ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf91o16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1P51426:RL39_ORYSJ 60S ribosomal protein L39 - Oryza sativa subsp... 109 5e-24
2P51425:RL39_MAIZE 60S ribosomal protein L39 - Zea mays (Maize) 109 5e-24
3P51424:RL391_ARATH 60S ribosomal protein L39-1 - Arabidopsis tha... 100 2e-21
4Q8L8W6:RL392_ARATH 60S ribosomal protein L39-2 - Arabidopsis tha... 97 3e-20
5Q96W55:RL39_CANAL 60S ribosomal protein L39 - Candida albicans (... 93 4e-19
6P62893:RL39_RAT 60S ribosomal protein L39 - Rattus norvegicus (Rat) 91 1e-18
7P62892:RL39_MOUSE 60S ribosomal protein L39 - Mus musculus (Mouse) 91 1e-18
8Q90YS9:RL39_ICTPU 60S ribosomal protein L39 - Ictalurus punctatu... 91 1e-18
9P62891:RL39_HUMAN 60S ribosomal protein L39 - Homo sapiens (Human) 91 1e-18
10Q3T051:RL39_BOVIN 60S ribosomal protein L39 - Bos taurus (Bovine) 91 1e-18
11Q98TF5:RL39_CHICK 60S ribosomal protein L39 - Gallus gallus (Chi... 90 3e-18
12Q962S4:RL39_SPOFR 60S ribosomal protein L39 - Spodoptera frugipe... 89 5e-18
13Q6F482:RL39_PLUXY 60S ribosomal protein L39 - Plutella xylostell... 89 5e-18
14P05767:RL39_SCHPO 60S ribosomal protein L39 - Schizosaccharomyce... 89 7e-18
15Q6BHV8:RL39_DEBHA 60S ribosomal protein L39 - Debaryomyces hanse... 89 7e-18
16O16130:RL39_DROME 60S ribosomal protein L39 - Drosophila melanog... 88 2e-17
17Q758D8:RL39_ASHGO 60S ribosomal protein L39 - Ashbya gossypii (Y... 84 2e-16
18P04650:RL39_YEAST 60S ribosomal protein L39 - Saccharomyces cere... 83 4e-16
19Q96EH5:RL39L_HUMAN 60S ribosomal protein L39-like - Homo sapiens... 83 4e-16
20P48536:RL39_KLUMA 60S ribosomal protein L39 - Kluyveromyces marx... 80 2e-15
21Q6CW22:RL39_KLULA 60S ribosomal protein L39 - Kluyveromyces lact... 80 3e-15
22P52814:RL39_CAEEL 60S ribosomal protein L39 - Caenorhabditis ele... 78 2e-14
23Q5JGT6:RL39_PYRKO 50S ribosomal protein L39e - Pyrococcus kodaka... 53 4e-07
24P59473:RL39_PYRHO 50S ribosomal protein L39e - Pyrococcus horiko... 53 6e-07
25O28212:RL39_ARCFU 50S ribosomal protein L39e - Archaeoglobus ful... 52 1e-06
26Q9UYI8:RL39_PYRAB 50S ribosomal protein L39e - Pyrococcus abyssi 52 1e-06
27P59472:RL39_AERPE 50S ribosomal protein L39e - Aeropyrum pernix 52 1e-06
28O27650:RL39_METTH 50S ribosomal protein L39e - Methanobacterium ... 51 2e-06
29P13005:RL39_SULAC 50S ribosomal protein L39e - Sulfolobus acidoc... 49 8e-06
30Q8U3S6:RL39_PYRFU 50S ribosomal protein L39e - Pyrococcus furiosus 49 1e-05
31P22452:RL39_HALMA 50S ribosomal protein L39e - Haloarcula marism... 48 1e-05
32Q8SQP8:RL39_ENCCU 60S ribosomal protein L39 - Encephalitozoon cu... 48 2e-05
33Q980F9:RL39_SULSO 50S ribosomal protein L39e - Sulfolobus solfat... 47 2e-05
34Q9HMM9:RL39_HALSA 50S ribosomal protein L39e - Halobacterium sal... 47 2e-05
35Q6L2L2:RL39_PICTO 50S ribosomal protein L39e - Picrophilus torridus 46 5e-05
36Q8TUY3:RL39_METKA 50S ribosomal protein L39e - Methanopyrus kand... 45 9e-05
37Q971I1:RL39_SULTO 50S ribosomal protein L39e - Sulfolobus tokodaii 45 1e-04
38Q97CU2:RL39_THEVO 50S ribosomal protein L39e - Thermoplasma volc... 45 2e-04
39P54056:RL39_METJA 50S ribosomal protein L39e - Methanococcus jan... 45 2e-04
40Q9HM18:RL39_THEAC 50S ribosomal protein L39e - Thermoplasma acid... 44 2e-04
41Q8TIN2:RL39_METAC 50S ribosomal protein L39e - Methanosarcina ac... 44 2e-04
42Q8PYQ5:RL39_METMA 50S ribosomal protein L39e - Methanosarcina ma... 42 8e-04
43Q6M0V9:RL39_METMP 50S ribosomal protein L39e - Methanococcus mar... 41 0.002
44Q8ZTX6:RL39_PYRAE 50S ribosomal protein L39e - Pyrobaculum aerop... 39 0.011
45Q9ZTP4:ZDS_MAIZE Zeta-carotene desaturase, chloroplast/chromopla... 30 2.9
46P42497:PHYD_ARATH Phytochrome D - Arabidopsis thaliana (Mouse-ea... 30 5.1
47P29869:NU2M_DROSI NADH-ubiquinone oxidoreductase chain 2 - Droso... 30 5.1
48P29868:NU2M_DROSE NADH-ubiquinone oxidoreductase chain 2 - Droso... 30 5.1
49P03896:NU2M_DROME NADH-ubiquinone oxidoreductase chain 2 - Droso... 30 5.1
50P03895:NU2M_DROYA NADH-ubiquinone oxidoreductase chain 2 - Droso... 29 6.6 
>P51426:RL39_ORYSJ 60S ribosomal protein L39 - Oryza sativa subsp. japonica (Rice)|
          Length = 51
 Score =  109 bits (272), Expect = 5e-24
 Identities = 49/51 (96%), Positives = 50/51 (98%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 216
           MPSHKTFRIK+KLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1   MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
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>P51425:RL39_MAIZE 60S ribosomal protein L39 - Zea mays (Maize)|
          Length = 51

 Score =  109 bits (272), Expect = 5e-24
 Identities = 49/51 (96%), Positives = 50/51 (98%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 216
           MPSHKTFRIK+KLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1   MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
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>P51424:RL391_ARATH 60S ribosomal protein L39-1 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 51

 Score =  100 bits (250), Expect = 2e-21
 Identities = 44/51 (86%), Positives = 48/51 (94%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 216
           MPSHK+F IK+KL KK RQNRPIP+WIR+RTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1   MPSHKSFMIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 51
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>Q8L8W6:RL392_ARATH 60S ribosomal protein L39-2 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 51

 Score = 97.1 bits (240), Expect = 3e-20
 Identities = 43/51 (84%), Positives = 46/51 (90%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 216
           MPSHK+F IK+KL KK RQNRPIP WIR+RTDN IRYNAKRRHWRRTKLGF
Sbjct: 1   MPSHKSFMIKKKLGKKMRQNRPIPNWIRLRTDNKIRYNAKRRHWRRTKLGF 51
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>Q96W55:RL39_CANAL 60S ribosomal protein L39 - Candida albicans (Yeast)|
          Length = 51

 Score = 93.2 bits (230), Expect = 4e-19
 Identities = 41/50 (82%), Positives = 45/50 (90%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 213
           MPS K+FR KQKLAK Q+QNRP+P WIR+RTDN IRYNAKRRHWRRTKLG
Sbjct: 1   MPSQKSFRTKQKLAKAQKQNRPLPQWIRLRTDNKIRYNAKRRHWRRTKLG 50
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>P62893:RL39_RAT 60S ribosomal protein L39 - Rattus norvegicus (Rat)|
          Length = 51

 Score = 91.3 bits (225), Expect = 1e-18
 Identities = 41/50 (82%), Positives = 45/50 (90%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 213
           M SHKTFRIK+ LAKKQ+QNRPIP WIRM+T N IRYN+KRRHWRRTKLG
Sbjct: 1   MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
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>P62892:RL39_MOUSE 60S ribosomal protein L39 - Mus musculus (Mouse)|
          Length = 51

 Score = 91.3 bits (225), Expect = 1e-18
 Identities = 41/50 (82%), Positives = 45/50 (90%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 213
           M SHKTFRIK+ LAKKQ+QNRPIP WIRM+T N IRYN+KRRHWRRTKLG
Sbjct: 1   MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
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>Q90YS9:RL39_ICTPU 60S ribosomal protein L39 - Ictalurus punctatus (Channel catfish)|
          Length = 51

 Score = 91.3 bits (225), Expect = 1e-18
 Identities = 41/50 (82%), Positives = 45/50 (90%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 213
           M SHKTFRIK+ LAKKQ+QNRPIP WIRM+T N IRYN+KRRHWRRTKLG
Sbjct: 1   MASHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
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>P62891:RL39_HUMAN 60S ribosomal protein L39 - Homo sapiens (Human)|
          Length = 51

 Score = 91.3 bits (225), Expect = 1e-18
 Identities = 41/50 (82%), Positives = 45/50 (90%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 213
           M SHKTFRIK+ LAKKQ+QNRPIP WIRM+T N IRYN+KRRHWRRTKLG
Sbjct: 1   MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
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>Q3T051:RL39_BOVIN 60S ribosomal protein L39 - Bos taurus (Bovine)|
          Length = 51

 Score = 91.3 bits (225), Expect = 1e-18
 Identities = 41/50 (82%), Positives = 45/50 (90%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 213
           M SHKTFRIK+ LAKKQ+QNRPIP WIRM+T N IRYN+KRRHWRRTKLG
Sbjct: 1   MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
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>Q98TF5:RL39_CHICK 60S ribosomal protein L39 - Gallus gallus (Chicken)|
          Length = 51

 Score = 90.1 bits (222), Expect = 3e-18
 Identities = 40/50 (80%), Positives = 45/50 (90%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 213
           M SHKTF+IK+ LAKKQ+QNRPIP WIRM+T N IRYN+KRRHWRRTKLG
Sbjct: 1   MSSHKTFKIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
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>Q962S4:RL39_SPOFR 60S ribosomal protein L39 - Spodoptera frugiperda (Fall armyworm)|
          Length = 51

 Score = 89.4 bits (220), Expect = 5e-18
 Identities = 40/49 (81%), Positives = 44/49 (89%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M +HKTF IK+KLAKK +QNRPIP W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 1   MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 49
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>Q6F482:RL39_PLUXY 60S ribosomal protein L39 - Plutella xylostella (Diamondback moth)|
          Length = 51

 Score = 89.4 bits (220), Expect = 5e-18
 Identities = 40/49 (81%), Positives = 44/49 (89%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M +HKTF IK+KLAKK +QNRPIP W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 1   MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 49
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>P05767:RL39_SCHPO 60S ribosomal protein L39 - Schizosaccharomyces pombe (Fission|
           yeast)
          Length = 51

 Score = 89.0 bits (219), Expect = 7e-18
 Identities = 39/49 (79%), Positives = 42/49 (85%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           MPSHK+FR KQKLAK  RQNRPIP WIR+RT NT+ YN KRRHWRRTKL
Sbjct: 1   MPSHKSFRTKQKLAKAARQNRPIPQWIRLRTGNTVHYNMKRRHWRRTKL 49
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>Q6BHV8:RL39_DEBHA 60S ribosomal protein L39 - Debaryomyces hansenii (Yeast)|
           (Torulaspora hansenii)
          Length = 51

 Score = 89.0 bits (219), Expect = 7e-18
 Identities = 39/49 (79%), Positives = 44/49 (89%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           MPS K+FR KQKLAK Q+QNRP+P WIR+R+ NTIRYNAKRRHWRRTKL
Sbjct: 1   MPSQKSFRTKQKLAKAQKQNRPLPQWIRLRSGNTIRYNAKRRHWRRTKL 49
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>O16130:RL39_DROME 60S ribosomal protein L39 - Drosophila melanogaster (Fruit fly)|
          Length = 51

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M +HK+FRIKQKLAKK +QNR +P W+R+RT NTIRYNAKRRHWRRTKL
Sbjct: 1   MAAHKSFRIKQKLAKKLKQNRSVPQWVRLRTGNTIRYNAKRRHWRRTKL 49
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>Q758D8:RL39_ASHGO 60S ribosomal protein L39 - Ashbya gossypii (Yeast) (Eremothecium|
           gossypii)
          Length = 51

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 35/50 (70%), Positives = 44/50 (88%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 213
           M + K+F+IKQKLAK + QNRP+P W R++T+NTIRYNAKRRHWRRTK+G
Sbjct: 1   MAAKKSFKIKQKLAKAKNQNRPLPQWFRLKTNNTIRYNAKRRHWRRTKMG 50
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>P04650:RL39_YEAST 60S ribosomal protein L39 - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 51

 Score = 83.2 bits (204), Expect = 4e-16
 Identities = 35/49 (71%), Positives = 45/49 (91%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M + K+FRIKQK+AK ++QNRP+P WIR+RT+NTIRYNAKRR+WRRTK+
Sbjct: 1   MAAQKSFRIKQKMAKAKKQNRPLPQWIRLRTNNTIRYNAKRRNWRRTKM 49
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>Q96EH5:RL39L_HUMAN 60S ribosomal protein L39-like - Homo sapiens (Human)|
          Length = 51

 Score = 83.2 bits (204), Expect = 4e-16
 Identities = 37/50 (74%), Positives = 43/50 (86%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 213
           M SHKTF IK+ LAKKQ+QNRPIP WI+M+  + IRYN+KRRHWRRTKLG
Sbjct: 1   MSSHKTFTIKRFLAKKQKQNRPIPQWIQMKPGSKIRYNSKRRHWRRTKLG 50
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>P48536:RL39_KLUMA 60S ribosomal protein L39 - Kluyveromyces marxianus (Yeast)|
           (Candida kefyr)
          Length = 51

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 35/49 (71%), Positives = 42/49 (85%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M + K+F IKQKLAK + QNRP+P W R++T+NTIRYNAKRRHWRRTKL
Sbjct: 1   MAAKKSFIIKQKLAKAKNQNRPLPQWFRLKTNNTIRYNAKRRHWRRTKL 49
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>Q6CW22:RL39_KLULA 60S ribosomal protein L39 - Kluyveromyces lactis (Yeast) (Candida|
           sphaerica)
          Length = 51

 Score = 80.1 bits (196), Expect = 3e-15
 Identities = 35/50 (70%), Positives = 42/50 (84%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 213
           M + K+F IKQKLAK + QNRP+P W R++T+N IRYNAKRRHWRRTKLG
Sbjct: 1   MAAKKSFIIKQKLAKAKNQNRPLPQWYRLKTNNKIRYNAKRRHWRRTKLG 50
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>P52814:RL39_CAEEL 60S ribosomal protein L39 - Caenorhabditis elegans|
          Length = 51

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 34/49 (69%), Positives = 42/49 (85%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M + K   IK+KLAKKQ+QNRP+P W+RM+T NT++YNAKRRHWRRTKL
Sbjct: 1   MSALKKSFIKRKLAKKQKQNRPMPQWVRMKTGNTMKYNAKRRHWRRTKL 49
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>Q5JGT6:RL39_PYRKO 50S ribosomal protein L39e - Pyrococcus kodakaraensis (Thermococcus|
           kodakaraensis)
          Length = 51

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 23/49 (46%), Positives = 33/49 (67%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K F  K +LAK  +QNR +P W+ ++T+  +  + KRRHWRRTKL
Sbjct: 1   MARNKPFAKKLRLAKAAKQNRRVPVWVIVKTNRKVITHPKRRHWRRTKL 49
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>P59473:RL39_PYRHO 50S ribosomal protein L39e - Pyrococcus horikoshii|
          Length = 51

 Score = 52.8 bits (125), Expect = 6e-07
 Identities = 23/49 (46%), Positives = 32/49 (65%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K    K +LAK  +QNR +P W+ +RT+  +  + KRRHWRRTKL
Sbjct: 1   MARNKPLAKKLRLAKAMKQNRRVPVWVIVRTNRRVLTHPKRRHWRRTKL 49
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>O28212:RL39_ARCFU 50S ribosomal protein L39e - Archaeoglobus fulgidus|
          Length = 50

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 22/45 (48%), Positives = 32/45 (71%)
 Frame = +1

Query: 76  KTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           KT  +K++LAK  +QNR  P WI ++T  ++  + KRRHWRR+KL
Sbjct: 4   KTVGVKKRLAKAYKQNRRAPVWITVKTKRSVFGSPKRRHWRRSKL 48
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>Q9UYI8:RL39_PYRAB 50S ribosomal protein L39e - Pyrococcus abyssi|
          Length = 51

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K    K +LAK  +QNR +P W+ ++T+  +  + KRRHWRRTKL
Sbjct: 1   MARNKPLAKKLRLAKAMKQNRRVPVWVIVKTNRRVLTHPKRRHWRRTKL 49
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>P59472:RL39_AERPE 50S ribosomal protein L39e - Aeropyrum pernix|
          Length = 51

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 23/49 (46%), Positives = 31/49 (63%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K    K +LA+  + NR IP W+ +RT   IR+N  RRHWRR+KL
Sbjct: 1   MARNKPLGRKLRLARALKSNRAIPVWVVIRTSRRIRFNLLRRHWRRSKL 49
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>O27650:RL39_METTH 50S ribosomal protein L39e - Methanobacterium thermoautotrophicum|
          Length = 51

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K    K ++AK  RQNR +P W+ ++T+  +R + K RHWRRTKL
Sbjct: 1   MSRNKHVARKLRMAKANRQNRRVPAWVMVKTNYRVRSHPKMRHWRRTKL 49
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>P13005:RL39_SULAC 50S ribosomal protein L39e - Sulfolobus acidocaldarius|
          Length = 51

 Score = 48.9 bits (115), Expect = 8e-06
 Identities = 21/49 (42%), Positives = 30/49 (61%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  HK+   K +L K  ++N PIP W+ ++T   IR+N  RR+WRR  L
Sbjct: 1   MSKHKSLGKKLRLGKALKRNSPIPAWVIIKTQAEIRFNPLRRNWRRNNL 49
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>Q8U3S6:RL39_PYRFU 50S ribosomal protein L39e - Pyrococcus furiosus|
          Length = 51

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 21/49 (42%), Positives = 32/49 (65%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K    K +LAK  +QNR +P W+ ++T+  +  + KRR+WRRTKL
Sbjct: 1   MARNKPLAKKLRLAKALKQNRRVPVWVIVKTNRRVLTHPKRRYWRRTKL 49
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>P22452:RL39_HALMA 50S ribosomal protein L39e - Haloarcula marismortui (Halobacterium|
           marismortui)
          Length = 50

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 19/42 (45%), Positives = 28/42 (66%)
 Frame = +1

Query: 76  KTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRR 201
           K+   K++LAK   QN  +P W+ ++TD  ++ N KRRHWRR
Sbjct: 4   KSKATKKRLAKLDNQNSRVPAWVMLKTDREVQRNHKRRHWRR 45
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>Q8SQP8:RL39_ENCCU 60S ribosomal protein L39 - Encephalitozoon cuniculi|
          Length = 52

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 22/49 (44%), Positives = 29/49 (59%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M S KT  +K +L +  ++NR IP W RM  ++   YN  RRHWR  KL
Sbjct: 1   MGSRKTALVKTRLMRALKRNREIPAWKRMMKEHKGEYNRARRHWRSKKL 49
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>Q980F9:RL39_SULSO 50S ribosomal protein L39e - Sulfolobus solfataricus|
          Length = 51

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 22/49 (44%), Positives = 29/49 (59%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K    K +LAK  + N PIP WI ++T   +RYN  RR+WRR  L
Sbjct: 1   MSRNKPVAKKFRLAKALKANSPIPIWIVLKTRGRVRYNPLRRNWRRNDL 49
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>Q9HMM9:RL39_HALSA 50S ribosomal protein L39e - Halobacterium salinarium|
           (Halobacterium halobium)
          Length = 50

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 18/37 (48%), Positives = 28/37 (75%)
 Frame = +1

Query: 91  KQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRR 201
           K++LAK +RQN  +P W+ M+T+  ++ N KRR+WRR
Sbjct: 9   KKRLAKLERQNSRVPAWVMMKTNRDVQRNPKRRNWRR 45
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>Q6L2L2:RL39_PICTO 50S ribosomal protein L39e - Picrophilus torridus|
          Length = 51

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 19/49 (38%), Positives = 30/49 (61%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K   +K +L K  + NR +P W+ ++TD  +  N KRR+WRR+ L
Sbjct: 1   MARNKPLGLKIRLMKAVKSNRRVPGWVMVKTDRRVTQNYKRRNWRRSNL 49
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>Q8TUY3:RL39_METKA 50S ribosomal protein L39e - Methanopyrus kandleri|
          Length = 51

 Score = 45.4 bits (106), Expect = 9e-05
 Identities = 19/40 (47%), Positives = 27/40 (67%)
 Frame = +1

Query: 91  KQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           K ++AK  +QNR +P W+  +T   +  N KRRHWRR+KL
Sbjct: 10  KLRMAKAIKQNRRVPPWVVAKTGGRVIDNPKRRHWRRSKL 49
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>Q971I1:RL39_SULTO 50S ribosomal protein L39e - Sulfolobus tokodaii|
          Length = 51

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 19/49 (38%), Positives = 28/49 (57%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K    K +LA+  + N P+P W+ ++T+   RYN  RR WRR  L
Sbjct: 1   MSKNKPLGRKLRLARALKSNSPVPAWVIIKTNGKFRYNFHRRDWRRNDL 49
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>Q97CU2:RL39_THEVO 50S ribosomal protein L39e - Thermoplasma volcanium|
          Length = 51

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K    K +L KK +QNR +P W+ MRT   +  N  RR+WRR  L
Sbjct: 1   MSRNKELGRKIRLMKKVKQNRRVPGWVMMRTARKVTQNPLRRNWRRGNL 49
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>P54056:RL39_METJA 50S ribosomal protein L39e - Methanococcus jannaschii|
          Length = 51

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 20/49 (40%), Positives = 32/49 (65%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M S+K    K +LAK  +QNR +P ++ ++T   +R++ K R+WRR KL
Sbjct: 1   MGSNKPLGKKVRLAKALKQNRRVPLFVIVKTRGRVRFHPKMRYWRRKKL 49
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>Q9HM18:RL39_THEAC 50S ribosomal protein L39e - Thermoplasma acidophilum|
          Length = 51

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K    K +L KK +QNR +P W+ MRT   +  N  RR+WRR  L
Sbjct: 1   MSRNKELGRKIRLMKKIKQNRRVPGWVMMRTARKVTQNPLRRNWRRGSL 49
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>Q8TIN2:RL39_METAC 50S ribosomal protein L39e - Methanosarcina acetivorans|
          Length = 51

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 18/47 (38%), Positives = 29/47 (61%)
 Frame = +1

Query: 70  SHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           SH     K++LAK  +QN  +P W+ ++T+  +  + +RRHWRR  L
Sbjct: 2   SHNMKGQKKRLAKAHKQNTRVPVWVIVKTNRKVVSHPRRRHWRRRSL 48
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>Q8PYQ5:RL39_METMA 50S ribosomal protein L39e - Methanosarcina mazei (Methanosarcina|
           frisia)
          Length = 51

 Score = 42.4 bits (98), Expect = 8e-04
 Identities = 18/47 (38%), Positives = 28/47 (59%)
 Frame = +1

Query: 70  SHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           SH     K++LAK  +QN  +P W  ++T+  +  + +RRHWRR  L
Sbjct: 2   SHNMKGQKKRLAKAHKQNSRVPVWAIVKTNRKVVSHPRRRHWRRGSL 48
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>Q6M0V9:RL39_METMP 50S ribosomal protein L39e - Methanococcus maripaludis|
          Length = 51

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 19/49 (38%), Positives = 28/49 (57%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K    K +LAK  +QNR +P +   RT  +++ + K RHWRR  L
Sbjct: 1   MAGNKPLGKKIRLAKALKQNRRVPMFAIARTKGSVKQHPKMRHWRRKNL 49
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>Q8ZTX6:RL39_PYRAE 50S ribosomal protein L39e - Pyrobaculum aerophilum|
          Length = 51

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +1

Query: 64  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 210
           M  +K    K +LA   + NR  P W+ ++T   +  +  RRHWRR KL
Sbjct: 1   MARNKPLGKKLRLAAAFKXNRNPPVWVVVKTKRRVTRSPARRHWRRVKL 49
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>Q9ZTP4:ZDS_MAIZE Zeta-carotene desaturase, chloroplast/chromoplast precursor - Zea|
           mays (Maize)
          Length = 570

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = -2

Query: 470 FFFFFDQFRVIKDFNWSNDLLVRQNTELMLNKSGSIISKI*RYP 339
           F  + + FR++K     N+LLV+++T   +NK G+I     R+P
Sbjct: 122 FGCYSNLFRLMKKVGADNNLLVKEHTHTFVNKGGTIGELDFRFP 165
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>P42497:PHYD_ARATH Phytochrome D - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 1164

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 16/59 (27%), Positives = 24/59 (40%)
 Frame = +1

Query: 124 RPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF*AGDEDDGSRRCRREKGLGYLGFIMSRC 300
           R   +W R  T+  I++   + H           D+DDG R   R     +L  + SRC
Sbjct: 551 RDFLFWFRSHTEKEIKWGGAKHH---------PEDKDDGQRMNPRSSFQTFLEVVKSRC 600
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>P29869:NU2M_DROSI NADH-ubiquinone oxidoreductase chain 2 - Drosophila simulans (Fruit|
           fly)
          Length = 274

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 17/63 (26%), Positives = 33/63 (52%)
 Frame = +1

Query: 262 KGLGYLGFIMSRCF*KIXXXXXVAYLGYRHILLIMEPLLFSISSVFCLTSKSFDQLKSFI 441
           +GL ++  +M   + KI     ++YL  +++LLI   L   I ++  L   S  +L +F 
Sbjct: 52  EGLTWMNALMLMTWQKIAPLMLISYLNIKYLLLISVILSVIIGAIGGLNQTSLRKLMAFS 111

Query: 442 TLN 450
           ++N
Sbjct: 112 SIN 114
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>P29868:NU2M_DROSE NADH-ubiquinone oxidoreductase chain 2 - Drosophila sechellia|
           (Fruit fly)
          Length = 274

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 17/63 (26%), Positives = 33/63 (52%)
 Frame = +1

Query: 262 KGLGYLGFIMSRCF*KIXXXXXVAYLGYRHILLIMEPLLFSISSVFCLTSKSFDQLKSFI 441
           +GL ++  +M   + KI     ++YL  +++LLI   L   I ++  L   S  +L +F 
Sbjct: 52  EGLTWMNALMLMTWQKIAPLMLISYLNIKYLLLISVILSVIIGAIGGLNQTSLRKLMAFS 111

Query: 442 TLN 450
           ++N
Sbjct: 112 SIN 114
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>P03896:NU2M_DROME NADH-ubiquinone oxidoreductase chain 2 - Drosophila melanogaster|
           (Fruit fly)
          Length = 341

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 17/63 (26%), Positives = 33/63 (52%)
 Frame = +1

Query: 262 KGLGYLGFIMSRCF*KIXXXXXVAYLGYRHILLIMEPLLFSISSVFCLTSKSFDQLKSFI 441
           +GL ++  +M   + KI     ++YL  +++LLI   L   I ++  L   S  +L +F 
Sbjct: 119 EGLTWMNALMLMTWQKIAPLMLISYLNIKYLLLISVILSVIIGAIGGLNQTSLRKLMAFS 178

Query: 442 TLN 450
           ++N
Sbjct: 179 SIN 181
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>P03895:NU2M_DROYA NADH-ubiquinone oxidoreductase chain 2 - Drosophila yakuba (Fruit|
           fly)
          Length = 341

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 17/63 (26%), Positives = 33/63 (52%)
 Frame = +1

Query: 262 KGLGYLGFIMSRCF*KIXXXXXVAYLGYRHILLIMEPLLFSISSVFCLTSKSFDQLKSFI 441
           +GL ++  +M   + KI     ++YL  +++LLI   L   I ++  L   S  +L +F 
Sbjct: 119 EGLTWMNALMLMTWQKIAPLMLISYLNIKNLLLISVILSVIIGAIGGLNQTSLRKLMAFS 178

Query: 442 TLN 450
           ++N
Sbjct: 179 SIN 181


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 58,856,721
Number of extensions: 1064561
Number of successful extensions: 2377
Number of sequences better than 10.0: 50
Number of HSP's gapped: 2376
Number of HSP's successfully gapped: 50
Length of query: 157
Length of database: 100,686,439
Length adjustment: 104
Effective length of query: 53
Effective length of database: 72,159,759
Effective search space: 3824467227
Effective search space used: 3824467227
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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