ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf94m06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK068043:Os02g0163600 30 1.0
2AY043283: 30 1.8
3AK102027:Os12g0249900 30 1.8
4AK110419: 29 3.0
5AK073491:Os08g0276200 29 3.0
6Os11g0675200:Os11g0675200 28 6.7
7AK103050:Os01g0930300 28 6.7
8AK072493:Os01g0311700 28 6.7
9Os11g0674400:Os11g0674400 27 8.7
10AK102990:Os10g0177200 27 8.7
11AK100927:Os07g0446100 27 8.7
12AK073875:Os02g0556700 27 8.7
13AK069946:Os09g0532700 27 8.7
14AK064016:Os10g0177200 27 8.7
15AK059792:Os07g0446100 27 8.7

>AK068043:Os02g0163600 |
          Length = 167
 Score = 30.4 bits (67), Expect = 1.0
 Identities = 20/70 (28%), Positives = 33/70 (47%)
 Frame = -1

Query: 350 IHQLKHYGIEKGTLSELGTRVSTPNNTRHVS*STNSDLHELAKPTFAICSSLPPSETVEL 171
           + +L+ + + +G  S   T  ++    R     T + LH L     A+ SSLPPS   + 
Sbjct: 5   LRRLRSWRVSRGATSPCSTSAASMAAAR-----TTNTLHRLLPLARAVHSSLPPSRYGDP 59

Query: 170 SSPYENKVPS 141
            SP + + PS
Sbjct: 60  RSPPQARRPS 69



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>AY043283: |
          Length = 1034

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 19/74 (25%), Positives = 32/74 (43%)
 Frame = +1

Query: 100 VLKGMETAPFKGNLDGTLFSYGEDNSTVSEGGNDEHMANVGFASSCKSLFVDYETCLVLL 279
           V KG+    F  +L+G     G DN+ + +G N E +A+           +    CL ++
Sbjct: 654 VPKGIGRPKFLNDLEGFPIGGGNDNTKIQDGWNLEELAH-----------LSQLRCLDMI 702

Query: 280 GVDTLVPSSDNVPF 321
            ++   P S   PF
Sbjct: 703 KLERATPCSSRDPF 716



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>AK102027:Os12g0249900 |
          Length = 654

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
 Frame = -2

Query: 301 LVQGCPRPT-TPGMSHNPQIVICMSSQNPRSPYVHHYPLPRLLSCLRHMKTRCHPNSL*K 125
           LV+  P P  TP      Q+V C  S   +S Y      P        +   CHP+   K
Sbjct: 187 LVRNEPSPAPTPEKPEATQVVECHPSPERKSTYTAPQEKPEAT-----LVVECHPSPERK 241

Query: 124 ALFPCPSKHP 95
           + +P P + P
Sbjct: 242 STYPAPPEKP 251



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>AK110419: |
          Length = 388

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
 Frame = -1

Query: 281 PNNTRHVS*STNSDLHELAKPTFAICSSLPPSET----VELSSPYENKVPSKFPLKGAVS 114
           P N   VS   N+ +  +A P+  I      S      V L +   N  PSKFP KG   
Sbjct: 132 PVNKEDVSTIFNAFMARIASPSRPIYFHTDDSRLRQMFVALKNASVNPQPSKFPFKG--- 188

Query: 113 MPFKTSSSATKNNW 72
            P +T ++A    W
Sbjct: 189 -PDRTKNAALAQKW 201



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>AK073491:Os08g0276200 |
          Length = 366

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 15/91 (16%)
 Frame = -1

Query: 230 LAKPTFA---------ICSSLPPSETVELSSP---YENKVPSKFPLKGAVSMPFKTSSSA 87
           LA P FA           +S+     ++L SP   Y   +PS FP+     MP + S S 
Sbjct: 139 LASPAFAGHFSMSHQAALASVTAQAQIQLQSPTTPYSEGLPSPFPITPKAVMPLQRSPSG 198

Query: 86  TKNN---WTLLKGAMLWLRSFMVLSLLSLGD 3
           T+ +     L K A    R    +S+  +GD
Sbjct: 199 TEGSVRRSVLEKSASFQSRPHNHVSVNMVGD 229



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>Os11g0675200:Os11g0675200 |
          Length = 727

 Score = 27.7 bits (60), Expect = 6.7
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +1

Query: 100 VLKGMETAPFKGNLDGTLFSYGEDNSTVSEGGNDEHMANV 219
           V KG+    F  +L+G   S G DN+ + +G N E +A++
Sbjct: 447 VPKGIGRLKFLNDLEGFPVSGGSDNAKMQDGWNLEELADL 486



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>AK103050:Os01g0930300 |
          Length = 322

 Score = 27.7 bits (60), Expect = 6.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 167 KTTQQSRKGVMMNIWRTWVLRAHANH 244
           + +++ R G+MM +WR W +R    H
Sbjct: 79  RVSKEERMGLMMLLWRIWYVRNGITH 104



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>AK072493:Os01g0311700 |
          Length = 196

 Score = 27.7 bits (60), Expect = 6.7
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +1

Query: 208 MANVGFASSCKSLFVDYETCLVLLGVDTLVPSSDNV 315
           +AN     +CK     Y  C+V L  D    SSD V
Sbjct: 34  LANYSLEDACKKTGPHYGLCIVTLSADRSAKSSDTV 69



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>Os11g0674400:Os11g0674400 |
          Length = 1005

 Score = 27.3 bits (59), Expect = 8.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +1

Query: 100 VLKGMETAPFKGNLDGTLFSYGEDNSTVSEGGNDEHMANV 219
           V KG+    F  +L+G     G DN+ + +G N E +A++
Sbjct: 614 VPKGIGRLKFLNDLEGFPIGGGNDNTKIQDGWNLEELAHL 653



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>AK102990:Os10g0177200 |
          Length = 386

 Score = 27.3 bits (59), Expect = 8.7
 Identities = 21/55 (38%), Positives = 27/55 (49%)
 Frame = -1

Query: 320 KGTLSELGTRVSTPNNTRHVS*STNSDLHELAKPTFAICSSLPPSETVELSSPYE 156
           K  L+E+   V    +   +S STNS LHE    +  + S  PPS  V  SSP E
Sbjct: 334 KKLLTEILGAVMLQLDGNPISVSTNSVLHEPMSTSSTLLSPSPPSPMV--SSPSE 386



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>AK100927:Os07g0446100 |
          Length = 513

 Score = 27.3 bits (59), Expect = 8.7
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -1

Query: 194 PPSETVELSSPYENKVPSKFPLKGAVSMPFKTSSSATKNNW 72
           PPS ++    P +   PSK     +  +P  TSSS+T N W
Sbjct: 321 PPSNSLNGWGPPDTSAPSKT----SGQVPVVTSSSSTYNGW 357



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>AK073875:Os02g0556700 |
          Length = 1166

 Score = 27.3 bits (59), Expect = 8.7
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -1

Query: 347 HQLKHYGIEKGTLSELGTRVS-TPNNTRHVS*STNSDLHELAK--PTFAICS 201
           H LKH G  K TLS+ G R   TP        + NSD+ +L +  P   +C+
Sbjct: 373 HLLKHLGSPKRTLSKSGGRTRVTPTKA-----ARNSDVSKLPRYSPRIVLCA 419



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>AK069946:Os09g0532700 |
          Length = 695

 Score = 27.3 bits (59), Expect = 8.7
 Identities = 21/73 (28%), Positives = 32/73 (43%)
 Frame = -1

Query: 275 NTRHVS*STNSDLHELAKPTFAICSSLPPSETVELSSPYENKVPSKFPLKGAVSMPFKTS 96
           N R +S S N  L E       + +   P+  +E+ +     +P+   LKG     F   
Sbjct: 183 NPRELSTSHNQFLKEKLPMNTPLAAPSLPALNIEIET---GSLPTLEELKG-----FLKE 234

Query: 95  SSATKNNWTLLKG 57
           S  ++NNW  LKG
Sbjct: 235 SRTSENNWVPLKG 247



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>AK064016:Os10g0177200 |
          Length = 386

 Score = 27.3 bits (59), Expect = 8.7
 Identities = 21/55 (38%), Positives = 27/55 (49%)
 Frame = -1

Query: 320 KGTLSELGTRVSTPNNTRHVS*STNSDLHELAKPTFAICSSLPPSETVELSSPYE 156
           K  L+E+   V    +   +S STNS LHE    +  + S  PPS  V  SSP E
Sbjct: 334 KKLLTEILGAVMLQLDGNPISVSTNSVLHEPMSTSSTLLSPSPPSPMV--SSPSE 386



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>AK059792:Os07g0446100 |
          Length = 263

 Score = 27.3 bits (59), Expect = 8.7
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -1

Query: 194 PPSETVELSSPYENKVPSKFPLKGAVSMPFKTSSSATKNNW 72
           PPS ++    P +   PSK     +  +P  TSSS+T N W
Sbjct: 71  PPSNSLNGWGPPDTSAPSKT----SGQVPVVTSSSSTYNGW 107


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 20,733,813
Number of extensions: 508463
Number of successful extensions: 1210
Number of sequences better than 10.0: 15
Number of HSP's gapped: 1210
Number of HSP's successfully gapped: 15
Length of query: 211
Length of database: 15,399,855
Length adjustment: 96
Effective length of query: 115
Effective length of database: 11,555,919
Effective search space: 1328930685
Effective search space used: 1328930685
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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