ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf91n13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK067222:Os03g0322600 379 e-105
2AK072055:Os01g0673800 47 3e-05
3AK120641:Os01g0673800 34 0.19
4Os01g0674600:Os01g0674600 33 0.54
5AK102349:Os07g0655400 29 6.0
6Os05g0461900:Os05g0461900 29 7.9

>AK067222:Os03g0322600 |
          Length = 315
 Score =  379 bits (973), Expect = e-105
 Identities = 198/312 (63%), Positives = 238/312 (76%), Gaps = 1/312 (0%)
 Frame = +1

Query: 199  LPGLRCC-DLAARGSLPPLGLACXXXXXXXXXXXXXXXLQAGDSFGEDVLRMFLEDRQTN 375
            LPGLRCC  L A  + P LG A                LQAGDS GE+VLRMFL +RQ +
Sbjct: 5    LPGLRCCRGLDAAAARPLLGPA-RARASPRASALRYSSLQAGDSLGEEVLRMFLAERQAH 63

Query: 376  GDLVSKVADMVLRRNDTGLDVIEATTDHENAEDVGQLEDFREDVMSQGVVGFEASGDFMS 555
            GD V+K++DMV RRN   L V+EA  + EN+ DV   +    DVM +G++   A+ D++S
Sbjct: 64   GDFVTKISDMVWRRNGGDLGVLEAAAEQENSADVAPPQPEEADVMGEGMLRIAATRDWVS 123

Query: 556  GDTSLTARRRLSALAGQKESDKRKEFNLLRYEAIKDELLLLTVGIGAACTVYCVLVFSLE 735
            G++SL   +RLSA   Q E ++RKE NLLRYEA+KDELLLLT GIGAAC++YC+LVFSLE
Sbjct: 124  GESSLPVSKRLSAKDRQDERERRKELNLLRYEALKDELLLLTTGIGAACSLYCLLVFSLE 183

Query: 736  AGISYAFGVAFSWLYLQLLYRRADSLSKEDVPEVFLKKKVKKIGIRSEDLKDTLDKTLGG 915
            A +SYAFGVAFS LYLQLLYR  D+LSK+DVPE+F+KKKVK+IGIRSEDLK+T++K LGG
Sbjct: 184  AAVSYAFGVAFSCLYLQLLYRHTDNLSKKDVPEIFMKKKVKRIGIRSEDLKNTIEKVLGG 243

Query: 916  SLFVLSSPRLIIPAVIFGLSTFSSHFQNNIFNFELVPGMMGFFAYKAAALVQVYRDNDDL 1095
                LSSPRL+IPA+ FGLST S HFQN+I NFELVPGMMGFFAYKAAALVQVYRDN+DL
Sbjct: 244  ISVALSSPRLVIPAIFFGLSTLSDHFQNSILNFELVPGMMGFFAYKAAALVQVYRDNEDL 303

Query: 1096 RLILPEDDPDYS 1131
            RLILPE+D D S
Sbjct: 304  RLILPEEDADSS 315



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>AK072055:Os01g0673800 |
          Length = 364

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 3/151 (1%)
 Frame = +1

Query: 643  RYEAIKDELLLLTVGIGAACTVYCVLVFSLEAGISYAFGVAFSWLYLQLLYRRADSLSKE 822
            +Y  +K  L L T+GIG    V     +S E   S+  G+  S LYL++L    DSL+  
Sbjct: 232  QYLELKQRLQLFTLGIGGIGLVSAYFSYSPEIAASFGAGLIGSVLYLRMLGTSVDSLA-- 289

Query: 823  DVPEVFLKKKVKKIGIRSEDLKDTLDKTLGGSLFVLSSPRLIIPAVIFGLSTFSSHF--- 993
                          G   E +K              + PRL+IP  +  +    +     
Sbjct: 290  --------------GGTGETVKS-----------AAAQPRLLIPVALVMMYNRWNEILVP 324

Query: 994  QNNIFNFELVPGMMGFFAYKAAALVQVYRDN 1086
                 + EL+P ++GFF YK A   Q  +++
Sbjct: 325  DYGFMHLELIPMLVGFFTYKIATFAQAIQES 355



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>AK120641:Os01g0673800 |
          Length = 108

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 3/124 (2%)
 Frame = +1

Query: 724  FSLEAGISYAFGVAFSWLYLQLLYRRADSLSKEDVPEVFLKKKVKKIGIRSEDLKDTLDK 903
            +S E   S+  G+  S LYL++L    DSL+                G   E +K     
Sbjct: 3    YSPEIAASFGAGLIGSVLYLRMLGTSVDSLA----------------GGTGETVKSAA-- 44

Query: 904  TLGGSLFVLSSPRLIIPAVIFGLSTFSSHFQNNIFNF---ELVPGMMGFFAYKAAALVQV 1074
                     + PRL+IP  +  +    +      + F   EL+P ++GFF YK A   Q 
Sbjct: 45   ---------AQPRLLIPVALVMMYNRWNEILVPDYGFMHLELIPMLVGFFTYKIATFAQA 95

Query: 1075 YRDN 1086
             +++
Sbjct: 96   IQES 99



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>Os01g0674600:Os01g0674600 |
          Length = 160

 Score = 32.7 bits (73), Expect = 0.54
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +3

Query: 15  PPALPVPTAASIEEVGV*VDQRAGWRTALSAGNHRSHAVREAGAQARFGKQSPP 176
           PP  P  T  S +   +  D   G  TA +A  HR H   +     R G++SPP
Sbjct: 35  PPPPPFLTCLSEDGKVILPDSAGGRTTATAASRHRRHTQAQETTSFRAGQRSPP 88



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>AK102349:Os07g0655400 |
          Length = 316

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
 Frame = +1

Query: 595 LAGQKESDKRKEFNLLRYEAIKDELLLLTVGIGAACTVYCVLVFSLEAGISYA----FGV 762
           L G K+    +E NL   + IK + +   V +     +  ++ F ++  +SY     FG+
Sbjct: 149 LVGIKQLMSEQELNLFVLK-IKAKWIPSLVAL-----ISVIVSFFVKELVSYLPVILFGI 202

Query: 763 AFSWLYLQLLYRRADSLSKEDVPEVF 840
             SW+YL+   RR ++  K D  E F
Sbjct: 203 YMSWIYLRYFQRRLETGLKGDPSEEF 228



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>Os05g0461900:Os05g0461900 |
          Length = 382

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 464 FSWSVVASITSRPVSFLLKTMSATLDTKSPFVCLSSRNMRKTSSPKLSP 318
           F+  V ASI S  ++ +  T+ + LD  S F+   +   +KTS+P   P
Sbjct: 142 FAAKVYASIRSGSLAIIASTLDSLLDLLSGFILWFTAFSKKTSNPYRYP 190


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 31,808,235
Number of extensions: 670993
Number of successful extensions: 1936
Number of sequences better than 10.0: 6
Number of HSP's gapped: 1935
Number of HSP's successfully gapped: 7
Length of query: 412
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 309
Effective length of database: 11,275,632
Effective search space: 3484170288
Effective search space used: 3484170288
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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