ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf94m06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os03g03860:12003.t00267:unspliced-genomic expressed protein 31 0.26
2LOC_Os02g24190:12002.t02116:unspliced-genomic cyclin-depende... 36 0.27
3LOC_Os03g62110:12003.t05438:unspliced-genomic nicotinate pho... 35 0.70
4LOC_Os07g32590:12007.t02941:unspliced-genomic methionine ami... 29 1.8
5LOC_Os12g41030:12012.t03780:unspliced-genomic ethylene-respo... 33 1.8
6LOC_Os11g09960:12011.t00888:unspliced-genomic expressed protein 33 1.8
7LOC_Os07g47030:12007.t04339:unspliced-genomic expressed protein 33 1.8
8LOC_Os10g37850:12010.t03043:unspliced-genomic armadillo-repe... 25 1.9
9LOC_Os03g16420:12003.t01426:unspliced-genomic retrotransposo... 27 2.0
10LOC_Os04g46010:12004.t04133:unspliced-genomic tetratricopept... 25 2.2
11LOC_Os05g51860:12005.t04611:unspliced-genomic conserved hypo... 27 2.4
12LOC_Os08g07970:12008.t00685:unspliced-genomic transcription ... 33 2.5
13LOC_Os07g10300:12007.t00904:unspliced-genomic expressed protein 33 2.5
14LOC_Os06g07090:12006.t00593:unspliced-genomic AP-1 complex s... 33 2.5
15LOC_Os03g64200:12003.t05631:unspliced-genomic ATPase, couple... 33 2.5
16LOC_Os01g60490:12001.t05430:unspliced-genomic OsWRKY22 - Sup... 33 2.5
17LOC_Os11g14800:12011.t01311:unspliced-genomic hypothetical p... 32 4.7
18LOC_Os01g67420:12001.t06099:unspliced-genomic triacylglycero... 32 4.7
19LOC_Os01g63290:12001.t05698:unspliced-genomic sialin, putati... 32 4.7
20LOC_Os04g14510:12004.t01270:unspliced-genomic PHD-finger fam... 26 5.5
21LOC_Os11g44390:12011.t03967:unspliced-genomic transposon pro... 25 5.6
22LOC_Os11g37730:12011.t03313:unspliced-genomic glutathione S-... 31 6.5
23LOC_Os09g07154:12009.t003579:unspliced-genomic expressed pro... 31 6.5
24LOC_Os06g51240:12006.t04807:unspliced-genomic expressed protein 31 6.5
25LOC_Os06g33450:12006.t03042:unspliced-genomic DNA binding pr... 31 6.5
26LOC_Os12g44360:12012.t04102:unspliced-genomic sodium/hydroge... 25 7.1
27LOC_Os12g26044:12012.t004177:unspliced-genomic expressed pro... 30 8.2
28LOC_Os12g24170:12012.t02146:unspliced-genomic BGAL9, putativ... 31 8.9
29LOC_Os11g46080:12011.t04133:unspliced-genomic NB-ARC domain ... 31 8.9
30LOC_Os11g37000:12011.t03244:unspliced-genomic dnaJ domain co... 31 8.9
31LOC_Os08g29760:12008.t02729:unspliced-genomic expressed protein 31 8.9
32LOC_Os06g37790:12006.t03474:unspliced-genomic hypothetical p... 31 8.9
33LOC_Os06g35900:12006.t03287:unspliced-genomic brassinazole-r... 31 8.9
34LOC_Os06g28194:12006.t02522:unspliced-genomic phosphoglucomu... 31 8.9
35LOC_Os01g52490:12001.t04676:unspliced-genomic 40S ribosomal ... 31 8.9
36LOC_Os01g10840:12001.t00957:unspliced-genomic shaggy-related... 31 8.9
37LOC_Os01g01780:12001.t00074:unspliced-genomic limonene cycla... 31 8.9

>LOC_Os03g03860:12003.t00267:unspliced-genomic expressed protein|
          Length = 5337
 Score = 31.3 bits (62), Expect(2) = 0.26
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = -2 / -3

                                                
Query: 190  LPRLLSCLRHMKTRCHPNSL*KALFPCPSKHPRLQR 83
            LP L   LR  + R  P +   AL PC  +HPRL R
Sbjct: 3877 LPPLPLLLRRWRWRPAPVAFLLALQPCSGQHPRLLR 3770



 Score = 26.7 bits (52), Expect(2) = 0.26
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1 / -1

                                  
Query: 608  EFDTLTHKKKTSNLHASTKHCH 543
            +F  L H K T  LH+ T  CH
Sbjct: 5250 KFSILQHTKLTDILHSPTPPCH 5185



to top

>LOC_Os02g24190:12002.t02116:unspliced-genomic cyclin-dependent protein kinase, putative, expressed|
          Length = 11209

 Score = 35.9 bits (72), Expect = 0.27
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2 / -2

                                            
Query: 280  PTTPGMSHNPQIVICMSSQNPRSPYVHHYPLP 185
            P++P   H PQ+   +SS +P +P +  YPLP
Sbjct: 2769 PSSPPHQHRPQLHRLLSSPSPSAPPISVYPLP 2674



to top

>LOC_Os03g62110:12003.t05438:unspliced-genomic nicotinate phosphoribosyltransferase, putative, expressed|
          Length = 6770

 Score = 34.5 bits (69), Expect = 0.70
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3 / -1

                                      
Query: 15  QQRQHHEASEPKHGSLQQCPIILRCRR 95
           +QR+HH    P+H S    P+  RCRR
Sbjct: 173 EQRRHHRVRRPRHPSSAPRPVRRRCRR 93



to top

>LOC_Os07g32590:12007.t02941:unspliced-genomic methionine aminopeptidase 1B, chloroplast precursor, putative,|
           expressed
          Length = 4335

 Score = 28.6 bits (56), Expect(2) = 1.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2 / +1

                           
Query: 307 LSLVQGCPRPTTPGMS 260
           L+L  GCPRP TP M+
Sbjct: 43  LALSVGCPRPPTPSMA 90



 Score = 26.3 bits (51), Expect(2) = 1.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2 / +2

                               
Query: 121  LFPCPSKHPRLQRRIIGHC 65
            LFPC   H  LQ ++ G C
Sbjct: 1199 LFPCCLSHQLLQMKLTGKC 1255



to top

>LOC_Os12g41030:12012.t03780:unspliced-genomic ethylene-responsive transcription factor 9, putative|
          Length = 423

 Score = 33.1 bits (66), Expect = 1.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2 / -2

                         
Query: 251 WIMRHAWCCWAWTP 292
           W  RH W CW W P
Sbjct: 398 WSRRHPWWCWCWPP 357



to top

>LOC_Os11g09960:12011.t00888:unspliced-genomic expressed protein|
          Length = 3982

 Score = 33.1 bits (66), Expect = 1.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2 / +2

                                   
Query: 197  MMNIWRTWVLRAHANHYLWIMRH 265
            M+  W  W L+A+A H +W+ RH
Sbjct: 2582 MLGSWINWELKAYALHLVWLGRH 2650



to top

>LOC_Os07g47030:12007.t04339:unspliced-genomic expressed protein|
          Length = 8306

 Score = 33.1 bits (66), Expect = 1.8
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -3 / +3

                                 
Query: 534  NSGRPREKMTWCPSILSLMEC 472
            NS  PR K  WCP+ LSL+ C
Sbjct: 2718 NS*SPRVKSPWCPADLSLLSC 2780



to top

>LOC_Os10g37850:12010.t03043:unspliced-genomic armadillo-repeat containing protein, putative, expressed|
          Length = 2402

 Score = 25.4 bits (49), Expect(3) = 1.9
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = +2 / +1

                                                  
Query: 107  RAWKQRLSKGIWMAPCFHMAKTTQQSRKGVMMNIWRTW 220
            R+  +R S G WM      A+T +   +      WR W
Sbjct: 946  RSGTRRRSTGRWMGSSTRYARTRRACCRRSAAATWRRW 1059



 Score = 23.5 bits (45), Expect(3) = 1.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2 / +1

                       
Query: 260  RHAWCCWAWTP 292
            R AWC WA +P
Sbjct: 1636 RTAWCRWACSP 1668



 Score = 23.1 bits (44), Expect(3) = 1.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3 / +3

                            
Query: 567  KVGCFLFVSQCIKLRC 614
            K+  FLF   CIK+ C
Sbjct: 2172 KLVAFLFAVNCIKIPC 2219



to top

>LOC_Os03g16420:12003.t01426:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 924

 Score = 26.7 bits (52), Expect(2) = 2.0
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2 / -2

                            
Query: 220 PRSPYVHHYPLPRLLSC 170
           PRSP   H+P  RLL C
Sbjct: 842 PRSPQSKHFPR*RLLPC 792



 Score = 23.5 bits (45), Expect(2) = 2.0
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2 / -2

                            
Query: 115 PCPSKHPRLQRRIIGHC 65
           PC    PR  RR+  HC
Sbjct: 728 PCTCSLPRR*RRLASHC 678



to top

>LOC_Os04g46010:12004.t04133:unspliced-genomic tetratricopeptide-like helical, putative, expressed|
          Length = 2685

 Score = 25.4 bits (49), Expect(3) = 2.2
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +2 / -3

                     
Query: 605 TPMPPQKKKK 634
           TP PPQKKKK
Sbjct: 481 TPPPPQKKKK 452



 Score = 24.4 bits (47), Expect(3) = 2.2
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3 / -3

                                         
Query: 339  ELMYEARTMFLSYSQRCTHIELPGCIGHR 425
            ++MY+ +  F S +Q C    L   +GH+
Sbjct: 1528 KVMYQLQIPFFSSAQMCFLFSLSS*LGHK 1442



 Score = 22.1 bits (42), Expect(3) = 2.2
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +1 / -1

                                                  
Query: 223  FASSCKSLFVDYETCLVLLGVDTLVPSSDNVPFSMP*C 336
            F  SC+SLF  ++    LL V  L   +     S P C
Sbjct: 1839 FLPSCRSLFSFFQGFFRLLRVPQLNMHTSKSCVSSPVC 1726



to top

>LOC_Os05g51860:12005.t04611:unspliced-genomic conserved hypothetical protein|
          Length = 3861

 Score = 27.2 bits (53), Expect(2) = 2.4
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -2 / -1

                                              
Query: 286  PRPTTPGMSHNPQIVICMSSQNPRSPYVHHYPLP 185
            P P +P +   P +  C SS    +   HH PLP
Sbjct: 2382 PPPPSPLLCLKPAVASCPSSSLLPAAGRHHRPLP 2281



 Score = 22.6 bits (43), Expect(2) = 2.4
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2 / -2

                          
Query: 448  PTKKTFCARCPIQP 407
            PT+   C RCP  P
Sbjct: 2495 PTRLRHCRRCPSAP 2454



to top

>LOC_Os08g07970:12008.t00685:unspliced-genomic transcription factor TGA4, putative, expressed|
          Length = 9095

 Score = 32.7 bits (65), Expect = 2.5
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +2 / -1

                                       
Query: 212  RTWVLRAHANHYLWIMRHAWCCWAWTP 292
            RTW L A A    W  R    CW W P
Sbjct: 7052 RTWALLAAAARRPWRRRRRCWCWRWCP 6972



to top

>LOC_Os07g10300:12007.t00904:unspliced-genomic expressed protein|
          Length = 5090

 Score = 32.7 bits (65), Expect = 2.5
 Identities = 15/46 (32%), Positives = 18/46 (39%)
 Frame = -2 / +2

                                                         
Query: 289 CPRPTTPGMSHNPQIVICMSSQNPRSPYVHHYPLPRLLSCLRHMKT 152
           CPRPTTP  +  P       S  P  P     P P  +S  R   +
Sbjct: 77  CPRPTTPRSTSGPAAAHSSPSPTPSRPSPAAMPTPTSISRTRRFSS 214



to top

>LOC_Os06g07090:12006.t00593:unspliced-genomic AP-1 complex subunit gamma-1, expressed|
          Length = 9984

 Score = 32.7 bits (65), Expect = 2.5
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -1 / -3

                                                          
Query: 467  HYTLHETYKENILRSVSYTTG*FNMGTPLRIGKEHRPSFIHQLKHY 330
            H TLH  Y  NI+ S+       N+GT L     H+ S  H+ K +
Sbjct: 2053 HQTLHFQYSANIISSLPINHDHRNLGTVLHSQLSHQTS*NHRTKDF 1916



to top

>LOC_Os03g64200:12003.t05631:unspliced-genomic ATPase, coupled to transmembrane movement of substances, putative,|
            expressed
          Length = 5162

 Score = 32.7 bits (65), Expect = 2.5
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +2 / +2

                     
Query: 266  AWCCWAWTP 292
            +WCCW+WTP
Sbjct: 4838 SWCCWSWTP 4864



to top

>LOC_Os01g60490:12001.t05430:unspliced-genomic OsWRKY22 - Superfamily of rice TFs having WRKY and zinc finger|
            domains, expressed
          Length = 3980

 Score = 32.7 bits (65), Expect = 2.5
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2 / -3

                                                
Query: 124  ALFPCPSKHPRLQRRIIGHC*REPCFGSEASWCCLC 17
            ++FP P    R +R+  G   R+PC   +  WC +C
Sbjct: 3618 SVFPPPVPFSRRRRQSAGFAWRKPCNRRQNCWCRMC 3511



to top

>LOC_Os11g14800:12011.t01311:unspliced-genomic hypothetical protein|
          Length = 1048

 Score = 31.8 bits (63), Expect = 4.7
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2 / +1

                                         
Query: 428 AKCFLCRFHAKYSVSHSMSDNMLGHQVIFS 517
           + C+  R HA+YSV+  M+D   GH+ + S
Sbjct: 418 SSCYRHRAHAEYSVTIIMTDTRFGHKQLSS 507



to top

>LOC_Os01g67420:12001.t06099:unspliced-genomic triacylglycerol lipase, putative, expressed|
          Length = 7577

 Score = 31.8 bits (63), Expect = 4.7
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2 / +1

                                         
Query: 634  FFFFLGGHRSLIH*LTKRKHPTFMHQLNI 548
            FFFFLGG  +++ *L K+K     H L++
Sbjct: 2656 FFFFLGGGGAMLF*LHKKKRDYAAHVLSV 2742



to top

>LOC_Os01g63290:12001.t05698:unspliced-genomic sialin, putative, expressed|
          Length = 8085

 Score = 31.8 bits (63), Expect = 4.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2 / -1

                                        
Query: 256  NPQIVICMSSQNPRSPYVHHYPLPRLLS 173
            NP I+IC +  +P   Y H + +P LLS
Sbjct: 2340 NPTIIICKNCFHP*KKYYHSFLIPGLLS 2257



to top

>LOC_Os04g14510:12004.t01270:unspliced-genomic PHD-finger family protein, expressed|
          Length = 8878

 Score = 26.3 bits (51), Expect(2) = 5.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2 / +2

                                     
Query: 466  TILCMKPTKKTFCARCPIQPGSSIW 392
            T  C+  TK+T C +     GSS+W
Sbjct: 8096 TWFCILVTKETTCIQLYANIGSSVW 8170



 Score = 22.1 bits (42), Expect(2) = 5.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3 / +2

                           
Query: 543  HKINSGRPREKMTWC 499
            HK+NSG P   ++ C
Sbjct: 7952 HKVNSGPPGADLSEC 7996



to top

>LOC_Os11g44390:12011.t03967:unspliced-genomic transposon protein, putative, unclassified|
          Length = 7245

 Score = 24.9 bits (48), Expect(2) = 5.6
 Identities = 11/44 (25%), Positives = 20/44 (45%)
 Frame = -1 / +3

                                                        
Query: 224  KPTFAICSSLPPSETVELSSPYENKVPSKFPLKGAVSMPFKTSS 93
            +P +  C++ PP+ T+ L  P           +  +S+P   SS
Sbjct: 3072 RPPWPACAAQPPAPTLPLPPPLRRSARVSKTRRQHLSLPRALSS 3203



 Score = 23.5 bits (45), Expect(2) = 5.6
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -2 / +2

                                                  
Query: 322  KKEHCLSLVQGCPRPTTPGMSHNPQIVICMSSQNPRSP 209
            ++E  LSL    P   +  +S  P  V  +++QNP  P
Sbjct: 2906 RRERALSLSLFLPLSLSRFLSRAPTPVPAVAAQNPPPP 3019



to top

>LOC_Os11g37730:12011.t03313:unspliced-genomic glutathione S-transferase theta-1, putative, expressed|
          Length = 4410

 Score = 31.3 bits (62), Expect = 6.5
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3 / -3

                                                 
Query: 426  LGVLYNRVVQYGYTFENRKGTSSELHTSTQTLWHRKR 316
            +G+LY  V++YG T ++R  T   L ++   LW R +
Sbjct: 1330 MGLLYYIVMKYGLTGKSRT*TFFSLASNASNLWFRHK 1220



to top

>LOC_Os09g07154:12009.t003579:unspliced-genomic expressed protein|
          Length = 2477

 Score = 31.3 bits (62), Expect = 6.5
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2 / -3

                                          
Query: 428  AKCFLCRFHAKYSVSHSMSDNMLGHQVIFS 517
            + C+L R HAKY++   M++   GH+ + S
Sbjct: 2436 SSCYLHRAHAKYTMMMIMTNTQFGHKQLSS 2347



to top

>LOC_Os06g51240:12006.t04807:unspliced-genomic expressed protein|
          Length = 3738

 Score = 31.3 bits (62), Expect = 6.5
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2 / +1

                                     
Query: 113  WKQRLSKGIWMAPCFHMAKTTQQSR 187
            W+ RLS      PC H A T  Q R
Sbjct: 2638 WRLRLSSSFGSTPCMHQASTAAQMR 2712



to top

>LOC_Os06g33450:12006.t03042:unspliced-genomic DNA binding protein, putative, expressed|
          Length = 6100

 Score = 31.3 bits (62), Expect = 6.5
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -1 / -2

                                      
Query: 614  ASEFDTLTHKKKTSNLHASTKHCHIK 537
            AS +  L+ KKK++  HAS  HC+I+
Sbjct: 1680 ASVYIPLSKKKKSNRTHASRHHCNIQ 1603



to top

>LOC_Os12g44360:12012.t04102:unspliced-genomic sodium/hydrogen exchanger 7, putative, expressed|
          Length = 14116

 Score = 25.4 bits (49), Expect(2) = 7.1
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +1 / -2

                          
Query: 496  RTPGHFLSRSATVY 537
            RTPG+F SR AT Y
Sbjct: 6180 RTPGNFCSRFATGY 6139



 Score = 22.6 bits (43), Expect(2) = 7.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3 / -2

                          
Query: 372  SYSQRCTHIELPGC 413
            SY+Q  T++ +PGC
Sbjct: 6306 SYNQGHTYMHVPGC 6265



to top

>LOC_Os12g26044:12012.t004177:unspliced-genomic expressed protein|
          Length = 2377

 Score = 29.9 bits (59), Expect(2) = 8.2
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +2 / -1

                            
Query: 584 FCESMYQTPMPPQKKKK 634
           F E+   TP+PPQKKKK
Sbjct: 286 FFEAQIITPLPPQKKKK 236



 Score = 21.7 bits (41), Expect(2) = 8.2
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +2 / -1

                        
Query: 194  VMMNIWRTWVLR 229
            ++MNI +TW+LR
Sbjct: 1420 MIMNIKQTWLLR 1385



to top

>LOC_Os12g24170:12012.t02146:unspliced-genomic BGAL9, putative, expressed|
          Length = 20845

 Score = 30.9 bits (61), Expect = 8.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2 / -2

                              
Query: 113   WKQRLSKGIWMAPCFHM 163
             W+++LSK +   PCFH+
Sbjct: 10563 WQEKLSKSVHFLPCFHL 10513



to top

>LOC_Os11g46080:12011.t04133:unspliced-genomic NB-ARC domain containing protein, expressed|
          Length = 6850

 Score = 30.9 bits (61), Expect = 8.9
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3 / -1

                                      
Query: 303  LRQCSFFYAIMFELMYEARTMFLSYS 380
            LRQ SFF+   F L Y    +FL YS
Sbjct: 3598 LRQYSFFFNFEFSLFYMDSRLFLQYS 3521



to top

>LOC_Os11g37000:12011.t03244:unspliced-genomic dnaJ domain containing protein, expressed|
          Length = 4355

 Score = 30.9 bits (61), Expect = 8.9
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2 / +2

                                 
Query: 262 SHNPQIVICMSSQNPRSPYVHH 197
           +H+P + +C SS+N  +P  HH
Sbjct: 8   THSPHLCLCSSSKNLTTPTAHH 73



to top

>LOC_Os08g29760:12008.t02729:unspliced-genomic expressed protein|
          Length = 7877

 Score = 30.9 bits (61), Expect = 8.9
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -2 / -3

                                                            
Query: 274  TPGMSHNPQIVICMSSQNPRSPYVHHYPLPRLLSCLRHMKTRCHPNSL 131
            T   + NP I + +  +NP  P     P    ++      T CHPNS+
Sbjct: 1722 TDDFASNPMIKVSIGMKNPPPPTPPILPNAAPMNPTNDPSTICHPNSI 1579



to top

>LOC_Os06g37790:12006.t03474:unspliced-genomic hypothetical protein|
          Length = 3180

 Score = 30.9 bits (61), Expect = 8.9
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = -2 / +3

                                              
Query: 289 CPRPTTPGMSHNPQIVICMSSQNPRSPYVHHYPLP 185
           C  PT    S +P  VIC SS N  S   H  PLP
Sbjct: 219 CRLPTQRPPSPSPNPVICNSSFNNSSGSEHFAPLP 323



to top

>LOC_Os06g35900:12006.t03287:unspliced-genomic brassinazole-resistant 1 protein, putative, expressed|
          Length = 3156

 Score = 30.9 bits (61), Expect = 8.9
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -1 / -1

                                           
Query: 245 SDLHELAKPTFAICSSLPPSETVELSSPYENK 150
           ++  E A+   A+ S + P+E VE +SP +NK
Sbjct: 615 TETEEAAETQIAVASRIAPAEVVEGTSPNDNK 520



to top

>LOC_Os06g28194:12006.t02522:unspliced-genomic phosphoglucomutase/phosphomannomutase family protein, putative,|
             expressed
          Length = 21531

 Score = 30.9 bits (61), Expect = 8.9
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +2 / +1

                                                    
Query: 164   AKTTQQSRKGVMMNIWRTWVLRAHANHYLWIMRHAWCCW 280
             + TT  SR  V   +    V++   NH L I RH   CW
Sbjct: 13633 SSTTNTSRLPVFARVIVIGVIKNKKNHNLIICRHFMSCW 13749



to top

>LOC_Os01g52490:12001.t04676:unspliced-genomic 40S ribosomal protein S24, putative, expressed|
          Length = 1837

 Score = 30.9 bits (61), Expect = 8.9
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2 / +2

                                 
Query: 224  LRAHANHYLWIMRHAWCCWAW 286
            ++ H + Y W+  H W  W W
Sbjct: 1535 VKTHLHLYYWLWEHCWV*WQW 1597



to top

>LOC_Os01g10840:12001.t00957:unspliced-genomic shaggy-related protein kinase eta, putative, expressed|
          Length = 4186

 Score = 30.9 bits (61), Expect = 8.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2 / -1

                          
Query: 251  WIMRHAWCCWAWTP 292
            WIM H WC   W+P
Sbjct: 3823 WIMEHGWCNLRWSP 3782



to top

>LOC_Os01g01780:12001.t00074:unspliced-genomic limonene cyclase like protein, putative, expressed|
          Length = 3239

 Score = 30.9 bits (61), Expect = 8.9
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3 / -2

                                       
Query: 105 EGHGNSAFQREFGWHLVFIWRRQLNSLG 188
           EG G      E GW LV +WRR+    G
Sbjct: 298 EGSGGWEAAAESGWLLVLLWRREARRYG 215


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 309,268,962
Number of extensions: 5608465
Number of successful extensions: 22637
Number of sequences better than 10.0: 37
Length of query: 211
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 163
Effective length of database: 52,912,542
Effective search space: 8624744346
Effective search space used: 8624744346
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
to top