ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf91o16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK120800:Os02g0797200 | 109 | 1e-24 | 2 | D29725:Os02g0796900 | 107 | 4e-24 | 3 | AK062846: | 95 | 2e-20 | 4 | AK058659:Os03g0674700 | 33 | 0.12 | 5 | AK065213:Os07g0204900 | 30 | 0.58 | 6 | AK104985:Os02g0755900 | 28 | 2.9 | 7 | AK073587:Os02g0755900 | 28 | 2.9 | 8 | AK121962:Os11g0546300 | 27 | 6.4 | 9 | Os07g0641300:Os07g0641300 | 27 | 8.5 | 10 | AK103001:Os08g0503000 | 24 | 9.2 |
|---|
>AK120800:Os02g0797200 | Length = 51 Score = 109 bits (272), Expect = 1e-24 Identities = 49/51 (96%), Positives = 50/51 (98%) Frame = +1 Query: 64 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 216 MPSHKTFRIK+KLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF Sbjct: 1 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>D29725:Os02g0796900 | Length = 50 Score = 107 bits (267), Expect = 4e-24 Identities = 48/50 (96%), Positives = 49/50 (98%) Frame = +1 Query: 67 PSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 216 PSHKTFRIK+KLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF Sbjct: 1 PSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 50
>AK062846: | Length = 51 Score = 95.1 bits (235), Expect = 2e-20 Identities = 42/50 (84%), Positives = 46/50 (92%) Frame = +1 Query: 64 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 213 MPS KTFRIKQKL+KK +QNRPIP WIRM+TDNTI+YN KRRHWRRTKLG Sbjct: 1 MPSQKTFRIKQKLSKKLKQNRPIPQWIRMKTDNTIKYNMKRRHWRRTKLG 50
>AK058659:Os03g0674700 | Length = 426 Score = 32.7 bits (73), Expect = 0.12 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = +1 Query: 127 PIPYWIRMRTDNTIRYNAKRRHWRRTKLGF*AGDEDDGSRRCRREKG 267 PIP + + + R +A R WR GF D D RCRR G Sbjct: 116 PIPSSLLISISKSFRSSANRMSWRPLYQGFPNADSDPEPGRCRRTDG 162
>AK065213:Os07g0204900 | Length = 578 Score = 30.4 bits (67), Expect = 0.58 Identities = 15/44 (34%), Positives = 26/44 (59%) Frame = -2 Query: 470 FFFFFDQFRVIKDFNWSNDLLVRQNTELMLNKSGSIISKI*RYP 339 F + + FR++K N+LLV+++T +NK G+I R+P Sbjct: 130 FGCYSNLFRLMKKVGADNNLLVKEHTHTFVNKGGTIGELDFRFP 173
>AK104985:Os02g0755900 | Length = 485 Score = 28.1 bits (61), Expect = 2.9 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +1 Query: 328 VAYLGYRHILLIMEPLLFSISSVFCLTSKSFD 423 ++YLGYRH L+ME L + V LT+ D Sbjct: 152 ISYLGYRHYRLLMERGLAPLKDVDQLTNGYLD 183
>AK073587:Os02g0755900 | Length = 485 Score = 28.1 bits (61), Expect = 2.9 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +1 Query: 328 VAYLGYRHILLIMEPLLFSISSVFCLTSKSFD 423 ++YLGYRH L+ME L + V LT+ D Sbjct: 152 ISYLGYRHYRLLMERGLAPLKDVDQLTNGYLD 183
>AK121962:Os11g0546300 | Length = 367 Score = 26.9 bits (58), Expect = 6.4 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 309 DIIIAACSLPGIPSYFADYGTTFIQHKLCI 398 D+I A + IP Y A TF +++LCI Sbjct: 242 DVISAVITSSFIPGYLAPRPATFFRNRLCI 271
>Os07g0641300:Os07g0641300 | Length = 264 Score = 26.6 bits (57), Expect = 8.5 Identities = 19/66 (28%), Positives = 32/66 (48%) Frame = +1 Query: 73 HKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF*AGDEDDGSRRC 252 H R + +A+++++ R + +R+ +R +RR RT+ G AGD G RR Sbjct: 127 HARVRRRALVARRRQRARQVERELRLLRRARLRRRRRRRRRSRTRRGG-AGDGYTGRRRR 185 Query: 253 RREKGL 270 GL Sbjct: 186 LLRLGL 191
>AK103001:Os08g0503000 | Length = 144 Score = 24.3 bits (51), Expect(2) = 9.2 Identities = 11/42 (26%), Positives = 22/42 (52%) Frame = +1 Query: 67 PSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRH 192 P + R K + +++++ RP+P +R + R +RRH Sbjct: 43 PRPRQVRRKNRSQRQRQRRRPLPSKKLLRRPSRWRRRLRRRH 84 Score = 20.8 bits (42), Expect(2) = 9.2 Identities = 8/13 (61%), Positives = 9/13 (69%) Frame = +3 Query: 234 RWLPSLPTGEGSR 272 RWLPS P E +R Sbjct: 89 RWLPSRPPSELAR 101 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 9,380,296 Number of extensions: 178879 Number of successful extensions: 430 Number of sequences better than 10.0: 10 Number of HSP's gapped: 430 Number of HSP's successfully gapped: 11 Length of query: 157 Length of database: 15,399,855 Length adjustment: 92 Effective length of query: 65 Effective length of database: 11,716,083 Effective search space: 761545395 Effective search space used: 761545395 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
