ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf94m06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q6FMI5:LYS2_CANGA L-aminoadipate-semialdehyde dehydrogenase larg... 31 3.3
2Q4JBK2:COBS_SULAC Cobalamin synthase - Sulfolobus acidocaldarius 31 3.3
3P49920:CBG_SHEEP Corticosteroid-binding globulin precursor - Ovi... 31 3.3
4Q12572:LYS2_CANAL L-aminoadipate-semialdehyde dehydrogenase larg... 30 9.7
5Q5R5G4:CQ080_PONPY Uncharacterized protein C17orf80 homolog - Po... 30 9.7

>Q6FMI5:LYS2_CANGA L-aminoadipate-semialdehyde dehydrogenase large subunit - Candida|
           glabrata (Yeast) (Torulopsis glabrata)
          Length = 1374
 Score = 31.2 bits (69), Expect = 3.3
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -1

Query: 497 LAYYHSWNATHYTLHETYKENILRSVSYTTG*FNMGTPLRIGKE 366
           LAYY SW A  + L E  K  +L  +++     +M TPL +G +
Sbjct: 424 LAYYFSWMAKQFNLSENDKFTMLSGIAHDPIQRDMFTPLFLGAQ 467



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>Q4JBK2:COBS_SULAC Cobalamin synthase - Sulfolobus acidocaldarius|
          Length = 252

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 434 ILRSVSYTTG*FNMGTPLRIGKEHRPSFIHQLK 336
           I+R   +  G  +MG  L +GKE RP  +H L+
Sbjct: 72  IIRGFHHLDGLLDMGDALMVGKERRPQVLHDLQ 104



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>P49920:CBG_SHEEP Corticosteroid-binding globulin precursor - Ovis aries (Sheep)|
          Length = 430

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +1

Query: 7   PRLSRDNTMKLLSQSMAPFNNVQLFFVADEDVLKGMETAPFKGNLDGTLFSYGED 171
           P + + NT+K L+ S+ P   VQL +  +E V       P KG +D  + +   D
Sbjct: 231 PMMFQSNTIKYLNDSVLPCQLVQLDYTGNETV---FFVLPVKGKMDSVITALSRD 282



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>Q12572:LYS2_CANAL L-aminoadipate-semialdehyde dehydrogenase large subunit - Candida|
           albicans (Yeast)
          Length = 1391

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -1

Query: 497 LAYYHSWNATHYTLHETYKENILRSVSYTTG*FNMGTPLRIGKE 366
           LAYY  W A  + L E  K  IL  +++     +M TPL +G +
Sbjct: 433 LAYYFPWMAKRFRLSEKDKFTILSGIAHDPIQRDMFTPLFLGAQ 476



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>Q5R5G4:CQ080_PONPY Uncharacterized protein C17orf80 homolog - Pongo pygmaeus|
           (Orangutan)
          Length = 609

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = +1

Query: 37  LLSQSMAPFNNVQLFFVADEDVLKGMETAPFKGNLDGTLFSYGEDNSTVSEGG 195
           +LS  M+    +Q+    ++ +  G+ET   KGN + ++ + GE   TV   G
Sbjct: 279 ILSLKMSSLGKIQVMEKQEKGLTLGVETCGSKGNAEKSMSATGEQEWTVMSHG 331


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 128,092,601
Number of extensions: 3067512
Number of successful extensions: 7250
Number of sequences better than 10.0: 5
Number of HSP's gapped: 7250
Number of HSP's successfully gapped: 5
Length of query: 211
Length of database: 100,686,439
Length adjustment: 108
Effective length of query: 103
Effective length of database: 71,062,579
Effective search space: 7319445637
Effective search space used: 7319445637
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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