Clone Name | FLbaf91n13 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AK067222:Os03g0322600 | 379 | e-105 | 2 | AK072055:Os01g0673800 | 47 | 3e-05 | 3 | AK120641:Os01g0673800 | 34 | 0.19 | 4 | Os01g0674600:Os01g0674600 | 33 | 0.54 | 5 | AK102349:Os07g0655400 | 29 | 6.0 | 6 | Os05g0461900:Os05g0461900 | 29 | 7.9 |
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>AK067222:Os03g0322600 | Length = 315 Score = 379 bits (973), Expect = e-105 Identities = 198/312 (63%), Positives = 238/312 (76%), Gaps = 1/312 (0%) Frame = +1 Query: 199 LPGLRCC-DLAARGSLPPLGLACXXXXXXXXXXXXXXXLQAGDSFGEDVLRMFLEDRQTN 375 LPGLRCC L A + P LG A LQAGDS GE+VLRMFL +RQ + Sbjct: 5 LPGLRCCRGLDAAAARPLLGPA-RARASPRASALRYSSLQAGDSLGEEVLRMFLAERQAH 63 Query: 376 GDLVSKVADMVLRRNDTGLDVIEATTDHENAEDVGQLEDFREDVMSQGVVGFEASGDFMS 555 GD V+K++DMV RRN L V+EA + EN+ DV + DVM +G++ A+ D++S Sbjct: 64 GDFVTKISDMVWRRNGGDLGVLEAAAEQENSADVAPPQPEEADVMGEGMLRIAATRDWVS 123 Query: 556 GDTSLTARRRLSALAGQKESDKRKEFNLLRYEAIKDELLLLTVGIGAACTVYCVLVFSLE 735 G++SL +RLSA Q E ++RKE NLLRYEA+KDELLLLT GIGAAC++YC+LVFSLE Sbjct: 124 GESSLPVSKRLSAKDRQDERERRKELNLLRYEALKDELLLLTTGIGAACSLYCLLVFSLE 183 Query: 736 AGISYAFGVAFSWLYLQLLYRRADSLSKEDVPEVFLKKKVKKIGIRSEDLKDTLDKTLGG 915 A +SYAFGVAFS LYLQLLYR D+LSK+DVPE+F+KKKVK+IGIRSEDLK+T++K LGG Sbjct: 184 AAVSYAFGVAFSCLYLQLLYRHTDNLSKKDVPEIFMKKKVKRIGIRSEDLKNTIEKVLGG 243 Query: 916 SLFVLSSPRLIIPAVIFGLSTFSSHFQNNIFNFELVPGMMGFFAYKAAALVQVYRDNDDL 1095 LSSPRL+IPA+ FGLST S HFQN+I NFELVPGMMGFFAYKAAALVQVYRDN+DL Sbjct: 244 ISVALSSPRLVIPAIFFGLSTLSDHFQNSILNFELVPGMMGFFAYKAAALVQVYRDNEDL 303 Query: 1096 RLILPEDDPDYS 1131 RLILPE+D D S Sbjct: 304 RLILPEEDADSS 315
>AK072055:Os01g0673800 | Length = 364 Score = 47.0 bits (110), Expect = 3e-05 Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 3/151 (1%) Frame = +1 Query: 643 RYEAIKDELLLLTVGIGAACTVYCVLVFSLEAGISYAFGVAFSWLYLQLLYRRADSLSKE 822 +Y +K L L T+GIG V +S E S+ G+ S LYL++L DSL+ Sbjct: 232 QYLELKQRLQLFTLGIGGIGLVSAYFSYSPEIAASFGAGLIGSVLYLRMLGTSVDSLA-- 289 Query: 823 DVPEVFLKKKVKKIGIRSEDLKDTLDKTLGGSLFVLSSPRLIIPAVIFGLSTFSSHF--- 993 G E +K + PRL+IP + + + Sbjct: 290 --------------GGTGETVKS-----------AAAQPRLLIPVALVMMYNRWNEILVP 324 Query: 994 QNNIFNFELVPGMMGFFAYKAAALVQVYRDN 1086 + EL+P ++GFF YK A Q +++ Sbjct: 325 DYGFMHLELIPMLVGFFTYKIATFAQAIQES 355
>AK120641:Os01g0673800 | Length = 108 Score = 34.3 bits (77), Expect = 0.19 Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 3/124 (2%) Frame = +1 Query: 724 FSLEAGISYAFGVAFSWLYLQLLYRRADSLSKEDVPEVFLKKKVKKIGIRSEDLKDTLDK 903 +S E S+ G+ S LYL++L DSL+ G E +K Sbjct: 3 YSPEIAASFGAGLIGSVLYLRMLGTSVDSLA----------------GGTGETVKSAA-- 44 Query: 904 TLGGSLFVLSSPRLIIPAVIFGLSTFSSHFQNNIFNF---ELVPGMMGFFAYKAAALVQV 1074 + PRL+IP + + + + F EL+P ++GFF YK A Q Sbjct: 45 ---------AQPRLLIPVALVMMYNRWNEILVPDYGFMHLELIPMLVGFFTYKIATFAQA 95 Query: 1075 YRDN 1086 +++ Sbjct: 96 IQES 99
>Os01g0674600:Os01g0674600 | Length = 160 Score = 32.7 bits (73), Expect = 0.54 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = +3 Query: 15 PPALPVPTAASIEEVGV*VDQRAGWRTALSAGNHRSHAVREAGAQARFGKQSPP 176 PP P T S + + D G TA +A HR H + R G++SPP Sbjct: 35 PPPPPFLTCLSEDGKVILPDSAGGRTTATAASRHRRHTQAQETTSFRAGQRSPP 88
>AK102349:Os07g0655400 | Length = 316 Score = 29.3 bits (64), Expect = 6.0 Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 4/86 (4%) Frame = +1 Query: 595 LAGQKESDKRKEFNLLRYEAIKDELLLLTVGIGAACTVYCVLVFSLEAGISYA----FGV 762 L G K+ +E NL + IK + + V + + ++ F ++ +SY FG+ Sbjct: 149 LVGIKQLMSEQELNLFVLK-IKAKWIPSLVAL-----ISVIVSFFVKELVSYLPVILFGI 202 Query: 763 AFSWLYLQLLYRRADSLSKEDVPEVF 840 SW+YL+ RR ++ K D E F Sbjct: 203 YMSWIYLRYFQRRLETGLKGDPSEEF 228
>Os05g0461900:Os05g0461900 | Length = 382 Score = 28.9 bits (63), Expect = 7.9 Identities = 16/49 (32%), Positives = 26/49 (53%) Frame = -1 Query: 464 FSWSVVASITSRPVSFLLKTMSATLDTKSPFVCLSSRNMRKTSSPKLSP 318 F+ V ASI S ++ + T+ + LD S F+ + +KTS+P P Sbjct: 142 FAAKVYASIRSGSLAIIASTLDSLLDLLSGFILWFTAFSKKTSNPYRYP 190 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 31,808,235 Number of extensions: 670993 Number of successful extensions: 1936 Number of sequences better than 10.0: 6 Number of HSP's gapped: 1935 Number of HSP's successfully gapped: 7 Length of query: 412 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 309 Effective length of database: 11,275,632 Effective search space: 3484170288 Effective search space used: 3484170288 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)