatcgatggccagtctgc 1297
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>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132733

 Score = 52.0 bits (26), Expect = 0.004
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                         
Query: 414   taccatttttgagtacacaagcatggattaggtccttcaacttctctatagtcgatgatt 473
             ||||||||||| | |||||||| ||| | || ||  ||||||||||| | || ||||| |
Sbjct: 27557 taccatttttgggcacacaagcctgggtgagatcactcaacttctctgttgtagatgact 27498

                                                   
Query: 474   ggagagcatggcatctcgatggccagtctgccgggtaa 511
             |||| || |||||  ||||||||||||| || ||||||
Sbjct: 27497 ggagggcttggcacgtcgatggccagtcagcagggtaa 27460
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>emb|CT010479.25| Mouse DNA sequence from clone RP23-233G23 on chromosome 17, complete
             sequence
          Length = 203311

 Score = 50.1 bits (25), Expect = 0.016
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 520   gggttttattgtttattttgttgat 544
             |||||||||||||||||||||||||
Sbjct: 33952 gggttttattgtttattttgttgat 33928
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>gb|AC110517.9| Mus musculus chromosome 17, clone RP23-13F15, complete sequence
          Length = 218657

 Score = 50.1 bits (25), Expect = 0.016
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 520    gggttttattgtttattttgttgat 544
              |||||||||||||||||||||||||
Sbjct: 189384 gggttttattgtttattttgttgat 189360
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>emb|AL928772.8| Mouse DNA sequence from clone RP23-247I15 on chromosome 4 Contains the 3'
              end of a novel gene and a novel gene, complete sequence
          Length = 174731

 Score = 50.1 bits (25), Expect = 0.016
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 386    aattgcagtggagaccatgatattg 410
              |||||||||||||||||||||||||
Sbjct: 112426 aattgcagtggagaccatgatattg 112450
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>gb|AC120536.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0035N09, complete sequence
          Length = 129468

 Score = 46.1 bits (23), Expect = 0.25
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 467   gatgattggagagcatggcatctcgatggccagtctgccgggt 509
             ||||| ||||| || |||||||| |||||||||||||| ||||
Sbjct: 11785 gatgactggagggcctggcatcttgatggccagtctgcagggt 11743
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>emb|AL163171.4|CNS01RIF Human chromosome 14 DNA sequence BAC R-406A9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 148578

 Score = 46.1 bits (23), Expect = 0.25
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 514   tagactgggttttattgtttattttgttgatattt 548
             |||||||||||||| |||||| |||||| ||||||
Sbjct: 24103 tagactgggttttaatgtttagtttgttaatattt 24137
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>emb|AL390076.4|CNS06C7K Human chromosome 14 DNA sequence BAC C-2007P7 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 111091

 Score = 46.1 bits (23), Expect = 0.25
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 514   tagactgggttttattgtttattttgttgatattt 548
             |||||||||||||| |||||| |||||| ||||||
Sbjct: 22625 tagactgggttttaatgtttagtttgttaatattt 22591
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>emb|AL513210.32| Human DNA sequence from clone RP11-35J6 on chromosome 6 Contains six
             CpG islands, complete sequence
          Length = 157572

 Score = 44.1 bits (22), Expect = 0.99
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 204   tttataagatgcaggaaaagta 225
             ||||||||||||||||||||||
Sbjct: 38907 tttataagatgcaggaaaagta 38886
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>emb|AL161613.23| Human DNA sequence from clone RP11-22J15 on chromosome 13 Contains
            the 5' end of the LATS2 gene for LATS, large tumor
            suppressor, homolog 2 (LATS (large tumor suppressor,
            Drosophila) homolog 2), a ribosomal protein S12 (40S
            ribosomal protein S12) (RPS12) pseudogene, a chromosome 9
            open reading frame 12 (C9orf12) (INSP5K2,
            FLJ13161)pseudogene and two CpG islands, complete
            sequence
          Length = 113372

 Score = 44.1 bits (22), Expect = 0.99
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 521  ggttttattgtttattttgttgatat 546
            ||||||||| ||||||||||||||||
Sbjct: 3570 ggttttattctttattttgttgatat 3595
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>emb|AL929042.5| Mouse DNA sequence from clone RP23-91K11 on chromosome 2, complete
             sequence
          Length = 138491

 Score = 44.1 bits (22), Expect = 0.99
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 522   gttttattgtttattttgttga 543
             ||||||||||||||||||||||
Sbjct: 48062 gttttattgtttattttgttga 48041
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>ref|XM_518072.2| PREDICTED: Pan troglodytes cyclin J-like, transcript variant 3
           (CCNJL), mRNA
          Length = 3154

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 262 agtaccatttcagcctcataa 282
           |||||||||||||||||||||
Sbjct: 182 agtaccatttcagcctcataa 162
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>gb|AC151728.19| Medicago truncatula clone mth2-48h10, complete sequence
          Length = 111757

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 528    ttgtttattttgttgatattt 548
              |||||||||||||||||||||
Sbjct: 100605 ttgtttattttgttgatattt 100625
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>gb|AC183502.5| Medicago truncatula clone mth2-75g17, complete sequence
          Length = 121928

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 528   ttgtttattttgttgatattt 548
             |||||||||||||||||||||
Sbjct: 11153 ttgtttattttgttgatattt 11133
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>gb|AC151460.34| Medicago truncatula clone mth2-6f11, complete sequence
          Length = 100262

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 528   ttgtttattttgttgatattt 548
             |||||||||||||||||||||
Sbjct: 80662 ttgtttattttgttgatattt 80642
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>gb|AC121922.3| Mus musculus BAC clone RP24-198H19 from chromosome 9, complete sequence
          Length = 180690

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 523   ttttattgtttattttgttga 543
             |||||||||||||||||||||
Sbjct: 67660 ttttattgtttattttgttga 67640
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>dbj|AK131381.1| Homo sapiens cDNA FLJ16450 fis, clone BRAWH2010552
          Length = 3384

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 262 agtaccatttcagcctcataa 282
           |||||||||||||||||||||
Sbjct: 124 agtaccatttcagcctcataa 104
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>emb|CR936460.7| Zebrafish DNA sequence from clone DKEY-236E20 in linkage group 22,
             complete sequence
          Length = 139220

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 528   ttgtttattttgttgatattt 548
             |||||||||||||||||||||
Sbjct: 23723 ttgtttattttgttgatattt 23703
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>gb|AC106857.8| Homo sapiens chromosome 8, clone RP11-262O21, complete sequence
          Length = 159454

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 528   ttgtttattttgttgatattt 548
             |||||||||||||||||||||
Sbjct: 46485 ttgtttattttgttgatattt 46465
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>gb|AC022666.14| Homo sapiens, clone RP11-30K7, complete sequence
          Length = 150721

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 528   ttgtttattttgttgatattt 548
             |||||||||||||||||||||
Sbjct: 98578 ttgtttattttgttgatattt 98598
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>gb|AC112191.2| Homo sapiens chromosome 5 clone RP11-34P1, complete sequence
          Length = 153248

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 262   agtaccatttcagcctcataa 282
             |||||||||||||||||||||
Sbjct: 30431 agtaccatttcagcctcataa 30411
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>gb|M24890.1|ACCESTERAS Acinetobacter calcoaceticus esterase gene, complete cds
          Length = 2175

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 141  tttttcttaacatgttccaat 161
            |||||||||||||||||||||
Sbjct: 1298 tttttcttaacatgttccaat 1278
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>emb|AL671518.3| Human DNA sequence from clone RP11-315C6 on chromosome 6 Contains the
             5' end of the WASF1 gene for WAS protein family member 1,
             the gene for pre-mRNA splicing factor 17 (PRP17, EH
             binding protein 3, EHB3, CDC40), a novel gene and a CpG
             island, complete sequence
          Length = 67395

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 523   ttttattgtttattttgttga 543
             |||||||||||||||||||||
Sbjct: 55510 ttttattgtttattttgttga 55490
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>gb|AC091842.3| Homo sapiens chromosome 5 clone CTD-2155B8, complete sequence
          Length = 152147

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 262  agtaccatttcagcctcataa 282
            |||||||||||||||||||||
Sbjct: 5829 agtaccatttcagcctcataa 5849
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>emb|Y00513.1|SCVIT5 Strongylocentrotus purpuratus vitellogenin gene 5'-region
          Length = 3225

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 528 ttgtttattttgttgatattt 548
           |||||||||||||||||||||
Sbjct: 205 ttgtttattttgttgatattt 185
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>emb|BX538353.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 4/4
          Length = 277703

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 674    taatgttactaacttgatttg 694
              |||||||||||||||||||||
Sbjct: 273485 taatgttactaacttgatttg 273505
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>gb|AC022333.11|AC022333 Homo sapiens chr3 BAC RP11-64O13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 173907

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 707   tgtaatacaacagtaagtatt 727
             |||||||||||||||||||||
Sbjct: 31701 tgtaatacaacagtaagtatt 31681
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>gb|AC006020.2|AC006020 Homo sapiens PAC clone RP5-1049N15 from 7q31.2-7q32, complete sequence
          Length = 152811

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 521   ggttttattgtttattttgtt 541
             |||||||||||||||||||||
Sbjct: 83349 ggttttattgtttattttgtt 83369
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>dbj|AP002754.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-855O10, complete
             sequence
          Length = 185766

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 518   ctgggttttattgtttattttgttg 542
             |||||||||||||||| ||||||||
Sbjct: 71395 ctgggttttattgttttttttgttg 71371
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>emb|AL935300.10| Zebrafish DNA sequence from clone CH211-241E1, complete sequence
          Length = 157088

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 523   ttttattgtttattttgttgatatt 547
             ||||||||||||||||||| |||||
Sbjct: 42755 ttttattgtttattttgtttatatt 42731
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>gb|L38252.1|ACCEST Acinetobacter lwoffii orf1 and esterase (est) genes, complete cds
          Length = 2012

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 141  tttttcttaacatgttccaat 161
            |||||||||||||||||||||
Sbjct: 1935 tttttcttaacatgttccaat 1915
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>dbj|AP003532.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-822P1, complete
             sequences
          Length = 204928

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 707   tgtaatacaacagtaagtatt 727
             |||||||||||||||||||||
Sbjct: 81888 tgtaatacaacagtaagtatt 81908


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 192,718,418
Number of extensions: 9900193
Number of successful extensions: 200184
Number of sequences better than 10.0: 50
Number of HSP's gapped: 200184
Number of HSP's successfully gapped: 55
Length of query: 1033
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1010
Effective length of database: 18,503,978,556
Effective search space: 18689018341560
Effective search space used: 18689018341560
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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